TCONS_00058462 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058462
Unique NameTCONS_00058462
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1734

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058462 ID=TCONS_00058462|Name=TCONS_00058462|organism=Clytia hemisphaerica|type=transcript|length=1734bp
GTATTTTTCAgcattatataaaaaataaataaaaaacaaaaaaatatggt
CAAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCATGCGC
GAGTGATGTTCGAATTGGCAGGAGCTGaatatgaatacaaaacatATGTG
TTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCCCAACCTGTTCCC
ACTTTCACAAGTTCCAACATTAGAAGTCGATGGTCAAGTTATTACACAGT
CATATGCCATCAATAGATACTTAGCACATGAGTTTGGATTTTATGGTGAT
TCGAATACTGAGAGAGTGCAAATTGATCAAGTGGTAGAAACACTTGTTGA
AATGTTCGCAGAAATGGCTCAGTTGATTTACATGGAACCAGATTTAGAGA
AAAAGAAAAGTGCATTGAGTGAATTCgctgaaaaattccaaaaacatTTG
AATTTCATCGAAAGATTTTTGAAGAACAATCCATCAGGTTATTTGGTTGG
AAATAAGATCACTTTAGCAGATATTTGTCTATTCGTTTTCGGCGACATTG
TCACTTTCCATTATCCAACCTTTTTTGATAACCAAccagaaatcaaaaaa
ttcatcAGCCGTTTTCATGAAATTGAACAAGTCAAAAATTATGTGGAAAA
GAAACGAACCCATAAAATGCATGTTTATTGAGAAAGAAAGTGTCAATCGT
AACCATAGAAACGGACTTAACCCAAGAAGGGATTCTGGGCAATTTAGAGA
GAACTCTTATGTTGTTTCTCAAGTGCTGGTAactagatacatagatacac
tttttatttaaaatacaTTCACAAAAAGGCTTACGTACTTTTATTTGCAA
CatcattttttaacattttgtaatttttttggtcaaatATTTCTTATAGG
TTTTTATTtagtagaaaaaagaaaatacattaattttaaatttttcttat
gtGTTCCCATGATGAATATAATTTGGGACTGTTGTTGTGTAATTTCCTAA
GATTTTGGGTGTTTTAATGTCCATAGACTAAAAAGTTATAAACTTGTTCt
caaagctttatgttcttataagaaatgtATATGCAAGATACCGCAGTCTT
TGTGCCTTACAACACTGATAGTAGAACATCGAATTAAAAAGTAGGCTACG
TCAACCTGATCTTAAAAACTTCGTAGAACgttttagaaaattaaaaaagt
aaagaatCATTTGATTATGAGAGACCTTAATTGAAAACTTACATATCTTT
CAAGAATAATAATGAAAACTTATAGATACAGTAGTATTAGgcctttttat
aaattattttgagtgcaacgatagcctcgttttgaaaccattaccaagct
TATTAAATCCCTTCGTCCCTTGATTCTTCAAATGTTACTTTTAAAGATAG
AGAAAACTTCTTGAGGAACTCAAAATGAACCTGGCAATactttgaaaacg
aggtaagcgatGAGTCGTCGAGTCGTCGATTAACCAATTTTAGCATCACG
TCAAATCAAATTGATTTATAAACGCATTATACACATAAATACCCAGCTGT
TACTGTTTCAATATGAACCTTCATGATGTATGGACATTGGTGAAAGTTAG
ATGGACATTAACCCTATtcgaactagggggggggggggctctttctgttc
ggaggtcaaactattggtaatagctcctgaaataatagagcttttgcctt
gaaattttctgtaaattcctaacttttattttgc
Run BLAST on NCBI

protein sequence of TCONS_00058462-protein

