TCONS_00058310 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058310
Unique NameTCONS_00058310
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1317

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058310 ID=TCONS_00058310|Name=TCONS_00058310|organism=Clytia hemisphaerica|type=transcript|length=1317bp
agtgcgttgcgcacgttcgattatttttattatttagagGTTACATTTTA
TCTTGTCTTATTCTAATATTGCTGAGAATTACAATAGTAGAGGCGGAGGA
GAAAATTTTAGATAACTCAGTAAACTCAATAAATTGCTTTTGacttaaca
atattttttgtcttttcaacgaTCCCGCCTATTATTGGTTTTTCTAATGA
TAGATTTGTTCTCGAATTTCGTTGGCAGGGATTACTCGAGTGAACATCAA
GAAAGTTTTGACCAACAGTTGGTGTTGATACGGTACCGATATTTGACGTT
GCAATTGTTGCGTGTGTGTCTGAACCAACGGAAAGACGAACAAGAAGAAA
CACTCTCTACAATCAACACACAACTCAAAGAATACGGTGATTTTATCGAA
ACTCTCAACGACAAGTGCTTCCCTACCAAATGGGAGTGTATTCATCGACC
AAAGTCAACAGATTTACACCACATCATCCGTCAACAAAAACATCCAGTCA
TCGTGCAAAACCTCACGCAACTTGTTGTTCGTGCTGCTTCCCTCAAAACA
GGTAGTGACGAAAGTGAGAGTGAATTCTTTTCAAAGACTTTCGAATCAGT
TTCAAGCCAAATCAAAGAAATCCATGAAAACCTTTCCAAAGAGTTGGTGA
TTGAAAATGAGAATGTATTCAACGGAAAATCCTTACCTCAAATCGTGTTT
TTTATGGAGATCTGCAGTGTGGTTGCAGTCTTGACAGGAAGCGTTAAAGA
AACGTTGCAGCAGCACGAGTCTGGCGTCAAGACGAGAAAGCGAAATAAAg
caaaccaaaataaaaagGAGGACAAGATAGGAGATGCGGTGATCACTTTC
GCAAAGGAGATGTCTACACTTCTCAAACAATTCGGTGAACGTTTACTTGA
CATCAAAAAGAACAACATTGATAAAACGCTGAACGATAAAGCGATGGTAG
ACCTTTTCGAAAAGACGAGTTCAACAGTCGTGACCAAGATATGGGACAAA
GTTCAAAGCAGTTACGAACAATCTATCCTCGAGCTTAATCAAATTATCGA
ATTCAAAACgaaattttttcaatcattAGCTTAAATTCATTTTCCAATTT
AGCTGTATTTTTGTTATTACTATAGatttaattgaaataatttacaacct
ttttacaacattttcttttatatttttatgcGATTGAACTAAAGGAAAGC
GAATACTAACTTGGAAATAAATTTCGCATTATCAATAATTCTGTTTCCAT
GGTTCCCTTGAAAAACAACAGTCCGTTCTCCGCGCATACCGTCGGTCGTT
TTGCTTTGCTGCCCTGG
Run BLAST on NCBI

protein sequence of TCONS_00058310-protein

>TCONS_00058310-protein ID=TCONS_00058310-protein|Name=TCONS_00058310-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
MIDLFSNFVGRDYSSEHQESFDQQLVLIRYRYLTLQLLRVCLNQRKDEQE
ETLSTINTQLKEYGDFIETLNDKCFPTKWECIHRPKSTDLHHIIRQQKHP
VIVQNLTQLVVRAASLKTGSDESESEFFSKTFESVSSQIKEIHENLSKEL
VIENENVFNGKSLPQIVFFMEICSVVAVLTGSVKETLQQHESGVKTRKRN
KANQNKKEDKIGDAVITFAKEMSTLLKQFGERLLDIKKNNIDKTLNDKAM
VDLFEKTSSTVVTKIWDKVQSSYEQSILELNQIIEFKTKFFQSLA
Run BLAST on NCBI

transcript from alignment at scaffold_309:724667..733581-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058310 ID=TCONS_00058310|Name=TCONS_00058310|organism=Clytia hemisphaerica|type=transcript|length=8915bp|location=Sequence derived from alignment at scaffold_309:724667..733581- (Clytia hemisphaerica)
AGTGCGTTGCGCACGTTCGATTATTTTTATTATTTAGAGGTTACATTTTA
TCTTGTCTTATTCTAATATTGCTGAGAATTACAATAGTAGAGGCGGAGGA
GAAAATTTTAGATAACTCAGTAAACTCAATAAATTGCTTTTGACTTAACA
ATATTTTTTGTCTTTTCAACGATCCCGCCTATTATTGGTTTTTCTAATGA
TAGATTTGTTCTCGAATTTCGTTGGCAGGGATTACTCGAGTGAACATCAA
GAAAGTTTTGACCAACAGGTTTGTTATTCCATCAATGTTCCAATGAAAAG
GGCTTCGTATTTTCACACACGTCAGAATCTTATATTATCTTTCGTCAAAA
ACGTCATAGAAAATCTTTAATCAAATATTTCTCTTCTTAAAAATCCTACC
