TCONS_00058393 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058393
Unique NameTCONS_00058393
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1254

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058393 ID=TCONS_00058393|Name=TCONS_00058393|organism=Clytia hemisphaerica|type=transcript|length=1254bp
ttggcaattaCATCAGATTGTGAGAATGGTAGAAACAAACTTTCACAAGT
CATCACAAAACATTAACCAAATTAACACGAGTACTTTACATGTGTGCAAA
TAGGATATTTTTTGATCAGATAAGTGAAACATAAACCACTTAgtggtttt
tttttaagttgtaTAAGTCTGCcgtaaggtttttaaaaatagttATGTTA
TATAAATGTTCTACATCAATGTTCTTTCAAAACAGTTTCCAAACAGTTGT
CTTCTGACCTTTGAGGGAGTAACATCTCTTAGAGCAAAGTTTTCAACCCT
GTGTGGACAAACGATTGCGGACAAACGTCTATGCGGAAAAACGAGAAAAT
TGCGGACAAGCGTCGGTTTCGGTTTCAGTCCTACTGCATAAAGCCGAAGA
CCGGTTTGGTTTCTGTTCGACAGCAAAAAACCAAACATTTTCTATTATAT
TTATACTTTTTACTATACATTTTACAATAACTACAATAATTTACTAAACg
cgttaatcacttcagtgtgaaAGCGGAAGTAtacaaaaaagatttattta
aCATTTCACTTTACAACAAACgcgttaatcacttcagtgtgaaAGCGGAA
TTATATATTAGAGGGGCCTCGGCCCCGAAGTACATTGGGCCTAGTGTACT
TTGTTGACATGGCTAGTAGGAAAAGAGACCCTCCATCTCCACTagaagat
atttcaaaaaacatcGGTAAACTTAAAGATGATTTCACACgtaggaaaaa
aatgaaagtccaTTTTCTGGAACAGATGTCTACTTCTTCTCCAAAAAATA
GTGTTGTTCAGCCTGAATCTGATCCTGTTTTTAATGAAGATGTTATAGAA
TTAGTATCTGGTTTTGACTCTAGCAGTTCTTCATCTCGACCTTGGTCAAA
CTCTGTTGCAGGTGGTGCTACCACATTTGATTCttctaataaaataaaaa
aacacgaACATTCTTTTGAAAAACCTTATAACTTAGAAACTATGAACTCC
TATATAAATAATTTTAAACTACTTTCTGCAAAAAAAGCTCATACTAAATC
CTCTGTATTGAGCTGTGAAATAGATATAACCGACATTGAGAAACTCAGTG
ATAAAGATAATTGGTCTGATAAAATAACTAAATTGCAAATTGATAAAAGA
TCTAGACTTCTTGACAGTTACTGTGAAATAAAACTGCTAAAGACTCCAAT
ATCCCACCTATTTCTCtggaaaaaatatatgaaaatctCGATCACCATGG
TGTT
Run BLAST on NCBI

protein sequence of TCONS_00058393-protein

>TCONS_00058393-protein ID=TCONS_00058393-protein|Name=TCONS_00058393-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MASRKRDPPSPLEDISKNIGKLKDDFTRRKKMKVHFLEQMSTSSPKNSVV
QPESDPVFNEDVIELVSGFDSSSSSSRPWSNSVAGGATTFDSSNKIKKHE
HSFEKPYNLETMNSYINNFKLLSAKKAHTKSSVLSCEIDITDIEKLSDKD
NWSDKITKLQIDKRSRLLDSYCEIKLLKTPISHLFLWKKYMKISITMV
Run BLAST on NCBI

transcript from alignment at scaffold_310:54139..69210+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058393 ID=TCONS_00058393|Name=TCONS_00058393|organism=Clytia hemisphaerica|type=transcript|length=15072bp|location=Sequence derived from alignment at scaffold_310:54139..69210+ (Clytia hemisphaerica)
