TCONS_00058313 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058313
Unique NameTCONS_00058313
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1313

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058313 ID=TCONS_00058313|Name=TCONS_00058313|organism=Clytia hemisphaerica|type=transcript|length=1313bp
CACTCATCGTGTTTTACACGTGGATGGAGCCAGATGAAGCAGGAACACTC
AGAGCTTTTTAGAGGGTCATAAAATTGTTGGTCCCAAACTCCAGAAAACA
AAGccctcaaaataaaaaaaaatgttttcaagaaCAGCCAGACAGTTATC
CAAACAAACATGTACCATCAGAAATGCAAGATTCAACTCTTCAAGCACAA
GGAAAACAACACAATTGAAGAACATGTTGCAATCGAATGAATTGGAATTT
TTGATGGAAGCCCACAGTGGTTTATCTGCTAAGATTGTTGAGGAAGCAGG
TTTTAAAGGTATTTGGGGCAGTGGCTTATCTATTTCTGCTTCACTTGGTG
TAAGAGACAGTAACGAGGCCTCATGGACACAAGTATTGGATGTTTGTGAA
TATATGAGCGATGCTTCTACTCTACCCATTTTGTTGGATGCAGACACTGG
TTATGGAAATTTCAACAATGCCAGAAGGCTTGTCAAGAAATTGGAAGAAA
GGGGCGTTGCTGGGGCTTGCATGGAAGATAAACTTTTCCCTAAGACCAAC
TCTCTCCTTGATGGCAGAGCACAGCCTTTGGCTGATGTTGAAGAATTTGC
TTTGAAAATCAAAGCTTGCAAAGaTACTCAAAGAGATCCAGACTTTTGCA
TTGTTGCACGCGTAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAAGCA
TTGAAAAGATCACACGCTTATGCTGATGCTGGGGCTGATGCTATCTTGAT
GCACAGCAAGCTGAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATGCAT
GGGATAATAAaATTCCTGTAGTGATCGTACCCACAAATTATTACACAACC
CCAACAAACGAATTCCGTGACTGGGGCGTTTCCACCGTGATCTGGGCCAA
CCACAACGTGAGAGCCAGCATCGATGCCATCCAAAAAACAACCAATACTA
TCTTCAAAGAACAATCTTTAGAAAGCATCGAACCCAATGTGGTGACAGTG
AAGGAAATCTTCCGTCTTCAAAACGATACCGAGTTAGTTGAAGCTGAAAA
AGTCTACCTCCCACAAAACTAGACATTAAcccttttaattttcttttcat
tttatgggtgtatcatttttttttacttaaatttTCAAGGGactttgtaa
cttttttatatttatatatagGGGGTGTGGGGCTAGGATTACATATTTAT
ATATACGGActtatttcgttgtttttgttttgttttctgatGACTGTTGT
AGACTATTTGGGATTTATTGACTCTTACCATGCAGAATATATTTAAATGA
GTGACTCgcaatt
Run BLAST on NCBI

protein sequence of TCONS_00058313-protein

>TCONS_00058313-protein ID=TCONS_00058313-protein|Name=TCONS_00058313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MFSRTARQLSKQTCTIRNARFNSSSTRKTTQLKNMLQSNELEFLMEAHSG
LSAKIVEEAGFKGIWGSGLSISASLGVRDSNEASWTQVLDVCEYMSDAST
LPILLDADTGYGNFNNARRLVKKLEERGVAGACMEDKLFPKTNSLLDGRA
QPLADVEEFALKIKACKDTQRDPDFCIVARVEAFIAGWGLEEALKRSHAY
ADAGADAILMHSKLKEPSEIKAFLDAWDNKIPVVIVPTNYYTTPTNEFRD
WGVSTVIWANHNVRASIDAIQKTTNTIFKEQSLESIEPNVVTVKEIFRLQ
NDTELVEAEKVYLPQN
Run BLAST on NCBI

transcript from alignment at scaffold_309:784760..794857-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058313 ID=TCONS_00058313|Name=TCONS_00058313|organism=Clytia hemisphaerica|type=transcript|length=10098bp|location=Sequence derived from alignment at scaffold_309:784760..794857- (Clytia hemisphaerica)