TCAATTAAATCAAGGACAAGTGTCCTTGATTAAATATATAATCTTTAGTC
AAATGTTTCCAGTATAAAAAATCTTTTGTCAAATATTCTTCAAGCATGAA
AATTTTTCGACAAATTCAAGCTTAAAATCTTTCTGCGAATAATTTTCATG
CATAGAAAAACTTTCGTCAAATAAATTTCAAGCATAGAAAAACTTTCGTC
AAATAAATTTCAAGCATAGAAAAACTTTCGTCAAATAAATTCCAAGAATA
AAAAACTTTCGTCAAATAAATTTCAAGCATAGAAAATTTTCGTCAAATAA
ATTTCAAGCATAGAGAAACTTTCGTCAAATAATAAATTCCAAACAAATAA
ATTCCAAGAATAAAAAACTTTCGTCAAATAAATTTCACGCATAGAAAAAC
GTTTGTCAAATAAATTTCAAGCTTAGAGAAACTTTCGTCAAATAAATTCC
AAGAATAAAAAGCTTTCGTCAAATTAATTTCAAGAATAAAAAACATTCGT
CAAATAAATTTCAAGAATAAAAACTTTCGTCAAATAAATCTCAAGAATAT
AAAACATTCGTCAAATAAATTTCAAGCATAGAAAAACTTTCGTCAAATAA
ATCTCAAGAATAAAAACATTCGTCAAATAAATTTCAAGCATAAAAAAACT
TTCGTCAAATAAATTCCAAGAATAAAAAACTTTCGTCAAATAAATTTCAA
GCATAGAAAAACTTTCGTCAAATTAATTTCGTCAAATAAATTTCAAGCAT
AGAAAAACTTTCGTCAAATAAATTCCAAGAATAAAAACTTTCGTCAAATA
AATTTCAGAAAAATTTCGTCAAATAAATTTCAAGCATAGAAAAAATTTCG
TCAAATAAATTTCAAGCATAGAGAAACTTTCGTCAAATAAATTGAAAAAC
GTTCGTCAAATAAATTTTAATCAAATTTTCATATAGAACATATTTTGTCA
AAATATTCTTCCAGCATGAATATTTCGCCAAATATATTTCAAGTATACAA
ATCTTTCGTCAAATACTTGAAATAACTATTTTTCGTCATGAAAAATCTTA
CGTCGATTACTTGTGGCGCACTCGATATAATATGTCCATATTTATTTTTC
ATGAAAATGTTCGTCATCCAAAACGATACTATTCCCGGGCGCTCTTGTTA
AAAACGTGATCAAAAGGTCATATTCATTCAAAGCAACTAATAGGTGTTTG
TTTGCAAACTTTGCCCATGCTACACTTTTCTATATGACTCAGCTGCCTGA
CTATCATCAGTTCAAATGGTAGAGTGCTAAACTATAAAATCAGTAACATA
TTTTAGTCTGGGACGAATTTACAATCGATTAGGTTGCACGTTTTTTTATA
AGAATAAACTATATAAGAACATAAGGCTTCGCTGGCCAAAATGTTAAGAA
CAAGTTAAGAACATTCTTAAGGCTTTGTGAACTCAACACCCTATTTCTTA
GGAAAAAAGTGAAAAATATTCATAAAATGGTCGAAATAAGAACATATTAA
TTAAGAACATTTTCAGGCTTAAAACTCAAAAAGTTAAGAACATCCGAAGG
CTTAAAAAACTTTGGATGTTCTTATATAAAAAACGTTTAGTTAGATAATT
GAAAGGATTCTGAGATTTGGTTGAGATTTCCTTGCATTTGGCAAAAGTTT
TAATGGTAAAGAAACTGTCGCTACAGGCAAAATTGTAAGGTCATAAAGTG
GGTGGTGTTCAAAACCCATTTCCGCAGAAATATCATAAGATTTTTGGCAA
TCCCCTTAGCTCGAAATGATTTACATCAAATTTCATTTATGTCTCACCGA
CTAACCTCTAAAATTTCTATACAAATGATCAGCAGAAAAATCTTGTTTTT
ATCACATCTTGAAGGTGATCTTTTTTCGAACATATATTTTCCAAAAAAAT
CAAACCATGATAATTTATTCAATGTTTGAGTTGAAATCTAACGGATCTCG
ACTTTTTTATCGTCAATAATTTTTGGAATAAATCTTTTAGTCTAAGTTGG
ACCTTATTCCAAAATTTATTTTAATAATATTTTGATAATTATTACACGTC
ACTCAATACAAAAATGATTGAGTTCATTGACCTTGAACTGTACTCTTATA
CCCTTAGGTGCCAAATAAAAGGGGGTTCGAATAAACGGGGGGGGTTGGAA
ATTGTACCTCTGAAAACCCAAAAAATAAGGTAAATATAAAATCAACTAAA
ATCAGGCTTTTTGGAGCAAAATAAAGGGACTTCTTTTTGCCAACTGAAAA
TATTCTTGTAAAAATTAATAAACGGGTCGGGGGCGGAGCTGGAAATTTTT
CGAAAAATCAACAAGCGGGGGGAGGGGCGTTTATTTGGCACCTAAGAGTA
ACTTTTCTGAAAGAGAATCAATTTTCTCTTATTGATAGTTGGTGTTGATA
CGGTACCGATATTTGACGTTGCAATTGTTGCGTGTGTGTCTGAACCAACG
GAAAGACGAACAAGAAGAAACACTCTCTACAATCAACACACAACTCAAAG
AATACGGTGATTTTATCGAAACTCTCAACGACAAGTGCTTCCCTACCAAA
TGGGTATTGGAATCTTTTGATTTGATTTGATAAAAGATGTTTCATGCAAA
ATAGACCTTTTCATAAATTACGTCACGAACATCATCACTTGCCTCGTATT
CAAACAATTGCCATGGTGATTATGTCGCTTGAGACATTAAATGATTTTTC
TATGAATAGAAAGTAGTTTTAATAAAATCTGCTGGGAATTAATCACCATG
GCAATTATTTCAAGTCGAGGCAAGTGATGTTCGTGACGTAATTTATGAAA