ttggcaattaCATCAGATTGTGAGAATGGTAGAAACAAACTTTCACAAGT CATCACAAAACATTAACCAAATTAACACGAGTACTTTACATGTGTGCAAA TAGGATATTTTTTGATCAGATAAGTGAAACATAAACCACTTAgtggtttt tttttaagttgtaTAAGTCTGCcgtaaggtttttaaaaatagttATGTTA TATAAATGTTCTACATCAATGTTCTTTCAAAACAGTTTCCAAACAGTTGT CTTCTGACCTTTGAGGGAGTAACATCTCTTAGAGCAAAGTTTTCAACCCT GTGTGGACAAACGATTGCGGACAAACGTCTATGCGGAAAAACGAGAAAAT TGCGGACAAGCGTCGGTTTCGGTTTCAGTCCTACTGCATAAAGCCGAAGA CCGGTTTGGTTTCTGTTCGACAGCAAAAAACCAAACATTTTCTATTATAT TTATACTTTTTACTATACATTTTACAATAACTACAATAATTTACTAAACg cgttaatcacttcagtgtgaaAGCGGAAGTAtacaaaaaagatttattta aCATTTCACTTTACAACAAACgcgttaatcacttcagtgtgaaAGCGGAA TTATATATTAGAGGGGCCTCGGCCCCGAAGTACATTGNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTTGGAAAGTA ACAGCTTTGATGCTCTTCATGAATATCTCTCAACAAAATCATCGTTAATA AGGACATTTACTCTACTTAactatttttggacctaccccggtggaggtct tataaattaacctgtgtttgttcgttcgtccgtccttTCGTCTGtaacca acttttctcaggattgaatcataggaatcttttgatttttggtacaaagg tgcaaaatggtgatggccaaaatgtgacggagcccaattttcgaaaaaaa aaatttttggctaaatttcagccaaaaaatggctgaaaaatagggttttt tggacttagtgagAAATTGGATCATTCAATTGTTCTcgttttttgcatga aaaaagGATACCACCATAAGTAAAAgttggctcaagcagattttcataaa aaattttttttggctgaaaaaacgaatctttatctataagaatcactatt tgtAAGCATAGATCAATTTTCTTatccaaattattatttttattaaaaaa aaaaaagatgaaagtGTCACGGTGCGATCAGGGAAAAAGTTtcatcgggg ctgtgagacaggggtgttaaaatcTGACAAAAAGATAATTTAGAGGTTAC AATTTACTTTATGTCCGATAAAAAACCTTAAAAGAAGCTAGAGTTTCTTA TGTAAAAATTATATAGTTGTGAAAAATTCAGAAACCCAAACAGAGAAAGC GAGCGTATGTTAACATCTTTTGCTCATTTAATGAATAGATTTTTTATTAA TGAAGAAAGGAGCGAGANAAACAGAGAAAGCGAGCGTATGTTAACATCTT TTGCTCATTTAATGAATAGATTTTTTATTAATGAAGAAAGGAGCGAGAGA AAGATGATATTATGTTTGCAAAAAATCTTTCTCGCGGTAGCAAAAAGAAA ACTCCATCGTAGAgaattttagaaagattttcaacGAAGTTAATTTATTT TTGGTGTTATCAAGCAGCTGGTGGAGAACAGATTCTCCTTTTACTTTAGT TTTAAAAACACGTGAAGTAACAGATGAACACATTGCTATTTATTTACAAG AAGTGTTTTAAGAGATGCGAGTTGAAgtggagaaaatattttcatagtaa tttataaatttttatcatttttgttaaGAAATACACTAGATGTATAATGT TGtgtgtcttttcttttttttaacttgaaagGGACTTGAAATCATTTTAA CATTTTGCTATATTGTAGCACTACTATATAATATTGCTAATTTTTATCGT TTCAGAGCTAGATATACTTATTAAACCAAGGTACAAAATTAATAATAACA CCATACAAATTTCTGCCAACGAATCGACGAAAATTTTAAGGTTCCAGATT CAAAGAGCTCTTTGATAGAAGCAGCCGTTTCAGAGAAACTAGAAATCACC AACAACAAACGCCCCATcaacaaaattcaagaaaacatcttttgaagaaa gaagaaaagtgctagagaagaaagaagaaacctAGATCATTTNcaaaatg tatgagcgattcatagaggcccatgtgtccgcacggtggcctgcgaattt gtaaaacaatattattattattattattaTTGTTTATCTAACAAAATAAT GGGTAGAGGTAGACCAAAAGGTACACCCaataaaaataaggaattttaaa GGAAAACCACTTGAAACATCaaatgcaaaaaataatgaaaatttgattCC ATTCTCTGATTTACGGGGAAGAAGTACACCACTGGGACTgaaaaatttgg gtcaaaatGTTTGCTTTTTCAATTCTGTAACTCAAGCATTATATTCTGTT GATAGCTTCCGCGAATCTGTATTTAATCTTGATGTCGATAGCCCAATAAA ACTTGCAATCAAAGAACTTTATACCAAAATCGAATCCTCTGAAAACTTAT