TCONS_00057073 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057073
Unique NameTCONS_00057073
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1414

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057073 ID=TCONS_00057073|Name=TCONS_00057073|organism=Clytia hemisphaerica|type=transcript|length=1414bp
ttttttaaattctcattcttttcccactctttccatcttcttctttgaac
tgtaaaatgtgtgtgagagccacagggttggatagtggcgATCCAATCCG
AGTTCCTTCCCATCTAGTATGCTTTCTAcaacgttgtggcagaaacgtgt
caaaggaatggcaactttgtctagtagaaaGAAAAAGACGTTTGGTGCAA
AAGAGGTGGCGATCAAAGAAAGAACCAGACTCCAAACTGTTTGAGCAGCG
TCTCAAGGTTGCTGTCGGAAAGACCACTGGCTTGCATAGAGGTTTCAACA
TTTTCTACCGGTACCAAGTGTGGAGCAAAAATGGAAACACACGAACAGAT
CTGAAAAAACTGCCGGGAAACGACAAAGGTACTCAAACCAACAGCATCGA
GGACGAAATAAGGGAAAGGCGTGGTACTATACGgATCGAACCTGTGACAA
ACCCAGCCGTATCGCCACCCAAGTTGAGACGCACCGTCAATACCGATGTA
CCCATCGAGGGACTGCCAACGAAAAACAAGGCGAAGAAGAGGAAAGCTGT
CAATACGAAAGACGTTGTTGGTAACCATTGTCACGTATGTCATGTAACTT
TCTATTCGAAAGAGGACAAGCAATCTGGCATCAAAGGCAAAGGGTCTAGG
GTACAGAACTCCAGCATAGGGTGTATTGTGGACGGGTGTGATCACTGGGT
TCACGTACGTTGTTCTTCACTTAAGGATGTCATTGTAACAAAAGAAGACG
CAAGAGTTGCAGATTTCTTGTGCCCAAAACACAAGAAAGACCGTGAGCTA
GCTGCCTCGAAACTAAGAGTCCACAGCCAAGTGGATCAAAAACATAGATT
GTGGCTACCTTAAAGAGAGAAATTTAGGCAGGAACTTAATTCGACGTGTG
GCCGAAAACTATTTTAATTAGCTGTTCAGTGATTTTTTTGGCGGGAATCG
TTGTCGAGTAGCAAATTACCTGTTTGAAATGAATGACTTGGGGGAAAATT
TATGATAAGATTAGATTTTGCTAATTCCTCTGAAATCATTTCACTAAAGT
TTCTTTCCTTAGGGCAGCTCAGCGCTGTTGATCGATATAGACATAGGCAA
ATAATGGTTCCAAAATGTTGCCCATTACATTTTTATCCTATACTCGGTGT
TTTGTATGTAAGAGCTGTAAAATCTTAGCCGTCGGTCACCATTTTATACT
TCCACTCGCTCTTCGTGTTTTTAAGTTAAACCCTATCCATCTTAAACAAC
TAGGCCGTGAGTTTTCTTATGTAGCTTTGCTGGTTTTGGGAATAGTGAAT
ACCTTTTCGATATTATGGAAAAGTCTTATCGTCTTTTGCCAGCTTTCATT
AGTTGGAACTCCAAGTTTCGGAATCCAAAATTTGATCTTCTTGTTCATCT
CTTCCATGATAGCG
Run BLAST on NCBI

protein sequence of TCONS_00057073-protein

>TCONS_00057073-protein ID=TCONS_00057073-protein|Name=TCONS_00057073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MCVRATGLDSGDPIRVPSHLVCFLQRCGRNVSKEWQLCLVERKRRLVQKR
WRSKKEPDSKLFEQRLKVAVGKTTGLHRGFNIFYRYQVWSKNGNTRTDLK
KLPGNDKGTQTNSIEDEIRERRGTIRIEPVTNPAVSPPKLRRTVNTDVPI
EGLPTKNKAKKRKAVNTKDVVGNHCHVCHVTFYSKEDKQSGIKGKGSRVQ
NSSIGCIVDGCDHWVHVRCSSLKDVIVTKEDARVADFLCPKHKKDRELAA
SKLRVHSQVDQKHRLWLP
Run BLAST on NCBI