CACTCATCGTGTTTTACACGTGGATGGAGCCAGATGAAGCAGGAACACTC AGAGCTTTTTAGAGGGTCATAAAATTGTTGGTCCCAAACTCCAGAAAACA AAGGCAGGTATACAATTTTGATAGGTTTCTACTCTTTAGCTATGATGTAC TAGGGCACACTGAATCTTATGTTATGGCATGTCCAAAAAGGACATAAGGT TGAGTGTGGTTGGCACAGAGGGCCTTTCACACATGCCATCCATTATGTGA CATGGCATATAATGGGGTCTTTTATATATGTTATATGCCAGACCCGATCA ATAGAACTTGTCGAACCAATCGAACAACCGAACTAATCGAACTCCATCGA ACGATTAAAGTTTGATTAAAATAATTAATCGAACCTAATTAATCGAACAC TCACAATTTTTGAAGCAATAGCAGTTCGATATAGTTCTCAGTCAGTAAAA ACTTCGATTAGTTCGATTATATTAAATCCTCATATCTTCCCTTGCTTGCA AAAACTTTAACCTTGCAAGCGATTGCCATTCCGACAATTCCCGGACTTAA CAGCTTAACGTTTATTGTACCCGGATATTTGTCTATCCAGAACAAAGTCC GTAGCCCCTCTGTTGCGATTTCACGCGCGGCTGAGTGGCGGAATACTACG CCCTAACAAACCGCTTCTGGCGCTAAAAGGATACAGGAAAAGTGTGTAAT CTGTTATCGGAAGTAATTTCCCGATTTACATTCCGAATTTGGCTTTGAAA AGAAGCTAATATACGGTGTGGCGGAGCAGCACAAACTTGTCAAAAAAAAT TGGTTTATCGAACTGATCGAACCAAAACCCATTGATCGAACTTAATCGAA CACTCACAATCTTTTAAAAAATCTTAGAGTTCGATTAAATTTTTTAATTG AACTTTTATCGTTCGATGGAGTTCGATTAGTTAGATTGTTCGATTGGTTT GACAAGTTCGATTTGTTCAGTGTTGCTCGAATCCTTCAGATCCTTGGTTA GAAAAAGCTATACCTGTTTACTTTTTTCTTGCCAGATTCAACAAGCCATC AACCAACAAAATTAATACTGACATCAAAAAATTCACACGACCTTTCCACT AGACACTTCTAAATTATCTGCCATTATTAAGATGTTCCGAAATAACCAAT CTGGGACTTAGCGAGTCGGGAAATGTAAAGTTACGTAAAAGGTAATACAT AATTTTTCCGGGGGTGAAACGTATAAAAAAATTGAAATGGTTTCTTTTTT TCTTCATTATATATTTAAATTTCCATTATCAAAATTCTAAAAATGCTAAT TTGTAGACCATATTAGAAAATGGGTATATATTTCGCAAAATAAACACTTA CAAAAGCTATTACTTACTAATTTTACCCCCACTTTTTAAACAGCGTCTTC TGTGGGCGTGATATCAGGTGGAGAGAAAACGCCCTCATCTTTATTGTTTG TTCCATTTGTCGAGTCTGTCGCAGGGTTCGAATTATAGCTTCGCACTTCG CAAAATGCGAAGTGAATTTTAGATTTAGCGACCCAAAAAGATTTCCCAAC TCAAAAATGCGAAGTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTTT ATCCATTGCTTTATCTAAAACTCGTTACTTCAAAACTTCACTATACTTTG CTTTGTCTATAATCTCTTACTTCAAATCTAACTTCGCTTTTCTCGAGAAA TAAATTGAAGATACTTTCGCATCTTCTTCCAAACAACATCGCAAAATACT AAAAATGTTTCGCAAACAGTGGAAAAATTTTGCCTGCGGCGCTCCTCTGT TACCTCGCTTCGCTCGGAAAAATAGCGAAGCTCCTAAAATTTATAATTCG AACCCTGTGTCGGTCCTATTGTTCATGCTAAATCCATACACGATGACCTC AATGTTTGGCGGCATACCTGAAAATAAAAACAAAAAGATGATCATTATTT TTGCATGAATTACGCTACCTTATACCATGAGTGGTCCTAAATCCGACAGC CCTGCCTAAATCCGACAGGGTCTTTCAAAGATACAAACTAAAATAAAAAC AAACCTTTCGCTGTGACGCAATGAAGATACCAAAGTCTCCACTAAACTGA GAGATTTGATACACTGAACCAATTGAACCAAATTACAATACTGTAATTGC TTCTTATACAAAACATAATTTTTCATAACATAAATTGCCAATGTTTTAAA TCAAACCCTGTTTAAACATGAGTAACGGATTTAGAATAATAGAGGTAATT ATTTTTAAAACTCACACTTTTTTTATCACATTAATCGACATCTTGACATT AAAGTTAATATTATTAGATGTTTTGTTTTGAGAGTCCTTGCAATAGTTTA TTGTTGAACTTGGAGAGGGAATGTTTGTAAACATAGAATTTTTTTCATAG CAGTTATTTGAGGGGTCGGATTTAGGCAAGACTGTCGGATTTAGGACCAT TCACGGTACGTCATTATAAAATTATACAAAACAAAAGTGAGTTTAGGCCG CCCGCCTAGAGAGCGCGGGCCCTAATATTTTTTCTCTCGTGGTCTTCAGG GGAAAACAAAAGTGATCGATATTCTTCGAAGGAAGAACTTGCCAAAAAAA AAACCCTATACAAAAAGATGTATTTTGAGGTTGGGAATGGATCCTGCGAG GATGAAAAAATTTTGACTAGGCGTTTTTTTGGCAAACCCAAAAACTCTAA TTTTTTTCTTCCCTTGAGCTAAAAAGGTTACGGGTTTTGGGCAATCGAGG CAAAAATTAGCAAAAAGCTGGTGTTTTCCGTAAATCTGAGAATCGCGATA ATATCCTCACTCATTTTAGCCAAGGTTCTAACCGTCAGTCAGGGAAATCC CTCAATTACGGTATACTGCAATTACAGTAGTTTTCATTCGTGGTTAGCCT GCAAAGGCTTATAACGGCTACATGTAGTGCTGGTCCGTCGACAAAGATAA ACAAACATCGACTGTAAAAAATCGCACAAGAAGAAAGCTTTTCTTTATTA AAAGAATCTGATCTATGGAAAAAATATTTTGTCTGTGCGTTAAAAAGATA TGATCAATTATGTACAAAAATTGCCTGTTTTCTCCTTGAATCTTGAATTT