TCONS_00057922 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00057922
Unique Name	TCONS_00057922
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1630

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_302:249890..253924+
coding sequence from alignment at scaffold_302:249890..253924+

transcript sequence

>TCONS_00057922 ID=TCONS_00057922|Name=TCONS_00057922|organism=Clytia hemisphaerica|type=transcript|length=1630bp
CTTGTAATCCTTATATTTTGGCCCTCGAGGCAAATAAATGTTCTAACATG
CGATgttctttttaaaaacatttagttGAATGATAGATGCTTTCCAGAAG
TACTGTCATTCATAAAGTAGGCAGCTTATTGACGTTTTACCGTGACCTGT
TCCAACCTTGACACCTATTTAAAGTATTaaaataacagaagaaaatATGA
TAACGCACATAATCAAAACAATGAACTTTGGCGATATAAACTTATGACTT
TTCAAAGCAAGAATATAAGAAACATCAGCAGAGTGCACTGAAAAACTTTT
GAGAAATATATGAACTAAAGTACGAGATGAAGTTGTTGAAATTCGCTTTC
GTGTTTTTGTTGGTTGTCTGTTTATTGACAACAGAGGCTGATgctaagaa
gaagaaaaagaagaaaacaaagaaaaacaagaagatCATTATTGACAATT
TCAACCGAAGAACTACAACGACAACGACAACAACTACAACTACACAAAAC
CTCCCTACAGAGCTTCCAATAACAGAGTCACCAGAACTTCCCAAAGATGA
AGGACCACAAATCTACGTTCCAGGAGATATTCTCGATAAATTATCCAATG
CTCAAAACGATGTTACAAGTTTTgtcaaaagtttcaaaccaGTTGGAGTC
CAGCAAAAAGGAAACGTGTTGAGTTACATTACTGGTGGTGAAAGCAATGA
AGTTATCAAATGGGCCAGTACCATTGATACAGGGTGCAAACCAAGAGAAA
AGCTTGAATGCATCGAAGAAAATAGTTACCTTGTATGGCCTGGAATTCAA
AAAGTGATGCGATGTGGAGAGTGTTGTGTTTTACCAGGACAAGTATGCAA
AcctacaaagaaaagaaaagaatatcaATACTTCTTCAAAATCCCAAGTG
ACGGTTCGCCTTGCGTCCCTATCAAACGTGAATTGACCCATCATGAAGCA
TGTGAATGCCAATGCAGAATTTCACCAGAAGACTGTTTACCCCAACAAAC
ATTCAATAAACATCATTGCCAATGTGAATGCAATCTCAAGCCACAACCAT
GTCCACCAGGAAAAAGTTGGTCATATCATACATGTGGCTGTGCTTGCAAT
GATAAAGAAAGAGCCTGTCTCAAGCTATCAAGAAAGATGATCTGGGATGA
CCGCAATTGTGAATGTGTTtgtaacaaagaaaaagaagcttGCACAGAAC
GTGGAAAATTACTGGATATGTCTGACTGCAGGTGCAAATGATATAACGGA
ATGACAAGGCACTACCATTGCACTATTCGAAAGAAGATAACTTTGAAACT
TAGTATCCAGAGATTGAGAACGAGATTTTATGACACAGTCGGTAAAAATG
TAATATTGTTTAAATGAGATATTTCACTCAAATTATATTTAcattgaatt
tgaaatattttctataaaaaaatcatcacaTAAATTTCTAAGGAACATAC
TTTTTTCATCGATTGTTTCATTCAAACCATTTCCTTTCCCTCCATTCTAA
CATAAAATCTTCGATCTGTTGAAAGTAGAAAGAAAAGAGATCAATAGTAA
AAAGGTCGCagtttctttcaaagcaaaaggTTCAGTAACTATcccaaaaa
tcattttcttatgTTTCTATAACTAATCAT

Run BLAST on NCBI

protein sequence of TCONS_00057922-protein

>TCONS_00057922-protein ID=TCONS_00057922-protein|Name=TCONS_00057922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MKLLKFAFVFLLVVCLLTTEADAKKKKKKKTKKNKKIIIDNFNRRTTTTT
TTTTTTQNLPTELPITESPELPKDEGPQIYVPGDILDKLSNAQNDVTSFV
KSFKPVGVQQKGNVLSYITGGESNEVIKWASTIDTGCKPREKLECIEENS
YLVWPGIQKVMRCGECCVLPGQVCKPTKKRKEYQYFFKIPSDGSPCVPIK
RELTHHEACECQCRISPEDCLPQQTFNKHHCQCECNLKPQPCPPGKSWSY
HTCGCACNDKERACLKLSRKMIWDDRNCECVCNKEKEACTERGKLLDMSD
CRCK

