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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057737 ID=TCONS_00057737|Name=TCONS_00057737|organism=Clytia hemisphaerica|type=transcript|length=2145bp
GAAAAGactaaaattgaaagttttggatTTGAGAAAGGTGATAAAAGAGA
ACATTTTTGAGTAAAGATCTTACATTGTTGAACTATTTCTTAACAACTGA
CACTTGCGGTACTACATGCATTTTACCAACGTACCGACTTCAAGATGAGA
ACTCTAGCTAATATTAAAATTCGAATTCCAGCaattattgtttcaaaaag
TCGCAAGTTATTAAAAATGATGACTACATACAACAACAGCTCAACCAGAC
AAAATGGTGGAATCTCTAATACCAATATCACGGCAACCGAAGCTCTAAAT
GGTTTGTCAGATGGATTGTCATTGGCAACCAAATTAAGCATCTTATGTAT
CATCTTAACGTTCGCGTTGCTTGGAAAcgtcattttgattgtttctaTAT
TAAAGACACCACGCATGCGTAAATCATTGACCAATCAACTGATTCTAAAT
CTAGCATTGTGTGACGTAGTAATCGTTATTACAGGTATTCCAGGCGAAAT
CATTAACCAGACATTAGGAACCTGGGTACTAGGAGAGATCGGATGCCGTT
TACTATATCCCGTATCAACCTACGCCGTAATTGCTGCCGTCACCACGTTA
CTTATGATCGGCGTAGACCGCTTCTTTGCGGCTTCCTATCCGTTCCGGTA
CCGTACCCTGAAATCGAAATCACATCTTACGCTTGTTATAGTGCACGTGT
ACGCTCTCGCTTGCGTCGTCCCGTATGCCTTTCATTTGACGTTAACGGAA
GATGACGGCGTCATTATATGCGACGAGACGTGGTCAGATTCTACAAGCAC
TATTTATACTATATTTTTATTCGTGATTCAATACGGCGCTCCTCTTCCCA
TTATCGTTGCGTTATACGCTAAAACGTGGATACGGATCAAACACCAAAAC
GATAGCGTCATCAAAAACGCGGAGAGTATGCATCGTGGGAGTATGAAACG
TCAAGACGATAGAAAACGGGAGAGTGGAGAATACGCCCGGCAAAGTCTTT
TATCCGTCGATGATAATTCGTTAGCCCCAAATCACAGCACCCGGCGTCGA
TCACGGTCACTTTTAGATGCAATACGTGAAAGTTTCATTTCCCTTACGGG
GGAAGACGGGGAACACTCGCATAAATACGTTTCACAGACGGCGATAGATC
GACATAAACAGACAACGAAACTGTTGAAGCTTTTCATCTGTGTTATTCTT
GTGTTTGCAATTTGTATGTTACCTTATCATATCATTTGGTTAAATATCGC
TATAACGGGtaaatcacttttatcaaatgaaaCTCATTATCTAATAGCGT
ATTTGTTAACATACGTTAATTCCGTAATTAATCCGATTATATACGGAATT
CACCCACGTTTCCGTATTCTTTATAAAAATTGTATAAAAGAGGTTTTAAA
TTGTTGTACTAATGTATGTTTCAAAAGACAATTTTATGAAACGGAGGAGA
TACGTGGCAGTACTGCAGACTCTGTCTATTCCGTTTGGACACCAGAAACA
TTTCGGAAACGGATTTCCCGGACGTTTTCCACCGGTTCAAAGTCTTCACT
GAAAAAGCGGAACAAAAGCCGATCAGACAGTTTACCTAAAAATGGAACGT
CTAGGCGACGGAGTAAGACTGTTCCACCGACAAATATTCCCGTCAAAAAA
CGAAGTTTAACGATACCACAAATCACGGTGACGGATATTGAACACGATAT
AGGCGACGTTTTTACCGACGAGAACCGATTAAAAGTGTCGGTGTCGTCGA
GTTGTAGTAGCGAGAACGATGACGTTTTCGTTACGAACAATCAAGCTTTA
ACAGAATATCGAGCATCTTTTTTTAACAGTAACGATGAAGGGAATTCGAA
ATTTGACCAACGTGGTTTATTATATATTGACAAAGATTTTGTCATGTCTA
GAGACGGTTTACTATTACTTGAGACAATGTCCGAAAGTGATTGCTAATTA