TGTTTTATGATGAATATACTGCAATTGCGGTATATAAAAAATGTAAAAGT GACAATTACACCGCAATTACAGTAAAAAATTACTACCGCAATTGAGGGAT TTCCCTGACTGACCGTAAGTTGGTCTAATTAATGTCAACATCCTTCTCCT AATTTCAACATCCTTCTTTAAATAAAGATACCGTCAACTACTCTAACTTG GGGGACGATTTGTCGAAACATGGGCAGGCTACTGTGAGATCGGGTAACTT GCATCNTTGGTCGAAACATGGGCAGGCTACTGTGAGATCAGGTAACTTGC ATCAGCGGAGGCTAACATGCATAGCCCTCAAATGAAAGACCTGGCTGGTC ATTAAAATACAAACTCAAATCAAAACAAAAATGGTAGAGTAGAGCTGCGA GCGGAGCTGCGTAGTTGTATTTCAATGACCAGACAGGTCATTCATTTTAG GGCTATGCATGTTTGCTACCACTGATGCAAGTTACCCGATCTCACGGTAG CTCTTATAAGCTTTAAAACAGCATCTAATAACATGAAAACCAGAATATGA TTCTTCAATGGGAATCAAAAATATAAAGTGCACTTACAAACATCAATTTG TCTGACAGTTAGTGGAATTACCTCGATTTTAAGCATGTTCAAAGTTCACA ATAACGACTTTCTTTTTATTACAGAAACCAAACGAGTGAGAACAAGTCAT AAAACTAAAAGTCAACGCTCTTAGCTAGTCGCGCTGATGATATCGAAAAA AGTGGCTAGAAAACTATTTTCGTGATACATCTCTGAGATATAATTTTTTT TGATGGACACTCGCGAATTTGTATGCGTAGATTCCAAAATCAAAAAGTTT GCACGATGTTACGAGTAAATCGACTTAAAAGTTGACTTCAATCTGCTTCA ATCGATTTGGTCGATTTTGATTGATTTTAACAAATTTAGCAGTTTCTAGC AGTTTCTAGATCATGAATTTTCACTTTTATGACATTTTTTGCTTGTAAAT ACTCAAACTCATCAAATACACCGTTTAGTAGCGTCGACTGCGCACACGTC CAAACAATTTTCCATTGTTTTGATTTTAGCAATCGCGGGAAACTACGGGG AGAGCGTAAAAAACGGTAGATAAAAATTTGGTTTCTATAAGAAAACCCAG CCAGAAAAACAGTAGGTAAAAAACTCCTTTTAATCATAACTTCTTTTCCT CTTGATGAATTTTGTGAAATTTTCAGGAGAGATCCATAAAATTATCATTG ATATCATGTTCAAATATCTTAATCATTATCTTTAAAGGAAAGAAAAAAAT TGATAATGTTTACATTCCTCTAACCCTTCACAGTACTAAAGTGCGTATTT TTACCTACATGAAAATACCTCTGGAATTTGAAAGAAAAAGATCTATTGGT CGTGCTTTTCTGTATGTTTCTCTCCAAAAAGGGACTTGATCTACGTTTTC ACAGTGGAACACGGTTGAGAAAGTGAGACTCCTAAACGGTGTATTATTCC ACAAACAATTGATATAAGCGAAGAAAATATAGAAAAGTGGCTAAAATGGA TAAAATTATCGATGAATATTGAATGCATAATCTGTTTACCCGATAGACTT CGATTCAGTCTGTAGACTTAAAAAATGGTCAGATTTGGCTAAAATTTTGC ACATACGTCCCTAAGGTTAATATCTTTTGATTTAATTTTTAATTTTTTCA AAGAAAATCGATTTTGGGGGTCTGGGGACAAGTATAATGGTAAACTGAGG CTGAGACTTCAGGAAAGTATGTAGGCTTAAAAAACACTTGGACGGGATTT TTGTGCATACTTAATTTTGTTAGTTTTTAGGCAAAATGTTGCAAAATTTT GCACCTTATATGCTAAGTTACAAGCAACATGTCTTTCGTTTTTTCAAACC TTTTCTTTCAGAATATCCAATTTAGTGAATAGCAAAATTAAATACAGGCA TAAAATACCCTCAGCATTGAGTTCTTGGTGATTTTCTGACTCAACATTGA TAGTGGGATCCAGAGGACAGATTTTTTTAGCTCTTGACAGCTGCCAACTT TCAGTTTTAAACATCATTTTACTTTGAAAGCAATGTTTTCTTTACAAAAA GGCAAAGTTTTTTACTTCATGTTGTCTTGTATGTAATAGATTTCACTAGT TTTTCTTTTTTTAAATGTTGCATTGCCACAATTTGTTGTTAAGTCAACCT GAGTCAACCTTAATTTCATTTACTTGTTAAATAAAAACTTTAATGAAGCG TGGAAAAACACAAACTCAGATATTTAACAAATTAGAATTGTAATCATACC GTTTAGTAGAGGCCCACCTCGGGCCTGTGAGCTTGTATACTTTATAATAA TAATAACAATAATAATAAATGTTGCAATTTTTTTAGCCCTCAAAATAAAA AAAAATGTTTTCAAGAACAGCCAGACAGTTATCCAAACAAACATGTACCA TCAGAAATGCAAGATTCAACTCTTCAAGCACAAGGGTAATAAACAGTTTT ATGCAATGTAAACCACATTATTACGAATTAGAATCACACATTTTAAAAAT ATCTTGTGTTTTGCTCTTTTTCCTAACAAACAGCTATACTTCAGATAAAA ATCAATTTCTAAACGTAATATCTAAAAGTAAATGCTCTATAGAAAAGAAA TTACCTGATCACAGTCAAATTAATCCTTGAATTCGTTTTGACTTTTCAGA AAACAACACAATTGAAGAACATGTTGCAATCGAATGAATTGGAATTTTTG ATGGAAGCCCACAGTGGTTTATCTGCTAAGATTGTTGAGGAAGCAGGTAA