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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058149 ID=TCONS_00058149|Name=TCONS_00058149|organism=Clytia hemisphaerica|type=transcript|length=2076bp
TGTAGCTATCATAAAATCTTAAATATGTGTTCGTGTTTTCGCTTTTTCCA
AAAAGCTGCCAGTGGTTGCATGCTGTTGAGTATTGGAGCTTTATTGTTTT
GTGGATCCATTGAATATTGGTGGTCTACAAAGTCCAGTGATGTTGGTTTG
TGGAAAACATGCAGTGATTTCGTGGTCTCGTCACGATTGTGTCTTCGAAG
AGGTGATCTGTTGGAGTTCAAAAGCAAAGAACTCAAAGTTGCTGGAATGA
AACTCGAGATAGGTGGAAGAAAATTGGATATTGTGTTTGTTTCATTATTG
GTTGCCGTGGTGACGGCTATCATTCACCTCATATTGTTGGTGAGGTCAAT
GTGTCAAAGACATCCATCGAAATCAATCATCCTTGTTGGAACTGTTTTTT
TATCCTTTGGAGttGCTGCATCAATTTTCGGTACAATTTGGGCGTTAGTG
ATGATCTCTAAAGACAACTTAGGATGGGCGTTTTATGTTTTGTATGGGGC
GGATGGAATGCTTCTGTTAGGTTTAATGTGTTCAATCATTACATTATGTT
CGCGTACACCTGGTGTTTACATCACAACAAGCCGAGATGATGAGGTTGCT
ATGCTGAAACGTTGATCGAGCTAATTGCAACAAGAGCCACACATTTGTTG
ATTACTTTGTCTTCCCACTTTGCGAGGGACACACATTGGATTAACAAGCT
CGAACCCAGtcctttgtttgctttttgatgattctgataAGATTGTATCA
CGTTGTCAatcagtaaaattaaaaagtggtgcaaatggctctgggtacga
gattgatTGGGTGGAATGTTGGGTGACAATAAACTAACCTTTATATCATG
GCTAATGAGCAAATAACTTTCCATTTTTCATGGAGCAGACACACATTTTA
TGTACATAGTTTCAGCGGCgactttcaattttgaaaatatgaatggtaaa
atttcaaaaaatgtagaaagCAATTCTGACACTGCTTGAATAGCGATGAA
ACAAGCCAGGAGACAGAGTAAAAAGAATGAGAATAGGTGCGTTGACTAGA
ATCCTAGCATTTAATGTtggtgaaaaatcaaaaaagggtTTTCTCCCAAG
GACCCATTTGTTTAATGTTGAGTCTACTTGACTACAGCCAGCAGGGGCTG
CGGGGGCAAAAGTTTCATGATTTTTATTACTAAGAGTTAAGTACCAGAAT
TGTGGAAAGCTCCTGTGAAATGTGGAAAGTTATACTAATAGACGGTGCTG
AAGACAATCCATTCGAAGAACAATACCAACCGAGACTGTTCTTATGACTT
AGGACTAACGGTATCAAAAGATGTAGTACACAGATGGGATTGAACACAAC
AAATAAATTTCACAATATTTAACAGAAACATTTAAAAGTTTTACACCTTA
GAATTCATGAAATATTATATTACAGGGATAATGCTTACAATTTGAACAAA
TTTATGTACGGTTGATGCTCCctaatttgattttcatgggaaacttcatc
gaataagggagcgtttCGAATAGCAGAGCGTCGTTTAAGAGGCTTTCTCG
TTGATGttgctttcaatattatcgaatagtCAGTAGAACgacgaattaga
gagcgtcaactgtatttgaggttgaaaatatatatttcattttatttaat
CTTTTCATCTGTTCTTGCGTTTCGCATCAAAATGATCATCTTTAACATGC
TTGAAAATCTGTTCCAAGTTTTGATCTCCTATCTTCTAATCCTTGCCGTC
CCCGTCCTTTTGATCTTCTGTCCTCGTATCCTTGTCATCTCCCTCGGTAA
ATAAGCTTTGAAGCAATTGCACTTCTTGTTGAACATTTACATTGGTaaca
gcaccattgattctCACTATACCATAGAAAGTCTCAATTTCCATATCCAG
GAAACAATCACCCAAAGTACACAAGCAGTTTTCTGGttgaacatttttga
ttttcggaTTGATATAAATCATATCCCATTTGTTTTGAGAACATATCAAC
GCGCATTCAATCAAAGTATCTGTTCTATGTTTCCGTAATAGTGCATCaat