TCAGAGATTGATAAAGAATAGTACACGATTTTTTAtgagagcatccaaaa
tttttgaagccttcggatgctcttaactttttaagttttaagcctaaaaa
tgttcttaacatgttctcaccattttttgagaatttttgtccattttcct
aagaaattggatgttttagagtctgcaaagcctgaaaatgttgaa Run BLAST on NCBI protein sequence of TCONS_00057737-protein >TCONS_00057737-protein ID=TCONS_00057737-protein|Name=TCONS_00057737-protein|organism=Clytia hemisphaerica|type=polypeptide|length=600bp
MRTLANIKIRIPAIIVSKSRKLLKMMTTYNNSSTRQNGGISNTNITATEA
LNGLSDGLSLATKLSILCIILTFALLGNVILIVSILKTPRMRKSLTNQLI
LNLALCDVVIVITGIPGEIINQTLGTWVLGEIGCRLLYPVSTYAVIAAVT
TLLMIGVDRFFAASYPFRYRTLKSKSHLTLVIVHVYALACVVPYAFHLTL
TEDDGVIICDETWSDSTSTIYTIFLFVIQYGAPLPIIVALYAKTWIRIKH
QNDSVIKNAESMHRGSMKRQDDRKRESGEYARQSLLSVDDNSLAPNHSTR
RRSRSLLDAIRESFISLTGEDGEHSHKYVSQTAIDRHKQTTKLLKLFICV
ILVFAICMLPYHIIWLNIAITGKSLLSNETHYLIAYLLTYVNSVINPIIY
GIHPRFRILYKNCIKEVLNCCTNVCFKRQFYETEEIRGSTADSVYSVWTP
ETFRKRISRTFSTGSKSSLKKRNKSRSDSLPKNGTSRRRSKTVPPTNIPV
KKRSLTIPQITVTDIEHDIGDVFTDENRLKVSVSSSCSSENDDVFVTNNQ
ALTEYRASFFNSNDEGNSKFDQRGLLYIDKDFVMSRDGLLLLETMSESDC Run BLAST on NCBI transcript from alignment at scaffold_298:91409..98946+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057737 ID=TCONS_00057737|Name=TCONS_00057737|organism=Clytia hemisphaerica|type=transcript|length=7538bp|location=Sequence derived from alignment at scaffold_298:91409..98946+ (Clytia hemisphaerica)
GAAAAGactaaaattgaaagttttggatTTGAGAAAGGTGATAAAAGAGA
ACATTTTTGAGTAAAGATCTTACATTGTTGAACTATTTCTTAACAACTGA
CACTTGCGGTACTACATGCATTTTACCAACGTACCGACTTCAAGATGAGA
ACTCTAGCTAATATTAAAATTCGAATTCCAGCaattattgtttcaaaaag
GTAAGAATTTTGAATACTTTTTGTatttaaaacacccccttctcacagac
tcaccgggaccccttcccactctggaaaaattggttaaaatatcgtcccc
aatGGAAAATTATGCTCTGATTTTTGTCATCactaaaaataatcagataa
gaaaatcctcattgcaaaatatcgtcatattttttccatccccactgaat
tttctgggtcgaaaacaatggaattcaaaccCCAGCCATGGAAAACACGA
GAATagcaatccccatcgagttttggtccgttatttttatccccagcTGA
AAAgatcctactgggtctgtgagaagggggtgtttaaagaaaatctttat
CAAGGCGATAAACCCAGGGGTTACTGCCCTCGCCGATTGACATAGATTTT
AATTAGGAGACAAGTGGAGTTAAGTATTATTACGACTCAAAAAATATCCC
TGTaaacttagactacacaatagacagctccgggcttttaggccttactt
tgtaggagttttacgcttgAATTGAAgggagatatgacgtagcctacctA
AACTAAGACCAGAGGAAGCTGGTTTTGTTTATTCAATACACTAATGGAAG
TTTAAtgaccaaattttaagtgtTGAAAATGATAACTAAAGGGGTGGTAA
