Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057110 ID=TCONS_00057110|Name=TCONS_00057110|organism=Clytia hemisphaerica|type=transcript|length=796bp ttagacgattaaaaatatgaaatactaAAACAATTTTAACTTActtaaaa gaatgaaaatatgatggccaatgaaaatgaagaatgtTGGAAACAATGAA AACATAATGGTCGCAAACAGAGAAGAGACAATAAACAAAGAAGAAGTGAA ATCTCCTCCTCaatcctcctcctcctcctcctcctccgaagtgtcaaaaa aagataaaagccAAAAACACCAAGAAGCCACTGTAATGCAATCTCTTTCT CAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGAAATGCAAGC ATGTCAACAAAAAACTGTAGTAGAACCTCCTCAATCTTTCGAAGAAGAAG TTGAAATACACGATGAAAGCCAAAAATACCAAGAAGTCACTGAAGTGAAA CCTCCTCCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGA AATCCATCAACACCAGCAAGTCACTGTAGTAGAACCTCCTCAATCTTCCG AAGCAGAAGAAGTGGTTTCAAAACACGATGAAGGAGGTCAAGAAAACCAA GGAAACATTCAATCCGAAGCCCAAGGTTCAGATACTGATAATGttgtgtt GGAGGTGGGAGAACAACATCAAATTATTGTTCAACAGAATGACCAAGAGC TCatcttttacgtcacttacgaAGAGGATGTAGAAGTAGAAGAAGAAGGA CAACCAAACTGTGGCGATGGAGAATATGGTGGAACTCCAGTCGAACAGAT TCTCCTGTTCGATCCAACCAAACCTCTCCAGCATCATCGTGTAGAC Run BLAST on NCBI transcript from alignment at scaffold_285:295005..298253- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057110 ID=TCONS_00057110|Name=TCONS_00057110|organism=Clytia hemisphaerica|type=transcript|length=3249bp|location=Sequence derived from alignment at scaffold_285:295005..298253- (Clytia hemisphaerica) TTAGACGATTAAAAATATGAAATACTAAAACAATTTTAACTTACTTAAAA
GAATGAAAATATGATGGCCAATGAAAATGAAGAATGTTGGAAACAATGAA
AACATAATGGTCGCAAACAGAGAAGAGACAATAAACAAAGAAGAAGTGAA
ATCTCCTCCTCAATCCTCCTCCTCCTCCTCCTCCTCCGAAGTGTCAAAAA
AAGATAAAAGCCAAAAACACCAAGAAGCCACTGTAATGCAATCTCTTTCT
CAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGAAATGCAAGC
ATGTCAACAAAAAACTGTAGTAGAACCTCCTCAATCTTTCGAAGAAGAAG
TTGAAATACACGATGAAAGCCAAAAATACCAAGAAGTCACTGAAGTGAAA
CCTCCTCCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGA
AATCCATCAACACCAGCAAGTCACTGTAGTAGAACCTCCTCAATCTTCCG
AAGCAGAAGAAGTGGTTTCAAAACACGATGAAGGAGGTCAAGAAAACCAA
GGAAACATTCAATCCGAAGCCCAAGGTTCAGATACTGATAATGGTATGCT
ATACTTTTTTATCTTAAGGAGGGACTGTTTTATTTTTCATTTGAAATTTT
CGCTCCATTATGTTCAAGATCTCATCAAAAAACGGATCCCTGGTATTGTA
CTTTTCTTTGGGATTGGAATTATTATAAGTTTTTTCTTAGAGCAATTTAT
AAGAACAGAAGGCTAAAATATGGGCGAAAAAGATACCCTGTCCCTTCCAA
GCTTCACATCCCCGTACTTATCTCTTTTTGCCTACAAAGTACTCTTAGTT
AACGTATTACTTCGAATAAACGCCCGGGGCGTTTATTAAATCTTTTCGAT
TTTAGGAGGGGCTTTTATTCGAGGGGGTGTTTAAAAGAAGGGGGCATTTA
TTAAATTATTTGAGTCTAACGTTGAATATTTTAAAAGCAAATCTACTCTT
TGTTTTAGTTATATACCAGGATTTCAGGGCAGATTTCTTTTGGCGACTAG
AATTGCATCAAAACTGATCTGGTTACAAAAAAGACTAAAATCTTTCTTTT
CAATCCTAATCAAAACTTGTATCAAAGTATTTAAGTCACAAGTTTCTAAT
AAATGCCCCTCCCCTAGAGGGGGCGTTCATTCGAAGGGGGCGTTTATTTG
AGGGGGCGTTTGTTAAATAATTTTCCTTTTAGGAGGGGCGTTTATTTGAG
GGGGCGATTAAAAGAAGGGGGCGTTTATTCGAAGTAATACGGTAGATCTC
TCTGATTTGATCTTCAATGGGGCCAAGAATTTTCTTCAAATTAGAAAGAT
TCAAATTACCGTGAATAATTAATGATTAATAATTAAGTTTGAATTAGGGA
TTGTTAGCCGGTGTTTGTTTTTTAACGCGGTCTGTACGATTTTTTACGTA
ATACAATTGCCTCTTTTCGCATACCGACGAGCTTATACAAGTATGACTTC
AGTTATTTTCAAATAAAATGGACACTACGTTGACATCATTTCCATCTATT
TTTCATTTCTTTTTCATTTCTTTTACATTTCTTTTATCGTAAATTCACAC
AAGTCTTTCTCCATTTTAGTCGTCTTTCCCAGTATTCTCGCTATAAAGTG