transcript from alignment at scaffold_285:423530..433109+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057073 ID=TCONS_00057073|Name=TCONS_00057073|organism=Clytia hemisphaerica|type=transcript|length=9580bp|location=Sequence derived from alignment at scaffold_285:423530..433109+ (Clytia hemisphaerica)
ttttttaaattctcattcttttcccactctttccatcttcttctttgaac tgtaaaatgtgtgtgagagccacagggttggatagtggcgATCCAATCCG AGTTCCTTCCCATCTAGTATGCTTTCTAcaacgttgtggcagaaacgtgt caaaggaatggcaactttgtctagtagaaagtacacttcttttttcattg ttattttagtttcttcggcgGGTTCCGTGGagtttaagttttagtttatt ttatatttgagcgcgtttcatactttcactaaacacatcttttaacatct ttttatctgtggtggtgtctagctaacactgcttggcctacctacacaac cctatttccattatataggaggatattttcacaaatggccgaaatcctgt gtaggtcagTCGAGCACACTGTCATAttttaaacgacaaaaaaatgagta atcacatcatttagcgccacgctaaacaaaagaaaaaaaagaaagatcaa aggcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNATATtttaaatgacaaaaaaatgagtaatcacatcatttagcgccac gctaaacaaaagaaaaaaaagaaagatcaaatgcttaaaacaaaaagtac ttaAAACGTTCAATAACACGTCAtggtgaaaacaaaaatacgaTATTCGT TTAGCGGCTCTTATAAGGAACACATTGATATATATTTCTGCTACCCCACA ACTTGCaatcgaaaaattgagcaaaatattgaaaatagttttttcaaact tcctTATAAAAATCTCATGTTTGGCACTCCTACACGGTAGAAAAAGTGAA GAGATGAGAAATATGACGTAAACACAATGTAAGTAGTAATTATATTCCCA AGTGATTACGAGAACTCATTCTTTAAACAATGGTAAGTATTTTATTACGT TTAACAAAGGAAAACACGAAGTCCATTTCTTTCGTGGATATGCATAAAAA TTATGTAAGTACATCATGaagaaatttttacattttactgTGTGAGAGTT GTATGAGTGGCTGCTTCCATGATGAcgggaaatttgttgaaagttaAGTT GACAAGAGCAAAAGTCTACAAAGGTAttcttttgttgaatttttgcaTTC TAACTGATTTGTAATGGTTACATTGTTTTACTTCTAATAACAAAGCGAAA TATTTAATCTTTATCTAGCTTGCCTCGTCAGTTTGAAGGAAATAATTTGA TAGACCATTTGACCATAACCAGGGGGTACTAAAATAATTCATCTTGTATA TCCGATATATCCGTGACCCAACGGGTTTTGTTTGTACTTACTGGAAACAG AAGAGGAGTGCAGTTTAGGATTTCTGAGCTTTATTCTCACTGGCGTTTTT TTTCCAGATGTGCCCTAAAAGGGGGCTCCAACGTGGCTATGAGATAGGGG CGTCACAAAAGGCATTTAAATTTCTTGTGTACCGCAAGCTAAAAGGAGGG CGTTAAGAATCAGTGTCATTATAAATTTATTGATATCGGCTAGAAGTTTa ctttacacccctgtctcagtttTGAAAACCACCAGGGTCACTCTGAAAAT AGTTGCATTTCACGGGGTCTGATTTTCGAGGTCCTAAGGTTTCACTTGGG TAAGAATTTTCACTGTTGAAATGAACAACAAGTTTATCAAAATTCCCGAT TGTAGATAGGGTTTTGCTGTTTACAGTACTTTAGTTGCCAGTTTGAGCCt cgaaattgttcttatcctgtctTGGAACAACGAATTTAACAGTTTTTGTG GACTTGGGGTCTCGGAGGTTATTGTTGATGCCTTAAGCATGATCTTTTTG ACATGAGATGTAATTTTATAATTTGCATCTAATTTCAGGAAAAAGACGTT TGGTGCAAAAGAGGTGGCGATCAAAGAAAGAACCAGACTCCAAACTGTTT GAGCAGCGTCTCAAGGTTGCTGTCGGAAAGGTAGGTTTCTATTTTAATAT ATTGATTAAGAAAAACAGTGAAATATCTGCTACAAAATTATTGCTCAACA TCCATATCGACAACATCGTCGACAACAGGAAATCCGTTCAGGTTCTTCAG