acatttgatatttttgtcgACTTTTC Run BLAST on NCBI protein sequence of TCONS_00058149-protein >TCONS_00058149-protein ID=TCONS_00058149-protein|Name=TCONS_00058149-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
CSYHKILNMCSCFRFFQKAASGCMLLSIGALLFCGSIEYWWSTKSSDVGL
WKTCSDFVVSSRLCLRRGDLLEFKSKELKVAGMKLEIGGRKLDIVFVSLL
VAVVTAIIHLILLVRSMCQRHPSKSIILVGTVFLSFGVAASIFGTIWALV
MISKDNLGWAFYVLYGADGMLLLGLMCSIITLCSRTPGVYITTSRDDEVA
MLKR Run BLAST on NCBI transcript from alignment at scaffold_307:36072..40144- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058149 ID=TCONS_00058149|Name=TCONS_00058149|organism=Clytia hemisphaerica|type=transcript|length=4073bp|location=Sequence derived from alignment at scaffold_307:36072..40144- (Clytia hemisphaerica)
TGTAGCTATCATAAAATCTTAAATATGTGTTCGTGTTTTCGCTTTTTCCA
AAAAGCTGCCAGTGGTTGCATGCTGTTGAGTATTGGAGCTTTATTGTTTT
GTGGATCCATTGAATATTGGTGGTCTACAAAGTCCAGTGATGTTGGTAAG
ATAAAGAAAGAACACTCCTGTCTCAGTTCTCTGGTGAAACATTTTTCTGG
CAGTAGAGATTAAAATTTCAAATTCAAATTAGGATAGAAATTCTAAACTC
GAAAAAACCCAGTGTCGGATAGCTTTGATGTGCTATATTTTTTGCATTAA
ATTTCGAATTGGGGATGAATAAATTTCCCAATAGTGGGCTAAATTAGAAG
GTATTTTTCCCAGTAGGGACGAAATTTTTGCAGAATGTTACAGGTGAGGG
GGTATCATGGGATGTGCCTCAATGGCACGCCTAATAACGCAACCACACCA
AATTATGACGTTATAATGAAGTTTTTGTAGTTTCTCGCAAAAGTGAGCGA
AAAAACAATTAGGTTACACCCCAGGTTAGAAACTACATTATATTAGTTCA
GCCATTTGTTAGTTCAATTTCTATCGGCTAATGCAATCTGAAAATTATGG
TAATTTTCGGACATGTCATAAGTTACCCTTATAAACTAATGCCCAAACTT
TTTCATAGGTTTGTGGAAAACATGCAGTGATTTCGTGGTCTCGTCACGAT
TGTGTCTTCGAAGAGGTGATCTGTTGGAGTTCAAAAGCAAAGAACTCAAA
GTTGCTGGAATGAAACTCGAGATAGGTGGAAGAAGTATGTCCGAAAAATT
TACAGTGTGTCCGAAAAAACGAAATATGAAAATAAAACTCTCCGTTTGGT
TTGAGCATAAGATTGGAAAAGTTTTGAAAGTTAAAGAGTATAACACTGGG
GTCAATAAGGGATGATTTTAGGATATTTCATTTCAATCGTGTTTCACTTT
TTCTGGACACACTGTATATATAAATCCTTTGCTCTAATTATTTTATTGTG
ACCCAGCTTATCCACTTGGCGACTGACTCGTAACAGCTATACATACAAAA
AACACAAGCTTTTACCTCTAAATAGAAAATGGTCCAATATTTTTGGCAGC
GCTAGTTTAAACTGAGTGGATTAAAAGGCTTTGAAATTAGTTGACTTAGA
TAAAATGGGCGAATACAGATCCACTCCCTAAATATATCGAAAAACTATAA
CCAACTTTGATAAACAAGCTATGGGCTCTTCCAGAAAAAGTCCGTTCATG
GGGGGTGGAGGATGAATTGTCCAGGGGTATTGAAAAAATACCCAGGGGTA
TTGTCCAGGGGGTAAATTTTAATGTCCAGGGATAATTTTTTATGTCCACG
GGGTTGATTTGATGTTTGTCCAGGGGTATAACCCGTGTCCAGGGGGTCAA
AAATCAAAATGTCCAGGGGTAAATCATGAAAAAAATAATATATCCTCCAC
CCCCCATGAACGGATTTTTTCTGGAAGTACAACTTTTAATATCACTCTTC
TCTAATAGAATTGGATATTGTGTTTGTTTCATTATTGGTTGCCGTGGTGA
CGGCTATCATTCACCTCATATTGTTGGTGAGGTCAATGTGTCAAAGACAT
CCATCGAAATCAATCATCCTTGTTGGAACTGTTTTTTTATCCTTTGGAGG