>TCONS_00058462-protein ID=TCONS_00058462-protein|Name=TCONS_00058462-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MVKYILHYFPVVGRAEHARVMFELAGAEYEYKTYVFGGEWNEAKKNHPNL
FPLSQVPTLEVDGQVITQSYAINRYLAHEFGFYGDSNTERVQIDQVVETL
VEMFAEMAQLIYMEPDLEKKKSALSEFAEKFQKHLNFIERFLKNNPSGYL
VGNKITLADICLFVFGDIVTFHYPTFFDNQPEIKKFISRFHEIEQVKNYV
EKKRTHKMHVY
Run BLAST on NCBI

transcript from alignment at scaffold_311:703794..711491+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058462 ID=TCONS_00058462|Name=TCONS_00058462|organism=Clytia hemisphaerica|type=transcript|length=7698bp|location=Sequence derived from alignment at scaffold_311:703794..711491+ (Clytia hemisphaerica)
GTATTTTTCAgcattatataaaaaataaataaaaaacaaaaaaatatggt
CAAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCATGCGC
GAGTGATGTTCGAATTGGCAGGAGCTGaatatgaatacaaaacatATGTG
TTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCGTTAGTGATTTCA
TCTTTTTGCCGCACAAGATTTTTCATGAGAATGATGTTTGTTcgtttcat
catgaatattctgaACTTTTTGAGTAGAATCATCCTAAATTacacatttt
attttataagaacatccaaaatttttgaagcctttttaACTTTAAGTTCT
TAAATGAGTTTTAAGACTAAAAATGTATTATTTCCACAATTTTTCGAGTA
TTTTCGTCCATTTTGctaagaaattgagtgttttagggtctacaaagcct
taaaatgttcttaacttgttctttagcaatatgttcttatatagtttgtt
cttataaaaaacggtGTATTCTAATGATATTCTTAGTTAGGATCCAAACT
CAACCAATAAAAACATGTAATACGCATctgaagcataaaatggcattttt
gtgaatgTATTGCGAGTCCTACTGTGAATTCGATTTGGAAGCATTgcaga
ttttgaaagttttgcagaaattttcgcgagcataaactttcgcaaatcgC
CTCTTTAAATATATTcgaagacatttactttcgcgcaaaaggccaaaatt
cgtgGAAATCgagaaagtttctgctcgcgaaagtttgtactgAAGTACAG
GcgaaataataatgataatgtCAATCAGGCCCTTCAAAATAAACCAATTA
TTATTCCGTAGGCGACAGCAAAAATCACTTGATATTTCTTTTAAACTTAC
AGCCAACCTGTTCCCACTTTCACAAGTTCCAACATTAGAAGTCGATGGTC
AAGTTATTACACAGTCATATGCCATCAATAGATACTTAGCACATGAGTTT
GGATTTTATGGTGATTCGAATACTGAGAGAGTGCAAATTGATCAAGTGGT
AGAAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGTTGATTTACATGG
AACCAGATTTAGAGAAAAAGGTGTGAATGTTACTTTATTCTGACCCGTTC
AGTNGTAAGCGAATGGTAGGAGATATGTTAAATTATGTCTTTTATAGTTG
TAGCAGACTCTGTTTCTGATGTATTTTAATTGCTATAGAATACGTTAGTC
AGGTAGtgttatttttacaaattttgatcttGAAGCTAAAAGAGGCAACT
TTTTCATATTTGGTGGGCTCACAAATCCATTTAATTaccttgaaaagaag
aaaaatcttttctatCTGAGTTCTAGTTTAGAAGCCCGATTTTCCGCCCT
ACCAACTGAATATTAGAGTAGTCGAAAagtgagtagaaagttttatttca
caattagaataggaagggcgaaaagtgggccatCCAAACCATACaagttc
ttttataaaaacatccaaaattttttaatccttcggatgttcttaacttt
ttttaagcctaaaaatgttcatattttcaCCATCATGTTTTTGGACATTT