AAAGtttttgtacattttctttttcttgccaCATACATTTTCATGGAATT TCTCATATAAATCCTGGTCGTTACGTTCTTCCAAGATTTCCACAATTTTG GCTTCAATTTGACTAAAATATCAATATTGGTTCTTGTTTATAGTGCACAG GTTTTTGCAGTTGTTGTAGATATCTAGTGTAGATAGTCACTCATTAGATA CTGATTTTACAACACACATGTCCTAGGTTTAgttttgtattgttgtaaag gctggAATAAGTTTACAACTTAGCGTACTGTTGCTTTGCCTGTACACCcg gtatctacggctaatttcaaaattcaaaacgaaACGAAAATCGTGAGATA CAGAGTAAACGTTGCTAGGTATTCTTTTTAATTAAGACTTTATTTAATAT TGAGTCGACACTTAGACCACTTATGATGCAaagcaaaattgaaatttacc tCTTTTTAAGCGAGTCAATTTCTTGACCTTTCTTCAGGTCATCTTCGGTA ACGAATATGTACCTATAGGCGAAAAAAAACTCATCAGATCTGGAAGGGAG GGAAAATTGCTAGGTGCGGTCTTGATTATAGAAAACATATAAGTCAatta tgatattttttcaatttttcagtaGTTAGGCATACCTACCTCATAGATTT TTGTTCCCCTGTTCGTAGAAAACTGAGTGATTCAGCTTTTGCCTGCTTAG CATACACTTCTAAACTCATCAATTCTTCTGTTAAGGCGGTGCTGTTATCT AACGACGATAATGTGCCAGTGCGATCTGTtaataaaagtaataatttAAA ATCTCATTGAATCATCAGAATGCCGGATTACATCTTGCTCAATAAACGAT TTAATGCTTTAAGCCTTTGCCTTTGCCTTTCACGTGGCTAGTCTCCAAGG AAGAATAAATCTCAGACTCACCCAAAAAATTGAACTCCCTGATCAAGCAT CTAATGAGGAGAACAAGGTCTTCAGAGGTACGCTTGCTGGTGTTTAGGGT CTGTTCGTACATTTTGTCCTCTTCTGTACATCCACTGAATGACAGGAGAT TCTCTCTAAGCTGGAAGAGAAGTAAATTATGTAAGTCCATCTTGCATTTT ATAGACCACTGGCTTGCATAGAGGTTTCAACATTTTCTACCGGTACCAAG TGTGGAGCAAAAATGGAAACACACGAACAGATCTGAAAAAACTGTCGGTA AGGAAATTTAATTGTTTCGTTCTGTCCAGGCTAAGCTGACAGTTGTATGT CTGCTAAAAGGTTCCACAATCCCATGTTCATGACGCCTATCATGTAACGT TGACACAACcgtgcctcacagccccggtggaacttttttacACAGTGGGA TAAGAATTGTATTGTTCCCAATTTTTACCATAGAACTTCGAGGGGATAAA ATCCAAGTCAATTTCCCTATGGGTTTCAAATTGTAAGGTGTTGAAACGGG GACAAAATTTCGGTGTGTTTTAGGTGAACGTTGAATGGGCGTGATTGTCA GATGTTGTGTTTCGGAAAAATCCATCTGTTTATAGTCACATTTATAGTTT TAAAATCTTTGTTCTTGTGTCACTTTAAGGGAAACGACAAAGGTACTCAA ACCAACAGCATCGAGGACGAAATAAGGGAAAGGCGTGGTACTATACGggt aaatatttatttatatctCCTACATCATCGTATTTCATACTTGCGAAGCA AGGTCATAGGTCTACAAAATGGAGATTAAGCAATCACCATGCACGGAGAA ATTCACTCACTCTGCACACTGTAATAAGCTATTACCTTCAAAGAAGAGAT TTTGGCgcaaatttaatttggcggctagcggaaaaaataaattttggcgg aaacttaatttggcggatgtcgccaattttttttccaccTAAATTTCTTC CTTTCAGGTAGTTATTTGTTATgattaaaaatttgatttaaaagggAAAT CACCAATTTAAGCCTGCTGTATTCATAAGTATTCTttatgtttcgaaaaa aaaaacacaggtAAAATTGGCCACGGTGAGCGCAATTGTCCTGGAGAAGA AATACTGTCATCCCTATTAGTAAGTTAGATGGGGATAAACTATGTCACAT CTCTTCTTACAGATCGAACCTGTGACAAACCCAGCCGTATCGCCACCCAA GTTGAGACGCACCGTCAATACCGATGTACCCATCGAGGGACTGCCAACGA AAAACAAGGCGAAGAAGAGGAAAGCTGTCAATACGAAAGACGTTGTTGGT AACCATTGCAGAGGCGGATCTGGGAtttttctgagggggttcaaaaatct