AGGTCTACGCGGAAAACTTTTTAGAAGGCCTTATATTTTTATTTCATCAC
TGAAAGAACTTTGTTCAACGATTATATGAAGTAACCTTTCAATACCATAG
GCGGTTTTAGACCCTGTCGAACATATCTGATGAAGAGATTTGTAATTGTA
ATTCCGGTTCTTTTAACGAGCGTTGCACTTCTTCGCATGTTTCCGACGTA
AATGCTCTATTTTCTTAAATCCGCCGGTGAATACACTTATCAATTATTGG
TCTATAGAGAATTGTCAATAAATTGCTTGCGTATTTTTGAACTTGTTCAA
AAAGCAAATTTTCTGTTAGCAGATTTGTGTGAAAAAAGTCACGAAAAAAG
TCGAGTAAAGTTCTGATTGTCTAAAAATGCTTACATATTTTATAAACATA
TTTTTATCAAAACGAGTTGATCTTTGTATTTCTCAGCCAATCAGAGCTTT
TACTCGATGTTTATTCGTGACTTTGTTACATGAATCTGCTAGTAAGGAAA
CCTTGCATTTCTTCATACAGGAGTGTATTCATCGACCAAAGTCAACAGAT
TTACACCACATCATCCGTCAACAAAAACATCCAGTCATCGTGCAAAACCT
CACGCAACTTGTTGTTCGTGCTGCTTCCCTCAAAACAGGTTTCTACATGG
GAGTTTCTAAACATCGACCAGAAATGGTGACCACGACCGGCGACCACTCC
CAGCGACCAGATAAATATGGATTATCGAGTTTATCTGTTCTCTTGTGGTT
CTGTCATGGTTCTGTCTGGTTGATGTTTAGAAACTCCCTTTCTACATATT
GTTCATTCTCTTTTCTGTTTGACATATTTTTTCCTATAATTACCAGGTGT
GTTACAATTACCCTCTCTTAAGTGAAATTCTTCGAGTTCTTTGAAGTTTA
GTAAATTTTTACGGCTCTGAGCAATTTTAGAATGTCATAATTTTACACTT
ATAATCTTAAATAGACAAAATTTGATAGATTGCCAATCAAAATGTGAATT
TGATAGATTGCCAATCAAAATGTGACTTGATTATCAATGTTTTCGATGAA
TAAAGTTTACAGTTTTTAAGATCTATAAAACCGGGGATCTCTCTTGTTTA
AAGTAATTTTTGACGGTTTTCTTAGGTTAGGATTTAAATTCAACCTAAAT
TTGTAATAGTAATTGTATGAAATTGAGGGAAATTGGGGATGAAACTCGAG
GTATTACTCCTCGAGTTTCATTCTGATATAGTTTGAAACAGTGCGAATAA
AAGTGAACGCTATTTCAAACTGTTTCAAAATGGTACGAGGGTATTAATCC
TAATTTCACGAAATGATGTATCATTCCTGGTTAATTCTTTATGACTGATT
TCATTATTTTTGAAAGCGTTTATCCAAAATATAATCTAAGAGAGTTTCAC
CAAACTTATCATGCAATTTTTTTGTATAAATGATTTATCCGAAATGTAGA
TTAAAATCTAATTTTATCCTGACTGCATAATTGACTTGTGTAAGGGTCTA
TCTGAAACGGATAGGCATATTCGAAACGGAGGTCTATCTGAAACAGATAG
GTCTATCCGAAACGGATTGGTCTATCCGAAATGGATAATAATTCCGGTGA
GATTTTATGAAAGGGAAATTGTCAACGAAAAAAACGTGATTTATTTTGCA
GGTAGTGACGAAAGTGAGAGTGAATTCTTTTCAAAGACTTTCGAATCAGT
TTCAAGCCAAATCAAAGGTGAGGTGCATGCTATGGCATAGAATGGTAAAC
AAATAAAACTTCTGATTTTCTTTTCAATGTTTAACATTAATATAGGGATC
TTTTTCAGATATCTTTTACTTTGTGTAGTATTGATCAAGCGAATTTGAGC
CTCTTTGGAGGTAATGGTAGTAAAGTGATTGTTTGAGCTTAAGTTAAGTC
GTTCTATGAGATCGTGCTACCATACCCTAGTTGACTAAGCCCGTATTCAC
AAGGACACATGGCTTATGGCAATATAGTGATTTCGGCGCTTTAAAGATGT
TTTATATTTACAGATTTTAAGTTTGCCTCGGAATACTTAAAGTTATTCAG
TCACAACTTACCATCAGATTTATGCTAGTGACTGAATCAAACTAGCTTAG
ATTTCTACTATATAGATTTACGTTTTTTAAATATTTCCAGCTATTTTCTT
TTTCAGACGTAGTAGAGATCTTTCTAATTTTCATCAAACTCTTTACTTTC
TTTGCATTTTCTTTACAGAAATCCATGAAAACCTTTCCAAAGAGTTGGTG
ATTGAAAATGAGAATGTATTCAACGGAAAATCCTTACCTCAAATCGTGTT
TTTTATGGAGGTAAGTTCTAATCCACTGATCTCTAACTATTCTACTGGAT
CGGGCCCAATGAAGTATAGGATTTGAAGCCAACAAATCCTACCAAAGTTG
CGCGGCCTTGAGCGGCTCGCCTGGTTTTTACACAAATGACAGATTGAAAC
TAAAATTTACCGCTAGATTTCGAAAAATATATCAATCGTAAACAGAGGAA
TTGCTAGATTCAATCTGTCGTCAAAAATGAGGCGCTTTTTTTATAAAAAA
GGCTTCACTTTTATTACCTGAGAAAGGTTAGAGATTGAACTCTAGCCCTT
CGGGCTTTAAACTCATGATCGGGCCACCCATATAAAAAGCTAACGTGTCC
AGATAGACCTTTTCATAAATTACGTGACGAACATCACTCGCCTCGTATTG
AAACAATCACCATGGTGATTATGTCTCTTGAGACATTAAATGATTTTTTT
ATGAATAGGAAGTAGTTTTAATAAAATCCACTGGGAGCTAATCACCATGG
CAATAATTTCAAAACGAAGCAAGTGATATTCATAACGTAATTTATGAAAA
