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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058154 ID=TCONS_00058154|Name=TCONS_00058154|organism=Clytia hemisphaerica|type=transcript|length=1324bp
TTTAAGAAAGAAATACTTTACACATGAACTTTAGCATATCCTTCTCAAAT
CGAATCGCTCTTAATATAGTAGCCAAAAGTTAAGTtaattttagttaaaa
tacacGTGTTcagatgctcttaacttttagagttttaagcctaaaaatgt
tcttaacatgttcttatatttCAGCCATTGAAATCTCATCTTATGATATA
TTTTGCTCTTATAAACGTGCATCACTTTTAGAACAAAGCTTCAAGGTACA
TTGAATCGGAAGTTTTGAGatttgatgGTAAGTGACATTGTATTTGTGGT
GATCTTTCTCTTCGTCCCATCTTTACCACAAGCGTACTACCTTGTCTCAT
TTTCGTGGTTTGCACTGTTACTTATAAATTGGAGTTTCATAAATTGTTGG
AATCGTTGGGAAGGAATAAGAATCATAAAAGAATGGGGCACAGATGACAA
CGGTAATCCAAAATGTACCAAGCGGTATAGACACTCGATGAAAGAAATCA
AGGAAATTCTGGATGAAAATTTACCAAAGGAGCCGAAAGTGATTGTTCAA
TGCGAAGCTGTGGAACCTCGAACTTCGTGCTGCAGAAAACAACGCGTTAG
TTGGAGCAATCAGAAAGAGTTTGAATTTCAACATTGGATCGATGTGACTG
AACAACATTTGGTGAAATCACAAATTGAAGAAGCGATTTTTGgtgaattg
aaaattgatttcgaATTTGATGACGAAGAAACGAAGGAATCATATGAACA
ACACGTTCAGAATCTTGTAAAAGAAGCAAAGCAACATTCTCCACACGCTC
AAGTCAACGTCAAGCAACTTTTCCAAGTCGGTGAAAAAGATATCAAAACC
TACAGACGGTCGTTTTATGGCAAGAAGGCTCTTTTTGGAAGACCATGGGT
GTGTCTTCAATGCGTTTTTCCTCAGATCGAACTTTcgttcaaaatattga
aatggtttctcgaaaaaattggcttcaaaagtttattgaccaaagaaatt
gtaatcaGAAAAGTAATATCTGACAGAAATATTGTATCTGTATAGCATTT
GTGATCAATAATTTTATACCATTTTGAATAGTATAACATGGCGAAGACCT
GTTCCACGGGACGTTACGGTCTTTGTGTCTTAAACATTAAGCTATTCAAC
TTACAGTAAACCAATCAATCTGCTATACAGACCTGTTaggaaaaatttat
ttacacTATAGCTCTTAAAACATCCATCCACGAAagttagaatttagaaa
atatacAAACTCTTTCAAAATCAGCCTCTTGAAAACACTTTTCATAAAAG
CCAGTAAGTTCGGTTGAAGCTGCG Run BLAST on NCBI transcript from alignment at scaffold_307:84736..86488- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058154 ID=TCONS_00058154|Name=TCONS_00058154|organism=Clytia hemisphaerica|type=transcript|length=1753bp|location=Sequence derived from alignment at scaffold_307:84736..86488- (Clytia hemisphaerica)
TTTAAGAAAGAAATACTTTACACATGAACTTTAGCATATCCTTCTCAAAT
CGAATCGCTCTTAATATAGTAGCCAAAAGTTAAGTTAATTTTAGTTAAAA
TACACGTGTTCAGATGCTCTTAACTTTTAGAGTTTTAAGCCTAAAAATGT
TCTTAACATGTTCTTATATTTCAGCCATTGAAATCTCATCTTATGATATA
TTTTGCTCTTATAAACGTGCATCACTTTTAGAACAAAGCTTCAAGGTACA
TTGAATCGGAAGTTTTGAGGTAAAGACATTATCCGGATATAGTTACATTA
TCAGTATGTACTATCTGTTCAATAATAGTGAACATAAATAGTCAATTCCA
GAAGAAATCAGCACTTTTTGATACATTTTTCTTTTTCAAAGCAACGGCAA
TACACCCTTGTCTCCCGGCCCAGGTGGAACTTCTTCCCACAATGGGGATG
AAAATTGTCTAACGAAATCCGCATGGGAATAGTAATTCTATTGTTCTCAT