cttttcaaaaaattttttgcggaACAAACGTTTTGGGCGTAAATTTTGCA CCCGCCCTGCTTGGGCGGTGTCAcgttttttccattcaacatgggggacg ttaatgagcgcctgcgggggaccattcaaaaagtacgttcgtaaagtacg ctcgaaaatggcaaatttttgactccccCTCCCCCCGTGTACGCTTTGTG TACGGGCGTACGTACGCTTTTCAGTACACCCCCTTAATCAAAGTCGAAAC TTGtaactcttgtaacagtagaatatgtaggtatccaatcgtatttataa caaagtctcaagaaattaaaagaatctataagatgaacaaaaataccaaa ggagaaatgaaaaataacaatcgcaaaaaccattttttgatgggaaaata ttgcgtttttctctcaaaaaagacagtttaggaaaaattacgagcgtacg tacttctcctcaaggacccccctccccctcgtacgTTTTTGGGAGTACCC CCCCTCTCGaacgtacgtactttttgaatggtcccatgCGTTGAACGGAG GGCGGTAGGCCAATTTTTTGACCCGGCTTGAACAGCCAGATGCTGAACGT GTAATAatcgtttgtggtgatattcatatatacattgggaaattccctca ctgcaattgcgcacatctagtttcttcttttcaatcttatcacacaaaac gttcataaaacgcAAATATAGGtagtattatatttcttatattttctgta tttttttggtttaaccttttattttgataaaacagacaccCAGAGCATGC TCAGAACTGCTTGTTTGGTGTATATTCGTTTATATATTCATTGTTCTtgc agaaaatctttttgagaaagccatagataaaagtgcaaataaatggtttt gaagaaaagtttgaaggaaaaataagacaatttataatattaaatatttt aacacacttcagtttcatttcgtgaatatttaaaacatagtaaaaaagtt cgataatttattcttataaccattttttatggaatttctttATAGTgaat taattggctgacaatcaagcaaaaacctttcatgttgagtatgtttacat tataaaaccagaaatggataatattctgaaaacagtgatcaagttaaaaa ataaaggagattatttatataatacataCAAGGAAATACAATATTCTTga gatggaaaaataaaagattgccaaaaagtggagtacaccatgagtactga tataatgtattttatgtgcaaatagactcaagaaattctagctctcaaat tagatgaataatcgtcagccgtgcaaaattaatcgaatctgattggttta gaggagtgcgattaatcgttaattgcactattaccactttttgcactctt cggcggggggacacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Ngttacaatagcttcttttaattgaaaacaaagaaaaattacactgcaat gttttctttttaaacaaaagaaaaaaggaggttttcgaatgtttacaaaa atataacagttagaaaaagattctttttcaaaactatgatttactaatga ttatttactgacgattacctcggaatcgtatgttttgtcgtgcaattaac gattaatcactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNatcactcgtaacaaaggagaaaataccgtaatttgcactcgtc cttcggactcgtgcaaattactattttctcctttgttactcgtgattaaa cgttaattgcactccaaaccatacgattactagtactaatctcataaaaa agtactttttacattaaaagtaaaaagtttgatgtttttaagcattatta aaggaactaacagtaatcatcaacaatctgtaggaaagcactttttcaac tttcacaattgtatggagtgttgtttataattcttttggtagagattgtt gttatatatCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNAGTactctcagagaaaattcataaaatggggggtcattatta actgattttggggtgattttcccaaaaaactcaaggaaaatgaaggtttg gcactttatcagaaaaatttgataaatttgaggtcattacaaaatgctaa ttgggtgatgttttccaaaaaattgcaaaatgtccaCCTATAATTAAGCA