GGTCTATTTAGAGCTGACTCGAATGGTTGTTTGACATTTGAACGTTCGAG
AATCTAAGGTAAAAAAGTCAGTCGACTTCAAAACTGGACACACTTTCCAA
GTCAATTTTTTATAAACAGTTATAACCTATTAGTGTGTAAAAATATGATA
TCTTTGAAGCCAACGAAATGATCTTCAGTACAGTCTTTTAAGTTCTGTTG
TCTTATTTTCTTCTAAGCCAGGCTCGAAAATTGCATGCTGATTTTTTGGT
CTTAAAGACAAAGTAATGAGACATGGTCTCGATTCTATTTTGATATTTTG
TGATACGGAGACTTTCCTCTATCTTTTCTCATATGAAACGTGTTTCATAA
TTCATTTGTCTTCAATAAAATAAGATCATCTATTAGCTCTTCTTTAGACG
GCCGACGGCACAAAGGTGGCTGTTAAAATTTATGTTTGGAAAAGATTGAA
AGAAGTCATTGCATTGACATCAAAAGGGCGTTGCATTCACTTCAGTCAGC
CCACTTTATGTCAACTTTAATTCATAATTAGAATATTATTCGTTAACAAT
CCAATGAACTGGATATTTTCCAGATCTGCAGTGTGGTTGCAGTCTTGACA
GGAAGCGTTAAAGAAACGTTGCAGCAGCACGAGTCTGGCGTCAAGACGAG
AAAGCGAAATAAAGCAAACCAAAATAAAAAGGTTAGTACTCTTCAAGATT
TTCGGTTTCTAGGGAGAAGGGGGTTACGTTGCAATTTTGCGGAAGAATCA
CCCCAATAGCATTTTATAATGACCCCCCCTCCCCCATTTTATGAAATTTT
TCCTGAAAAAGTACTACCTTTATTTTCCTAGGTTTTTTAGGAAAATCGCT
TTATTTTCCTAGTTTTTTTAGGAAAATCACCCCTAAATCACTTACTATTG
CCCCCATTTTAAATATTTTCTCCCAGAGTACCAACCCCCTGCTTATTAGA
CCCCCTATAATTAAGTACAAAAAAGTACTTGAAAATATATGTGGCCTGAA
ACGTCACTTCTACCCTGACTTTTGAGCCTTGTGAGAATCTTTTAGGGCCA
TAGTGTCATGTGTGGTTGGTTGACCCGCTTGCAGAATCGAAAAATCTTAG
TTGACCCCTTCTTATTTTTGAAATTTTTGATTTGATTCCAAAAATCCCTA
TACTGTTTAAGTTGATCGTAGTAGTAGCTTTCATCTTTTAAAGCTTTGGA
CTAAAAGAAAGGATGTGATCATTCTAACGACAGTCATCGCAAAGATGATA
TTGCCAAAGTTTCAACTTTCAGGGTGGAAATCAAAAAAAAATTCAATTTT
TCGTCTACTTTTAGTCATTTTAGCGACTTTTCTGAGTGAAAATGGGGAAA
TTTTTAGATTTTCTTTCTGACAGGTTCCCAAATTTACCAGATATTCATAT
CTACCAGGGTCCATTTTTCAAACTCCAGCGGCACGTCCCCGTGGTTGCAA
GTACAAGTAAGTACCTAACCTAACTATTTCCGTTATTTATTGTTTCAGGA
GGACAAGATAGGAGATGCGGTGATCACTTTCGCAAAGGAGATGTCTACAC
TTCTCAAACAATTCGGTGAACGTTTACTTGACATCAAAAAGAACAACATT
GATAAAACGCTGAACGATAAAGCGATGGTAGACCTTTTCGAAAAGGTAAC
TTATTTCTGTTTCCTTTTTTAATCGTGTGTAGGTTTTACCACTGACTCTA
AACCTATTTGGATCCGAAGGCTTGGGGACACGAGAAGTTTTTTTCGCGTT
GGTGCAATACAACATGCTCAATCCCACTAACCTGAAACGCTTTCTTGTGT
CTCCACCCCATTTTTCTTTCTACCAATAAAAGTGAAATCTGACATATGTC
CCAGGGACAAAATCAGCGCTCAGGCAAATTAAGGCCTGTCCAGATTTTTC
AAACTTAGAAACCAAAGTTGCACACCATTAAAAGGATCATTTAAAAAAAA
AAATTATTTGAAATTTTGCTGACGTCGGCACTTCATTGCAAAATTTCGTA
TTTTGCTGATTTCTGCTGACGTCAGCAAAATTTGCAAAAAAAATTATGCA
AAAATGTTACTATTATTGATATGCAACTTTTGTACAAATTTCATGTTTAT
ACCATAAGCCAAACTGGAGTTATTCAAAAAACAAGTTTTGCTGACGTCAG
CATTTTTTGGTTTTTGTCTAATATCTTTTTTTGGGTGAAAAAATTAATTA
TGGCACAGCTATTTCAGTGATCTACACTCCAATAGGCTTTTTTCGATGTA
AGTGATATGACAAGTGGAAACGGTGATAAAAAATTAAGTTAAGTTTGGAA
GTGCCTTAATTTGCCTGAGCGTGTCTTTTGGGTATTTCCCTCACTTTTTG
TCCCATGAAACAAGAAAGAAACAAGAAACTTTTTTCTTGTGTTGGTGGGT
TGGACCATGTTGCATTGCACCAACGCGAAAAAAACTTCTCGTGTCCCCAA
GCTTTTAAGTGCGTTTGTTTGTTTCTACTGAAGCTGTAATTAAGGATACT
TTCACCTTTCAGACGAGTTCAACAGTCGTGACCAAGATATGGGACAAAGT
TCAAAGCAGTTACGAACAATCTATCCTCGAGCTTAATCAAATTATCGAAT
TCAAAACGAAATTTTTTCAATCATTAGCTTAAATTCATTTTCCAATTTAG
CTGTATTTTTGTTATTACTATAGATTTAATTGAAATAATTTACAACCTTT
TTACAACATTTTCTTTTATATTTTTATGCGATTGAACTAAAGGAAAGCGA
ATACTAACTTGGAAATAAATTTCGCATTATCAATAATTCTGTTTCCATGG