AGATATCGCGtttgttgaaaaagatttaatttAGATTATGGAAATTTTCG
GGGGATTAGAACGTGACAGAGAAAACGGTAGTATAGTAGGGGATTCATGC
CAGTGTTTGTATGTAACATAGGATTcacttttttcgatttttatcaacat
ttttgaagccttcagattgttcttaactttttaagttttgagcCTAGAGt
agatgttcttaaattttcaccactttttgagtatttttgtccattttcct
aagaaattgggtattttaaagcccataaagccttaaatttTTGACTTGTT
ATATTTAGTTTTGACCATCAAAGTCTAATGCTCTTATAAAGTTTGCTCTA
atcaaataatgtgtattttaagagaaattttttaaatcttaagaaattta
acatttttatcTCCGAAGGATCTTGACAcgatcttttttcaatttttgtt
tccaaactttttcgattatattttttgtttgaacTATTATTTCTAGcgtc
tgaattttttttcaatgactTTGACTTTCAGGGTTTTTTTGGTTTCCTTG
TATTACCGtcaagtttttataagaacattcaaaatttttgaagcctcggg
attttcttaacttctttagttttaagcctaaaaatgttcttaaaatgttc
tttgttcttaacattttggcaatcgaagccttttgttcttatatagtttg
ttcttataaaaaaaacgttactgtcaactttttatttgaagtttgaagca
acgatgtaaaaataagagataaccaacttgccttgattctcaaaaaacat
ccgtgttacggttgtaaaaatattaatgacattttgcatcgtgaaaagtg
caattaaataaaaacttgcttcatttgcaaccttctattggacagaatcg
atcacgtgatgtatatttttccaaaatttgggttagaaaaagtgtatttt
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatctag
ctaaaagcataacacgcactgcacacagagctttttaaaggagtgctcat
ttcaataggaaaacaatggttgttctcttgggagaagtgccttctagaac
tagttggttatctattatttttacatcgttgttTGAAGTTTGTTTCGGTG
TATGTCTACCATCTTTCTTTATCAAGTCAAATTTATCTTTctaaaccttt
ttttataagaacaaaatatatatgACCATAAAGCTTCGAAGGCCAAacta
ttaagaacaatttaagaatattttaaggctttgcggattctaaaacacct
gatttctcagaaaatggacaaaaatactcacaaaatggtgaaaataagaa
catataagaacatttttaggctaaaaaatcaaaaacattcgaagaaaaaa
tttagatgttcttataaaaacgtgtacatcACTCTTTGCAAAAGGCTTTT
GCGTTTTCTTTGACTTTACGAGAGACAAACTATGGGTCGATTCTTTTTGG
TATTATTACTGTGAACAAAAAAACCAATAGGGTTTATAATTTctcgattt
ttctttttcaaaaaaaaataatttaattagTTATCTTTTGTTATTGACAA
ATAAGAAATAacaaaattcaggatttttctAAATTCCGTTCTGTTGCTTT
TTGAAAGTTAAGCAATACCAATtttatttgttgttctacgggcaaatcgt
tagcaaaatatgagtcggtcggtcggtaaaataaaggtaagattttcatt
aatcaTGGAAGGTAATAAGGCTTTAagtaacattttcaaataaacttggt
ggaaaattcatcattcatctttgatggagtttgtaataaaatctttcgtG
TATAGAAGTGTAAATGTTTTAAATGTACTAATATTAGAAATTTGTGGCAT
AGGAAATCCAATATTATTACTTTTACGTTTGCAGCAAATGCTGGGTCGGT
CAAGCCCGTAGAACAACacattaaattggtctcgccttagagGTATGCTG
GTTTTTATCCCTCGGTGCAGAGGGTCCGAGCTTATCGAGAAAGACAATGT
TTTTCTGCTAAGGTTATCCACCCATTTAAAAGAATGGAGGTTAATGACAT
TTGAGTTTCAAGACAAGGCTAAAGCTGAATCTTAAACCTTTCTCAAGTAA