Run BLAST on NCBI

transcript from alignment at scaffold_302:249890..253924+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00057922 ID=TCONS_00057922|Name=TCONS_00057922|organism=Clytia hemisphaerica|type=transcript|length=4035bp|location=Sequence derived from alignment at scaffold_302:249890..253924+ (Clytia hemisphaerica)
CTTGTAATCCTTATATTTTGGCCCTCGAGGCAAATAAATGTTCTAACATG
CGATgttctttttaaaaacatttagttGAATGATAGATGCTTTCCAGAAG
TACTGTCATTCATAAAGTAGGCAGCTTATTGACGTTTTACCGTGACCTGT
TCCAACCTTGACACCTATTTAAAGTATTaaaataacagaagaaaatATGA
TAACGCACATAATCAAAACAATGAACTTTGGCGATATAAACTTATGACTT
TTCAAAGCAAGAATATAAGAAACATCAGCAGAGTGCACTGAAAAACTTTT
GAGAAATATATGAACTAAAGTACGAGATGAAGTTGTTGAAATTCGCTTTC
GTGTTTTTGTTGGTTGTCTGTTTATTGACAACAGAGGCTGATgctaagaa
gaagaaaaagaagaaaacaaagaaaaacaagaagatCATTATTGACAATT
TCAACCGAAGAACTACAACGACAACGACAACAACTACAACTACACAAAAC
CTCCCTACAGAGCTTCCAATAACAGAGTCACCAGAACTTCCCAAAGATGA
AGGACCACAAATCTACGTATCTactattattgttattattattcaATCTA
TATATGCCTTCccattctaattgttagagtaggtaaaaagtcaacaaaac
aaaattttgcccTGGAACTTTTTGCAAAGAAATCATCAAGCATTCATAAC
TAGAATAGGCAGGATTATCGACGGTCTAACTAGAGCTAAGTTACATCAAC
GAGCAACACTTTCCTCAAATCCTATCTCACTCAAGACAATCAAGAACTGA
GATCACATTTCAATAGTGCGTTAAGGCAGCTTGTAAGAGTATTTTATGTA
AAACCCTGTCCCAATATTTTCGAGCGGCATGTAAGTATTACCTTAATATT
TATTCATGTTTAGGTTCCAGGAGATATTCTCGATAAATTATCCAATGCTC
AAAACGATGTTACAAGTTTTgtcaaaagtttcaaaccaGTTGGAGTCCAG
CAAAAAGGTACAACGACTTATTTAATCTCAAACTTTCgtcaaaaaacgca
aaaataaACTTTCATAAACCAGTCATTTTGTTTAccattttaatgatttt
tattataattatttAAAAGTTTCTATCTCGCCTTTTCGAGCTGTTGACGT
ACAGGGATTAATTTTCCTTCCCTTGTAGGAAACGTGTTGAGTTACATTAC
TGGTGGTGAAAGCAATGAAGTTATCAAATGGGCCAGTACCAGTAAGTAtt
caaaaattcatgatattcatgacgtaatcttttctacgGAAACACTCTGG
TTTTGGCCAGTAATGGTAAAAGAAACTTAAGAAAGTTATGCtaaagaaaa
attgtttaaaaatttgcCACTAATGGCAAAGAAACGTAAGgtaatgaata
tcatgaatagaaaaaTACAATTAAGCAAAAGTCAGTCTTTGTTACGAAAG
AATGACACAATAGTTTGTAGAGGGGAATGAGCTCCCCCAGGTTTATTTCA
CCCCCCCCCGTGTTGTANTTTAccattttaatgatttttaatataattat
tTAAAAGTTTCTATCTCGCCTTTTCGAGCTGTTGACGTACAGGGATTAAT
TTTCCTTCCCTTGTAGGAAACGTGTTGAGTTACATTACTGGTGGTGAAAG
CAATGAAGTTATCAAATGGGCCAGTACCAGTAAGTAttcaaaaattcatg
atattcatgacgtaatcttttctacgGAAACACTCTGGTTTTGGCCAGTA
ATGGTAAAAGAAACTTAAGAAAGTTATGCtaaagaaaaattgtttaaaaa
tttgcCACTAATGGCAAAGAAACGTAAGgtaatgaatatcatgaatagaa