TGGAAACATATCAGTTTATCAAATCTATAGAATTACCACATTATGACCAT ACTCTTCGAGAACAGTTTGATGCACAAGAATGTATGCTTCATATTTTGAA TCAAGTAAATCCTCTAACAGCAGACCAGTTCGTGCCCAATGATAGTATTT TCTGTATATCATTTGCAGAATCAATTTTATGTCAAACTTGCGGTAATTTC TCTAACAAAGAGGTCACTGATAATATATGTCAAATACAGTTTCCAAACCG TTTTNTTCGTGCCCAATGATAGTATTTTCTGTATATCATTTGCAGAATCA ATTTTATGTCAAACTTGCGGTAATTTCTCTAACAAAGAGGTCACTGATAA TATATGTCAAATACAGTTTCCAAACCGTTTTAGtagaaattctattgaaa aTGCAGTTTCGAAAATGGTTAATGACCCATATGGAGAATTTCTCCAAGAA GCCTACGAGTGTTCTCACTGTCCCGTTCGTACAGTTGCCAAAAAATTCAG GACTTTATTCAATGTTTCTAATGTGTTAGTTATTCAATTAGTTATTTTCG GGTTTGACCAGGATACTTTCGTGTCTAAAAAGCTAGCCCCCAACTTAAAC GTTGAAACACAATTTGAGAATGTTCTGCTGGGAAAGCTTCATTTGCAAGC AATCATTTACCATCATGGCAATTCGTCTAACAGTGGCCATTATACTGCTG TCGTAAAATACGGAGAAACTTGGTATAGGGTTGACGATGAGAGTGTTGTA CCCATTCCGAATGTTCAGTCTCAGTATAAAGTTGATGATCGTAGTGTTCC GTACCTTTTGATGTACAAAAAAACTAGTGGAAAANCCGTATCTTttgatt tacaaaaaaattaatggAGAAATACCCACAACACCTATTGGAAACAAAAG CCATTCTGATTCTCAATATTCTCCTTCTCCAGACATAGTTAGTACTGGTA ATGAAAATCCAACTTCTAAAGTCACACATGCTAATCTTGATGCCGCTGTA GACAACCCTTTAAAATCCTTTGCAACGATAAAAAATCTCACCTCTGAAAC AATGATGAGAAATTCCCTTCTTCAAGAACTTGATAGACAAAATCGTAAAG TTACAGAAACCAGAAGCACTCCGGTTAAACCTTTTACTCCGGTTAAGCGA AAGCGAAAATTATCAACTTCTTCAAAGAAAAACGCTATGAAAGATGTACG ATATAATATGGATGAGGTCAAAAAGAGGTTGTTTAGGAGAAGTGACCAGG CTAGAAAAAGACATTTTCGGCATAACcaagatgaatttgaaaagaaacag GAGAGAAAATCtgctaaaaaaagaatgaaagaaaCAAGATGTAACCAAGa cgaatttgaaaaagaaaaggttcgAAAATCTGATCATGCTAGAAAGAAGG ACTTAAGGAATAATCAAGACGAATTTGAGAGGAAGCAAGAGAGAGAATCT GCTCAAATAAGAATGAAGAATTTAAGGGATAATCAAGacgaatttgaaaa agaaaaggttcgAAAATCTGATCATGCTAGAATGAAGAATTTAAGGGATA ATCAAGgcgaatttgaaaaagaaaaggttcgAAAATCTGATCAGGCAAGA AAGAAGAATTTAAATGATAATCAAGacgaatttgaaaaagaaaaggttcg AAAATCTGATCAGACAAGAAAGAAGGACTTAAGGAATAATCAAGACGAAT TTGAAAGGAAACAAGAGAGAGAATCTgctcaaaaaagaatgaaagaaaCC AGGGATAATCAAGacgaatttgaaaaagaaaaggttcgAAAATCTGATCA TGCTAGAATGAAGAATTTAAGGGATAATCaagatgaatttgaaaaagaaa aggtttgAAAATCTGCTCgggaaaaaatgaaagattaCCGAAGTTTTAAT ACAGCACAACAACAAAAGGagtttgaaaaagttcaaaatgcTAGTATGGT TGATCCATTAATAACTTTAACTAAAgcgtttaaaattttgaaacaaaatt ttgattctgCAATAAAAGAAGGTCCGACAAATAAGTGTCACATTTGCATT AAGTGGGAATATAAAGGAAATGGTAAGAACTTTCTCCATAAGGAATATGA AGAGTttgcgatttttgaaaaatgtgataTTTCAAATAAAGATTGTGACC CGGAAAAGAGTTATTGGATTTGCTATTCATGCGATAAAGcaataaaaaaa gatatattaccTGTTCAAGCTCAAGCTAATAATCTTCAGCTGTCAGCTCA AATACCTGAATTACAAGATTTATGTCCGATAGAAATGATGCTTGTTTCAC AAATTATCCCTTTCATGTTCATAGTTCCAAAGCACAAAGGTGGACAACAA GGTTTGAAAGGACAATGTGTCATGGTACCGGCAAATTTAGATAAAATTCA GAATATATTACCTAGAGTTTGCAGTGACGAGTTTTTGATATCACTTGCTT