GAAAAtctgaagccttaaaatttgcGCGGTATTTTGGATGTcgatttaat
cttttttttttgtgttttaaattttttaaattgtggCGATGAAATCAAGC
TAAGCATTTAtattatctggtaccagatgttgAAATTTACTATGACGCTT
TCTTCTGAACTGAAGGTCGGGCAAATTTTAGGAATATCAGATAATCATTT
GTATACAAACAACGTGGGCCGTGCCACCTATGTAACTAATTCATCAAGAT
TTAAAAGCACCTACTTATAGCCAACACCTATATAATAGGGTTACGACTTA
TTCCCAAATCGTGATCATGCATATAATCGTTTTGTACAGCCTATTGgcgt
taaatgaacgttaaaTGAATGTGTTGGACGTTAGATAGATGTTAAAATAA
CGTTGTAGACGTGAGATGGATGTTGAAATAGCGTTGTGGACGTTTGATGg
atgttgaaataacgttgtggaCGTTAGATGGATGTTAAATTAATGTGTTG
GACGTTGGATGGATGTTAAATTAACGTTGTGGACGTTAGATGGATGTTAA
ATGGATGTGTTGGACGTTAGTTGGATGTTAAATGGATATGTTGGACGTTA
GATGGATGTTTAAATGACGTTGTGGAAGTTAGATGAATGTTAAAATAACG
CTGTGTGTCAGCTTAGTATCAAAATTATCTTACTCAACATTAGAGAAAGA
AAAACAGCATCTGTGGCCGGCAGTAGATTTTCTGCTGATATTTTTCTTGC
ATACGTTTCTTGCAATTTCTcatcaagttttcaaaaaaaaaggatAATTA
ATTTCTCTATAATGCTTCTTAGATTTTTTTACAAGCACAACACTCTCTAA
GATACCAACGTTCCGTGAATCAGTgccttttcaactttttgaattCTGAA
AAAGCATCGCTCTCACATTAAGAATATCgcatttaaaatcttaaaatttc
tcaAAGAGCGCTGTGGTGATCATATGAGGAAATACTGCATATATTGGGGG
CTCAAAAACAGTAGATATTCATATCTATTGAGTATCTAACATGGAAAGAT
GGTTTTATCTACATAATGTAATGTCCAAAATTGATAAAGttgcttattta
aaaaaaacactttatGGTTTGCAATATTGCGAGAATACGAAAAAAGACTC
AAGATTTTCCGCGTCAAAAATAAACGTAAAAGAAACAGATTATTACACAC
TCTTTCTTCagaagaacatttttataagaacaatgagtcTTAAAAATGCT
ATTAAATAAggacaatttaagaacaaagcTTAGCTAGGAAATTTTATTCT
ACCTACAGTACCTCAGTTTTGCCATAGGaataagaacaagataagaacaa
ttaTAGTCTCAAAGTGTcgaaaaactaagaacatccgagaCTGATAAAAG
CTTTACTAGTTCTTATTAGAAAGCTTGCAACTATTGTCTGATTTTATAGG
TAAGTTTAGAGGAGAGATTTAAGGAGAGAATTGTTGGATCTTTGCGGTAA
AGTCTAGTAGGCAACGAGCGAGGGAATAGATTGGAATCTGGATAGAATGA
TAACAAATTGTGAAAGAAAATCTGGTTAAGCGGTTATCGAATGTATTGAA
AAGGACTGAGCTACGCGCGTCacctttttctttgattttctcacgAAAAG
GAAAATCATTTTAGTGTTGGGGGTATATTTACCTGGTATTTGGGTTTTCC
TGACATACTTTTTGCTCAACAAGAATATCAAGAACCTGGAATTCTAAAAT
ATTCAGATTCGTGGTATTTATGATGTAATGCTttatgctctaccttcatg
ctactgCCACTCTAAATTAAAGATTAGCGGTAAACACCCCGTCTTTTCTG
TCATGGATATcacaaatttcgatttttacaaTGTGAAAGTAGTGACTGTG
TAAAAGATAAAACAATTGAACGAGGTTTACATAATTTAAAACAATGGTAG
CAAGCCAAAGTTCATAATTTTTATGCctgttgaaaaatcatttttccaag
tgttttagattttatttaattGTTCTCCTTGAAATTATATTACCAACGGT
GTATAGTGATGTAATAGCTGCCTTTTATTTTACGGAGGACGCCCGGCTCT
GTATTGAATGGTCTAGGAGTCGTCTCGTTAGAACCGTCTTACGCTGTAGT
