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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058008 ID=TCONS_00058008|Name=TCONS_00058008|organism=Clytia hemisphaerica|type=transcript|length=1625bp
CGCAAAATGAAGACGTTACTTGTGACCGTTTGCGTACTTTTGAGCTGCGC
TGCTTCTGTTCAAAGTCATGAAGAATTGAACGATTTTTTTCGTTTCTTCA
AATTTGATTATGGGCGTGGCAAAGAGAAAGAGTATCCGGAAGTCCCTTAT
GCGGGTAGCAAAGATCCTCGCGTCAACATCGCTCAACTTGCCAAACTCAA
GGGTAATTATTACTTACATGAATTAAGCAAGAAGAGTGGTTTAGGTGTCT
ACAAACTGAAGTTATTCGAAGATCGTATTATCCTTGCAGACCCTGTAGCC
ATCAAAGCTGTCTATGATACAGAGTTAACGGAGAAATCAACGGATTTTGG
TTTGGCGCTGATGAGTGGGGACATCGTTAAAGGATATTCAGCACCTATCG
CTGTCAATGGTTACGATCACATGAAGAAGAAGAATGGAATGTGGAGGATT
TTGAAAAGAGCCGAACAAAAATACGGATATGAAGGGTTGTATAAAATCAT
GCAGAAGAATTGGAGATTTATTCTCCCTATGATCAAGGATAATCAGACCA
ATGTTGacaatttgatcgacgtttttaCTGTTCGTACCATGACTGAATTC
TACTTCGATAAACCCTTCGACTTGAGCCCTAAAGTCTTTTTGTTGTGGTT
TCTGAGAGGTTTGATTCCAAAGAACAAACCTAACTTAAAGTTGGATGCTT
TAGGTAAGCAAGTGACGAAACAAATGTATGCTTATATTGATAGTACACCG
TGGGCGAAGAAAGTTTTACCGGGAATTCTGAAGGAGGACGGACGTGGTGC
AGATACGTTGAAAGGTGAAGCACTCCAATTGGCCTTTATTTTTTCTGTCT
TCAGCTTAAGGAGTGGGCTGTCCTCCACCATCCCCTTATTTTTGAATTTG
GATGACCAAACTAAAGACGCCATCTTAAAAGAAGTCAATGATTTTCACGG
AAGCAATCAAACTGTTGGTCAAAAATTGAAAGACTTGGACGTTCTTGACC
GCTTTGTGATTGAAGTTTGGCGCTACCATACACCAGTCAGTCTTGTCTTC
GGGAAAGCcaagaaagattttgttttggaTTCTCTTCAAGGAAGATACAC
TGTCAAGAAAGGTACCTACATGACTGCTTACTCTTACGGAGCTCAGCGAA
ACCCGGAAACTTTCCGTTTACCCAGCCTGTTTTCTACGACCGGTGACCAG
AAGCAtatcaaagaaaatttcttcGCTTTTGGAGGTCCCTACAATCAAAA
ACCGAATTTGAGGAATCGGAAATGTGTGGGTCAGTATGCGGCACTGAACA
TCGCAAAGATGTTCGTCACGTTCTTCGCCAACTGTGAGATCGATCCAGCG
TCAAGTATCAAGTTTACAGAAACCACCGCCAACCGCCCCGTCGCCAGTGA
TGAACCTCTCAGAGTCAAAAAACTCAAATGTTGAATTATGATGTAATTTA
TTCTTTCCgaagaaagatatttttatagATCTATTAAAAAAACGAACATA
TCTTtatataaaatttatgattttaatatttcaatttcaaaagcctattc
aatcatcaatcatcttgggaattgaatatctattgataGAACAGAGAAAT
TTAATCTTATTTTAATTATTCCAAG Run BLAST on NCBI protein sequence of TCONS_00058008-protein >TCONS_00058008-protein ID=TCONS_00058008-protein|Name=TCONS_00058008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
RKMKTLLVTVCVLLSCAASVQSHEELNDFFRFFKFDYGRGKEKEYPEVPY
AGSKDPRVNIAQLAKLKGNYYLHELSKKSGLGVYKLKLFEDRIILADPVA
IKAVYDTELTEKSTDFGLALMSGDIVKGYSAPIAVNGYDHMKKKNGMWRI
LKRAEQKYGYEGLYKIMQKNWRFILPMIKDNQTNVDNLIDVFTVRTMTEF
YFDKPFDLSPKVFLLWFLRGLIPKNKPNLKLDALGKQVTKQMYAYIDSTP
WAKKVLPGILKEDGRGADTLKGEALQLAFIFSVFSLRSGLSSTIPLFLNL
