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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058385 ID=TCONS_00058385|Name=TCONS_00058385|organism=Clytia hemisphaerica|type=transcript|length=936bp
tgaattttactttGAATTTCCTCTATGATGTATATAATATGTCACTTTat
gaggaaatttttttttcattcaggtctatttatataatacatttcaaaag
tttcatgcaaaaaaaaccTTATGGGCTCGAAAGGATATGGATGGGGATAC
TATTAAAGcaagaaaagtttcaaaatttactcAGGAACCAGTCATGGCAC
TTGGACAGATAAAGATGATTAATTAATTATCTTGGAACAATCTTTGTTTG
AGTTTTTTGGTAGAAATGGAAAAGTCCAAACTTACGATTTTAAAGATGTG
GTCCATATAATTGAATGGACACGTGATGCTTTGTCAGCCAAAAGAAAAAT
GGATGATATATTTATTGTTGGTTGATATGCTTGAAGTCATTTTCCAGCTT
GGTAAATAATGTGTTTAGACTTTTTGACGATTGTTTGTGGACAAAGTTAA
AATTGAGCTATATATATGCATATTATACTCGAATAGATTcagatttattt
ttattgtgaCTTTTATACCATTGTTGAAAACAAATGTTGAAACAGTGCTC
GATACACTGGGTGACTAATTGTGACTTTTATCAATATTATGATTAGAATC
TGTATGTGAGGATTTGAAGCCAGCTCAATATACATCCAGTTCAAATGTAA
TCAGCCATTAAATtataaaatgctgaaaatgCCCATGTAAGCTAAATCTT
AGCTTTTTTGAAGCTGCAGTTTGTTTTACAAACAAAGTTTCAAGGTTAAA
ATTGTCACCAGAAAAGCGTATAATTCATAACACTTGGAGATTGCAATATA
TTTAACATTAAAAAACTTTGATTAATATATAGTttgtataatatatatat
acagtattatttatttcaaacttataaatttcatttatttGTATGTATTG
TAGTCTGAACCCTCTTTTTACAAATATCATTCATTC Run BLAST on NCBI transcript from alignment at scaffold_31:16845..17780 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058385 ID=TCONS_00058385|Name=TCONS_00058385|organism=Clytia hemisphaerica|type=transcript|length=936bp|location=Sequence derived from alignment at scaffold_31:16845..17780 (Clytia hemisphaerica)
GAATGAATGATATTTGTAAAAAGAGGGTTCAGACTACAATACATACaaat
aaatgaaatttataagtttgaaataaataatactgtatatatatattata
caaACTATATATTAATCAAAGTTTTTTAATGTTAAATATATTGCAATCTC
CAAGTGTTATGAATTATACGCTTTTCTGGTGACAATTTTAACCTTGAAAC
TTTGTTTGTAAAACAAACTGCAGCTTCAAAAAAGCTAAGATTTAGCTTAC
ATGGGcattttcagcattttataATTTAATGGCTGATTACATTTGAACTG
GATGTATATTGAGCTGGCTTCAAATCCTCACATACAGATTCTAATCATAA
TATTGATAAAAGTCACAATTAGTCACCCAGTGTATCGAGCACTGTTTCAA
CATTTGTTTTCAACAATGGTATAAAAGtcacaataaaaataaatctgAAT
CTATTCGAGTATAATATGCATATATATAGCTCAATTTTAACTTTGTCCAC
AAACAATCGTCAAAAAGTCTAAACACATTATTTACCAAGCTGGAAAATGA
CTTCAAGCATATCAACCAACAATAAATATATCATCCATTTTTCTTTTGGC
TGACAAAGCATCACGTGTCCATTCAATTATATGGACCACATCTTTAAAAT
CGTAAGTTTGGACTTTTCCATTTCTACCAAAAAACTCAAACAAAGATTGT
TCCAAGATAATTAATTAATCATCTTTATCTGTCCAAGTGCCATGACTGGT
TCCTgagtaaattttgaaacttttcttgCTTTAATAGTATCCCCATCCAT
ATCCTTTCGAGCCCATAAggttttttttgcatgaaacttttgaaatgtat
tatataaatagacctgaatgaaaaaaaaatttcctcatAAAGTGACATAT
TATATACATCATAGAGGAAATTCaaagtaaaattca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058385-exon-scaffold_31-1491911889:16845..17780 | TCONS_00058385-exon-scaffold_31-1491911889:16845..17780 | Clytia hemisphaerica | exon |
| TCONS_00058385-exon-scaffold_31-1510915933:16845..17780 | TCONS_00058385-exon-scaffold_31-1510915933:16845..17780 | Clytia hemisphaerica | exon |
| TCONS_00058385-exon-scaffold_31-1575043694:16845..17780 | TCONS_00058385-exon-scaffold_31-1575043694:16845..17780 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_31 | supercontig | scaffold_31:16845..17780 . |
Blast
The following BLAST results are available for this feature:
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