TGCAAGAAATCAAAAAAGTGAATGAACTAGAAAGAACAAACTCAAACAAT AAATGAAATAATTTTAAAAAGAACATGATAAGAAGTCAATTTCACAAACC CCTTCTCTACTTCTGTATTTTAGGTTTTAAAGGTATTTGGGGCAGTGGCT TATCTATTTCTGCTTCACTTGGTGTAAGAGACAGTAACGAGGCCTCATGG ACACAAGTATTGGATGTTTGTGAATATATGAGCGATGCTTCTACTCTACC CATTTTGTTGGATGCAGACACTGGTTATGGAAATTTCAACAATGCCAGAA GGCTTGTCAAGAAATTGGAAGAAAGGGGCGTTGCTGGGGCTTGCATGGAA GATAAACTTTTCCCTAAGACCAACTCTCTCCTTGATGGCAGAGCACAGCC TTTGGCTGATGTTGAAGAATTTGCTTTGAAAATCAAAGCTTGCAAAGGTC ACTATTTTTCTCTCCTTATGAAAAAAACAATATTTTAAGGTTTCCTTAGG TTAGAGAAAAGGGTTGATAGGGACCTATGCAGAACAACACAGAAAGTATT GGCTATTCCAAATAAGTAGAAAGTGAGAACTAACTTTTTATCTAATGTTG CCATAGTGATGTACAGCTCATATTAACAAAATCGCTAGGAGATTCTGCAT AAGAAAGTATATTTACCCCCTAAAGTTTGCATTAAAAAAAAACTAAAACA AAATAATTAGTCACACAACACTAATTGTGCAGATTTTTTAAATGTTTCAA CAGTAGAAATCTATTAATTTGTAACATAGTTAACGACACAAGACCTAGTA TATGACGAGCTGTATCTAAAGGGAAGAAATTTTTGCAATATTTAATTTCG CGTTTTTTTGACAAATCCGTGAAATCAAATTTAGCGAAACACGAATATTC TCAGGATTTAAAAATTCACCTCTAAAATTGGTCATTTTAGGGCAAAATAG GCCATTTTGTAAACAAAAAAGTCCCTCAACTGCAAAATTGAAATTCCGGA AATTCCGAATTCCGATTTGTGAACCGCATAATTAAATTGTGTGAAAATAT CTTCCTGCAAAAATTTCTTCCCTTAAAAGGTAATTCTATTGTTTTTAAAA CAATGTTTTTCTATCTAGCAAACTCTTGGTTATTCCTTTTGGGATTGTTT ATTTTAGTTTTTCTTTTTGATTTCAGATACTCAAAGAGATCCAGACTTTT GCATTGTTGCACGCGTAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAA GCATTGAAAAGATCACACGCTTATGCTGATGCTGGGGCTGATGCTATCTT GATGCACAGCAAGCTGAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATG CATGGGATAATAAAGTAAGTACACGTTTTTTCTTATAAGAACAAACTATA TAAGAACATAAGGCTTCGATGGCCAAAATCCTAAGAGCAAGTTAGCTTTG CGGACGCTAAATTTTTTAGAAAAATGGACCAAAATACTCACAAAAAGTTA AGAGCGTAATGCTTTGGCCAAAATATCAAGATACCAAATTAAGAACATTC TGATAGGTGAAATTAAGAACATCTTAAGAACATCTTTAGGCTTAAAACTC GAAAAGTTAAGAACATCTGAGGGCTTTAAAAAATTTGGACGTTCTTATAT AAAAAAACGTGTACCACAGATCCTCATTCATTATTGGGTCAGCTTGCCTG ACCTGAAAGTATAGCTTTTAATTTAAAGGTTTTCTTTTTAGATAAGTGTT CCCGTTTCATATCAGACAGGACTGCAGTGTCTTGCTATTGTTATGTTATG CTGATATAACCATAAATTTTTTTTTCTTTTCCTCTTTCTGAGAATTCTTG CTCCACATCTGTGTCAATCCAATGTGAAAAAGTTTGTGAATTGAAATTGA TGAGTAAGCAAACGATATCACTCTTATTTAAAAACAAAACCTTTAAGATA AATGGATCTTCTGGAAAGCTCGTTAAATATTGAGAAATTGTATATTGTGA AATGAGTTGTCAGTTTCCCTCCATTTGTCTCTTATTAAAGGAATTTTAAG CTTTCTGCCAATCTGCATTTTTAATCTGAAAGAAAAATACCAATGAAAAA ATTCTCACAAAGCTGTCCAATAGCTTATTAATTTAAATGGGCGTAATTTT TCAGGAGGACTCGACTGGGTGACTGGGTGACCCACGAGAAGCTTTGCGGA CAGTTTTATTTACCTTTTATTTCGAGTAAAAAACGTTGTTCAACTTTGCC CTTTAGATTCCTGTAGTGATCGTACCCACAAATTATTACACAACCCCAAC AAACGAATTCCGTGACTGGGGCGTTTCCACCGTGATCTGGGCCAACCACA ACGTGAGAGCCAGCATCGATGCCATCCAAAAAACAACCAATACTATCTTC AAAGAACAATCTTTAGAAAGCATCGAACCCAATGTAAGCAACTTCTTCAA TTCCATTTGAATTGATTTCCTGTCGATTCCACTCATAAATATCCAATAGT CCAACAAACAAAATCAAAATGAAATTTACAAAGTTTTATGTTTCAAAAAT ATGAACGATTTATAATGCTACGTTATCGTATTAAAGATCTCACTATTTCT TTCCTGGGAAAGAATGGAGATTCAATTCTAGCCCTTTCGGGGCTTTACAT CCAATGGGGTGAACCCCAATGAAGTTTAAGCCCGACGGGCTAGAAGCGAA TATCCTTGATAGTATTTGAAGCCAATAAATCCTACTAAAGTCGCGCGGCC