TGAAAAGACGACTAACAGATAAAAGTTCCGTTAATAAGCAAAACATCCGT CCCGCTTCTGTCGCTAAAGCATTAGAAAAATTAGtcgaaataaataaatt ctatgAAAATGTTGTACCAAATTCAAAATGGGAAGACGAAAGTTTGCGAT CAGATCCAGAATTGTGGAGACTTTTGACGGATAAGAATGCAAAGCCTCAG GATGATGAAAGTGATAGTGATGATAACATCGAAGGTAATGATAATGATCT TGAAAAACAAATAAGTGATAAAGGTTCCTCACAGCCAACCTTATTGTATA ACATAGACGGGGCAATGATTTCGTCAAATGAAGCTGTCGAAATTGCTCAC AGGCAGTCTCTATCATCTGAAATATCTTCTGATCAAATTGTCAATATTGC CCCCTGTGAAAATGAAATTCCTGTCTCTTTTTATTCAGAACCTGATTGGG AAGCTCTAGCTTTTCCAGGCCATAACCCCGATGCAAAGAATTATTTCAAT TCGccaagagaaagaaaaattactccAATAAAATACGCCCATGCGAGATT GAAATCTTCTGATGATAGNAATTACTCCAATAAAATACGCCCATGCGAGA TTGAAGTCTCTTGATGATAGATTTGCTTCAGGTCCACAATATATTTTCAA TGCATTACATTGGACTGAAAGTTCGAACGTTGCCAGTGCGATTAGCTTTt cacaacaaaaacattttcaaggTGATATAACTGCAGGAAGATTAAGAAAT CCTGATAACATTAAACAAATGATTAGTGAtgaccaaatttttcaaaactc tttcAAGAACATAAGAGGAACCCCTCAATGGTGTCATAATATGATGTTAG ATGTTTTAGCCAAATGCAGGGTTTTTGGAGTTAGTACCTTTTTTGTTACT TGGACAGCAGCTTTGTTTAAATGGACTAACATTGTAAAAGTTGTTGCTAC GCAATATCGCGAAAATCTAACTGATGAGGACGTAAATAAAATGGACTGGA GTGAAAAACTTAAATACTTCAAAAGGAATCCTGTTACAGTAGCTAGACAA ATTGACCATATTTTCAATAAAGTGTTTCCTAAAATGCTTATGAGCGGAAT GCATCCTATTGGACAGATTTTGAATTATGATGATCGAAGGGAGTTTCAAC ATCGAACCGGACTAGAGCACGTTCATGCACAAGTATATATTAAAGATGCT CCCCAAATCAATGAGAAAGACAGCAGTAACGATCAGGAAGTTGTTTATTT CATTGATAAATACATCACCTGCTCACTACCTGATAAAGGAGAATTTCCTA AATTACACGATTTAGTTAACACGGTTCAAAAACATCACCATACTACGACA TGTAGAAAGAAAAAGGGTTCGCGATGTAGATTTAAAGCTCCTTGGCCCCC ATGCAAAGAAACTCGAATTATTCGGGGTGAACAGATCGATAAAAATGAGT ATAAACAATGCAAAAGAGTTCTCGATAAAGTTCTTGATCAAATCAATAGC TGTAGCGCTGATCTCCAAAATGTTACTCTTGATGATTTATTGTTGTCTTG TGATCTTACCAGAAGTGAATACTTTTCTGCTTTGAATAAAGTTCAGAAAA AACTTACCGTGATTTACAAGAGAACGCCGAATGAAACCAATATTGGCCCG TACAATACTGTTATGATTAGCCTTTTACAGTCTAACATGAATATCCAGTA CGTCACAAATATGTATGCAGTTTTGGCATATATTACTTCCTATATGTGCA AACCGGAACGCAATATGAGCGAACTTATGAAAAAGGCACATAAAGAAGCA ACTGGAAAAGCTGTTAAAGATAAACTGCGTGCAATAGGAAATGTTTTCTT GACAAAGCGTGAAGTGTCAACTCACGAAGCTATTAAAAGAACACTTTCTC TTAAAATGAGAACCTCGAATATTGACACAGTGTACATTCCAACTGGACCA AAAGAGAAGCGCGTTAGAATGTTGAAAAGTCCCTCTGACCTAGCCAAACT TGAATCCGAATCAAAAAATGTGTACAAGAAGAATATGGTTGACAAGTACC AAAATCGTCCAAATAAGTTAAAACATATGTGTTATGCTGATTTTCCAACC ACATATACTTAtccaaaacaaaatgaagaCGATGAAGAACAAAATGAAAC AGATGATTAATTAGATACTCATGAAAACTCAATCAGATTACCCAAAAATA TCACATTAAAAAATGGaataggaaaaatgaaaaagagaaGTCGCCCCTGC GTGATGCGTTACCATAAAGTCAGTAAACTTAAAAATAGAGAAGAATACTT CTTGGTACTCCTCCAACTTTACATGCCCTGGGAAAATGAAGATGCTATTA AAGGAAGTTTTGCAACATTTGAGGAAAAATTCACTGAGATAAAAGATGAA ATAAtgccaaatattttaaaacatgATATTAACTTCAGCAGAAAAGATGA