TTATACTGCCTGCAATCTTGCGAAACACTGTCACACAGTTTTTTGGATCG
AGTGCGTTAATCTGGTGTGAACCACCAGGGAATAAGGCCAGCGTACTCGA
CCCTCATCCAATTGATACTTAACACAGTCACATAAAGTCttcttgagttt
ctgtctacctaattcccctcacatggcatgggttggccCGGGCAAAAGTA
AACTCACTTGCCAACTGATTCACAGTCCCTTGTGGGAGTCGAGCACCAAC
GATGCGAATCGATACCAACTACACTATTGCGCCTTTTAGTGTTTTGTAAA
ACTTACATAAGTCAATGAATACTTTATCCTTTTTTTTCTCTAGTCGCAAG
TTATTAAAAATGATGACTACATACAACAACAGCTCAACCAGACAAAATGG
TGGAATCTCTAATACCAATATCACGGCAACCGAAGCTCTAAATGGTTTGT
CAGATGGATTGTCATTGGCAACCAAATTAAGCATCTTATGTATCATCTTA
ACGTTCGCGTTGCTTGGAAAcgtcattttgattgtttctaTATTAAAGAC
ACCACGCATGCGTAAATCATTGACCAATCAACTGATTCTAAATCTAGCAT
TGTGTGACGTAGTAATCGTTATTACAGGTATTCCAGGCGAAATCATTAAC
CAGACATTAGGAACCTGGGTACTAGGAGAGATCGGATGCCGTTTACTATA
TCCCGTATCAACCTACGCCGTAATTGCTGCCGTCACCACGTTACTTATGA
TCGGCGTAGACCGCTTCTTTGCGGCTTCCTATCCGTTCCGGTACCGTACC
CTGAAATCGAAATCACATCTTACGCTTGTTATAGTGCACGTGTACGCTCT
CGCTTGCGTCGTCCCGTATGCCTTTCATTTGACGTTAACGGAAGATGACG
GCGTCATTATATGCGACGAGACGTGGTCAGATTCTACAAGCACTATTTAT
ACTATATTTTTATTCGTGATTCAATACGGCGCTCCTCTTCCCATTATCGT
TGCGTTATACGCTAAAACGTGGATACGGATCAAACACCAAAACGATAGCG
TCATCAAAAACGCGGAGAGTATGCATCGTGGGAGTATGAAACGTCAAGAC
GATAGAAAACGGGAGAGTGGAGAATACGCCCGGCAAAGTCTTTTATCCGT
CGATGATAATTCGTTAGCCCCAAATCACAGCACCCGGCGTCGATCACGGT
CACTTTTAGATGCAATACGTGAAAGTTTCATTTCCCTTACGGGGGAAGAC
GGGGAACACTCGCATAAATACGTTTCACAGACGGCGATAGATCGACATAA
ACAGACAACGAAACTGTTGAAGCTTTTCATCTGTGTTATTCTTGTGTTTG
CAATTTGTATGTTACCTTATCATATCATTTGGTTAAATATCGCTATAACG
GGtaaatcacttttatcaaatgaaaCTCATTATCTAATAGCGTATTTGTT
AACATACGTTAATTCCGTAATTAATCCGATTATATACGGAATTCACCCAC
GTTTCCGTATTCTTTATAAAAATTGTATAAAAGAGGTTTTAAATTGTTGT
ACTAATGTATGTTTCAAAAGACAATTTTATGAAACGGAGGAGATACGTGG
CAGTACTGCAGACTCTGTCTATTCCGTTTGGACACCAGAAACATTTCGGA
AACGGATTTCCCGGACGTTTTCCACCGGTTCAAAGTCTTCACTGAAAAAG
CGGAACAAAAGCCGATCAGACAGTTTACCTAAAAATGGAACGTCTAGGCG
ACGGAGTAAGACTGTTCCACCGACAAATATTCCCGTCAAAAAACGAAGTT
TAACGATACCACAAATCACGGTGACGGATATTGAACACGATATAGGCGAC
GTTTTTACCGACGAGAACCGATTAAAAGTGTCGGTGTCGTCGAGTTGTAG
TAGCGAGAACGATGACGTTTTCGTTACGAACAATCAAGCTTTAACAGAAT
ATCGAGCATCTTTTTTTAACAGTAACGATGAAGGGAATTCGAAATTTGAC
CAACGTGGTTTATTATATATTGACAAAGATTTTGTCATGTCTAGAGACGG
TTTACTATTACTTGAGACAATGTCCGAAAGTGATTGCTAATTATCAGAGA
TTGATAAAGAATAGTACACGATTTTTTAtgagagcatccaaaatttttga