aaaTACAATTAAGCAAAAGTCAGTCTTTGTTACGAAAGAATGACACAATA
GTTTGTAGAGGGGAATGAGCTCCCCCAGGTTTATTTCACCCCCCCCCGTG
TTGTATTTTACCACGAAAAGTATGCAAACCCACAAAGACAAGAAATTAGT
CAAGGTGGATCTTTATCTAATTATCAGCTTGTAAAGAATCATACTATATG
GCTAAAATAGTCGAGTCACTGATCTCTTAAATATCTGACTTCACattcca
aatatttgacaatTTATCACAGTTGATACAGGGTGCAAACCAAGAGAAAA
GCTTGAATGCATCGAAGAAAATAGTTACCTTGTATGGCCTGGAATTCAAA
AAGTGATGCGATGTGGAGAGTGTTGTGTTTTACCAGGACAAGTATGCAAA
cctacaaagaaaagaaaagaatatcaATACTTCTTCAAAATCCCAAGTGA
CGGTAAATAAGCTATTTGGGTGATTTTAAGTTCGGAAAATGCACCAAGAA
TCATTCATTTAATTAATGTTAATgttataaaagtaaaaattaaaCTTGCA
AAGAAACccttcgaaaaaaaatcttttaaatatttGGACGAACTAAGacc
agcccccccccctccttgaaaaatgaaaaaacactccATTAgacccctgg
aaatgttcgtccacccccaccccctgtatggatataaaatggaatggcct
aTTGTCACTCTAAAATTCAGGAGAAATTTTTCTCGCAATGCCTAAAGAGG
TATTTCTTAAAGAATGTCATAAAAACTGAAAATCATTTCTGACCTTCTTT
GTCTCGTCAGGTTCGCCTTGCGTCCCTATCAAACGTGAATTGACCCATCA
TGAAGCATGTGAATGCCAATGCAGAATTTCACCAGAAGACTGTTTACCCC
AACAAACATTCAATAAACATCATTGCCAATGTGAATGCAATCTCAAGCCA
CAACCATGTCCACCAGGAAAAAGTGTAAGTCATTGTTTTGTAATATTGTT
ATCCTTTGAAACATTTAAAGTTGAATTGTTTAAAGTTGGAATCAAATatc
ataaaaatgtaaataccgggtgtcccagaaaaaagtccccctatttgaag
tgaattttctcgcgTTCTATGAACTGTTGAAGAAACGATCCATTTGCATT
GAAAAGAGGAAGGATAGACTTAAAGTTTGAGGGgtcattttgttaaattt
ggtcaactagataAAAAGTTGTggcctaaatgctaaaacattacttaaaa
aagaaaagttaaaaaaaagcgAAATTTGACAGACAAAccctcaaaattta
tttttatccttCCTCCTTCCAATGCAAAAGGATCAATTCTTTAACAGTTT
ACCGAACTCAAAATAATTCACCTCAAAGAGGGGACTTTTTTCTGAGACAC
CCGGCACCTTTTTAATACACATAATTCTTTCACATGTTTCTCGCAAGGCT
AGTTGAACAGGTTTTAGGAATTTTAAAGGATCTTGCAAATTTCGTTGCAC
TTTCGGAGGCTCAATTCGGTTTTAATGACATCCTACTATCAGTTCTGTTC
TTTTTCTAAAGATTCAATGgaattattatttaaaaatttgagcATGTCTT
ACAAGCCCTCATTTCTTTGCAGTGGTCATATCATACATGTGGCTGTGCTT
GCAATGATAAAGAAAGAGCCTGTCTCAAGCTATCAAGAAAGATGATCTGG
GATGACCGCAATTGTGAATGTGTTtgtaacaaagaaaaagaagcttGCAC
AGAACGTGGAAAATTACTGGATATGTCTGACTGCAGGTGCAAATGATATA
ACGGAATGACAAGGCACTACCATTGCACTATTCGAAAGAAGATAACTTTG
AAACTTAGTATCCAGAGATTGAGAACGAGATTTTATGACACAGTCGGTAA
AAATGTAATATTGTTTAAATGAGATATTTCACTCAAATTATATTTAcatt
gaatttgaaatattttctataaaaaaatcatcacaTAAATTTCTAAGGAA
CATACTTTTTTCATCGATTGTTTCATTCAAACCATTTCCTTTCCCTCCAT
TCTAACATAAAATCTTCGATCTGTTGAAAGTAGAAAGAAAAGAGATCAAT
AGTAAAAAGGTCGCagtttctttcaaagcaaaaggTTCAGTAACTATccc
aaaaatcattttcttatgTTTCTATAACTAATCAT