TAGCGCAGCCCGCCTAGTTTTTGCACAAATGCCAGATTTAAACTAAAATT TACCACTAAATTTTGAGAAAAATATCACTCGAAAACAAAGGAATTACGAA CTAAAGTCTGTCCAGATATAATTGGCAGTGGAAACAAGAATGCCTGTAAC TTTTGATAGTCAAATATAATTATGGAAATAATAACCCCCATTTTTAGTAA TAAGTTGGAGATTTGATATTTCACAGAAAAGTGCTACCAAGGGATATTTC GGGTCCCATATCTTCCGAAGGACTTTTCTGTTTGCCTTGAAATTTAACAA ACTTCTTAACCTAAGGTTGAACTACCACTGGTGTAAAAATGTTAAAACGT TATAGCATAAGTAGAAAAAAAGCTCAATTTTTACAATCGCAAATTTAACC GCTAAAAATCGCGAATTTTTCAACCAAAAATACATTCAAATATAGCGCTT TTGATTCTCTAAAACAAACAAAAAAAATTTCCATAATTATAATATTTGAC TATCAAAAGTTGCAAGCATTTTTGTTTCCACTGCCAATTATATCTGGACA GACTTTAGATTCAATCTGTCGTCAAAAATACGACGCATAATTTAAGGCTT TACTTGCCCTTGCCTGTGAAAGGTAAAAGATTCGCTTCTAGCCCTTCGGG CTTATACCTCATTGGTGATACCTCATTGGTGAACCCATGCCACTCTAATT CCATTGTTTTGCGTCCATTTCAGGTGGTGACAGTGAAGGAAATCTTCCGT CTTCAAAACGATACCGAGTTAGTTGAAGCTGAAAAAGTCTACCTCCCACA AAACTAGACATTAACCCTTTTAATTTTCTTTTCATTTTATGGGTGTATCA TTTTTTTTTACTTAAATTTTCAAGGGACTTTGTAACTTTTTTATATTTAT ATATAGGGGGTGTGGGGCTAGGATTACATATTTATATATACGGACTTATT TCGTTGTTTTTGTTTTGTTTTCTGATGACTGTTGTAGACTATTTGGGATT TATTGACTCTTACCATGCAGAATATATTTAAATGAGTGACTCGCAATT

Coding sequence (CDS) from alignment at scaffold_309:784760..794857-

>TCONS_00058313 ID=TCONS_00058313|Name=TCONS_00058313|organism=Clytia hemisphaerica|type=CDS|length=5706bp|location=Sequence derived from alignment at scaffold_309:784760..794857- (Clytia hemisphaerica)
GTGGTGACAGTGAAGGAAATCTTCCGTCTTCAAAACGATACCGAGTTAGT
TGAAGCTGAAAAAGTCTACCTCCCACAAAACTAGATTCCTGTAGTGATCG
TACCCACAAATTATTACACAACCCCAACAAACGAATTCCGTGACTGGGGC
GTTTCCACCGTGATCTGGGCCAACCACAACGTGAGAGCCAGCATCGATGC
CATCCAAAAAACAACCAATACTATCTTCAAAGAACAATCTTTAGAAAGCA
TCGAACCCAATATACTCAAAGAGATCCAGACTTTTGCATTGTTGCACGCG
TAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAAGCATTGAAAAGATCA
CACGCTTATGCTGATGCTGGGGCTGATGCTATCTTGATGCACAGCAAGCT
GAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATGCATGGGATAATAAAG
TTTTAAAGGTATTTGGGGCAGTGGCTTATCTATTTCTGCTTCACTTGGTG
TAAGAGACAGTAACGAGGCCTCATGGACACAAGTATTGGATGTTTGTGAA
TATATGAGCGATGCTTCTACTCTACCCATTTTGTTGGATGCAGACACTGG
TTATGGAAATTTCAACAATGCCAGAAGGCTTGTCAAGAAATTGGAAGAAA
GGGGCGTTGCTGGGGCTTGCATGGAAGATAAACTTTTCCCTAAGACCAAC
TCTCTCCTTGATGGCAGAGCACAGCCTTTGGCTGATGTTGAAGAATTTGC
TTTGAAAATCAAAGCTTGCAAAGAAAACAACACAATTGAAGAACATGTTG
CAATCGAATGAATTGGAATTTTTGATGGAAGCCCACAGTGGTTTATCTGC
TAAGATTGTTGAGGAAGCAGATGTTTTCAAGAACAGCCAGACAGTTATCC
AAACAAACATGTACCATCAGAAATGCAAGATTCAACTCTTCAAGCACAAG
GGTGGTGACAGTGAAGGAAATCTTCCGTCTTCAAAACGATACCGAGTTAG
TTGAAGCTGAAAAAGTCTACCTCCCACAAAACTAGATTCCTGTAGTGATC
GTACCCACAAATTATTACACAACCCCAACAAACGAATTCCGTGACTGGGG
CGTTTCCACCGTGATCTGGGCCAACCACAACGTGAGAGCCAGCATCGATG
CCATCCAAAAAACAACCAATACTATCTTCAAAGAACAATCTTTAGAAAGC
ATCGAACCCAATATACTCAAAGAGATCCAGACTTTTGCATTGTTGCACGC
GTAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAAGCATTGAAAAGATC
ACACGCTTATGCTGATGCTGGGGCTGATGCTATCTTGATGCACAGCAAGC
TGAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATGCATGGGATAATAAA
