Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057712 ID=TCONS_00057712|Name=TCONS_00057712|organism=Clytia hemisphaerica|type=transcript|length=1138bp CTCTTAACATTTTTCCATCGCAAGTTTGGGGGGGGGAAACaaaagtactc tatattttacgtatggggaagtgTAACAAAGATTTACAAgatagaaaagt ttcgttttagggtaaagaatcagtattgtgaatttaatcgagtttctatt ttgcaatttttctacatAGCCAAATAAaggtttttctattgttcttgctc gattgcctctaagGATAAGTTCCAAAAGAATGAGGGTATTGAGACATAAT ATGAGGAATTTGCGGGAAAACGAATTTTAACATTTCTCTAGGCTGCATGT TGAATATATAGCTAGTCGTTTGGGAGAACGTGACGACCTATTGTCTATCT GTCTATCTATCTAAATATTTAAATAACATCAGGCCGGAAGGCCCATTCTT GCTACATATAAAAATACAATGATAGTCCTGTAAAAACCTTTATTACACGT TGAactataaaaacaaataaaagaaagccTGAGAGGGAGTTGAGAATTTA AGGTATATGTAAAAGTTTGGAATTCTGACAAAAATTGTGGTTTTCAGACT GACAATCTTAGATTGAGATTAGTGCCAAAATCGAGATTGAACTTATGATA ATAACgaatgaaattttaaatatcTTGAATACAATAAAATGTTAAATTAT GATTataaatagtaaataaatataGTGAAAACTTTTTACTAGAAGTATTA CTAGAAAATAgttaatttttcttaaaatgttcaatAAGTTTAGTTCTGAA GAGATCCTCTTTTGTGATCTTTCTCAAATCAGTTGATAAATTGCTATTGA CTCAGGTCTGCATATTAAATTACTCCAGCCAATTTCTGTGTTTGTGCCAG ATGGAGAATGAGATGACAGCTGCTCGCGGTTTGCTTTTGACCACTGGATT CCACTAGTTTTCTACAAGTTTCTACCCGTTTCTACTAGTTTTTCATTGGT TTCCACTGGTTTGCACAAGCTTCAGGTTTTAGATTTAACAGAATTTAAAG CTCAGGAAAGAGTGATATTTTCAGGCTTTCTACTTTATTTAATCATATAT TTTGATTTGGGAGGGGTGTGATGGCTTCCAGGTTATATTTTCAACCTAGT TAGAccattcacaagctttttggaTCCTCAAGTCTTAA Run BLAST on NCBI transcript from alignment at scaffold_297:176182..177319 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057712 ID=TCONS_00057712|Name=TCONS_00057712|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_297:176182..177319 (Clytia hemisphaerica) TTAAGACTTGAGGAtccaaaaagcttgtgaatggTCTAACTAGGTTGAAA
ATATAACCTGGAAGCCATCACACCCCTCCCAAATCAAAATATATGATTAA
ATAAAGTAGAAAGCCTGAAAATATCACTCTTTCCTGAGCTTTAAATTCTG
TTAAATCTAAAACCTGAAGCTTGTGCAAACCAGTGGAAACCAATGAAAAA
CTAGTAGAAACGGGTAGAAACTTGTAGAAAACTAGTGGAATCCAGTGGTC
AAAAGCAAACCGCGAGCAGCTGTCATCTCATTCTCCATCTGGCACAAACA
CAGAAATTGGCTGGAGTAATTTAATATGCAGACCTGAGTCAATAGCAATT
TATCAACTGATTTGAGAAAGATCACAAAAGAGGATCTCTTCAGAACTAAA
CTTattgaacattttaagaaaaattaacTATTTTCTAGTAATACTTCTAG
TAAAAAGTTTTCACtatatttatttactatttatAATCATAATTTAACAT
TTTATTGTATTCAAgatatttaaaatttcattcGTTATTATCATAAGTTC
AATCTCGATTTTGGCACTAATCTCAATCTAAGATTGTCAGTCTGAAAACC
ACAATTTTTGTCAGAATTCCAAACTTTTACATATACCTTAAATTCTCAAC
TCCCTCTCAggctttcttttatttgtttttatagtTCAACGTGTAATAAA
GGTTTTTACAGGACTATCATTGTATTTTTATATGTAGCAAGAATGGGCCT
TCCGGCCTGATGTTATTTAAATATTTAGATAGATAGACAGATAGACAATA
GGTCGTCACGTTCTCCCAAACGACTAGCTATATATTCAACATGCAGCCTA
GAGAAATGTTAAAATTCGTTTTCCCGCAAATTCCTCATATTATGTCTCAA
TACCCTCATTCTTTTGGAACTTATCcttagaggcaatcgagcaagaacaa
tagaaaaacctTTATTTGGCTatgtagaaaaattgcaaaatagaaactcg
attaaattcacaatactgattctttaccctaaaacgaaacttttctatcT
TGTAAATCTTTGTTAcacttccccatacgtaaaatatagagtacttttGT
TTCCCCCCCCCAAACTTGCGATGGAAAAATGTTAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00057712-exon-scaffold_297-1491911889:176182..177319 | TCONS_00057712-exon-scaffold_297-1491911889:176182..177319 | Clytia hemisphaerica | exon |
TCONS_00057712-exon-scaffold_297-1510915933:176182..177319 | TCONS_00057712-exon-scaffold_297-1510915933:176182..177319 | Clytia hemisphaerica | exon |
TCONS_00057712-exon-scaffold_297-1575043694:176182..177319 | TCONS_00057712-exon-scaffold_297-1575043694:176182..177319 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_297 | supercontig | scaffold_297:176182..177319 . |
Blast
The following BLAST results are available for this feature:
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