TTCCCTTGAAAAACAACAGTCCGTTCTCCGCGCATACCGTCGGTCGTTTT
GCTTTGCTGCCCTGG

Coding sequence (CDS) from alignment at scaffold_309:724667..733581-

>TCONS_00058310 ID=TCONS_00058310|Name=TCONS_00058310|organism=Clytia hemisphaerica|type=CDS|length=7104bp|location=Sequence derived from alignment at scaffold_309:724667..733581- (Clytia hemisphaerica)
ACGAGTTCAACAGTCGTGACCAAGATATGGGACAAAGTTCAAAGCAGTTA
CGAACAATCTATCCTCGAGCTTAATCAAATTATCGAATTCAAAACGAAAT
TTTTTCAATCATTAGCTTAAGAGGACAAGATAGGAGATGCGGTGATCACT
TTCGCAAAGGAGATGTCTACACTTCTCAAACAATTCGGTGAACGTTTACT
TGACATCAAAAAGAACAACATTGATAAAACGCTGAACGATAAAGCGATGG
TAGACCTTTTCGAAAAGATCTGCAGTGTGGTTGCAGTCTTGACAGGAAGC
GTTAAAGAAACGTTGCAGCAGCACGAGTCTGGCGTCAAGACGAGAAAGCG
AAATAAAGCAAACCAAAATAAAAAGAAATCCATGAAAACCTTTCCAAAGA
GTTGGTGATTGAAAATGAGAATGTATTCAACGGAAAATCCTTACCTCAAA
TCGTGTTTTTTATGGAGGTAGTGACGAAAGTGAGAGTGAATTCTTTTCAA
AGACTTTCGAATCAGTTTCAAGCCAAATCAAAGGAGTGTATTCATCGACC
AAAGTCAACAGATTTACACCACATCATCCGTCAACAAAAACATCCAGTCA
TCGTGCAAAACCTCACGCAACTTGTTGTTCGTGCTGCTTCCCTCAAAACA
GTTGGTGTTGATACGGTACCGATATTTGACGTTGCAATTGTTGCGTGTGT
GTCTGAACCAACGGAAAGACGAACAAGAAGAAACACTCTCTACAATCAAC
ACACAACTCAAAGAATACGGTGATTTTATCGAAACTCTCAACGACAAGTG
CTTCCCTACCAAATGGATGATAGATTTGTTCTCGAATTTCGTTGGCAGGG
ATTACTCGAGTGAACATCAAGAAAGTTTTGACCAACAGACGAGTTCAACA
GTCGTGACCAAGATATGGGACAAAGTTCAAAGCAGTTACGAACAATCTAT
CCTCGAGCTTAATCAAATTATCGAATTCAAAACGAAATTTTTTCAATCAT
TAGCTTAAGAGGACAAGATAGGAGATGCGGTGATCACTTTCGCAAAGGAG
ATGTCTACACTTCTCAAACAATTCGGTGAACGTTTACTTGACATCAAAAA
GAACAACATTGATAAAACGCTGAACGATAAAGCGATGGTAGACCTTTTCG
AAAAGATCTGCAGTGTGGTTGCAGTCTTGACAGGAAGCGTTAAAGAAACG
TTGCAGCAGCACGAGTCTGGCGTCAAGACGAGAAAGCGAAATAAAGCAAA
CCAAAATAAAAAGAAATCCATGAAAACCTTTCCAAAGAGTTGGTGATTGA
AAATGAGAATGTATTCAACGGAAAATCCTTACCTCAAATCGTGTTTTTTA
TGGAGGTAGTGACGAAAGTGAGAGTGAATTCTTTTCAAAGACTTTCGAAT
CAGTTTCAAGCCAAATCAAAGGAGTGTATTCATCGACCAAAGTCAACAGA
TTTACACCACATCATCCGTCAACAAAAACATCCAGTCATCGTGCAAAACC
TCACGCAACTTGTTGTTCGTGCTGCTTCCCTCAAAACAGTTGGTGTTGAT
ACGGTACCGATATTTGACGTTGCAATTGTTGCGTGTGTGTCTGAACCAAC
GGAAAGACGAACAAGAAGAAACACTCTCTACAATCAACACACAACTCAAA
GAATACGGTGATTTTATCGAAACTCTCAACGACAAGTGCTTCCCTACCAA
ATGGATGATAGATTTGTTCTCGAATTTCGTTGGCAGGGATTACTCGAGTG
AACATCAAGAAAGTTTTGACCAACAGACGAGTTCAACAGTCGTGACCAAG
ATATGGGACAAAGTTCAAAGCAGTTACGAACAATCTATCCTCGAGCTTAA
TCAAATTATCGAATTCAAAACGAAATTTTTTCAATCATTAGCTTAAGAGG
ACAAGATAGGAGATGCGGTGATCACTTTCGCAAAGGAGATGTCTACACTT
CTCAAACAATTCGGTGAACGTTTACTTGACATCAAAAAGAACAACATTGA
TAAAACGCTGAACGATAAAGCGATGGTAGACCTTTTCGAAAAGATCTGCA
GTGTGGTTGCAGTCTTGACAGGAAGCGTTAAAGAAACGTTGCAGCAGCAC
GAGTCTGGCGTCAAGACGAGAAAGCGAAATAAAGCAAACCAAAATAAAAA
GAAATCCATGAAAACCTTTCCAAAGAGTTGGTGATTGAAAATGAGAATGT
ATTCAACGGAAAATCCTTACCTCAAATCGTGTTTTTTATGGAGGTAGTGA
CGAAAGTGAGAGTGAATTCTTTTCAAAGACTTTCGAATCAGTTTCAAGCC
AAATCAAAGGAGTGTATTCATCGACCAAAGTCAACAGATTTACACCACAT
CATCCGTCAACAAAAACATCCAGTCATCGTGCAAAACCTCACGCAACTTG
TTGTTCGTGCTGCTTCCCTCAAAACAGTTGGTGTTGATACGGTACCGATA
TTTGACGTTGCAATTGTTGCGTGTGTGTCTGAACCAACGGAAAGACGAAC