Coding sequence (CDS) from alignment at scaffold_302:249890..253924+

>TCONS_00057922 ID=TCONS_00057922|Name=TCONS_00057922|organism=Clytia hemisphaerica|type=CDS|length=5490bp|location=Sequence derived from alignment at scaffold_302:249890..253924+ (Clytia hemisphaerica)
ATGAAGTTGTTGAAATTCGCTTTCGTGTTTTTGTTGGTTGTCTGTTTATT
GACAACAGAGGCTGATgctaagaagaagaaaaagaagaaaacaaagaaaa
acaagaagatCATTATTGACAATTTCAACCGAAGAACTACAACGACAACG
ACAACAACTACAACTACACAAAACCTCCCTACAGAGCTTCCAATAACAGA
GTCACCAGAACTTCCCAAAGATGAAGGACCACAAATCTACGTTCCAGGAG
ATATTCTCGATAAATTATCCAATGCTCAAAACGATGTTACAAGTTTTgtc
aaaagtttcaaaccaGTTGGAGTCCAGCAAAAAGGAAACGTGTTGAGTTA
CATTACTGGTGGTGAAAGCAATGAAGTTATCAAATGGGCCAGTACCATTG
ATACAGGGTGCAAACCAAGAGAAAAGCTTGAATGCATCGAAGAAAATAGT
TACCTTGTATGGCCTGGAATTCAAAAAGTGATGCGATGTGGAGAGTGTTG
TGTTTTACCAGGACAAGTATGCAAAcctacaaagaaaagaaaagaatatc
aATACTTCTTCAAAATCCCAAGTGACGGTTCGCCTTGCGTCCCTATCAAA
CGTGAATTGACCCATCATGAAGCATGTGAATGCCAATGCAGAATTTCACC
AGAAGACTGTTTACCCCAACAAACATTCAATAAACATCATTGCCAATGTG
AATGCAATCTCAAGCCACAACCATGTCCACCAGGAAAAAGTTGGTCATAT
CATACATGTGGCTGTGCTTGCAATGATAAAGAAAGAGCCTGTCTCAAGCT
ATCAAGAAAGATGATCTGGGATGACCGCAATTGTGAATGTGTTtgtaaca
aagaaaaagaagcttGCACAGAACGTGGAAAATTACTGGATATGTCTGAC
TGCAGGTGCAAATGAATGAAGTTGTTGAAATTCGCTTTCGTGTTTTTGTT
GGTTGTCTGTTTATTGACAACAGAGGCTGATgctaagaagaagaaaaaga
agaaaacaaagaaaaacaagaagatCATTATTGACAATTTCAACCGAAGA
ACTACAACGACAACGACAACAACTACAACTACACAAAACCTCCCTACAGA
GCTTCCAATAACAGAGTCACCAGAACTTCCCAAAGATGAAGGACCACAAA
TCTACGTTCCAGGAGATATTCTCGATAAATTATCCAATGCTCAAAACGAT
GTTACAAGTTTTgtcaaaagtttcaaaccaGTTGGAGTCCAGCAAAAAGG
AAACGTGTTGAGTTACATTACTGGTGGTGAAAGCAATGAAGTTATCAAAT
GGGCCAGTACCATTGATACAGGGTGCAAACCAAGAGAAAAGCTTGAATGC
ATCGAAGAAAATAGTTACCTTGTATGGCCTGGAATTCAAAAAGTGATGCG
ATGTGGAGAGTGTTGTGTTTTACCAGGACAAGTATGCAAAcctacaaaga
aaagaaaagaatatcaATACTTCTTCAAAATCCCAAGTGACGGTTCGCCT
TGCGTCCCTATCAAACGTGAATTGACCCATCATGAAGCATGTGAATGCCA
ATGCAGAATTTCACCAGAAGACTGTTTACCCCAACAAACATTCAATAAAC
ATCATTGCCAATGTGAATGCAATCTCAAGCCACAACCATGTCCACCAGGA
AAAAGTTGGTCATATCATACATGTGGCTGTGCTTGCAATGATAAAGAAAG
AGCCTGTCTCAAGCTATCAAGAAAGATGATCTGGGATGACCGCAATTGTG
AATGTGTTtgtaacaaagaaaaagaagcttGCACAGAACGTGGAAAATTA
CTGGATATGTCTGACTGCAGGTGCAAATGAATGAAGTTGTTGAAATTCGC
TTTCGTGTTTTTGTTGGTTGTCTGTTTATTGACAACAGAGGCTGATgcta
agaagaagaaaaagaagaaaacaaagaaaaacaagaagatCATTATTGAC
AATTTCAACCGAAGAACTACAACGACAACGACAACAACTACAACTACACA