CCCTAAGAGATCATTTTGTATAAAGTCCACAAAGCCTGAAagtattctta
acttgttcttaatattttggccatcaaagccttctgttcttatataattt
gctCTTATTAAGAAAACGTGTAGCTAATGTATGAACAGGATATTATGTTG
ATTATTCTGTATTTTTCAgcattatataaaaaataaataaaaaacaaaaa
aatatggtCAAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGA
GCATGCGCGAGTGATGTTCGAATTGGCAGGAGCTGaatatgaatacaaaa
catATGTGTTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCGTTAG
TGATTTCATCTTTTTGCCTCACAAGATTTTTCATGAGAATGATGTTTGTT
cgtttcatcatgaatattctgaACTTTTTGAGTAGAATCATCCTAAATTa
cacattttattttataagaacatccaaaatttttgaagcctttttaACTT
TAAGTTCTTAAATGAGTTTTAAGACTAAAAATGTATTATTTCCACAATTT
TTCGAGTATTTTCGTCCATTTTGctaagaaattgagtgttttagggtcta
caaagccttaaaatgttcttaacttgttctttagcaatatgttcttatat
agtttgttcttataaaaaacggtGTATTCTAATGATATTCTTAGTTAGGA
TCCAAACTCAACCAATAAAAACATGTAATACGCATctgaagcataaaatg
gcatttttgtgaatgTATTGCGAGTCCTACTGTGAATTCGATTTGGAAGC
ATTgcagattttgaaagttttgcagaaattttcgcgagcataaactttcg
caaatcgCCTCTTTAAATATATTcgaagacatttactttcgcgcaaaagg
ccaaaattcgtgGAAATCgagaaagtttctgctcgcgaaagtttgtactg
AAGTACAGGcgaaataataatgataatgtCAATCAGGCCCTTCAAAATAA
ACCAATTATTATTCCGTAGGCGACAGCAAAAATCACTTGATATTTCTTTT
AAACTTACAGCCAACCTGTTCCCACTTTCACAAGTTCCAACATTAGAAGT
CGATGGTCAAGTTATTACACAGTCATATGCCATCAATAGATACTTAGCAC
ATGAGTTTGGATTTTATGGTGATTCGAATACTGAGAGAGTGCAAATTGAT
CAAGTGGTAGAAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGTTGAT
TTACATGGAACCAGATTTAGAGAAAAAGGTGTGAATGTTACTTTATTCTG
ACCCGTTCAGttgcaatgggcttttccagaaataaattttacccccactg
tcgaggatattaatttttcgaagtattgaaccccctggatatcctacttt
attagtaaagacatCCACTCTtgaaaatatgctcaaccccctggatatcc
tctcttataaggATGCTTACCCCTTGATATCGtcttttttacttgaaaag
aaaCTCTACCTCacggatatccgctcccttgtagatatttaaccccctga
atatccgatatcctcaacggGGGCacggatttttttctggataaGTCCAA
TCTTGGCACGAGCACTTTCAAATTCCTTGTCGGGTTTATAATATTAAAGC
TTGGAGAGGGGGGTTGGTACTTCGACAAAACAGGTGATGGGTATGTACGA
TTAAGGTAACCTTTTTCATATCTCcaaaagtccctcaaagggatAAAAAT
TAATAGGTTATCgttttacttcgaataaacgcccctccaaATAAACCCCt
tggaggggcgtttatttgatcCAGGTAGCAGTGAGGAAGtataatatgaa
aaaaatctaattttcgcATATTTACGCATATTATTCTCttcctttccaaa
aaaaagcaAGCTTGAGTCATAATTTACACTTCTAAAATGGATAATGCATT
TAAGAGAGGGACCTGCCTACGAGAGAGTTGCagaacattttattttattt
attttataaaacattacctgtttctattgaaaaatgATGGTTCTTCTAAT
TGGTAGTAAgtggaaaaaagcaaaaatcagaggataaaatttgatgaaag
atAACGAAAGACTTGTTAACAAATAcccaaaacatatttttatctGAAAT