agccttcggatgctcttaactttttaagttttaagcctaaaaatgttctt
aacatgttctcaccattttttgagaatttttgtccattttcctaagaaat
tggatgttttagagtctgcaaagcctgaaaatgttgaa Coding sequence (CDS) from alignment at scaffold_298:91409..98946+ >TCONS_00057737 ID=TCONS_00057737|Name=TCONS_00057737|organism=Clytia hemisphaerica|type=CDS|length=3606bp|location=Sequence derived from alignment at scaffold_298:91409..98946+ (Clytia hemisphaerica)
ATGAGAACTCTAGCTAATATTAAAATTCGAATTCCAGCaattattgtttc
aaaaagTCGCAAGTTATTAAAAATGATGACTACATACAACAACAGCTCAA
CCAGACAAAATGGTGGAATCTCTAATACCAATATCACGGCAACCGAAGCT
CTAAATGGTTTGTCAGATGGATTGTCATTGGCAACCAAATTAAGCATCTT
ATGTATCATCTTAACGTTCGCGTTGCTTGGAAAcgtcattttgattgttt
ctaTATTAAAGACACCACGCATGCGTAAATCATTGACCAATCAACTGATT
CTAAATCTAGCATTGTGTGACGTAGTAATCGTTATTACAGGTATTCCAGG
CGAAATCATTAACCAGACATTAGGAACCTGGGTACTAGGAGAGATCGGAT
GCCGTTTACTATATCCCGTATCAACCTACGCCGTAATTGCTGCCGTCACC
ACGTTACTTATGATCGGCGTAGACCGCTTCTTTGCGGCTTCCTATCCGTT
CCGGTACCGTACCCTGAAATCGAAATCACATCTTACGCTTGTTATAGTGC
ACGTGTACGCTCTCGCTTGCGTCGTCCCGTATGCCTTTCATTTGACGTTA
ACGGAAGATGACGGCGTCATTATATGCGACGAGACGTGGTCAGATTCTAC
AAGCACTATTTATACTATATTTTTATTCGTGATTCAATACGGCGCTCCTC
TTCCCATTATCGTTGCGTTATACGCTAAAACGTGGATACGGATCAAACAC
CAAAACGATAGCGTCATCAAAAACGCGGAGAGTATGCATCGTGGGAGTAT
GAAACGTCAAGACGATAGAAAACGGGAGAGTGGAGAATACGCCCGGCAAA
GTCTTTTATCCGTCGATGATAATTCGTTAGCCCCAAATCACAGCACCCGG
CGTCGATCACGGTCACTTTTAGATGCAATACGTGAAAGTTTCATTTCCCT
TACGGGGGAAGACGGGGAACACTCGCATAAATACGTTTCACAGACGGCGA
TAGATCGACATAAACAGACAACGAAACTGTTGAAGCTTTTCATCTGTGTT
ATTCTTGTGTTTGCAATTTGTATGTTACCTTATCATATCATTTGGTTAAA
TATCGCTATAACGGGtaaatcacttttatcaaatgaaaCTCATTATCTAA
TAGCGTATTTGTTAACATACGTTAATTCCGTAATTAATCCGATTATATAC
GGAATTCACCCACGTTTCCGTATTCTTTATAAAAATTGTATAAAAGAGGT
TTTAAATTGTTGTACTAATGTATGTTTCAAAAGACAATTTTATGAAACGG
AGGAGATACGTGGCAGTACTGCAGACTCTGTCTATTCCGTTTGGACACCA
GAAACATTTCGGAAACGGATTTCCCGGACGTTTTCCACCGGTTCAAAGTC
TTCACTGAAAAAGCGGAACAAAAGCCGATCAGACAGTTTACCTAAAAATG
GAACGTCTAGGCGACGGAGTAAGACTGTTCCACCGACAAATATTCCCGTC
AAAAAACGAAGTTTAACGATACCACAAATCACGGTGACGGATATTGAACA
CGATATAGGCGACGTTTTTACCGACGAGAACCGATTAAAAGTGTCGGTGT
CGTCGAGTTGTAGTAGCGAGAACGATGACGTTTTCGTTACGAACAATCAA
GCTTTAACAGAATATCGAGCATCTTTTTTTAACAGTAACGATGAAGGGAA
TTCGAAATTTGACCAACGTGGTTTATTATATATTGACAAAGATTTTGTCA
