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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058350 ID=TCONS_00058350|Name=TCONS_00058350|organism=Clytia hemisphaerica|type=transcript|length=1108bp
cgcgaaaattagttttgcgaaattcttgaaaacttttaggaaaatgaagg
aattttgacaaaaagtaGGTGTCAACCACGAAAATTAGTTaccacgaaaa
ttagttttcTTAGGTAGTTATACTGATATAGATATTGATACGGTTCGGCG
GCTTGCTTTTAAGATGGAGCGAAGGAGCTGGACAATGAGAGTGCATTTTC
AGAACCAAATTGTATTTTGTTTACAGTTTTTTGCCATACAATACAATGTA
ATGAAACGCGATATATTTTTGGTATACATTTATGACCAAAAAGTGTAATC
GTTATCTCAATGATCAAGTTATTCATTAATCAAGTGACGTGGCTTTCTGT
ATAATACACTTCTCTAATGACGAATGTTCGAATGACGCATATCAAAATGA
ATGTCTACTATCGTCGTGCGTGTGACTAGGCAGTTGACACTTCATGCAAT
GGACGTATGTCGCTGAAAAAACCTTTATGCctcaattcttgatatgcgta
agtcaagattacgtcattttttaaatcggaaacacccgaaaaaaccgGGA
TTTGACCCATGTGTTGCTATTTTTACTAACACTcaggggtcaaattccag
tGTTTTCGGGTGTTTCAGATAGTGagaatgacgtaatcttgacttacacg
catatcaagaatatcaattttgatgaaccaattttttggaaaaatttgtc
aaatctAAGAtcagtccaaaaaaaaaagtttcattgtATATTATCATTGC
CCCATCATCAATCTTATCATTTTCTAATATAAAGAAATAGAATTCTTTAA
GATGCaaattaaaaatggaaaaaaagagaGATTCATTTGATTTATTCATG
AGACAAGACAAGCCAAGCTATCTGTATGTATGTGGTTTGTTATaatcata
attttttcaaatggtGAAGTGAAGTTTTAAGAAGCGATGGCCAAATGGTC
AAAGGCGTCAACGTCTCTAACTAGGGGATcacggttcgaatccccgctcc
ttccaatgttttGTTCAGTttatagatagccgagccgatTGGCCGTGGAC
CccatgaaaacaatcgaaagactgtttAAAAggcctagattactgggcta
tccaggta Run BLAST on NCBI transcript from alignment at scaffold_309:868245..869352 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058350 ID=TCONS_00058350|Name=TCONS_00058350|organism=Clytia hemisphaerica|type=transcript|length=1108bp|location=Sequence derived from alignment at scaffold_309:868245..869352 (Clytia hemisphaerica)
tacctggatagcccagtaatctaggccTTTTaaacagtctttcgattgtt
ttcatggGGTCCACGGCCAatcggctcggctatctataaACTGAACaaaa
cattggaaggagcggggattcgaaccgtgATCCCCTAGTTAGAGACGTTG
ACGCCTTTGACCATTTGGCCATCGCTTCTTAAAACTTCACTTCaccattt
gaaaaaattatgattATAACAAACCACATACATACAGATAGCTTGGCTTG
TCTTGTCTCATGAATAAATCAAATGAATCtctctttttttccatttttaa
tttGCATCTTAAAGAATTCTATTTCTTTATATTAGAAAATGATAAGATTG
ATGATGGGGCAATGATAATATacaatgaaacttttttttttggactgaTC
TTagatttgacaaatttttccaaaaaattggttcatcaaaattgatattc
ttgatatgcgtgtaagtcaagattacgtcattctCACTATCTGAAACACC
CGAAAACactggaatttgacccctgAGTGTTAGTAAAAATAGCAACACAT
GGGTCAAATCCcggttttttcgggtgtttccgatttaaaaaatgacgtaa
tcttgacttacgcatatcaagaattgagGCATAAAGGTTTTTTCAGCGAC
ATACGTCCATTGCATGAAGTGTCAACTGCCTAGTCACACGCACGACGATA
GTAGACATTCATTTTGATATGCGTCATTCGAACATTCGTCATTAGAGAAG
TGTATTATACAGAAAGCCACGTCACTTGATTAATGAATAACTTGATCATT
GAGATAACGATTACACTTTTTGGTCATAAATGTATACCAAAAATATATCG
CGTTTCATTACATTGTATTGTATGGCAAAAAACTGTAAACAAAATACAAT
TTGGTTCTGAAAATGCACTCTCATTGTCCAGCTCCTTCGCTCCATCTTAA
AAGCAAGCCGCCGAACCGTATCAATATCTATATCAGTATAACTACCTAAg
aaaactaattttcgtggtAACTAATTTTCGTGGTTGACACCtactttttg
tcaaaattccttcattttcctaaaagttttcaagaatttcgcaaaactaa
ttttcgcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058350-exon-scaffold_309-1491911889:868245..869352 | TCONS_00058350-exon-scaffold_309-1491911889:868245..869352 | Clytia hemisphaerica | exon |
| TCONS_00058350-exon-scaffold_309-1510915933:868245..869352 | TCONS_00058350-exon-scaffold_309-1510915933:868245..869352 | Clytia hemisphaerica | exon |
| TCONS_00058350-exon-scaffold_309-1575043694:868245..869352 | TCONS_00058350-exon-scaffold_309-1575043694:868245..869352 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_309 | supercontig | scaffold_309:868245..869352 . |
Blast
The following BLAST results are available for this feature:
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