TTCGTGAAATTTATTAAAGTCTAAATTTTTGAAAGAATGCCTTTTAGACC
AACAAACCAAAAAGTTCTCAAACACAAAAAACTCTCAATAACTTCAGCAA
AAATTAAAACTAAGGAAGTACTCTGCCAGGCGGGCTTAAGTACTCTTTTC
TTAAAAACATTATTTCAAAGGGATGAATGGCTAGAGGATGATTTTTTTCC
TTTTAGTATTCTAGTATTAGTAGTGAGCCCGTTGCCCCTGGTTTACTAAG
TCTAGTATTCTTTTAGATTCTAAACCCCAGGGTTTTCCATTACACATTTG
AAAGCTAATGTATACTTTTTTATAAAGATTCCACTATACATATAAAATAT
TGCGCCATTATTCAATATGTTTGTATTAAGGGGAAAATCTTTCACGACTT
TCGCGATTTTTGCGAAGTTTCTGCCAAGTAAGAAATATACACGAGAAATT
CGCAAAAGTTCTTTTTCGCGAAAAGTAGTACACTTTTTTTTGCTATTTTA
TACCCAGTTTTCAGCAAAATGAAACAACATTCTAAAAATCGCGAAAGCTA
TATCTACTGAATTCGCTCCAAAAGTAAAATTCAAGAAAGTTAAATTTCGC
GATTTTGCAACCTCGTGAAAGTTTCTGCCCGCGAAGGTTTCCGCTCTTAA
GATAATACATTTTTCCTGACAAAATCATATATCATAAAATAGAATCGTCC
GAAGTTTATTCCCAATTCTAGTCCTATCACTACAACCATGAAGATTTTCC
TTTTTTCAGTTGCTGCATCAATTTTCGGTACAATTTGGGCGTTAGTGATG
ATCTCTAAAGACAACTTAGGATGGGCGTTTTATGTTTTGTATGGGGCGGA
TGGAATGCTTCTGTTAGGTTTAATGTGTTCAATCATTACATTATGTTCGC
GTACACCTGGTGTTTACATCACAACAAGCCGAGATGATGAGGTTGCTATG
CTGAAACGTTGATCGAGCTAATTGCAACAAGAGCCACACATTTGTTGATT
ACTTTGTCTTCCCACTTTGCGAGGGACACACATTGGATTAACAAGCTCGA
ACCCAGTCCTTTGTTTGCTTTTTGATGATTCTGATAAGATTGTATCACGT
TGTCAATCAGTAAAATTAAAAAGTGGTGCAAATGGCTCTGGGTACGAGAT
TGATTGGGTGGAATGTTGGGTGACAATAAACTAACCTTTATATCATGGCT
AATGAGCAAATAACTTTCCATTTTTCATGGAGCAGACACACATTTTATGT
ACATAGTTTCAGCGGCGACTTTCAATTTTGAAAATATGAATGGTAAAATT
TCAAAAAATGTAGAAAGCAATTCTGACACTGCTTGAATAGCGATGAAACA
AGCCAGGAGACAGAGTAAAAAGAATGAGAATAGGTGCGTTGACTAGAATC
CTAGCATTTAATGTTGGTGAAAAATCAAAAAAGGGTTTTCTCCCAAGGAC
CCATTTGTTTAATGTTGAGTCTACTTGACTACAGCCAGCAGGGGCTGCGG
GGGCAAAAGTTTCATGATTTTTATTACTAAGAGTTAAGTACCAGAATTGT
GGAAAGCTCCTGTGAAATGTGGAAAGTTATACTAATAGACGGTGCTGAAG
ACAATCCATTCGAAGAACAATACCAACCGAGACTGTTCTTATGACTTAGG
ACTAACGGTATCAAAAGATGTAGTACACAGATGGGATTGAACACAACAAA
TAAATTTCACAATATTTAACAGAAACATTTAAAAGTTTTACACCTTAGAA
TTCATGAAATATTATATTACAGGGATAATGCTTACAATTTGAACAAATTT
ATGTACGGTTGATGCTCCCTAATTTGATTTTCATGGGAAACTTCATCGAA
TAAGGGAGCGTTTCGAATAGCAGAGCGTCGTTTAAGAGGCTTTCTCGTTG
ATGTTGCTTTCAATATTATCGAATAGTCAGTAGAACGACGAATTAGAGAG
CGTCAACTGTATTTGAGGTTGAAAATATATATTTCATTTTATTTAATCTT
TTCATCTGTTCTTGCGTTTCGCATCAAAATGATCATCTTTAACATGCTTG
AAAATCTGTTCCAAGTTTTGATCTCCTATCTTCTAATCCTTGCCGTCCCC
GTCCTTTTGATCTTCTGTCCTCGTATCCTTGTCATCTCCCTCGGTAAATA
AGCTTTGAAGCAATTGCACTTCTTGTTGAACATTTACATTGGTAACAGCA
CCATTGATTCTCACTATACCATAGAAAGTCTCAATTTCCATATCCAGGAA
ACAATCACCCAAAGTACACAAGCAGTTTTCTGGTTGAACATTTTTGATTT
TCGGATTGATATAAATCATATCCCATTTGTTTTGAGAACATATCAACGCG