AAGAAGAAACACTCTCTACAATCAACACACAACTCAAAGAATACGGTGAT
TTTATCGAAACTCTCAACGACAAGTGCTTCCCTACCAAATGGATGATAGA
TTTGTTCTCGAATTTCGTTGGCAGGGATTACTCGAGTGAACATCAAGAAA
GTTTTGACCAACAGACGAGTTCAACAGTCGTGACCAAGATATGGGACAAA
GTTCAAAGCAGTTACGAACAATCTATCCTCGAGCTTAATCAAATTATCGA
ATTCAAAACGAAATTTTTTCAATCATTAGCTTAAGAGGACAAGATAGGAG
ATGCGGTGATCACTTTCGCAAAGGAGATGTCTACACTTCTCAAACAATTC
GGTGAACGTTTACTTGACATCAAAAAGAACAACATTGATAAAACGCTGAA
CGATAAAGCGATGGTAGACCTTTTCGAAAAGATCTGCAGTGTGGTTGCAG
TCTTGACAGGAAGCGTTAAAGAAACGTTGCAGCAGCACGAGTCTGGCGTC
AAGACGAGAAAGCGAAATAAAGCAAACCAAAATAAAAAGAAATCCATGAA
AACCTTTCCAAAGAGTTGGTGATTGAAAATGAGAATGTATTCAACGGAAA
ATCCTTACCTCAAATCGTGTTTTTTATGGAGGTAGTGACGAAAGTGAGAG
TGAATTCTTTTCAAAGACTTTCGAATCAGTTTCAAGCCAAATCAAAGGAG
TGTATTCATCGACCAAAGTCAACAGATTTACACCACATCATCCGTCAACA
AAAACATCCAGTCATCGTGCAAAACCTCACGCAACTTGTTGTTCGTGCTG
CTTCCCTCAAAACAGTTGGTGTTGATACGGTACCGATATTTGACGTTGCA
ATTGTTGCGTGTGTGTCTGAACCAACGGAAAGACGAACAAGAAGAAACAC
TCTCTACAATCAACACACAACTCAAAGAATACGGTGATTTTATCGAAACT
CTCAACGACAAGTGCTTCCCTACCAAATGGATGATAGATTTGTTCTCGAA
TTTCGTTGGCAGGGATTACTCGAGTGAACATCAAGAAAGTTTTGACCAAC
AGACGAGTTCAACAGTCGTGACCAAGATATGGGACAAAGTTCAAAGCAGT
TACGAACAATCTATCCTCGAGCTTAATCAAATTATCGAATTCAAAACGAA
ATTTTTTCAATCATTAGCTTAAGAGGACAAGATAGGAGATGCGGTGATCA
CTTTCGCAAAGGAGATGTCTACACTTCTCAAACAATTCGGTGAACGTTTA
CTTGACATCAAAAAGAACAACATTGATAAAACGCTGAACGATAAAGCGAT
GGTAGACCTTTTCGAAAAGATCTGCAGTGTGGTTGCAGTCTTGACAGGAA
GCGTTAAAGAAACGTTGCAGCAGCACGAGTCTGGCGTCAAGACGAGAAAG
CGAAATAAAGCAAACCAAAATAAAAAGAAATCCATGAAAACCTTTCCAAA
GAGTTGGTGATTGAAAATGAGAATGTATTCAACGGAAAATCCTTACCTCA
AATCGTGTTTTTTATGGAGGTAGTGACGAAAGTGAGAGTGAATTCTTTTC
AAAGACTTTCGAATCAGTTTCAAGCCAAATCAAAGGAGTGTATTCATCGA
CCAAAGTCAACAGATTTACACCACATCATCCGTCAACAAAAACATCCAGT
CATCGTGCAAAACCTCACGCAACTTGTTGTTCGTGCTGCTTCCCTCAAAA
CAGTTGGTGTTGATACGGTACCGATATTTGACGTTGCAATTGTTGCGTGT
GTGTCTGAACCAACGGAAAGACGAACAAGAAGAAACACTCTCTACAATCA
ACACACAACTCAAAGAATACGGTGATTTTATCGAAACTCTCAACGACAAG
TGCTTCCCTACCAAATGGATGATAGATTTGTTCTCGAATTTCGTTGGCAG
GGATTACTCGAGTGAACATCAAGAAAGTTTTGACCAACAGACGAGTTCAA
CAGTCGTGACCAAGATATGGGACAAAGTTCAAAGCAGTTACGAACAATCT
ATCCTCGAGCTTAATCAAATTATCGAATTCAAAACGAAATTTTTTCAATC
ATTAGCTTAAGAGGACAAGATAGGAGATGCGGTGATCACTTTCGCAAAGG
AGATGTCTACACTTCTCAAACAATTCGGTGAACGTTTACTTGACATCAAA
AAGAACAACATTGATAAAACGCTGAACGATAAAGCGATGGTAGACCTTTT
CGAAAAGATCTGCAGTGTGGTTGCAGTCTTGACAGGAAGCGTTAAAGAAA
CGTTGCAGCAGCACGAGTCTGGCGTCAAGACGAGAAAGCGAAATAAAGCA
AACCAAAATAAAAAGAAATCCATGAAAACCTTTCCAAAGAGTTGGTGATT
GAAAATGAGAATGTATTCAACGGAAAATCCTTACCTCAAATCGTGTTTTT
TATGGAGGTAGTGACGAAAGTGAGAGTGAATTCTTTTCAAAGACTTTCGA
ATCAGTTTCAAGCCAAATCAAAGGAGTGTATTCATCGACCAAAGTCAACA
GATTTACACCACATCATCCGTCAACAAAAACATCCAGTCATCGTGCAAAA
CCTCACGCAACTTGTTGTTCGTGCTGCTTCCCTCAAAACAGTTGGTGTTG
ATACGGTACCGATATTTGACGTTGCAATTGTTGCGTGTGTGTCTGAACCA
ACGGAAAGACGAACAAGAAGAAACACTCTCTACAATCAACACACAACTCA
AAGAATACGGTGATTTTATCGAAACTCTCAACGACAAGTGCTTCCCTACC
AAATGGATGATAGATTTGTTCTCGAATTTCGTTGGCAGGGATTACTCGAG