CaagagggtaattttttcagaggtcaccaatgtctctttttgtaCCGTAA GTtcgtctaatttcgacatccgtcttctaatttcgacatccttctttata gataggaataataagaaggtcgaaatcactgatagactaaagatttttcc tctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNGACCACTGGCTTGCATAGAGGTTTCAACATTTTCTACCGGTACCAAGT GTGGAGCAAAAATGGAAACACACGAACAGATCTGAAAAAACTGCCGGTAA GGAAATTTAATTGTTTCGTTCTGTCCAGGCTAAGCTGACAGTTGTATGTC TGCTAAAAGGTTCCACAATCCCATGCTCGTGACGCCTATCATGTAACGTT GACACAACcgtgcctcacagccccggtggaacttttttacGCAGTGGGAT AAGAATTGTATTGTTCCCAATTTTTACCATAGAACTTCGAGGGGATAAAA TCCAAGTCAATTTCCCTAGGGGTTTCAAATTGTAAGGTGTTGAAACGGGG ACAAAATTTCGGTGTGTTTTGGGTGAACGTTGAATGGGCGTGATTGTCAG ATGTTGTGTTTCGGAAAAATCCATCTGTTTATAGTTTTAAAATCTTTGTT CTTGTGTCACTTTAAGGGAAACGACAAAGGTACTCAAACCAACAGCATCG AGGACGAAATAAGGGAAAGGCGTGGTACTATACGggtaaatatttattta tatctCCTACATCATCGTATTTCATACTTGCGAAGCAAGGTCATAGATCT ACAAAATGGAGATTAAGCAATCACCATGCACGGAGAAATTCACTCACTCT GCACACTGTAATAAGCTGTTACCTTAAAAGAAGAGATTTTGGCgcgaatt taatttggcggctagcggaaaaaataaattttggcggaaacttaatttgg cggatgtcgccaaattttttttccaccaaaatttcttcctttcagGTAGT TATTTGTTATgattaaaaatttgatttaaaagggAAATCACCAATTTAAG CCTGCTGTATTCATAAGTATTCTttatgtttcgaaaaaaaaaacacaggt AAAATTGGCCACGGTGAGCGCAATTGTCCTAGAGAGGAAATACTGTCATC CCTATTAGTAAGTTAGATGGGGATAAACTATGTCACATCTCTTCTTACAG ATCGAACCTGTGACAAACCCAGCCGTATCGCCACCCAAGTTGAGACGCAC CGTCAATACCGATGTACCCATCGAGGGACTGCCAACGAAAAACAAGGCGA AGAAGAGGAAAGCTGTCAATACGAAAGACGTTGTTGGTAACCATTGTCAC GTATGTCATGTAACTTTCTATTCGAAAGAGGACAAGCAATCTGGCATCAA AGGCAAAGGGTCTAGGGTACAGAACTCCAGCATAGGGTGTATTGTGGACG GGTGTGATCACTGGGTTCACGTACGTTGTTCTTCACTTAAGGATGTCATT GTAACAAAAGAAGACGCAAGAGTTGCAGATTTCTTGTGCCCAAAACACAA GAAAGACCGTGAGCTAGCTGCCTCGAAACTAAGAGTCCACAGCCAAGTGG ATCAAAAACATAGATTGTGGCTACCTTAAAGAGAGAAATTTAGGCAGGAA CTTAATTCGACGTGTGGCCGAAAACTATTTTAATTAGCTGTTCAGTGATT TTTTTGGCGGGAATCGTTGTCGAGTAGCAAATTACCTGTTTGAAATGAAT GACTTGGGGGAAAATTTATGATAAGATTAGATTTTGCTAATTCCTCTGAA ATCATTTCACTAAAGTTTCTTTCCTTAGGGCAGCTCAGCGCTGTTGATCG ATATAGACATAGGCAAATAATGGTTCCAAAATGTTGCCCATTACATTTTT ATCCTATACTCGGTGTTTTGTATGTAAGAGCTGTAAAATCTTAGCCGTCG GTCACCATTTTATACTTCCACTCGCTCTTCGTGTTTTTAAGTTAAACCCT ATCCATCTTAAACAACTAGGCCGTGAGTTTTCTTATGTAGCTTTGCTGGT TTTGGGAATAGTGAATACCTTTTCGATATTATGGAAAAGTCTTATCGTCT TTTGCCAGCTTTCATTAGTTGGAACTCCAAGTTTCGGAATCCAAAATTTG ATCTTCTTGTTCATCTCTTCCATGATAGCG

Coding sequence (CDS) from alignment at scaffold_285:423530..433109+