TGTCTAGAGACGGTTTACTATTACTTGAGACAATGTCCGAAAGTGATTGC
TAAATGAGAACTCTAGCTAATATTAAAATTCGAATTCCAGCaattattgt
ttcaaaaagTCGCAAGTTATTAAAAATGATGACTACATACAACAACAGCT
CAACCAGACAAAATGGTGGAATCTCTAATACCAATATCACGGCAACCGAA
GCTCTAAATGGTTTGTCAGATGGATTGTCATTGGCAACCAAATTAAGCAT
CTTATGTATCATCTTAACGTTCGCGTTGCTTGGAAAcgtcattttgattg
tttctaTATTAAAGACACCACGCATGCGTAAATCATTGACCAATCAACTG
ATTCTAAATCTAGCATTGTGTGACGTAGTAATCGTTATTACAGGTATTCC
AGGCGAAATCATTAACCAGACATTAGGAACCTGGGTACTAGGAGAGATCG
GATGCCGTTTACTATATCCCGTATCAACCTACGCCGTAATTGCTGCCGTC
ACCACGTTACTTATGATCGGCGTAGACCGCTTCTTTGCGGCTTCCTATCC
GTTCCGGTACCGTACCCTGAAATCGAAATCACATCTTACGCTTGTTATAG
TGCACGTGTACGCTCTCGCTTGCGTCGTCCCGTATGCCTTTCATTTGACG
TTAACGGAAGATGACGGCGTCATTATATGCGACGAGACGTGGTCAGATTC
TACAAGCACTATTTATACTATATTTTTATTCGTGATTCAATACGGCGCTC
CTCTTCCCATTATCGTTGCGTTATACGCTAAAACGTGGATACGGATCAAA
CACCAAAACGATAGCGTCATCAAAAACGCGGAGAGTATGCATCGTGGGAG
TATGAAACGTCAAGACGATAGAAAACGGGAGAGTGGAGAATACGCCCGGC
AAAGTCTTTTATCCGTCGATGATAATTCGTTAGCCCCAAATCACAGCACC
CGGCGTCGATCACGGTCACTTTTAGATGCAATACGTGAAAGTTTCATTTC
CCTTACGGGGGAAGACGGGGAACACTCGCATAAATACGTTTCACAGACGG
CGATAGATCGACATAAACAGACAACGAAACTGTTGAAGCTTTTCATCTGT
GTTATTCTTGTGTTTGCAATTTGTATGTTACCTTATCATATCATTTGGTT
AAATATCGCTATAACGGGtaaatcacttttatcaaatgaaaCTCATTATC
TAATAGCGTATTTGTTAACATACGTTAATTCCGTAATTAATCCGATTATA
TACGGAATTCACCCACGTTTCCGTATTCTTTATAAAAATTGTATAAAAGA
GGTTTTAAATTGTTGTACTAATGTATGTTTCAAAAGACAATTTTATGAAA
CGGAGGAGATACGTGGCAGTACTGCAGACTCTGTCTATTCCGTTTGGACA
CCAGAAACATTTCGGAAACGGATTTCCCGGACGTTTTCCACCGGTTCAAA
GTCTTCACTGAAAAAGCGGAACAAAAGCCGATCAGACAGTTTACCTAAAA
ATGGAACGTCTAGGCGACGGAGTAAGACTGTTCCACCGACAAATATTCCC
GTCAAAAAACGAAGTTTAACGATACCACAAATCACGGTGACGGATATTGA
ACACGATATAGGCGACGTTTTTACCGACGAGAACCGATTAAAAGTGTCGG
TGTCGTCGAGTTGTAGTAGCGAGAACGATGACGTTTTCGTTACGAACAAT
CAAGCTTTAACAGAATATCGAGCATCTTTTTTTAACAGTAACGATGAAGG
GAATTCGAAATTTGACCAACGTGGTTTATTATATATTGACAAAGATTTTG
TCATGTCTAGAGACGGTTTACTATTACTTGAGACAATGTCCGAAAGTGAT
TGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057737-exon-scaffold_298-1491911889:91409..91608 | TCONS_00057737-exon-scaffold_298-1491911889:91409..91608 | Clytia hemisphaerica | exon |
| TCONS_00057737-exon-scaffold_298-1510915933:91409..91608 | TCONS_00057737-exon-scaffold_298-1510915933:91409..91608 | Clytia hemisphaerica | exon |