TGAACATCAAGAAAGTTTTGACCAACAGACGAGTTCAACAGTCGTGACCA
AGATATGGGACAAAGTTCAAAGCAGTTACGAACAATCTATCCTCGAGCTT
AATCAAATTATCGAATTCAAAACGAAATTTTTTCAATCATTAGCTTAAGA
GGACAAGATAGGAGATGCGGTGATCACTTTCGCAAAGGAGATGTCTACAC
TTCTCAAACAATTCGGTGAACGTTTACTTGACATCAAAAAGAACAACATT
GATAAAACGCTGAACGATAAAGCGATGGTAGACCTTTTCGAAAAGATCTG
CAGTGTGGTTGCAGTCTTGACAGGAAGCGTTAAAGAAACGTTGCAGCAGC
ACGAGTCTGGCGTCAAGACGAGAAAGCGAAATAAAGCAAACCAAAATAAA
AAGAAATCCATGAAAACCTTTCCAAAGAGTTGGTGATTGAAAATGAGAAT
GTATTCAACGGAAAATCCTTACCTCAAATCGTGTTTTTTATGGAGGTAGT
GACGAAAGTGAGAGTGAATTCTTTTCAAAGACTTTCGAATCAGTTTCAAG
CCAAATCAAAGGAGTGTATTCATCGACCAAAGTCAACAGATTTACACCAC
ATCATCCGTCAACAAAAACATCCAGTCATCGTGCAAAACCTCACGCAACT
TGTTGTTCGTGCTGCTTCCCTCAAAACAGTTGGTGTTGATACGGTACCGA
TATTTGACGTTGCAATTGTTGCGTGTGTGTCTGAACCAACGGAAAGACGA
ACAAGAAGAAACACTCTCTACAATCAACACACAACTCAAAGAATACGGTG
ATTTTATCGAAACTCTCAACGACAAGTGCTTCCCTACCAAATGGATGATA
GATTTGTTCTCGAATTTCGTTGGCAGGGATTACTCGAGTGAACATCAAGA
AAGTTTTGACCAACAGACGAGTTCAACAGTCGTGACCAAGATATGGGACA
AAGTTCAAAGCAGTTACGAACAATCTATCCTCGAGCTTAATCAAATTATC
GAATTCAAAACGAAATTTTTTCAATCATTAGCTTAAGAGGACAAGATAGG
AGATGCGGTGATCACTTTCGCAAAGGAGATGTCTACACTTCTCAAACAAT
TCGGTGAACGTTTACTTGACATCAAAAAGAACAACATTGATAAAACGCTG
AACGATAAAGCGATGGTAGACCTTTTCGAAAAGATCTGCAGTGTGGTTGC
AGTCTTGACAGGAAGCGTTAAAGAAACGTTGCAGCAGCACGAGTCTGGCG
TCAAGACGAGAAAGCGAAATAAAGCAAACCAAAATAAAAAGAAATCCATG
AAAACCTTTCCAAAGAGTTGGTGATTGAAAATGAGAATGTATTCAACGGA
AAATCCTTACCTCAAATCGTGTTTTTTATGGAGGTAGTGACGAAAGTGAG
AGTGAATTCTTTTCAAAGACTTTCGAATCAGTTTCAAGCCAAATCAAAGG
AGTGTATTCATCGACCAAAGTCAACAGATTTACACCACATCATCCGTCAA
CAAAAACATCCAGTCATCGTGCAAAACCTCACGCAACTTGTTGTTCGTGC
TGCTTCCCTCAAAACAGTTGGTGTTGATACGGTACCGATATTTGACGTTG
CAATTGTTGCGTGTGTGTCTGAACCAACGGAAAGACGAACAAGAAGAAAC
ACTCTCTACAATCAACACACAACTCAAAGAATACGGTGATTTTATCGAAA
CTCTCAACGACAAGTGCTTCCCTACCAAATGGATGATAGATTTGTTCTCG
AATTTCGTTGGCAGGGATTACTCGAGTGAACATCAAGAAAGTTTTGACCA
ACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036727XLOC_036727Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058310-exon-scaffold_309-1575043694:733314..733581TCONS_00058310-exon-scaffold_309-1575043694:733314..733581Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1575043694:730629..730793TCONS_00058310-exon-scaffold_309-1575043694:730629..730793Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1575043694:729744..729861TCONS_00058310-exon-scaffold_309-1575043694:729744..729861Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1575043694:728665..728730TCONS_00058310-exon-scaffold_309-1575043694:728665..728730Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1575043694:728072..728163TCONS_00058310-exon-scaffold_309-1575043694:728072..728163Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1575043694:726851..726958TCONS_00058310-exon-scaffold_309-1575043694:726851..726958Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1575043694:725887..726033TCONS_00058310-exon-scaffold_309-1575043694:725887..