TTATCATGTTAACAGTTTGATTGAAAAACGACAAATGAAGTGCTTCATGT
TGAGGCGacgattttctgaattttagaaGGATTTTCTTGTGAATTGGGAA
GTCTgtttctttgtttacatttttctatcTTCCTGTTTCTGTTTTGAAGA
AATCAAACCTTCCTAAAACAGCAGATCTTCCGAATGAGGAAGAATTCTCT
ATCTTCCCGTTTGAGTGCCGAAATATTTTCGAAACCTAATCGGGAAAATC
TTCCCGTTCGCTATCCTGAATAAATTACTCTTAACAGATAGTTACATACC
ATCGTGCAAAGTAAACACGAgtgttggatttttttttctcattgatCCAA
CcttacgagaaaaaaaatctacagAAACTTGGTAAATGAGTCCCTGACTC
GAGTCGCATCCATGAAAATCTTATTGAATTTGTATATGGATTGCATTTCT
TGAAAGTGAGATAAAGTAAATATCTATTGGCTGTGTCAACCAATATATCC
CGTACTTAATTTATGACCAAAAACTGTCAATCTTTTCTTTGTAGTAGTAT
ATTTTGAATTAGCTTCCATCTCAACTACTTGTTTTTCCCCATGCAGTTTA
AAtattaggcgaaattttcgacttaaaAGTATCGTCTTGTTTACTTTTAG
AAAAGTGCATTGAGTGAATTCgctgaaaaattccaaaaacatTTGAATTT
CATCGAAAGATTTTTGAAGAACAATCCATCAGGTTATTTGGTTGGAAATA
AGGTATGtcttacattttttgaaaataaaagaatttttgtATTTCTTGGC
TTACATGATTTTAATCGATCGGTCAGTTGGTTAGACGGGGCTAAACGATT
CGTCTTTAAAGAAACCCCTTTCTCACATCCCCGAAAGAACTTTTTCCcaa
agtggggataaaaatatctaGCGAAATCACAATGGGTAtatcattctatc
tttctaAGCTAAAAAATCCTTGTCCCACAGGAAATTTTGACCTAATTTTC
CAGTCGGACGGGGGTCCCACCGGTtctgtgacacaagggtgtTTCACCCA
AGAGAGAAAATTGAGGACGTTCATCTAACGGTATTATTGAAGCGTTTGAT
GAACATTATTCTAGCTTTGTAGTAAAGTACTTATACCACTCTTCCTCTAT
GGATTTCCCCACTTACGTTTGATCCCTCTCTTAAACCCTATTAACCCcaa
ccttttttatttttgtagccccagggggggtagaatctacctcgattatt
tttgatctaatAGAGCTATGACCATGAAAATTGGTACAGATATTCTCCAT
CATGACACAAActttcagaaagaaaaaaaatttgacttccacctgtcgga
aaaaagcaaaactatatggtttacaaaaatgtctctCACAGTCGAAGCAA
TAAAGATATtgagattctgtttgaagattctgaaagataaaaggttcttc
tttaacataattgccggttttgtaTTTCCCATTAAAACTTTATGCTGAAA
ATCTATGCTGAgaatgagtaaaattttcaaaatttgatgacgtcataaat
aatgacgtcatcattttcatgATGTCATAAATGTCaaagattttttaagt
tttttgaaatcaaattgttaatacctatcacgtgtcaaaatttgaatatg
attggATCAATACTTCAGAAATTAtcgcaattttaaaattttgagtttta
agcgattttagcttggtttcacaataaagtcatgaGAGCTGACCTAGAAG
ACATATGACCCTAAAAATTTACACAattactcttaataagattttattaa
aagtcaaaaagtttcaagtcgtttcaaaatttttactccgaaatatacac
aaaagaacacaagtgtggtagattctacccccctggggctaatagggtta
atagaccttttcataaattacgtcactgacatcacttgcctcgttttaaa
attatttgcaTGGTGATTTACTCTAAGCGGATTTTATTGAATTAAACTAC
tatctattcataaaaaaattatttaatgtctcaaggtaTATATgtccgtg
acgtaatttatgaaaaggtcagAGAAGtaccaagtaccattttgaacGGG
TTTTGCATTAAGTACAGAGTCTTTGGTATAAGCCGACCGGGGAGTgcata
gtttctaccccctaTATTTAggggggtcttgggttttgacgaaccaaaag