TATTGATATTAATGATGTGCCTATTTATGATAATTCTGATTCAGAAAATA GcagtgaagatgaagatgatttTGACTATGGTATGATTCATTCTGATTTA ATAGATTTGGATAATGAAAATGACGGCAATGATGATATAAACGTGCCTTC CTCAGTACCATTTACAACAGCTCAACGGAATCCCGATATGCCACTTGACC TATTTTACAACATGTGCTCTAACTTCAATGAAAAGCAACGAAACTTTTTC AACTACCTCTTCAAGTATGTCATCGCTCTTAAACTAGCTGAGACAAATCC ACTTCTAGAGAAACCGAATGCATTTAGACTTTTATTAAGTGGTGGGGCAG GTGTAGGAAAAAGCTTTTTGGTCAAGATATTAACTGAAcaactgaaaaag attttgaaagaacCAGGACAAAACTATGACAAAGAGCCTTCTGTTCTTGT CACTGCATCCACTGGAAAAGCTGCAGCAAATATTGATGGAACTACTCTTC ATTCTGCTTTTAAATTACCCATATACGGGAAGGGAGCTTTTTTCGTTAAG AAGAAGTTAAATGGGGATGAGAtgaacattttgagaaaaaagtacaAGTA TTTAAAAGTGTTATTTGTCGATGAAATTTCGATGATAGGAGATAAAAGTT TTAATGATTTAAATATAAGGCTGCAAGAAGTCAAAGAAAACTATGTAGAA TCTTTTGGTGGTGTATCAATATTATTCATTGGAGATTTCTTTCAACTAGT CCCTGTTGGCCAAGATTCTATTTACGAGCCTAAACCTTTCAATTATGCGT GGGAAGAGTTTTCACTTTATGAATTGGATGAGATTGTTAGACAGAGTGGG GATTCAGAATTTGCAGCTCTACTAAATAGACTACGAGAGGGTAATCACAC CACTGTTGATGTTGAAAAAATCAAGTCATTTGAACATACTGACACGACTG AATGGCCTgagaattttatgaaaatgtaTCTAACAAATCATTTGAAAGAC CAACAGAATGACATGTCCTTGAGAAGGTGTGATGATTATCGCAATAAACA TACCTCAATTGCAAAAGATGAATCAAGATCAAAAGTAACCTTGAACAAAA ATGTCCCGATCAATGAAACTGCAGGACTACCAAAAGAAGTGACATTTTGT GTTGGAGCCAGAGTCATGCTAACCATTAACAAAGATATAGAGGACAAATT GGTAAATGGATCAACAGGGATTGTAAAATATATTCAAGGCATTAGAGATA ACAAACCATCAGGATTGATACTGGTTCAATTTGACAACCCTTCCGCAGGT AACAAATTAAAAGACTCTAGATATCGGGGTGAATTAAAAACGTGTGTTCC AATTTTGCCTGAAACTTTGACATTTAGGATAAAAGATAATATTTCAGTAA CACGCAAGCAATTTCCATTGATTGTTGCATTTGCAACTACCATTCATAAA GCGCAAGGAAGTACATTGGAATACGCCAGTGGAGATCTAGATCAATCGAC AAGAAGTGGTAAAGGATTAGCACCAGTTGGACCAGGATTACTTTACACTT GTCTTTCACGTGCAACTTCGAGTGAAAGGATTTGCTTATTGAATTTCAAT CCTGAGAAACATGTTGTTGTCAATAAAAAGGCCAAAGTAGCAAATAAGGT CCTATCAATATTACATCCATTGGAAGAAATGAAAGACGCGACTTTATGTT TATTTAACATAAGATCATGGAACTTACATATTGAACATTTTCTATCAGAT AGTATTCACACATCAAGATGTTGCTTACTATGTTTTACAGAGACTGGCAC TAACATTAGAAAGAGATTAGATGACAATCCAGAACTACAAACTTGGACAA CCATCCATAAAAAAACTGAACATGGTTTGGCTATCAGTTATGATACGACA CAAGTGAAAATCATGAAGAGGTTGGACACTGTAAGTGATATTGAACTGCT TCCAGTTTTGGTCAGTTTAAACAACTCACTATTTTTCATCGTATTGGTTT ACAGACCTCCAACTAGCTCTATTCCTTTATTCATACAATCGCTTCAGATT GAACTTGATCAACTTCGAGAACAATTCGATGCAGCAGAGTACTCAACTCT CATTCTTGGCGATTTCAATTTGCATGATAACAAAGATGACCTAAATGAAG TCTTGCCACCAGACATTTTTCATCAACGCTGTCAATACCCGACCCACATC GACGGAAATTTGCAACAACCCTGCTAAGTGGATGCCATCACCTTACAGCG AtcacttttctatttttgttgATGTCATTCCAAAAtcttagattttcttt ttcataattgTGATTTTAATTATAGTATATAGATACTGTATTAATTAAGA TAGgagtgtatttttatttttgttatttgttaaattaaaaaatgtatctA TGAAGTCTGTTAATAGTATACTGTTTATTGAATTTGTGAATAGCTTGTTT