726033Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1575043694:724667..725019TCONS_00058310-exon-scaffold_309-1575043694:724667..725019Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1510915933:733314..733581TCONS_00058310-exon-scaffold_309-1510915933:733314..733581Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1510915933:730629..730793TCONS_00058310-exon-scaffold_309-1510915933:730629..730793Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1510915933:729744..729861TCONS_00058310-exon-scaffold_309-1510915933:729744..729861Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1510915933:728665..728730TCONS_00058310-exon-scaffold_309-1510915933:728665..728730Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1510915933:728072..728163TCONS_00058310-exon-scaffold_309-1510915933:728072..728163Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1510915933:726851..726958TCONS_00058310-exon-scaffold_309-1510915933:726851..726958Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1510915933:725887..726033TCONS_00058310-exon-scaffold_309-1510915933:725887..726033Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1510915933:724667..725019TCONS_00058310-exon-scaffold_309-1510915933:724667..725019Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1491911889:733314..733581TCONS_00058310-exon-scaffold_309-1491911889:733314..733581Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1491911889:730629..730793TCONS_00058310-exon-scaffold_309-1491911889:730629..730793Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1491911889:729744..729861TCONS_00058310-exon-scaffold_309-1491911889:729744..729861Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1491911889:728665..728730TCONS_00058310-exon-scaffold_309-1491911889:728665..728730Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1491911889:728072..728163TCONS_00058310-exon-scaffold_309-1491911889:728072..728163Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1491911889:726851..726958TCONS_00058310-exon-scaffold_309-1491911889:726851..726958Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1491911889:725887..726033TCONS_00058310-exon-scaffold_309-1491911889:725887..726033Clytia hemisphaericaexon
TCONS_00058310-exon-scaffold_309-1491911889:724667..725019TCONS_00058310-exon-scaffold_309-1491911889:724667..725019Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058310-proteinTCONS_00058310-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:724667..733581 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.1353	72.284	55.7953	54.1968	62.0068	50.1929	48.0822	50.371	35.2659	30.7482	36.2681	32.2006	40.2906	40.3605	52.4545	58.8868	52.1603	52.2061	24.9495	27.1764	42.3511	40.6352	55.4	53.2705	26.0586	28.2271	49.3056	52.1517	51.5675	51.127
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058310 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top