CAAAAAAAAGAGACAGTTAACAAAGATATGTCTGGTTAGTGAGGGCTGCA
CTGATGAATATCGCCCGAGATGCAACAATGCTTCCGAGTCATTATTAGTA
GGGGACCAATCCTTAGGATCCGTGACATCTTTTATGCGACGCAACCGCAT
GTGGTTAGTTCGAAAGTAGGAAGGTTTTTAAGACTTTTTTGAGAGGGGGC
CCGCGAATTAGGCCCGGCAAAAGTTTTTATGACTAAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAAAAGTTTTT
ATGACTAAAAGACTGACGTTTACAGACAAAACTGTAAGGGTAAAAAATGG
GTAAAAAATTGACGTTTTTTAAAAGTCGAATTTGAAAGAAATGGATGAGA
CCATCGGAAAGAGCATACTACAGCAAGTCTCTTACTCGAACGCACGAAGA
AATACGGCCATCTAAAGTTTCAAATTCTGTCAGATGGAATACGATTGACG
CCAAATTTTGTATGTCACGGATCCTAAGGATTGGCCCCTACTATATTAGA
GTATTAGAGTTGACTGTTTTTGAAATCAATTTAAACCCTTCAAAAAACCA
TTTCCACTTTTTTTAGTTGTATTGGAGGTGGGAGAGCAACAGATTAAACC
TTTCAAAAAACCATTTCCACTTTTTTTAGTTGTGTTGGAGGTGGGAGAAC
AACATCAAATTATTGTTCAACAGAATGACCAAGAGCTCATCTTTTACGTC
ACTTACGAAGAGGATGTAGAAGTAGAAGAAGAAGGACAACCAAACTGTGG
CGATGGAGAATATGGTGGAACTCCAGTCGAACAGGTTGGTACATTACACC
TTTAACATAGCATCAACCCCCCCTGACTTTTTTTTTTTTTTGGGGGGGGG
GTTTACACCCAAAAAAATGCAAATGAAAACCGGAAGCTAAAATACAGCTA
AATATTTGGGGGGACCTGGTATGTTTGGGAGGGCCTGGAATTTCAATGGC
ATTGCTGGGGGCTGACTATAACTTTTTTCTGATTACTAGATATGCCAGAG
AAAACACCTATGAACCCTTTGTACCGCGGTCGGCTTTTTAGGGGACTGGT
AATGAATTTACAAGGAAGATTTGCTCTCGGCGCACGGCATTTTTAGGCTA
CAACTAAATCAAACCAAGCAAATTCCCACCAAAACTCTTGAAAAAGGTAT
TAACTCCTAATAGTAGGAGACAAACCCTTAGGACCCGTGACATCTTTTAT
CCGATGCAACCAAACCTGGTCCATTTGTATTTAAAGAGTTTTTTACGAGG
GGGTGGTTTCTACTGAGGCCCAGGAAAAAAATGACGTCACGGGCAAAAAA
TGGACCAAGTTTTATTACGTCGCGTGAAAGATGTCATTGGTCCTAAGGGT
TTGCCTGCAACTATCAGGAGTTAATACTTTTTTTGTTACTTAATCATTTA
GATTCTCCTGTTCGATCCAACCAAACCTCTCCAGCATCATCGTGTAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00057110-exon-scaffold_285-1575043694:297661..298253 | TCONS_00057110-exon-scaffold_285-1575043694:297661..298253 | Clytia hemisphaerica | exon |
TCONS_00057110-exon-scaffold_285-1575043694:295670..295824 | TCONS_00057110-exon-scaffold_285-1575043694:295670..295824 | Clytia hemisphaerica | exon |
TCONS_00057110-exon-scaffold_285-1575043694:295005..295052 | TCONS_00057110-exon-scaffold_285-1575043694:295005..295052 | Clytia hemisphaerica | exon |
TCONS_00057110-exon-scaffold_285-1510915933:297661..298253 | TCONS_00057110-exon-scaffold_285-1510915933:297661..298253 | Clytia hemisphaerica | exon |
TCONS_00057110-exon-scaffold_285-1510915933:295670..295824 | TCONS_00057110-exon-scaffold_285-1510915933:295670..295824 | Clytia hemisphaerica | exon |
TCONS_00057110-exon-scaffold_285-1510915933:295005..295052 | TCONS_00057110-exon-scaffold_285-1510915933:295005..295052 | Clytia hemisphaerica | exon |
TCONS_00057110-exon-scaffold_285-1491911889:297661..298253 | TCONS_00057110-exon-scaffold_285-1491911889:297661..298253 | Clytia hemisphaerica | exon |
TCONS_00057110-exon-scaffold_285-1491911889:295670..295824 | TCONS_00057110-exon-scaffold_285-1491911889:295670..295824 | Clytia hemisphaerica | exon |
TCONS_00057110-exon-scaffold_285-1491911889:295005..295052 | TCONS_00057110-exon-scaffold_285-1491911889:295005..295052 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_285 | supercontig | scaffold_285:295005..298253 - |
Blast
The following BLAST results are available for this feature:
|