CTGCCTATCCCCTTCCCTATCCTCTATCCCGACACTCTCCCCGATCtatg atgaaaagaaaaactgaaaattacaaCGTTATTTTTACTTCAGTTTTATt tctgaatgattgattaatgtGTCAATATAATTTGGTCCGAAACATTCTTT GATTTTTAgcacaaaattgaaaatatgagctgagaacaatagattttaaa tgtctaatttaaagtctatttcaaattatctggcgtgtgccacccttaag ggtaggttttccGAGATCTTCTGAGATTTCCTTGTGATTGAATCATTgaa cttttcaatattttttttgtaaattagcATCATAGACAAAAGAAAGTTAA AGTAGGTTTTCTTTGAATATCTTTCCTGTGCATTTGAAACTGACCctaat ttgatctttttttatagaaactttagtaaaaaacagtttttcgtttcgga tcatttgatttgatttgtttaatattttaatCTTGTTTGTGGAGCTACAA ATGTTTGATTATATCTTACCCCAATTACAGTATTGCATAATTATATATAA TTAGCActataattaatttttgaaatatttaaattcACGATATTGATTTT ACTGCTCaataacattaaaaaaaaattaaaagcgtGCCCATTTTTCTGTT AGGCTAGTAACAAAAATTGGTTCTATGAATGATTTTTAAATTGAAGACAC TAGTCTTGAATTTTGACCTTGGATTTTTTAAttagttaaaaaaaatcttt acatCAATCATTTAATTTAATATAAGAATTTACATCGATCAAGCATTTCC AAatactgtacacgttttttttttactagaacacctaaaatttggctgag cctggatttgcttattttttccggggggggggggggcagtcagtcaaatt gaccgacgggtatgtgcggcggttaagggtatgtttttcaaaatatcaga aatgcactgtaagggtggacttttgataaatgcactgtaagggtggaaat ttcagcaaatctgggaaaagttgcaaatttttgctcgaaaatgttgattt tttttgctctaaaagagcttaaaatttgaaaaaatgcactgcaaGGGTAC GAATTtaaccgatttttttctgcactgtaagggtgcgattctaaaagagt attttttcgccgcacataccgtcagttggtaaacccactgccccccggGT TATttatttagcaattttcagcaattttcagcctaaaatgttcttaaatg cgttcttaatttttcagactactctaaatcgacaacatcatgcaaaataa agaacacttaaaattggtacaatttggataatatttgactctcgatttgg gttaaaactgcttgaaaagaggaaaatattgtagtttcttgtcatttttt ttccaaactgggGCTGTGCATgttcttaggatgttcttaattttttgacg aatttcagcctcaatgttcttataaactgggttctaataaaaaaaacgtg tagtccgTTCGTTTTGGGACGTAACCAGAAACTCGAACAGAAAGATCTTC GATTTACGTAACATAACAGTTTTGTTTTTACGCAATTTATCTTTCAATTA TCCAATAATTTTCGCTATGACACACGTGTCTCTTCTTCCGCATTTTGACC TTTGctcttttttaaaaagtgtgCAACATTAAGCAGCTGGGCCActgtaa cttttttttatttgcaaTTTCATACAGTTACATAAGACACGTAACTTTTT TGTAACTTTACCCTTGTGTTCCATTGTAACGTTTCAATTTAAAGATTACG CAACATAAAATACGTATATCTTCTTCTTCGGCATTTCGACCTTTACTCTC TTTTCAAGTTATGCAATATAGAACAGGTGGACCAATGTCTATTATCTTGT TGTActtgtgtgttttttttcatagtTATGCAACATCTAGCCTACAAGTG AGAAAACACATGCGtcttcttttcaatagaaatgGTGATTGTGCTTTTTC TTTTgtgctttttctttttgaaaaataatttatttaatttgtaTGTTCTC TTTGCAATAACAAAAGGAATCATTGCATAAATTAACTTTAATAAAAGAAC CACGCTATTTTTACGAATAGATAATGATATGGACTGCGAGTGACTCTTTT TTGTTTCAGttattaaaaaacttttcagaAGGGTGGAAGAACCTGGAGTA GATGGACGTAgttcaaattttggaaaaatatggttTCCTAAATCTTTTTG TATTGTTGTTGATTGTTCTTAGTAAATTATTTAAACTTATTAAATTTGAC TACTAAGCTATCTATCATATTTTAGATTAATAGAAATAAATAATGTATTC AAAACGAAAGGCAGAACAAAGTCCTAGTGCAGGCAAAACACCACCAAAGA