GTTTTAAAGGTATTTGGGGCAGTGGCTTATCTATTTCTGCTTCACTTGGT
GTAAGAGACAGTAACGAGGCCTCATGGACACAAGTATTGGATGTTTGTGA
ATATATGAGCGATGCTTCTACTCTACCCATTTTGTTGGATGCAGACACTG
GTTATGGAAATTTCAACAATGCCAGAAGGCTTGTCAAGAAATTGGAAGAA
AGGGGCGTTGCTGGGGCTTGCATGGAAGATAAACTTTTCCCTAAGACCAA
CTCTCTCCTTGATGGCAGAGCACAGCCTTTGGCTGATGTTGAAGAATTTG
CTTTGAAAATCAAAGCTTGCAAAGAAAACAACACAATTGAAGAACATGTT
GCAATCGAATGAATTGGAATTTTTGATGGAAGCCCACAGTGGTTTATCTG
CTAAGATTGTTGAGGAAGCAGATGTTTTCAAGAACAGCCAGACAGTTATC
CAAACAAACATGTACCATCAGAAATGCAAGATTCAACTCTTCAAGCACAA
GGGTGGTGACAGTGAAGGAAATCTTCCGTCTTCAAAACGATACCGAGTTA
GTTGAAGCTGAAAAAGTCTACCTCCCACAAAACTAGATTCCTGTAGTGAT
CGTACCCACAAATTATTACACAACCCCAACAAACGAATTCCGTGACTGGG
GCGTTTCCACCGTGATCTGGGCCAACCACAACGTGAGAGCCAGCATCGAT
GCCATCCAAAAAACAACCAATACTATCTTCAAAGAACAATCTTTAGAAAG
CATCGAACCCAATATACTCAAAGAGATCCAGACTTTTGCATTGTTGCACG
CGTAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAAGCATTGAAAAGAT
CACACGCTTATGCTGATGCTGGGGCTGATGCTATCTTGATGCACAGCAAG
CTGAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATGCATGGGATAATAA
AGTTTTAAAGGTATTTGGGGCAGTGGCTTATCTATTTCTGCTTCACTTGG
TGTAAGAGACAGTAACGAGGCCTCATGGACACAAGTATTGGATGTTTGTG
AATATATGAGCGATGCTTCTACTCTACCCATTTTGTTGGATGCAGACACT
GGTTATGGAAATTTCAACAATGCCAGAAGGCTTGTCAAGAAATTGGAAGA
AAGGGGCGTTGCTGGGGCTTGCATGGAAGATAAACTTTTCCCTAAGACCA
ACTCTCTCCTTGATGGCAGAGCACAGCCTTTGGCTGATGTTGAAGAATTT
GCTTTGAAAATCAAAGCTTGCAAAGAAAACAACACAATTGAAGAACATGT
TGCAATCGAATGAATTGGAATTTTTGATGGAAGCCCACAGTGGTTTATCT
GCTAAGATTGTTGAGGAAGCAGATGTTTTCAAGAACAGCCAGACAGTTAT
CCAAACAAACATGTACCATCAGAAATGCAAGATTCAACTCTTCAAGCACA
AGGGTGGTGACAGTGAAGGAAATCTTCCGTCTTCAAAACGATACCGAGTT
AGTTGAAGCTGAAAAAGTCTACCTCCCACAAAACTAGATTCCTGTAGTGA
TCGTACCCACAAATTATTACACAACCCCAACAAACGAATTCCGTGACTGG
GGCGTTTCCACCGTGATCTGGGCCAACCACAACGTGAGAGCCAGCATCGA
TGCCATCCAAAAAACAACCAATACTATCTTCAAAGAACAATCTTTAGAAA
GCATCGAACCCAATATACTCAAAGAGATCCAGACTTTTGCATTGTTGCAC
GCGTAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAAGCATTGAAAAGA
TCACACGCTTATGCTGATGCTGGGGCTGATGCTATCTTGATGCACAGCAA
GCTGAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATGCATGGGATAATA
AAGTTTTAAAGGTATTTGGGGCAGTGGCTTATCTATTTCTGCTTCACTTG
GTGTAAGAGACAGTAACGAGGCCTCATGGACACAAGTATTGGATGTTTGT
GAATATATGAGCGATGCTTCTACTCTACCCATTTTGTTGGATGCAGACAC
TGGTTATGGAAATTTCAACAATGCCAGAAGGCTTGTCAAGAAATTGGAAG
AAAGGGGCGTTGCTGGGGCTTGCATGGAAGATAAACTTTTCCCTAAGACC
AACTCTCTCCTTGATGGCAGAGCACAGCCTTTGGCTGATGTTGAAGAATT
TGCTTTGAAAATCAAAGCTTGCAAAGAAAACAACACAATTGAAGAACATG
TTGCAATCGAATGAATTGGAATTTTTGATGGAAGCCCACAGTGGTTTATC
TGCTAAGATTGTTGAGGAAGCAGATGTTTTCAAGAACAGCCAGACAGTTA
TCCAAACAAACATGTACCATCAGAAATGCAAGATTCAACTCTTCAAGCAC
AAGGGTGGTGACAGTGAAGGAAATCTTCCGTCTTCAAAACGATACCGAGT
TAGTTGAAGCTGAAAAAGTCTACCTCCCACAAAACTAGATTCCTGTAGTG
ATCGTACCCACAAATTATTACACAACCCCAACAAACGAATTCCGTGACTG
GGGCGTTTCCACCGTGATCTGGGCCAACCACAACGTGAGAGCCAGCATCG
ATGCCATCCAAAAAACAACCAATACTATCTTCAAAGAACAATCTTTAGAA
AGCATCGAACCCAATATACTCAAAGAGATCCAGACTTTTGCATTGTTGCA
CGCGTAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAAGCATTGAAAAG
ATCACACGCTTATGCTGATGCTGGGGCTGATGCTATCTTGATGCACAGCA
AGCTGAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATGCATGGGATAAT
AAAGTTTTAAAGGTATTTGGGGCAGTGGCTTATCTATTTCTGCTTCACTT
GGTGTAAGAGACAGTAACGAGGCCTCATGGACACAAGTATTGGATGTTTG
TGAATATATGAGCGATGCTTCTACTCTACCCATTTTGTTGGATGCAGACA
CTGGTTATGGAAATTTCAACAATGCCAGAAGGCTTGTCAAGAAATTGGAA
GAAAGGGGCGTTGCTGGGGCTTGCATGGAAGATAAACTTTTCCCTAAGAC
CAACTCTCTCCTTGATGGCAGAGCACAGCCTTTGGCTGATGTTGAAGAAT
TTGCTTTGAAAATCAAAGCTTGCAAAGAAAACAACACAATTGAAGAACAT
GTTGCAATCGAATGAATTGGAATTTTTGATGGAAGCCCACAGTGGTTTAT
CTGCTAAGATTGTTGAGGAAGCAGATGTTTTCAAGAACAGCCAGACAGTT
ATCCAAACAAACATGTACCATCAGAAATGCAAGATTCAACTCTTCAAGCA
CAAGGGTGGTGACAGTGAAGGAAATCTTCCGTCTTCAAAACGATACCGAG
TTAGTTGAAGCTGAAAAAGTCTACCTCCCACAAAACTAGATTCCTGTAGT
GATCGTACCCACAAATTATTACACAACCCCAACAAACGAATTCCGTGACT
GGGGCGTTTCCACCGTGATCTGGGCCAACCACAACGTGAGAGCCAGCATC
GATGCCATCCAAAAAACAACCAATACTATCTTCAAAGAACAATCTTTAGA
AAGCATCGAACCCAATATACTCAAAGAGATCCAGACTTTTGCATTGTTGC
ACGCGTAGAGGCTTTCATTGCTGGATGGGGCTTGGAAGAAGCATTGAAAA
GATCACACGCTTATGCTGATGCTGGGGCTGATGCTATCTTGATGCACAGC
AAGCTGAAAGAACCCTCTGAAATCAAAGCTTTCCTTGATGCATGGGATAA
TAAAGTTTTAAAGGTATTTGGGGCAGTGGCTTATCTATTTCTGCTTCACT
TGGTGTAAGAGACAGTAACGAGGCCTCATGGACACAAGTATTGGATGTTT
GTGAATATATGAGCGATGCTTCTACTCTACCCATTTTGTTGGATGCAGAC
ACTGGTTATGGAAATTTCAACAATGCCAGAAGGCTTGTCAAGAAATTGGA
AGAAAGGGGCGTTGCTGGGGCTTGCATGGAAGATAAACTTTTCCCTAAGA
CCAACTCTCTCCTTGATGGCAGAGCACAGCCTTTGGCTGATGTTGAAGAA
TTTGCTTTGAAAATCAAAGCTTGCAAAGAAAACAACACAATTGAAGAACA
TGTTGCAATCGAATGAATTGGAATTTTTGATGGAAGCCCACAGTGGTTTA
TCTGCTAAGATTGTTGAGGAAGCAGATGTTTTCAAGAACAGCCAGACAGT
TATCCAAACAAACATGTACCATCAGAAATGCAAGATTCAACTCTTCAAGC
ACAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036729XLOC_036729Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058313-proteinTCONS_00058313-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058313-exon-scaffold_309-1575043694:794755..794857TCONS_00058313-exon-scaffold_309-1575043694:794755..794857Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1575043694:788873..788971TCONS_00058313-exon-scaffold_309-1575043694:788873..788971Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1575043694:788562..788658TCONS_00058313-exon-scaffold_309-1575043694:788562..788658Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1575043694:788111..788434TCONS_00058313-exon-scaffold_309-1575043694:788111..788434Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1575043694:787194..787381TCONS_00058313-exon-scaffold_309-1575043694:787194..787381Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1575043694:786125..786301TCONS_00058313-exon-scaffold_309-1575043694:786125..786301Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1575043694:784760..785084TCONS_00058313-exon-scaffold_309-1575043694:784760..785084Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