CATTCAATCAAAGTATCTGTTCTATGTTTCCGTAATAGTGCATCAATACA
TTTGATATTTTTGTCGACTTTTC Coding sequence (CDS) from alignment at scaffold_307:36072..40144- >TCONS_00058149 ID=TCONS_00058149|Name=TCONS_00058149|organism=Clytia hemisphaerica|type=CDS|length=2460bp|location=Sequence derived from alignment at scaffold_307:36072..40144- (Clytia hemisphaerica)
TTGCTGCATCAATTTTCGGTACAATTTGGGCGTTAGTGATGATCTCTAAA
GACAACTTAGGATGGGCGTTTTATGTTTTGTATGGGGCGGATGGAATGCT
TCTGTTAGGTTTAATGTGTTCAATCATTACATTATGTTCGCGTACACCTG
GTGTTTACATCACAACAAGCCGAGATGATGAGGTTGCTATGCTGAAACGT
TGAAATTGGATATTGTGTTTGTTTCATTATTGGTTGCCGTGGTGACGGCT
ATCATTCACCTCATATTGTTGGTGAGGTCAATGTGTCAAAGACATCCATC
GAAATCAATCATCCTTGTTGGAACTGTTTTTTTATCCTTTGGAGGTTTGT
GGAAAACATGCAGTGATTTCGTGGTCTCGTCACGATTGTGTCTTCGAAGA
GGTGATCTGTTGGAGTTCAAAAGCAAAGAACTCAAAGTTGCTGGAATGAA
ACTCGAGATAGGTGGAAGAATGTAGCTATCATAAAATCTTAAATATGTGT
TCGTGTTTTCGCTTTTTCCAAAAAGCTGCCAGTGGTTGCATGCTGTTGAG
TATTGGAGCTTTATTGTTTTGTGGATCCATTGAATATTGGTGGTCTACAA
AGTCCAGTGATGTTGTTGCTGCATCAATTTTCGGTACAATTTGGGCGTTA
GTGATGATCTCTAAAGACAACTTAGGATGGGCGTTTTATGTTTTGTATGG
GGCGGATGGAATGCTTCTGTTAGGTTTAATGTGTTCAATCATTACATTAT
GTTCGCGTACACCTGGTGTTTACATCACAACAAGCCGAGATGATGAGGTT
GCTATGCTGAAACGTTGAAATTGGATATTGTGTTTGTTTCATTATTGGTT
GCCGTGGTGACGGCTATCATTCACCTCATATTGTTGGTGAGGTCAATGTG
TCAAAGACATCCATCGAAATCAATCATCCTTGTTGGAACTGTTTTTTTAT
CCTTTGGAGGTTTGTGGAAAACATGCAGTGATTTCGTGGTCTCGTCACGA
TTGTGTCTTCGAAGAGGTGATCTGTTGGAGTTCAAAAGCAAAGAACTCAA
AGTTGCTGGAATGAAACTCGAGATAGGTGGAAGAATGTAGCTATCATAAA
ATCTTAAATATGTGTTCGTGTTTTCGCTTTTTCCAAAAAGCTGCCAGTGG
TTGCATGCTGTTGAGTATTGGAGCTTTATTGTTTTGTGGATCCATTGAAT
ATTGGTGGTCTACAAAGTCCAGTGATGTTGTTGCTGCATCAATTTTCGGT
ACAATTTGGGCGTTAGTGATGATCTCTAAAGACAACTTAGGATGGGCGTT
TTATGTTTTGTATGGGGCGGATGGAATGCTTCTGTTAGGTTTAATGTGTT
CAATCATTACATTATGTTCGCGTACACCTGGTGTTTACATCACAACAAGC
CGAGATGATGAGGTTGCTATGCTGAAACGTTGAAATTGGATATTGTGTTT
GTTTCATTATTGGTTGCCGTGGTGACGGCTATCATTCACCTCATATTGTT
GGTGAGGTCAATGTGTCAAAGACATCCATCGAAATCAATCATCCTTGTTG
GAACTGTTTTTTTATCCTTTGGAGGTTTGTGGAAAACATGCAGTGATTTC
GTGGTCTCGTCACGATTGTGTCTTCGAAGAGGTGATCTGTTGGAGTTCAA
AAGCAAAGAACTCAAAGTTGCTGGAATGAAACTCGAGATAGGTGGAAGAA
TGTAGCTATCATAAAATCTTAAATATGTGTTCGTGTTTTCGCTTTTTCCA
AAAAGCTGCCAGTGGTTGCATGCTGTTGAGTATTGGAGCTTTATTGTTTT
GTGGATCCATTGAATATTGGTGGTCTACAAAGTCCAGTGATGTTGTTGCT
GCATCAATTTTCGGTACAATTTGGGCGTTAGTGATGATCTCTAAAGACAA
CTTAGGATGGGCGTTTTATGTTTTGTATGGGGCGGATGGAATGCTTCTGT
TAGGTTTAATGTGTTCAATCATTACATTATGTTCGCGTACACCTGGTGTT
