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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058163 ID=TCONS_00058163|Name=TCONS_00058163|organism=Clytia hemisphaerica|type=transcript|length=409bp
GTTCAGTGTTTTTTGTATTTCGAGTGTTATGCTTGCAATATTGTAATCAT
TAATTCGCGTGTTTACAAACGACTTATTGCTGAGAGTTGTTCGCGAGGAA
ATTTGAGACGAGATTTGCTGTGACCATGTATTAGCGTGTTTAAAGGGCCA
TGACGCATTCGTTTTGAGGGGAATTCTTTATTTGGTCGATTTCCGTGGAA
AGGAGTTTACTACCAAAGATTTCAAGAGAGAGCAGGGGGTTGGTTGCTTT
GTAGGTTCTATGATGGATAGCCAACAAAAAGAAGATGTTCCCTTGGTGTC
CGGAAAACATTACGTTCATCCGTCCGAAAATAAAATCTCCAAAAAGTTAT
CATTGGTAAGAAAGAATTTTTCATCTTCCTATCTCTGCTTGCAAATTATA
TCTCAATCA Run BLAST on NCBI transcript from alignment at scaffold_307:184734..185779- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058163 ID=TCONS_00058163|Name=TCONS_00058163|organism=Clytia hemisphaerica|type=transcript|length=1046bp|location=Sequence derived from alignment at scaffold_307:184734..185779- (Clytia hemisphaerica)
GTTCAGTGTTTTTTGTATTTCGAGTGTTATGCTTGCAATATTGTAATCAT
TAATTCGCGTGTTTACAAACGACTTATTGCTGAGAGTTGTTCGCGAGGAA
ATTTGAGACGAGATTTGCTGTGACCATGTATTAGCGTGTTTAAAGGGCCA
TGACGCATTCGTTTTGAGGGGAATTCTTTATTTGGTCGATTTCCGTGGAA
AGGAGTTTACTACCAAAGATTTCAAGAGAGAGCAGGGGGTTGGTTGCTTT
GTAGGTTCTATGATGGATAGCCAAGTAAGTTTTATTTTGTAAATTTCGAT
AATTAAAGATAATTAAATTTGCTAAACTAAACTGGCTTTGAACGAGCTTA
TTGCTGGATGTAATCTTGCATTTTTGACGACTGGGAAGGTTATTTTATCT
CTGTCTTACATCTTTACAGTGCAGGTCAAGATCGCGGAAGCCCCAAAACC
TCCAAGCCGTTTCCCGTCACTTGAAATTGAAAATACATAAATAAGCTAAG
ACCCTATATTAGACCCTTAGATTGTCTATAGTTTTTACTGTATTGTATTT
TAAACAATGAATATTTAGGTCAATCGACATCAGATACTCCGCATATGATC
ATGAATGAAACTCCTTTCCTCTGGCATTCTCTTTTCTTAATTGTAATCAA
GCTGGTCTGATCTTTTTGTCACCTTTATATCAAAAGCAATTAATTTCAAA
GAAGGGTTTAAGATTAGAAGGACTTTGCACATAAGAATTTAACGCATTAA
TCTTCACGTTTGATCGAGATTAAGAATTAAAAATAGAATGGCCTCATTAA
TCAATTTCTTCCTCTGAACAGCAATCTGAAAATGAAAATGTTTATTTGGG
AAAGTTTGGGTTCACAAATAACTCAGCGATAAAGGCGATCATTTTGTATC
CTTTATTTCAGCAAAAAGAAGATGTTCCCTTGGTGTCCGGAAAACATTAC
GTTCATCCGTCCGAAAATAAAATCTCCAAAAAGTTATCATTGGTAAGAAA
GAATTTTTCATCTTCCTATCTCTGCTTGCAAATTATATCTCAATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058163-exon-scaffold_307-1575043694:185506..185779 | TCONS_00058163-exon-scaffold_307-1575043694:185506..185779 | Clytia hemisphaerica | exon |
| TCONS_00058163-exon-scaffold_307-1575043694:184734..184868 | TCONS_00058163-exon-scaffold_307-1575043694:184734..184868 | Clytia hemisphaerica | exon |
| TCONS_00058163-exon-scaffold_307-1510915933:185506..185779 | TCONS_00058163-exon-scaffold_307-1510915933:185506..185779 | Clytia hemisphaerica | exon |
| TCONS_00058163-exon-scaffold_307-1510915933:184734..184868 | TCONS_00058163-exon-scaffold_307-1510915933:184734..184868 | Clytia hemisphaerica | exon |
| TCONS_00058163-exon-scaffold_307-1491911889:185506..185779 | TCONS_00058163-exon-scaffold_307-1491911889:185506..185779 | Clytia hemisphaerica | exon |
| TCONS_00058163-exon-scaffold_307-1491911889:184734..184868 | TCONS_00058163-exon-scaffold_307-1491911889:184734..184868 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_307 | supercontig | scaffold_307:184734..185779 - |
Blast
The following BLAST results are available for this feature:
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