| TCONS_00057737-exon-scaffold_298-1575043694:91409..91608 | TCONS_00057737-exon-scaffold_298-1575043694:91409..91608 | Clytia hemisphaerica | exon |
| TCONS_00057737-exon-scaffold_298-1491911889:97002..98946 | TCONS_00057737-exon-scaffold_298-1491911889:97002..98946 | Clytia hemisphaerica | exon |
| TCONS_00057737-exon-scaffold_298-1510915933:97002..98946 | TCONS_00057737-exon-scaffold_298-1510915933:97002..98946 | Clytia hemisphaerica | exon |
| TCONS_00057737-exon-scaffold_298-1575043694:97002..98946 | TCONS_00057737-exon-scaffold_298-1575043694:97002..98946 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_298 | supercontig | scaffold_298:91409..98946 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
BLAST of TCONS_00057737 vs. Swiss-Prot (Human)
Match: OX2R (Orexin receptor type 2 OS=Homo sapiens GN=HCRTR2 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.097e-25 Identity = 99/392 (25.26%), Postives = 173/392 (44.13%), Query Frame = 1
Query: 349 IILTFALLGNVILIVSILKTPRMRKSLTNQLILNLALCDVVIVITGIPGEIINQTLGTWVLGEIGCRLLYPVSTYAVIAAVTTLLMIGVDRFFAASYPFRYRTLKSKSHLTLVIVHVYALACVVPYA--------FHLTLTEDDGVIICDETWSDST-STIYTIFLFVIQYGAPLPIIV----ALYAKTWIRIKHQNDSVIKNAESMHRGSMKRQDDRKRESGEYARQSLLSVDDNSLAPNHSTRRRSRSLLDAIRESFISLTGEDGEHSHKYVSQTAIDRHKQTTKLLKLFICVILVFAICMLPYHIIWLNIAITGKSLLSNETHYLIAYL-----LTYVNSVINPIIYG-IHPRFRILYKNCIKEVLNCCTNVCFKRQFYETEEIRGSTA 1467
I+ AL+GNV++ V++ K MR ++TN I+NL+L DV++ IT +P ++ TW G+ C+++ + T +V +V TL I +DR++A +P +++ ++ ++VI+ + + ++P A F + +CDE W +Y I F++ Y APL ++V ++ K W R SV++ RK + + Q P T+ R ++ I++ I ++T ++L + V+LVFAIC LP I+ + + G + + + A+ L Y NS NPIIY + +FR + K +CC RQ E RG T+
Sbjct: 63 IVFVVALIGNVLVCVAVWKNHHMR-TVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVIIWIVSCIIMIPQAIVMECSTVFPGLANKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQIPGTSSVVQ---------------RKWKPLQPVSQ--------PRGPGQPTKSRMSAVAAEIKQ---------------------IRARRKTARMLMI---VLLVFAICYLPISILNVLKRVFGMFAHTEDRETVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEF----KAAFSCCCLGVHHRQ--EDRLTRGRTS 400
The following BLAST results are available for this feature:
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