>TCONS_00057073 ID=TCONS_00057073|Name=TCONS_00057073|organism=Clytia hemisphaerica|type=CDS|length=4035bp|location=Sequence derived from alignment at scaffold_285:423530..433109+ (Clytia hemisphaerica)
atgtgtgtgagagccacagggttggatagtggcgATCCAATCCGAGTTCC
TTCCCATCTAGTATGCTTTCTAcaacgttgtggcagaaacgtgtcaaagg
aatggcaactttgtctagtagaaaGAAAAAGACGTTTGGTGCAAAAGAGG
TGGCGATCAAAGAAAGAACCAGACTCCAAACTGTTTGAGCAGCGTCTCAA
GGTTGCTGTCGGAAAGACCACTGGCTTGCATAGAGGTTTCAACATTTTCT
ACCGGTACCAAGTGTGGAGCAAAAATGGAAACACACGAACAGATCTGAAA
AAACTGCCGGGAAACGACAAAGGTACTCAAACCAACAGCATCGAGGACGA
AATAAGGGAAAGGCGTGGTACTATACGgATCGAACCTGTGACAAACCCAG
CCGTATCGCCACCCAAGTTGAGACGCACCGTCAATACCGATGTACCCATC
GAGGGACTGCCAACGAAAAACAAGGCGAAGAAGAGGAAAGCTGTCAATAC
GAAAGACGTTGTTGGTAACCATTGTCACGTATGTCATGTAACTTTCTATT
CGAAAGAGGACAAGCAATCTGGCATCAAAGGCAAAGGGTCTAGGGTACAG
AACTCCAGCATAGGGTGTATTGTGGACGGGTGTGATCACTGGGTTCACGT
ACGTTGTTCTTCACTTAAGGATGTCATTGTAACAAAAGAAGACGCAAGAG
TTGCAGATTTCTTGTGCCCAAAACACAAGAAAGACCGTGAGCTAGCTGCC
TCGAAACTAAGAGTCCACAGCCAAGTGGATCAAAAACATAGATTGTGGCT
ACCTTAAatgtgtgtgagagccacagggttggatagtggcgATCCAATCC
GAGTTCCTTCCCATCTAGTATGCTTTCTAcaacgttgtggcagaaacgtg
tcaaaggaatggcaactttgtctagtagaaaGAAAAAGACGTTTGGTGCA
AAAGAGGTGGCGATCAAAGAAAGAACCAGACTCCAAACTGTTTGAGCAGC
GTCTCAAGGTTGCTGTCGGAAAGACCACTGGCTTGCATAGAGGTTTCAAC
ATTTTCTACCGGTACCAAGTGTGGAGCAAAAATGGAAACACACGAACAGA
TCTGAAAAAACTGCCGGGAAACGACAAAGGTACTCAAACCAACAGCATCG
AGGACGAAATAAGGGAAAGGCGTGGTACTATACGgATCGAACCTGTGACA
AACCCAGCCGTATCGCCACCCAAGTTGAGACGCACCGTCAATACCGATGT
ACCCATCGAGGGACTGCCAACGAAAAACAAGGCGAAGAAGAGGAAAGCTG
TCAATACGAAAGACGTTGTTGGTAACCATTGTCACGTATGTCATGTAACT
TTCTATTCGAAAGAGGACAAGCAATCTGGCATCAAAGGCAAAGGGTCTAG
GGTACAGAACTCCAGCATAGGGTGTATTGTGGACGGGTGTGATCACTGGG
TTCACGTACGTTGTTCTTCACTTAAGGATGTCATTGTAACAAAAGAAGAC
GCAAGAGTTGCAGATTTCTTGTGCCCAAAACACAAGAAAGACCGTGAGCT
AGCTGCCTCGAAACTAAGAGTCCACAGCCAAGTGGATCAAAAACATAGAT
TGTGGCTACCTTAAatgtgtgtgagagccacagggttggatagtggcgAT
CCAATCCGAGTTCCTTCCCATCTAGTATGCTTTCTAcaacgttgtggcag
aaacgtgtcaaaggaatggcaactttgtctagtagaaaGAAAAAGACGTT
TGGTGCAAAAGAGGTGGCGATCAAAGAAAGAACCAGACTCCAAACTGTTT
GAGCAGCGTCTCAAGGTTGCTGTCGGAAAGACCACTGGCTTGCATAGAGG
TTTCAACATTTTCTACCGGTACCAAGTGTGGAGCAAAAATGGAAACACAC
GAACAGATCTGAAAAAACTGCCGGGAAACGACAAAGGTACTCAAACCAAC
AGCATCGAGGACGAAATAAGGGAAAGGCGTGGTACTATACGgATCGAACC
TGTGACAAACCCAGCCGTATCGCCACCCAAGTTGAGACGCACCGTCAATA
CCGATGTACCCATCGAGGGACTGCCAACGAAAAACAAGGCGAAGAAGAGG
AAAGCTGTCAATACGAAAGACGTTGTTGGTAACCATTGTCACGTATGTCA