TACATCACAACAAGCCGAGATGATGAGGTTGCTATGCTGAAACGTTGAAA
TTGGATATTGTGTTTGTTTCATTATTGGTTGCCGTGGTGACGGCTATCAT
TCACCTCATATTGTTGGTGAGGTCAATGTGTCAAAGACATCCATCGAAAT
CAATCATCCTTGTTGGAACTGTTTTTTTATCCTTTGGAGGTTTGTGGAAA
ACATGCAGTGATTTCGTGGTCTCGTCACGATTGTGTCTTCGAAGAGGTGA
TCTGTTGGAGTTCAAAAGCAAAGAACTCAAAGTTGCTGGAATGAAACTCG
AGATAGGTGGAAGAATGTAGCTATCATAAAATCTTAAATATGTGTTCGTG
TTTTCGCTTTTTCCAAAAAGCTGCCAGTGGTTGCATGCTGTTGAGTATTG
GAGCTTTATTGTTTTGTGGATCCATTGAATATTGGTGGTCTACAAAGTCC
AGTGATGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00058149-exon-scaffold_307-1575043694:40000..40144 | TCONS_00058149-exon-scaffold_307-1575043694:40000..40144 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1575043694:39361..39486 | TCONS_00058149-exon-scaffold_307-1575043694:39361..39486 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1575043694:38496..38636 | TCONS_00058149-exon-scaffold_307-1575043694:38496..38636 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1575043694:36072..37735 | TCONS_00058149-exon-scaffold_307-1575043694:36072..37735 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1510915933:40000..40144 | TCONS_00058149-exon-scaffold_307-1510915933:40000..40144 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1510915933:39361..39486 | TCONS_00058149-exon-scaffold_307-1510915933:39361..39486 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1510915933:38496..38636 | TCONS_00058149-exon-scaffold_307-1510915933:38496..38636 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1510915933:36072..37735 | TCONS_00058149-exon-scaffold_307-1510915933:36072..37735 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1491911889:40000..40144 | TCONS_00058149-exon-scaffold_307-1491911889:40000..40144 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1491911889:39361..39486 | TCONS_00058149-exon-scaffold_307-1491911889:39361..39486 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1491911889:38496..38636 | TCONS_00058149-exon-scaffold_307-1491911889:38496..38636 | Clytia hemisphaerica | exon |
| TCONS_00058149-exon-scaffold_307-1491911889:36072..37735 | TCONS_00058149-exon-scaffold_307-1491911889:36072..37735 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_307 | supercontig | scaffold_307:36072..40144 - |
Blast
The following BLAST results are available for this feature:
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