DDQTKDAILKEVNDFHGSNQTVGQKLKDLDVLDRFVIEVWRYHTPVSLVF
GKAKKDFVLDSLQGRYTVKKGTYMTAYSYGAQRNPETFRLPSLFSTTGDQ
KHIKENFFAFGGPYNQKPNLRNRKCVGQYAALNIAKMFVTFFANCEIDPA
SSIKFTETTANRPVASDEPLRVKKLKC Run BLAST on NCBI transcript from alignment at scaffold_302:428876..430500 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058008 ID=TCONS_00058008|Name=TCONS_00058008|organism=Clytia hemisphaerica|type=transcript|length=1625bp|location=Sequence derived from alignment at scaffold_302:428876..430500 (Clytia hemisphaerica)
CTTGGAATAATTAAAATAAGATTAAATTTCTCTGTTCtatcaatagatat
tcaattcccaagatgattgatgattgaataggcttttgaaattgaaatat
taaaatcataaattttatataAAGATATGTTCGTTTTTTTAATAGATcta
taaaaatatctttcttcGGAAAGAATAAATTACATCATAATTCAACATTT
GAGTTTTTTGACTCTGAGAGGTTCATCACTGGCGACGGGGCGGTTGGCGG
TGGTTTCTGTAAACTTGATACTTGACGCTGGATCGATCTCACAGTTGGCG
AAGAACGTGACGAACATCTTTGCGATGTTCAGTGCCGCATACTGACCCAC
ACATTTCCGATTCCTCAAATTCGGTTTTTGATTGTAGGGACCTCCAAAAG
CgaagaaattttctttgataTGCTTCTGGTCACCGGTCGTAGAAAACAGG
CTGGGTAAACGGAAAGTTTCCGGGTTTCGCTGAGCTCCGTAAGAGTAAGC
AGTCATGTAGGTACCTTTCTTGACAGTGTATCTTCCTTGAAGAGAAtcca
aaacaaaatctttcttgGCTTTCCCGAAGACAAGACTGACTGGTGTATGG
TAGCGCCAAACTTCAATCACAAAGCGGTCAAGAACGTCCAAGTCTTTCAA
TTTTTGACCAACAGTTTGATTGCTTCCGTGAAAATCATTGACTTCTTTTA
AGATGGCGTCTTTAGTTTGGTCATCCAAATTCAAAAATAAGGGGATGGTG
GAGGACAGCCCACTCCTTAAGCTGAAGACAGAAAAAATAAAGGCCAATTG
GAGTGCTTCACCTTTCAACGTATCTGCACCACGTCCGTCCTCCTTCAGAA
TTCCCGGTAAAACTTTCTTCGCCCACGGTGTACTATCAATATAAGCATAC
ATTTGTTTCGTCACTTGCTTACCTAAAGCATCCAACTTTAAGTTAGGTTT
GTTCTTTGGAATCAAACCTCTCAGAAACCACAACAAAAAGACTTTAGGGC
TCAAGTCGAAGGGTTTATCGAAGTAGAATTCAGTCATGGTACGAACAGta
aaaacgtcgatcaaattgtCAACATTGGTCTGATTATCCTTGATCATAGG
GAGAATAAATCTCCAATTCTTCTGCATGATTTTATACAACCCTTCATATC
CGTATTTTTGTTCGGCTCTTTTCAAAATCCTCCACATTCCATTCTTCTTC
TTCATGTGATCGTAACCATTGACAGCGATAGGTGCTGAATATCCTTTAAC
GATGTCCCCACTCATCAGCGCCAAACCAAAATCCGTTGATTTCTCCGTTA
ACTCTGTATCATAGACAGCTTTGATGGCTACAGGGTCTGCAAGGATAATA
CGATCTTCGAATAACTTCAGTTTGTAGACACCTAAACCACTCTTCTTGCT
TAATTCATGTAAGTAATAATTACCCTTGAGTTTGGCAAGTTGAGCGATGT
TGACGCGAGGATCTTTGCTACCCGCATAAGGGACTTCCGGATACTCTTTC
TCTTTGCCACGCCCATAATCAAATTTGAAGAAACGAAAAAAATCGTTCAA
TTCTTCATGACTTTGAACAGAAGCAGCGCAGCTCAAAAGTACGCAAACGG
TCACAAGTAACGTCTTCATTTTGCG Coding sequence (CDS) from alignment at scaffold_302:428876..430500 >TCONS_00058008 ID=TCONS_00058008|Name=TCONS_00058008|organism=Clytia hemisphaerica|type=CDS|length=1434bp|location=Sequence derived from alignment at scaffold_302:428876..430500 (Clytia hemisphaerica)