TGTAACTTTCTATTCGAAAGAGGACAAGCAATCTGGCATCAAAGGCAAAG
GGTCTAGGGTACAGAACTCCAGCATAGGGTGTATTGTGGACGGGTGTGAT
CACTGGGTTCACGTACGTTGTTCTTCACTTAAGGATGTCATTGTAACAAA
AGAAGACGCAAGAGTTGCAGATTTCTTGTGCCCAAAACACAAGAAAGACC
GTGAGCTAGCTGCCTCGAAACTAAGAGTCCACAGCCAAGTGGATCAAAAA
CATAGATTGTGGCTACCTTAAatgtgtgtgagagccacagggttggatag
tggcgATCCAATCCGAGTTCCTTCCCATCTAGTATGCTTTCTAcaacgtt
gtggcagaaacgtgtcaaaggaatggcaactttgtctagtagaaaGAAAA
AGACGTTTGGTGCAAAAGAGGTGGCGATCAAAGAAAGAACCAGACTCCAA
ACTGTTTGAGCAGCGTCTCAAGGTTGCTGTCGGAAAGACCACTGGCTTGC
ATAGAGGTTTCAACATTTTCTACCGGTACCAAGTGTGGAGCAAAAATGGA
AACACACGAACAGATCTGAAAAAACTGCCGGGAAACGACAAAGGTACTCA
AACCAACAGCATCGAGGACGAAATAAGGGAAAGGCGTGGTACTATACGgA
TCGAACCTGTGACAAACCCAGCCGTATCGCCACCCAAGTTGAGACGCACC
GTCAATACCGATGTACCCATCGAGGGACTGCCAACGAAAAACAAGGCGAA
GAAGAGGAAAGCTGTCAATACGAAAGACGTTGTTGGTAACCATTGTCACG
TATGTCATGTAACTTTCTATTCGAAAGAGGACAAGCAATCTGGCATCAAA
GGCAAAGGGTCTAGGGTACAGAACTCCAGCATAGGGTGTATTGTGGACGG
GTGTGATCACTGGGTTCACGTACGTTGTTCTTCACTTAAGGATGTCATTG
TAACAAAAGAAGACGCAAGAGTTGCAGATTTCTTGTGCCCAAAACACAAG
AAAGACCGTGAGCTAGCTGCCTCGAAACTAAGAGTCCACAGCCAAGTGGA
TCAAAAACATAGATTGTGGCTACCTTAAatgtgtgtgagagccacagggt
tggatagtggcgATCCAATCCGAGTTCCTTCCCATCTAGTATGCTTTCTA
caacgttgtggcagaaacgtgtcaaaggaatggcaactttgtctagtaga
aaGAAAAAGACGTTTGGTGCAAAAGAGGTGGCGATCAAAGAAAGAACCAG
ACTCCAAACTGTTTGAGCAGCGTCTCAAGGTTGCTGTCGGAAAGACCACT
GGCTTGCATAGAGGTTTCAACATTTTCTACCGGTACCAAGTGTGGAGCAA
AAATGGAAACACACGAACAGATCTGAAAAAACTGCCGGGAAACGACAAAG
GTACTCAAACCAACAGCATCGAGGACGAAATAAGGGAAAGGCGTGGTACT
ATACGgATCGAACCTGTGACAAACCCAGCCGTATCGCCACCCAAGTTGAG
ACGCACCGTCAATACCGATGTACCCATCGAGGGACTGCCAACGAAAAACA
AGGCGAAGAAGAGGAAAGCTGTCAATACGAAAGACGTTGTTGGTAACCAT
TGTCACGTATGTCATGTAACTTTCTATTCGAAAGAGGACAAGCAATCTGG
CATCAAAGGCAAAGGGTCTAGGGTACAGAACTCCAGCATAGGGTGTATTG
TGGACGGGTGTGATCACTGGGTTCACGTACGTTGTTCTTCACTTAAGGAT
GTCATTGTAACAAAAGAAGACGCAAGAGTTGCAGATTTCTTGTGCCCAAA
ACACAAGAAAGACCGTGAGCTAGCTGCCTCGAAACTAAGAGTCCACAGCC
AAGTGGATCAAAAACATAGATTGTGGCTACCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035955XLOC_035955Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057073-exon-scaffold_285-1491911889:423530..423709TCONS_00057073-exon-scaffold_285-1491911889:423530..423709Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1510915933:423530..423709TCONS_00057073-exon-scaffold_285-1510915933:423530..423709Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1575043694:423