1510915933:794755..794857TCONS_00058313-exon-scaffold_309-1510915933:794755..794857Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1510915933:788873..788971TCONS_00058313-exon-scaffold_309-1510915933:788873..788971Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1510915933:788562..788658TCONS_00058313-exon-scaffold_309-1510915933:788562..788658Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1510915933:788111..788434TCONS_00058313-exon-scaffold_309-1510915933:788111..788434Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1510915933:787194..787381TCONS_00058313-exon-scaffold_309-1510915933:787194..787381Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1510915933:786125..786301TCONS_00058313-exon-scaffold_309-1510915933:786125..786301Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1510915933:784760..785084TCONS_00058313-exon-scaffold_309-1510915933:784760..785084Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1491911889:794755..794857TCONS_00058313-exon-scaffold_309-1491911889:794755..794857Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1491911889:788873..788971TCONS_00058313-exon-scaffold_309-1491911889:788873..788971Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1491911889:788562..788658TCONS_00058313-exon-scaffold_309-1491911889:788562..788658Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1491911889:788111..788434TCONS_00058313-exon-scaffold_309-1491911889:788111..788434Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1491911889:787194..787381TCONS_00058313-exon-scaffold_309-1491911889:787194..787381Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1491911889:786125..786301TCONS_00058313-exon-scaffold_309-1491911889:786125..786301Clytia hemisphaericaexon
TCONS_00058313-exon-scaffold_309-1491911889:784760..785084TCONS_00058313-exon-scaffold_309-1491911889:784760..785084Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:784760..794857 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (18.8568 tpm) - - (174.745 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
136.776 125.184 57.6118 72.9115 55.3981 51.2627 103.828 118.553 50.9218 63.5548 26.4848 53.163 46.2589 47.7179 45.3272 53.7634 50.4625 53.1592 18.8568 27.0021 49.1961 44.9102 69.9182 54.9868 54.6303 63.5174 174.745 129.574 24.87 21.6434
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012698PEnolPyrv_PMutase_core
IPR015813Pyrv/PenolPyrv_Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0050188phosphoenolpyruvate mutase activity
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050188 phosphoenolpyruvate mutase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058313 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
1002003004005006007008009001000110012001300Sequence
Match NameE-valueIdentityDescription
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