AAACCTCCCTACAGAGCTTCCAATAACAGAGTCACCAGAACTTCCCAAAG
ATGAAGGACCACAAATCTACGTTCCAGGAGATATTCTCGATAAATTATCC
AATGCTCAAAACGATGTTACAAGTTTTgtcaaaagtttcaaaccaGTTGG
AGTCCAGCAAAAAGGAAACGTGTTGAGTTACATTACTGGTGGTGAAAGCA
ATGAAGTTATCAAATGGGCCAGTACCATTGATACAGGGTGCAAACCAAGA
GAAAAGCTTGAATGCATCGAAGAAAATAGTTACCTTGTATGGCCTGGAAT
TCAAAAAGTGATGCGATGTGGAGAGTGTTGTGTTTTACCAGGACAAGTAT
GCAAAcctacaaagaaaagaaaagaatatcaATACTTCTTCAAAATCCCA
AGTGACGGTTCGCCTTGCGTCCCTATCAAACGTGAATTGACCCATCATGA
AGCATGTGAATGCCAATGCAGAATTTCACCAGAAGACTGTTTACCCCAAC
AAACATTCAATAAACATCATTGCCAATGTGAATGCAATCTCAAGCCACAA
CCATGTCCACCAGGAAAAAGTTGGTCATATCATACATGTGGCTGTGCTTG
CAATGATAAAGAAAGAGCCTGTCTCAAGCTATCAAGAAAGATGATCTGGG
ATGACCGCAATTGTGAATGTGTTtgtaacaaagaaaaagaagcttGCACA
GAACGTGGAAAATTACTGGATATGTCTGACTGCAGGTGCAAATGAATGAA
GTTGTTGAAATTCGCTTTCGTGTTTTTGTTGGTTGTCTGTTTATTGACAA
CAGAGGCTGATgctaagaagaagaaaaagaagaaaacaaagaaaaacaag
aagatCATTATTGACAATTTCAACCGAAGAACTACAACGACAACGACAAC
AACTACAACTACACAAAACCTCCCTACAGAGCTTCCAATAACAGAGTCAC
CAGAACTTCCCAAAGATGAAGGACCACAAATCTACGTTCCAGGAGATATT
CTCGATAAATTATCCAATGCTCAAAACGATGTTACAAGTTTTgtcaaaag
tttcaaaccaGTTGGAGTCCAGCAAAAAGGAAACGTGTTGAGTTACATTA
CTGGTGGTGAAAGCAATGAAGTTATCAAATGGGCCAGTACCATTGATACA
GGGTGCAAACCAAGAGAAAAGCTTGAATGCATCGAAGAAAATAGTTACCT
TGTATGGCCTGGAATTCAAAAAGTGATGCGATGTGGAGAGTGTTGTGTTT
TACCAGGACAAGTATGCAAAcctacaaagaaaagaaaagaatatcaATAC
TTCTTCAAAATCCCAAGTGACGGTTCGCCTTGCGTCCCTATCAAACGTGA
ATTGACCCATCATGAAGCATGTGAATGCCAATGCAGAATTTCACCAGAAG
ACTGTTTACCCCAACAAACATTCAATAAACATCATTGCCAATGTGAATGC
AATCTCAAGCCACAACCATGTCCACCAGGAAAAAGTTGGTCATATCATAC
ATGTGGCTGTGCTTGCAATGATAAAGAAAGAGCCTGTCTCAAGCTATCAA
GAAAGATGATCTGGGATGACCGCAATTGTGAATGTGTTtgtaacaaagaa
aaagaagcttGCACAGAACGTGGAAAATTACTGGATATGTCTGACTGCAG
GTGCAAATGAATGAAGTTGTTGAAATTCGCTTTCGTGTTTTTGTTGGTTG
TCTGTTTATTGACAACAGAGGCTGATgctaagaagaagaaaaagaagaaa
acaaagaaaaacaagaagatCATTATTGACAATTTCAACCGAAGAACTAC
AACGACAACGACAACAACTACAACTACACAAAACCTCCCTACAGAGCTTC
CAATAACAGAGTCACCAGAACTTCCCAAAGATGAAGGACCACAAATCTAC
GTTCCAGGAGATATTCTCGATAAATTATCCAATGCTCAAAACGATGTTAC
AAGTTTTgtcaaaagtttcaaaccaGTTGGAGTCCAGCAAAAAGGAAACG
TGTTGAGTTACATTACTGGTGGTGAAAGCAATGAAGTTATCAAATGGGCC
AGTACCATTGATACAGGGTGCAAACCAAGAGAAAAGCTTGAATGCATCGA
AGAAAATAGTTACCTTGTATGGCCTGGAATTCAAAAAGTGATGCGATGTG
GAGAGTGTTGTGTTTTACCAGGACAAGTATGCAAAcctacaaagaaaaga
aaagaatatcaATACTTCTTCAAAATCCCAAGTGACGGTTCGCCTTGCGT
CCCTATCAAACGTGAATTGACCCATCATGAAGCATGTGAATGCCAATGCA