GTCAAAAAATCGAATGGGGATGGGTTTGGAGTGGAATTTTTCTACATTGA
ATATCTGATGGAAATTAAAATAACAAGTCAAGTTACCATATATTAGGGCT
GAAATTGTTGGGTATTTTCCCACCAGGAGAAAGTTTAGCCAAACATTCCA
TCTGGTCTATTACGCGGAGGTCTAACAATATTCATTTCAAATTTTCAGAT
TTGATGGTAAGTGACATTGTATTTGTGGTGATCTTTCTCTTCGTCCCATC
TTTACCACAAGCGTACTACCTTGTCTCATTTTCGTGGTTTGCACTGTTAC
TTATAAATTGGAGTTTCATAAATTGTTGGAATCGTTGGGAAGGAATAAGA
ATCATAAAAGAATGGGGCACAGATGACAACGGTAATCCAAAATGTACCAA
GCGGTATAGACACTCGATGAAAGAAATCAAGGAAATTCTGGATGAAAATT
TACCAAAGGAGCCGAAAGTGATTGTTCAATGCGAAGCTGTGGAACCTCGA
ACTTCGTGCTGCAGAAAACAACGCGTTAGTTGGAGCAATCAGAAAGAGTT
TGAATTTCAACATTGGATCGATGTGACTGAACAACATTTGGTGAAATCAC
AAATTGAAGAAGCGATTTTTGGTGAATTGAAAATTGATTTCGAATTTGAT
GACGAAGAAACGAAGGAATCATATGAACAACACGTTCAGAATCTTGTAAA
AGAAGCAAAGCAACATTCTCCACACGCTCAAGTCAACGTCAAGCAACTTT
TCCAAGTCGGTGAAAAAGATATCAAAACCTACAGACGGTCGTTTTATGGC
AAGAAGGCTCTTTTTGGAAGACCATGGGTGTGTCTTCAATGCGTTTTTCC
TCAGATCGAACTTTCGTTCAAAATATTGAAATGGTTTCTCGAAAAAATTG
GCTTCAAAAGTTTATTGACCAAAGAAATTGTAATCAGAAAAGTAATATCT
GACAGAAATATTGTATCTGTATAGCATTTGTGATCAATAATTTTATACCA
TTTTGAATAGTATAACATGGCGAAGACCTGTTCCACGGGACGTTACGGTC
TTTGTGTCTTAAACATTAAGCTATTCAACTTACAGTAAACCAATCAATCT
GCTATACAGACCTGTTAGGAAAAATTTATTTACACTATAGCTCTTAAAAC
ATCCATCCACGAAAGTTAGAATTTAGAAAATATACAAACTCTTTCAAAAT
CAGCCTCTTGAAAACACTTTTCATAAAAGCCAGTAAGTTCGGTTGAAGCT
GCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058154-exon-scaffold_307-1575043694:86220..86488 | TCONS_00058154-exon-scaffold_307-1575043694:86220..86488 | Clytia hemisphaerica | exon |
| TCONS_00058154-exon-scaffold_307-1575043694:84736..85790 | TCONS_00058154-exon-scaffold_307-1575043694:84736..85790 | Clytia hemisphaerica | exon |
| TCONS_00058154-exon-scaffold_307-1510915933:86220..86488 | TCONS_00058154-exon-scaffold_307-1510915933:86220..86488 | Clytia hemisphaerica | exon |
| TCONS_00058154-exon-scaffold_307-1510915933:84736..85790 | TCONS_00058154-exon-scaffold_307-1510915933:84736..85790 | Clytia hemisphaerica | exon |
| TCONS_00058154-exon-scaffold_307-1491911889:86220..86488 | TCONS_00058154-exon-scaffold_307-1491911889:86220..86488 | Clytia hemisphaerica | exon |
| TCONS_00058154-exon-scaffold_307-1491911889:84736..85790 | TCONS_00058154-exon-scaffold_307-1491911889:84736..85790 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_307 | supercontig | scaffold_307:84736..86488 - |
Blast
The following BLAST results are available for this feature:
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