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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005731 ID=TCONS_00005731|Name=TCONS_00005731|organism=Clytia hemisphaerica|type=transcript|length=1442bp
CAGTTTTATCTGAATGAGATGTTTGAAAAGTTTAAGTGATGTTACATTAT
TGTGTTAATATCACGGAGTGGGTTATCGATTGGATTCGGAGATCGGTTAT
GGATTGCACTAGCGCCACCCCTTGAttcttttctttaatttctgaCACCA
AGTGGTATCGAGTAtcattacacccccttctcacagacccactgggaccc
ctccCCGCTAGAAATTGGccgaaatatcgtccccagtgggaaattagact
ctaatttttgtccatggtgaaaataatcaaataaacaaatcctcactgta
AACTTTGTGCTATTTTCCTCCatctccactgaattttctgacttgaaaag
tATGGGATAAGAATTCCAGCCATAATGCATAAAATGTCAGTATCAACCCT
CATCAAGTTTTTGTCCGTTATTTCTACCCCCCCCCACATCTGGCTGAAAA
tattctaccgggtctgtgagaagggggtgtatcatttTTCTACTAAGTAT
AAAGTCTGCTATGACCTGGTCAGGGGTTCAGCTAATACTCTTGATCACCG
TAGCCGAGTGCTTTACCGTTGCACTCCGCAAGGGTGACCGAACGTTGGCC
CATAAGAAATAAGACAGATTTTCTCCCCTATTAAATAGTTTAAAGCTCCC
CTGATTATAGAAATATTATTTAATCCCAAATATAATTTTCTAACTCTTTT
TTACAGTTCATTCATTGTTCGGACTAGTAAGATTTTAGTTGATAACTGAG
ACATGTAGCCTAGTCTAGACTATCCCCGGGTGTGTCTCATTCCACTGTAT
TGACCTGAGTGACAACTTGCAGTCATATATCAACTAGTTTGTTCATATAG
CACAGATCAATTAGAGACAATTAGGATATAATAGAAGATATAATATGTCT
TAATTGCAGACACTCGACCGCACAAATAACTATTCTACGGATATTTTGAA
CTAAGATGTAGCTATAAGGAACTATGCAGCTTTTTGCAGTACGTTCTTTA
TGCTTTAGCTTTTATTCATAAAGAATCTGATCTCCGAGAAAGACTATGAT
AGTAGTGAAAGATGTCGCGGAACTTACTTGGAAATTGGCGTAAGGAATAT
TAGAAAacatagtttttttttcttcttctttcttagatAATTTGTATGCA
AAGCCGTTTCTTTTTGCTAGGTTTTTATATGACAAATTTCTCTAACGAAA
ATGAGCGATAAATAGAAAAAGATGTTTGGTAATGGAATGAATCCGATCTC
TTTTTCCAGTAAAACTCCGGGGGGTTACTAAGTTTGTGAGGTGACGGGTA
TACCAAATTACCAAATTTTATGACTCTTTGACAGGGTTGACTTTTGATAT
TTCGTTTAATATCATATATTCACATCCTTGAAAGTCTCTCATaaagggta
caaaaaccattaaaaagcaaagaGTCTCTTAAAGGGTCCTTA Run BLAST on NCBI transcript from alignment at sc0000059:313731..315172+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005731 ID=TCONS_00005731|Name=TCONS_00005731|organism=Clytia hemisphaerica|type=transcript|length=1442bp|location=Sequence derived from alignment at sc0000059:313731..315172+ (Clytia hemisphaerica)
CAGTTTTATCTGAATGAGATGTTTGAAAAGTTTAAGTGATGTTACATTAT
TGTGTTAATATCACGGAGTGGGTTATCGATTGGATTCGGAGATCGGTTAT
GGATTGCACTAGCGCCACCCCTTGAttcttttctttaatttctgaCACCA
AGTGGTATCGAGTAtcattacacccccttctcacagacccactgggaccc
ctccCCGCTAGAAATTGGccgaaatatcgtccccagtgggaaattagact
ctaatttttgtccatggtgaaaataatcaaataaacaaatcctcactgta
AACTTTGTGCTATTTTCCTCCatctccactgaattttctgacttgaaaag
tATGGGATAAGAATTCCAGCCATAATGCATAAAATGTCAGTATCAACCCT
CATCAAGTTTTTGTCCGTTATTTCTACCCCCCCCCACATCTGGCTGAAAA
tattctaccgggtctgtgagaagggggtgtatcatttTTCTACTAAGTAT
AAAGTCTGCTATGACCTGGTCAGGGGTTCAGCTAATACTCTTGATCACCG
TAGCCGAGTGCTTTACCGTTGCACTCCGCAAGGGTGACCGAACGTTGGCC
CATAAGAAATAAGACAGATTTTCTCCCCTATTAAATAGTTTAAAGCTCCC
CTGATTATAGAAATATTATTTAATCCCAAATATAATTTTCTAACTCTTTT
TTACAGTTCATTCATTGTTCGGACTAGTAAGATTTTAGTTGATAACTGAG
ACATGTAGCCTAGTCTAGACTATCCCCGGGTGTGTCTCATTCCACTGTAT
TGACCTGAGTGACAACTTGCAGTCATATATCAACTAGTTTGTTCATATAG
CACAGATCAATTAGAGACAATTAGGATATAATAGAAGATATAATATGTCT
TAATTGCAGACACTCGACCGCACAAATAACTATTCTACGGATATTTTGAA
CTAAGATGTAGCTATAAGGAACTATGCAGCTTTTTGCAGTACGTTCTTTA
TGCTTTAGCTTTTATTCATAAAGAATCTGATCTCCGAGAAAGACTATGAT
AGTAGTGAAAGATGTCGCGGAACTTACTTGGAAATTGGCGTAAGGAATAT
TAGAAAacatagtttttttttcttcttctttcttagatAATTTGTATGCA
AAGCCGTTTCTTTTTGCTAGGTTTTTATATGACAAATTTCTCTAACGAAA
ATGAGCGATAAATAGAAAAAGATGTTTGGTAATGGAATGAATCCGATCTC
TTTTTCCAGTAAAACTCCGGGGGGTTACTAAGTTTGTGAGGTGACGGGTA
TACCAAATTACCAAATTTTATGACTCTTTGACAGGGTTGACTTTTGATAT
TTCGTTTAATATCATATATTCACATCCTTGAAAGTCTCTCATaaagggta
caaaaaccattaaaaagcaaagaGTCTCTTAAAGGGTCCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005731-exon-sc0000059-1491911889:313731..315172 | TCONS_00005731-exon-sc0000059-1491911889:313731..315172 | Clytia hemisphaerica | exon |
| TCONS_00005731-exon-sc0000059-1510915933:313731..315172 | TCONS_00005731-exon-sc0000059-1510915933:313731..315172 | Clytia hemisphaerica | exon |
| TCONS_00005731-exon-sc0000059-1575043694:313731..315172 | TCONS_00005731-exon-sc0000059-1575043694:313731..315172 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059 | supercontig | sc0000059:313731..315172 + |
Blast
The following BLAST results are available for this feature:
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