GAAATTTGGCTTTACAATTTCATAGTCCAATATGATCATCCGTTGATATG ACAGGATATGTTGCCCACGTTGGAGAAATTATCACCGCCTCTGAATCCGG AAACCAGTATATCGACGTTAAGATTCAAACATCGGACGACCAATACCGAA CGGTACGAGTGATGCTCCTTGGTCTACCATGTCAAACAATTTTTAGAGAC AACTATGGTAAAACCGTtaaattgaaaaacattaaaGTCGATTCGAATGC AAGCACTGGTAAcgaaaccttttttttcaattttaaaacggGAAGTAAAA TTTCAGTTGAAAAACACGACCCGGACTTTCGATTTAAAAAGCTTACAACG ACCAAAATTTCAGGCATTACAATTGAATCCAATAATGTCAATGTTGTGGC TGCACTTTATTGGAACGAAAAAGAATCGAAATCGCAATTCGGCAAGACCG TACGACACGGGGTGCTTGTAGATGAGACTGGACAAATCAGGTTTTCAGTT TGGCGCCAAAATTTTATTACCACtataaaatagaaaacaaattaTGTTTT CACTGATCTAACCACAAAGATGTTTTATGGTTTAAAGCTTGAGACGACAT ACCATTCCGCAATCCAGCCTTCTGATGTCAACATAGATTTCCCCGTCCCA GATATGACTGTCCATTCAACTACAGTTCCAAGTAATGTGAAAAGTCATGA TTATCCGGACATCGATTCTGTTCAACTTCGAAAAGTGCGTCTATGTAATC AAGCCAATTGCGACTATGAAATTGCTGTTGAAGATTTTAACAGCAAATTC GTTCGATGCGTTAACCCAACATGTCAACGTCTCCAACAGGTGAAGCGGTT GAAAACAGTAATTCAAGGAACAATTGAATTTTCTATAAACCAAAATCAAA CATCTTTATTTTGTGACAGTGAAGTacttaaatctttttttaaagatgTT TACAACGACAATCCAGAAAGTTTGGAAGAGGAAATTTTAGTGCTTGAAAA TATCAGGATTAAGTACAATTCcaaagaattgaaattgatCGAAATTACTA AACTTAACACGAAAAGCGCTGAACCATGTCTCATGTCCGAAAAAATGGAA TTGGTTCAACATTCaccatcagatgaaaataacaaTGACTGAATTGAATA TTTTCACATGCTACCTTTTCTTCTTGTAAATTCTTATTGTTTtgcattca attgatttttGTGACATTTGACATTTTGACCTTAGTGTGTGATTTGTGTG ATGATTTACTTGATTTTCAGACAATTGACTTTTggatgatatgttttgat atttataaataattaaaagaCTATTTAAAAGACTAGGAAACGATTTACGT GCTACTCCTTTGCTACCGTTTATCATACATTGCCTTGTAAATTCTTATTG TTTTGGGGTAATACTAAAATacgcaaccagccacaaccagccacaaccag ccacaaccagcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ACAACCAGCCACAAcaacccacaaccacccagaaaaaggtacaaccaccc aggaaaaaaggtacaaccagccacaaccacccagaaaaagctacaaccac ccagaaaaaggtacaaccacccaggaaaaggtacaaccagccaggaaaaa ggtacaaccggccacaaccacccagaaaaaggtacaatcagccagaaaaa aggtacaaccagccacaaccacccagaaaaaggtacaaccacccaggaaa aaaggtacaaccagccacaaccacccagaaaaaggtacaaccggCCACAA CCActcagaaaaaggtacaaccagccataaaaaagatacaatcagccaca accacccaggaaaaggtacaaccactcaggaaaaggtacaaccagaaGTA CATTGGGCCTAGTGTACTTTGTTGACATGGCTAGTAGGAAAAGAGACCCT CCATCTCCACTagaagatatttcaaaaaacatcGGTAAACTTAAAGATGA TTTCACACgtaggaaaaaaatgaaagtccaTTTTCTGGAACAGATGTCTA CTTCTTCTCCAAAAAATAGTGTTGTTCAGCCTGAATCTGATCCTGTTTTT AATGAAGATGTTATAGAATTAGTATCTGGTTTTGACTCTAGCAGTTCTTC ATCTCGACCTTGGTCAAACTCTGTTGCAGGTGGTGCTACCACATTTGATT CttctaataaaataaaaaaacacgaACATTCTTTTGAAAAACCTTATAAC TTAGAAACTATGAACTCCTATATAAATAATTTTAAACTACTTTCTGCAAA AAAAGCTCATACTAAATCCTCTGTATTGAGCTGTGAAATAGATATAACCG ACATTGAGAAACTCAGTGATAAAGATAATTGGTCTGATAAAATAACTAAA TTGCAAATTGATAAAAGATCTAGACTTCTTGACAGTTACTGTGAAATAAA ACTGCTAAAGACTCCAATATCCCACCTATTTCTCtggaaaaaatatatga aaatctCGATCACCATGGTGTT

