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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057122 ID=TCONS_00057122|Name=TCONS_00057122|organism=Clytia hemisphaerica|type=transcript|length=598bp
CTAGTAATCGTAATGAGACAAGGCTACTGTCAACttagttttattttatt
ggattttttcttGGTAGATCCATAGATTTTTTCTACATTTTAGTGGCTGA
AAGATATATTCCTTGCGTACTTCAATGACTGGGAGAAGGCTACCAAAAAG
CTCAAGCTACCTGCAAAAGAGCAAGCAAAACATTGCATCAGTCAGGCTAC
GCTGAATGGTCTCAGAATCACGGTGCATTCTTTCTGCGAGATGGTCCCAG
AATTACTCAGAATGgaaggtgtcaaatttttcttaTCCGAAAAGCTGAAT
CAATACCCTGTCGAGGAGCATTTTTCGAAACACAGGGCTAAAAGGTGGTG
TCGAAAACATCAATTAGAGCAATACATGATGACTGAGCTAAAAATGATTG
TTGCAAAGTCGAAAGTGATCGTCGCAATAAATGGTAACTTCCGTGGTAGA
ACCAAATGAAAAATTGTTATTGACATTGACGACAAAACTTTACTACCGAA
ACGTCCAAAAGTACCAAAGAAATCAAATGAACAAAAACATTCATGAATAC
TTTTCATACTATGGAATTATCGTATATATTTTGTCCGATGGTTTATAA Run BLAST on NCBI transcript from alignment at scaffold_285:517104..518412- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057122 ID=TCONS_00057122|Name=TCONS_00057122|organism=Clytia hemisphaerica|type=transcript|length=1309bp|location=Sequence derived from alignment at scaffold_285:517104..518412- (Clytia hemisphaerica)
CTAGTAATCGTAATGAGACAAGGCTACTGTCAACTTAGTTTTATTTTATT
GGATTTTTTCTTGGTAGATCCATAGATTTTTTCTACATTTTAGTGGCTGA
AAGATATATTCCTTGCGTACTTCAATGACTGGGAGAAGGCTACCAAAAAG
CTCAAGCTACCTGCAAAAGAGCAAGCAAAACATTGCATCAGTCAGGCTAC
GCTGAATGGTCTCAGAATCACGGGTAAAAATAAACACGAGTTTTAACTTG
TCCTTTTCACGAGGCCCCCCCCCAGCAGTTTGCGTGATGGCATGATTGGG
ACTTTTTTCTTGCGTGATGGCGTGATCAAGGTTTTGGCGTGATGCATGAA
AGGGCAAAAATTTGAGGTGGTTTGGGCTATTTTTGCGTGATGACAAATTT
TAGCGATTTTCGTGATGCGTGATGGAGAAACTTCTTTTGCGTGATGGCGT
GATTAGGGGTGTCGCTGGGGGGGGGGCTCTTTAATTGCAAGTAGTCTTAA
GTGCGTTAGTATATGATACTTCTCCAATTCTAGCTTTGCTTAGGCGAGAT
TCTAGTTGTTTTTGGATATACGAATGGTATATACGAATGAAACAATGTTT
TTGTTTAAAAATAAGTGACCACAACTCTGCTATTCATGTTGATTGCCCAT
TCTCAATTATATTCCTAGTCTACTTCACTTGAGTCAGCGTCATCAAAAAG
TTCGGCCAAATTAGTCTCTGTTCTAGGGTATCCATACATACAAAAATGAA
AACTACCCAAGTCTACATAATTCTCAATATCAAGATGACAAAATTTAGCT
TTATCAATGATTGGTTTAATACCTGGATCAAGTACAGTCATTGAACCGTG
TAGAGAACTGTGAAATATTCCCTAAATTAAACCCCAAAATGTCAAACTAC
ATATATGTTACTGTACAATAGTTATTTTATTCAGTGCATTCTTTCTGCGA
GATGGTCCCAGAATTACTCAGAATGGAAGGTGTCAAATTTTTCTTATCCG
AAAAGCTGAATCAATACCCTGTCGAGGAGCATTTTTCGAAACACAGGGCT
AAAAGGTGGTGTCGAAAACATCAATTAGAGCAATACATGATGACTGAGCT
AAAAATGATTGTTGCAAAGTCGAAAGTGATCGTCGCAATAAATGGTAACT
TCCGTGGTAGAACCAAATGAAAAATTGTTATTGACATTGACGACAAAACT
TTACTACCGAAACGTCCAAAAGTACCAAAGAAATCAAATGAACAAAAACA
TTCATGAATACTTTTCATACTATGGAATTATCGTATATATTTTGTCCGAT
GGTTTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057122-exon-scaffold_285-1575043694:518190..518412 | TCONS_00057122-exon-scaffold_285-1575043694:518190..518412 | Clytia hemisphaerica | exon |
| TCONS_00057122-exon-scaffold_285-1575043694:517104..517478 | TCONS_00057122-exon-scaffold_285-1575043694:517104..517478 | Clytia hemisphaerica | exon |
| TCONS_00057122-exon-scaffold_285-1510915933:518190..518412 | TCONS_00057122-exon-scaffold_285-1510915933:518190..518412 | Clytia hemisphaerica | exon |
| TCONS_00057122-exon-scaffold_285-1510915933:517104..517478 | TCONS_00057122-exon-scaffold_285-1510915933:517104..517478 | Clytia hemisphaerica | exon |
| TCONS_00057122-exon-scaffold_285-1491911889:518190..518412 | TCONS_00057122-exon-scaffold_285-1491911889:518190..518412 | Clytia hemisphaerica | exon |
| TCONS_00057122-exon-scaffold_285-1491911889:517104..517478 | TCONS_00057122-exon-scaffold_285-1491911889:517104..517478 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_285 | supercontig | scaffold_285:517104..518412 - |
Blast
The following BLAST results are available for this feature:
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