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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058283 ID=TCONS_00058283|Name=TCONS_00058283|organism=Clytia hemisphaerica|type=transcript|length=1315bp
CAGagctatttaaatcaaaactcaatgaatcagaaagtaaaatatttctc
aaaaaccaATGTAAGATCAAAACGAGAAAAAGGAATTCCTTTCGTAGTAG
AGTAGTTGAAAGTGAAATGAATGGAAATCGTATTTAGCTTTCCTGGGACC
TAAAATCTGGGCTACCCTTCCCGataactttaaaaaacttaaaagccTAG
ATGAATTTAAATAAGAAATCAAGCAATGGGGGCCCACTACTTGTCCTTGC
CGAAACTGTCGTACTTTTATCCATGGCGTTGGTTTCattgattgaattta
aattaatttgtaaataatagTTGATCTTGAGTATCAACCTTTTAGATAGA
TTTGTAATTAaaagttgatattgattagcctcgagctaagtacacattgt
actactttgcatcaactttaaagaaaagaaacataaacgtAGGGCTGACT
TAagttggccgataaggtaaatgatttaaaatattataagattatgtatt
ttgatgaccagCAAACAATTCTCAACGGTAATGTTAATAACGTGTGTTTA
CCGTTAAGCACATTTCCAACACTGTATAAATTATCTGAAATAGCAAAAAA
CGATTAACGTTTACATCCGTATCCGTTTACATTTCTCATCCGTATGATTC
CTCTCTAATTTTCACCATTTCATTtacaacaaagaaaattttcgttATTA
AGAATCTTAGATTTCTTCGAGCTTCCATACCCCTTGTCCTTTGTATCTAA
ATCCTTTCCCAGTTGACTGACAACGTTATGGAGGTCATATTGATGTcctt
tttgatgttcttcttttTGGGGACCAATGATTCGATAATCTCTTAGCATT
AAAACAAATTCATACCCAGTCCCTGAGCTCGTTTCGTGATGAATCTGATA
GCTCTCACAAAAGTTATTTTGTCAGGTCAATCAGATTGTTATTAGACCTA
CTACTaacccagacggcacacaacgtcaaagcaacgtccatgtgacatta
ataacgtccaaataaagttatttgaacgttaaaacaacgttgtgtccCAG
CTGGGAAGTCATTTCATGAATTGCTGTTAACAGCATTGAATATTTCACCA
GTTCACAGCTTCTCCTTAAAGCTAAAATGCTTCTTCAGTTAATAATCTCT
TTCAAAGGAACTTTTCACCATTTTCGTAAGATAAACGTAATCGAATTACA
ACAATTAGAGCGTAAAGAACAATTCCAAGAAGAATAGAAAACGCTCCAAA
GAATCGAGTCACGTCTGATGCTGCTCGTGCTTTGTCTGGGTTCCGATAAC
GAAACTTTCGTGTCT Run BLAST on NCBI transcript from alignment at scaffold_309:365282..366655- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058283 ID=TCONS_00058283|Name=TCONS_00058283|organism=Clytia hemisphaerica|type=transcript|length=1374bp|location=Sequence derived from alignment at scaffold_309:365282..366655- (Clytia hemisphaerica)
CAGAGCTATTTAAATCAAAACTCAATGAATCAGAAAGTAAAATATTTCTC
AAAAACCAATGTAAGATCAAAACGAGAAAAAGGAATTCCTTTCGTAGTAG
AGTAGTTGAAAGTGAAATGAATGGAAATCGTATTTAGCTTTCCTGGGACC
TAAAATCTGGGCTACCCTTCCCGATAACTTTAAAAAACTTAAAAGCCTAG
ATGAATTTAAATAAGAAATCAAGCAATGGGGGCCCACTACTTGTCCTTGC
CGAAACTGTCGTACTTTTATCCATGGCGTTGGTTTCATTGATTGAATTTA
AATTAATTTGTAAATAATAGTTGATCTTGAGTATCAACCTTTTAGATAGA
TTTGTAATTAAAAGTTGATATTGATTAGCCTCGAGCTAAGTACACATTGT
ACTACTTTGCATCAACTTTAAAGAAAAGAAACATAAACGTAGGGCTGACT
TAAGTTGGCCGATAAGGTAAATGATTTAAAATATTATAAGATTATGTATT
TTGATGACCAGCAAACAATTCTCAACGGTAATGTTAATAACGTGTGTTTA
CCGTTAAGCACATTTCCAACACTGTATAAATTATCTGAAATAGCAAAAAA
CGATTAACGTTTACATCCGTATCCGTTTACATTTCTCATCCGTATGATTC
CTCTCTAATTTTCACCATTTCATTTACAACAAAGAAAATTTTCGTTATTA
AGAATCTTAGATTTCTTCGAGCTTCCATACCCCTTGTCCTTTGTATCTAA
ATCCTTTCCCAGTTGACTGACAACGTTATGGAGGTCATATTGATGTCCTT
TTTGATGTTCTTCTTTTTGGGGACCAATGATTCGATAATCTCTTAGCATT
AAAACAAATTCATACCCAGTCCCTGAGCTCGTTTCGTGATGAATCTGATA
GCTCTCACAAAAGTTATTTTGTCAGGTCGNCCTGAGCTCGTTTTGTGATG
AATCTGATAGCTCTCACAAAAATTATTTTGTCAGGTCAATCAGATTGTTA
TTAGACCTACTACTAACCCAGACGGCACACAACGTCAAAGCAACGTCCAT
GTGACATTAATAACGTCCAAATAAAGTTATTTGAACGTTAAAACAACGTT
GTGTCCCAGCTGGGAAGTCATTTCATGAATTGCTGTTAACAGCATTGAAT
ATTTCACCAGTTCACAGCTTCTCCTTAAAGCTAAAATGCTTCTTCAGTTA
ATAATCTCTTTCAAAGGAACTTTTCACCATTTTCGTAAGATAAACGTAAT
CGAATTACAACAATTAGAGCGTAAAGAACAATTCCAAGAAGAATAGAAAA
CGCTCCAAAGAATCGAGTCACGTCTGATGCTGCTCGTGCTTTGTCTGGGT
TCCGATAACGAAACTTTCGTGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058283-exon-scaffold_309-1575043694:365731..366655 | TCONS_00058283-exon-scaffold_309-1575043694:365731..366655 | Clytia hemisphaerica | exon |
| TCONS_00058283-exon-scaffold_309-1575043694:365282..365671 | TCONS_00058283-exon-scaffold_309-1575043694:365282..365671 | Clytia hemisphaerica | exon |
| TCONS_00058283-exon-scaffold_309-1510915933:365731..366655 | TCONS_00058283-exon-scaffold_309-1510915933:365731..366655 | Clytia hemisphaerica | exon |
| TCONS_00058283-exon-scaffold_309-1510915933:365282..365671 | TCONS_00058283-exon-scaffold_309-1510915933:365282..365671 | Clytia hemisphaerica | exon |
| TCONS_00058283-exon-scaffold_309-1491911889:365731..366655 | TCONS_00058283-exon-scaffold_309-1491911889:365731..366655 | Clytia hemisphaerica | exon |
| TCONS_00058283-exon-scaffold_309-1491911889:365282..365671 | TCONS_00058283-exon-scaffold_309-1491911889:365282..365671 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_309 | supercontig | scaffold_309:365282..366655 - |
Blast
The following BLAST results are available for this feature:
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