Coding sequence (CDS) from alignment at scaffold_310:54139..69210+

>TCONS_00058393 ID=TCONS_00058393|Name=TCONS_00058393|organism=Clytia hemisphaerica|type=CDS|length=594bp|location=Sequence derived from alignment at scaffold_310:54139..69210+ (Clytia hemisphaerica)
ATGGCTAGTAGGAAAAGAGACCCTCCATCTCCACTagaagatatttcaaa
aaacatcGGTAAACTTAAAGATGATTTCACACgtaggaaaaaaatgaaag
tccaTTTTCTGGAACAGATGTCTACTTCTTCTCCAAAAAATAGTGTTGTT
CAGCCTGAATCTGATCCTGTTTTTAATGAAGATGTTATAGAATTAGTATC
TGGTTTTGACTCTAGCAGTTCTTCATCTCGACCTTGGTCAAACTCTGTTG
CAGGTGGTGCTACCACATTTGATTCttctaataaaataaaaaaacacgaA
CATTCTTTTGAAAAACCTTATAACTTAGAAACTATGAACTCCTATATAAA
TAATTTTAAACTACTTTCTGCAAAAAAAGCTCATACTAAATCCTCTGTAT
TGAGCTGTGAAATAGATATAACCGACATTGAGAAACTCAGTGATAAAGAT
AATTGGTCTGATAAAATAACTAAATTGCAAATTGATAAAAGATCTAGACT
TCTTGACAGTTACTGTGAAATAAAACTGCTAAAGACTCCAATATCCCACC
TATTTCTCtggaaaaaatatatgaaaatctCGATCACCATGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036783XLOC_036783Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058393-proteinTCONS_00058393-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058393-exon-scaffold_310-1491911889:54139..54771TCONS_00058393-exon-scaffold_310-1491911889:54139..54771Clytia hemisphaericaexon
TCONS_00058393-exon-scaffold_310-1510915933:54139..54771TCONS_00058393-exon-scaffold_310-1510915933:54139..54771Clytia hemisphaericaexon
TCONS_00058393-exon-scaffold_310-1575043694:54139..54771TCONS_00058393-exon-scaffold_310-1575043694:54139..54771Clytia hemisphaericaexon
TCONS_00058393-exon-scaffold_310-1491911889:68590..69210TCONS_00058393-exon-scaffold_310-1491911889:68590..69210Clytia hemisphaericaexon
TCONS_00058393-exon-scaffold_310-1510915933:68590..69210TCONS_00058393-exon-scaffold_310-1510915933:68590..69210Clytia hemisphaericaexon
TCONS_00058393-exon-scaffold_310-1575043694:68590..69210TCONS_00058393-exon-scaffold_310-1575043694:68590..69210Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_310supercontigscaffold_310:54139..69210 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.9506 1.4898 1.26852 1.09062 2.06026 1.55568 2.57524 3.10557 2.63203 2.3034 3.26761 4.06989 4.92224 5.53387 3.70136 3.20667 5.37757 4.70204 10.5021 9.93224 3.74202 4.37094 3.23089 2.18523 6.59756 7.84004 3.39831 2.43441 2.52468 1.84281
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058393 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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