GAATTTCACCAGAAGACTGTTTACCCCAACAAACATTCAATAAACATCAT
TGCCAATGTGAATGCAATCTCAAGCCACAACCATGTCCACCAGGAAAAAG
TTGGTCATATCATACATGTGGCTGTGCTTGCAATGATAAAGAAAGAGCCT
GTCTCAAGCTATCAAGAAAGATGATCTGGGATGACCGCAATTGTGAATGT
GTTtgtaacaaagaaaaagaagcttGCACAGAACGTGGAAAATTACTGGA
TATGTCTGACTGCAGGTGCAAATGAATGAAGTTGTTGAAATTCGCTTTCG
TGTTTTTGTTGGTTGTCTGTTTATTGACAACAGAGGCTGATgctaagaag
aagaaaaagaagaaaacaaagaaaaacaagaagatCATTATTGACAATTT
CAACCGAAGAACTACAACGACAACGACAACAACTACAACTACACAAAACC
TCCCTACAGAGCTTCCAATAACAGAGTCACCAGAACTTCCCAAAGATGAA
GGACCACAAATCTACGTTCCAGGAGATATTCTCGATAAATTATCCAATGC
TCAAAACGATGTTACAAGTTTTgtcaaaagtttcaaaccaGTTGGAGTCC
AGCAAAAAGGAAACGTGTTGAGTTACATTACTGGTGGTGAAAGCAATGAA
GTTATCAAATGGGCCAGTACCATTGATACAGGGTGCAAACCAAGAGAAAA
GCTTGAATGCATCGAAGAAAATAGTTACCTTGTATGGCCTGGAATTCAAA
AAGTGATGCGATGTGGAGAGTGTTGTGTTTTACCAGGACAAGTATGCAAA
cctacaaagaaaagaaaagaatatcaATACTTCTTCAAAATCCCAAGTGA
CGGTTCGCCTTGCGTCCCTATCAAACGTGAATTGACCCATCATGAAGCAT
GTGAATGCCAATGCAGAATTTCACCAGAAGACTGTTTACCCCAACAAACA
TTCAATAAACATCATTGCCAATGTGAATGCAATCTCAAGCCACAACCATG
TCCACCAGGAAAAAGTTGGTCATATCATACATGTGGCTGTGCTTGCAATG
ATAAAGAAAGAGCCTGTCTCAAGCTATCAAGAAAGATGATCTGGGATGAC
CGCAATTGTGAATGTGTTtgtaacaaagaaaaagaagcttGCACAGAACG
TGGAAAATTACTGGATATGTCTGACTGCAGGTGCAAATGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_036524	XLOC_036524	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00057922-protein	TCONS_00057922-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_302	supercontig	scaffold_302:249890..253924 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.153539	0.0748733	0.087151	0	0.583912	0.646389	1.34477	1.75127	1.49176	0.946698	2.7428	2.05694	0.250975	0.41824	0.215028	0.354059	42.3865	59.8009	0.134167	0.196533	126.664	120.08	64.9223	70.9873	68.7349	84.7922	18.0348	28.8091	311.398	404.658

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000072	PDGF/VEGF_dom
IPR029034	Cystine-knot_cytokine
IPR027928	VEGF_C
IPR004153	CXCXC_repeat

Vocabulary: **Molecular Function**
Term	Definition
GO:0008083	growth factor activity
GO:0008201	heparin binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0008083	growth factor activity
molecular_function	GO:0008201	heparin binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00057922 vs. Swiss-Prot (Human)

BLAST of TCONS_00057922 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00057922 (transcript) - C. hemisphaerica