530..423709TCONS_00057073-exon-scaffold_285-1575043694:423530..423709Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1491911889:425418..425509TCONS_00057073-exon-scaffold_285-1491911889:425418..425509Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1510915933:425418..425509TCONS_00057073-exon-scaffold_285-1510915933:425418..425509Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1575043694:425418..425509TCONS_00057073-exon-scaffold_285-1575043694:425418..425509Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1491911889:431133..431225TCONS_00057073-exon-scaffold_285-1491911889:431133..431225Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1510915933:431133..431225TCONS_00057073-exon-scaffold_285-1510915933:431133..431225Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1575043694:431133..431225TCONS_00057073-exon-scaffold_285-1575043694:431133..431225Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1491911889:431596..431664TCONS_00057073-exon-scaffold_285-1491911889:431596..431664Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1510915933:431596..431664TCONS_00057073-exon-scaffold_285-1510915933:431596..431664Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1575043694:431596..431664TCONS_00057073-exon-scaffold_285-1575043694:431596..431664Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1491911889:432130..433109TCONS_00057073-exon-scaffold_285-1491911889:432130..433109Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1510915933:432130..433109TCONS_00057073-exon-scaffold_285-1510915933:432130..433109Clytia hemisphaericaexon
TCONS_00057073-exon-scaffold_285-1575043694:432130..433109TCONS_00057073-exon-scaffold_285-1575043694:432130..433109Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057073-proteinTCONS_00057073-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_285supercontigscaffold_285:423530..433109 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.873483 1.12936 0.604964 0.261915 1.98088 1.76794 3.30175 3.41807 3.76838 4.88222 6.34011 6.54813 7.53108 7.47929 5.69638 6.10345 8.57789 7.95996 5.68996 5.13487 7.79997 6.4336 3.04213 3.76448 5.81834 5.72619 5.38754 4.66948 2.17894 2.01194
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057073 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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