TCAACATTTGAGTTTTTTGACTCTGAGAGGTTCATCACTGGCGACGGGGC
GGTTGGCGGTGGTTTCTGTAAACTTGATACTTGACGCTGGATCGATCTCA
CAGTTGGCGAAGAACGTGACGAACATCTTTGCGATGTTCAGTGCCGCATA
CTGACCCACACATTTCCGATTCCTCAAATTCGGTTTTTGATTGTAGGGAC
CTCCAAAAGCgaagaaattttctttgataTGCTTCTGGTCACCGGTCGTA
GAAAACAGGCTGGGTAAACGGAAAGTTTCCGGGTTTCGCTGAGCTCCGTA
AGAGTAAGCAGTCATGTAGGTACCTTTCTTGACAGTGTATCTTCCTTGAA
GAGAAtccaaaacaaaatctttcttgGCTTTCCCGAAGACAAGACTGACT
GGTGTATGGTAGCGCCAAACTTCAATCACAAAGCGGTCAAGAACGTCCAA
GTCTTTCAATTTTTGACCAACAGTTTGATTGCTTCCGTGAAAATCATTGA
CTTCTTTTAAGATGGCGTCTTTAGTTTGGTCATCCAAATTCAAAAATAAG
GGGATGGTGGAGGACAGCCCACTCCTTAAGCTGAAGACAGAAAAAATAAA
GGCCAATTGGAGTGCTTCACCTTTCAACGTATCTGCACCACGTCCGTCCT
CCTTCAGAATTCCCGGTAAAACTTTCTTCGCCCACGGTGTACTATCAATA
TAAGCATACATTTGTTTCGTCACTTGCTTACCTAAAGCATCCAACTTTAA
GTTAGGTTTGTTCTTTGGAATCAAACCTCTCAGAAACCACAACAAAAAGA
CTTTAGGGCTCAAGTCGAAGGGTTTATCGAAGTAGAATTCAGTCATGGTA
CGAACAGtaaaaacgtcgatcaaattgtCAACATTGGTCTGATTATCCTT
GATCATAGGGAGAATAAATCTCCAATTCTTCTGCATGATTTTATACAACC
CTTCATATCCGTATTTTTGTTCGGCTCTTTTCAAAATCCTCCACATTCCA
TTCTTCTTCTTCATGTGATCGTAACCATTGACAGCGATAGGTGCTGAATA
TCCTTTAACGATGTCCCCACTCATCAGCGCCAAACCAAAATCCGTTGATT
TCTCCGTTAACTCTGTATCATAGACAGCTTTGATGGCTACAGGGTCTGCA
AGGATAATACGATCTTCGAATAACTTCAGTTTGTAGACACCTAAACCACT
CTTCTTGCTTAATTCATGTAAGTAATAATTACCCTTGAGTTTGGCAAGTT
GAGCGATGTTGACGCGAGGATCTTTGCTACCCGCATAAGGGACTTCCGGA
TACTCTTTCTCTTTGCCACGCCCATAATCAAATTTGAAGAAACGAAAAAA
ATCGTTCAATTCTTCATGACTTTGAACAGAAGCAGCGCAGCTCAAAAGTA
CGCAAACGGTCACAAGTAACGTCTTCATTTTGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058008-exon-scaffold_302-1491911889:428876..430500 | TCONS_00058008-exon-scaffold_302-1491911889:428876..430500 | Clytia hemisphaerica | exon |
| TCONS_00058008-exon-scaffold_302-1510915933:428876..430500 | TCONS_00058008-exon-scaffold_302-1510915933:428876..430500 | Clytia hemisphaerica | exon |
| TCONS_00058008-exon-scaffold_302-1575043694:428876..430500 | TCONS_00058008-exon-scaffold_302-1575043694:428876..430500 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_302 | supercontig | scaffold_302:428876..430500 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001128 | Cyt_P450 |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
The following BLAST results are available for this feature:
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