caagggggaTGTTAAAAGTTGGACTTTCCTAATGAGGGGTTGCCAGTTAA
GTAGGGgtcttcttacctaagggggagggggtcttcttagataaggggaa
attttctttgaattatgactcttgtacaatcgtttcatttaaactgattt
tctaagggaagtgtcaaattttaaatgaatttcctaaggggggttagcac
ttaagggggggggggtcctcttacctaagggggagggggtcttcttagat
aaggggaaattttctttgaattatgactcttgtacaatcgtttcatttaa
actgattttctaagggaagtgtcaaattttaaatgaatttcctaaggggg
gttagcacttaagggggggggggtcctcttacctaaggggggatcttgac
ccctctagaaactatgtcggagtgaacccatgaccctgtaCACCTTAACT
GAATGCTCAACCTTTACACTACTGGTCGTTGACGTGGTACTACATACCTA
CTTTTACTTTTATTCATTTAGATCACTTTAGCAGATATTTGTCTATTCGT
TTTCGGCGACATTGTCACTTTCCATTATCCAACCTTTTTTGATAACCAAc
cagaaatcaaaaaattcatcAGCCGTTTTCATGAAATTGAACAAGTCAAA
AATTATGTGGAAAAGAAACGAACCCATAAAATGCATGTTTATTGAGAAAG
AAAGTGTCAATCGTAACCATAGAAACGGACTTAACCCAAGAAGGGATTCT
GGGCAATTTAGAGAGAACTCTTATGTTGTTTCTCAAGTGCTGGTAactag
atacatagatacactttttatttaaaatacaTTCACAAAAAGGCTTACGT
ACTTTTATTTGCAACatcattttttaacattttgtaatttttttggtcaa
atATTTCTTATAGGTTTTTATTtagtagaaaaaagaaaatacattaattt
taaatttttcttatgtGTTCCCATGATGAATATAATTTGGGACTGTTGTT
GTGTAATTTCCTAAGATTTTGGGTGTTTTAATGTCCATAGACTAAAAAGT
TATAAACTTGTTCtcaaagctttatgttcttataagaaatgtATATGCAA
GATACCGCAGTCTTTGTGCCTTACAACACTGATAGTAGAACATCGAATTA
AAAAGTAGGCTACGTCAACCTGATCTTAAAAACTTCGTAGAACgttttag
aaaattaaaaaagtaaagaatCATTTGATTATGAGAGACCTTAATTGAAA
ACTTACATATCTTTCAAGAATAATAATGAAAACTTATAGATACAGTAGTA
TTAGgcctttttataaattattttgagtgcaacgatagcctcgttttgaa
accattaccaagctTATTAAATCCCTTCGTCCCTTGATTCTTCAAATGTT
ACTTTTAAAGATAGAGAAAACTTCTTGAGGAACTCAAAATGAACCTGGCA
ATactttgaaaacgaggtaagcgatGAGTCGTCGAGTCGTCGATTAACCA
ATTTTAGCATCACGTCAAATCAAATTGATTTATAAACGCATTATACACAT
AAATACCCAGCTGTTACTGTTTCAATATGAACCTTCATGATGTATGGACA
TTGGTGAAAGTTAGATGGACATTAACCCTATtcgaactaggggggggggg
ggctctttctgttcggaggtcaaactattggtaatagctcctgaaataat
agagcttttgccttgaaattttctgtaaattcctaacttttattttgc

Coding sequence (CDS) from alignment at scaffold_311:703794..711491+

>TCONS_00058462 ID=TCONS_00058462|Name=TCONS_00058462|organism=Clytia hemisphaerica|type=CDS|length=3180bp|location=Sequence derived from alignment at scaffold_311:703794..711491+ (Clytia hemisphaerica)
atggtCAAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCA
TGCGCGAGTGATGTTCGAATTGGCAGGAGCTGaatatgaatacaaaacat
ATGTGTTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCCCAACCTG
TTCCCACTTTCACAAGTTCCAACATTAGAAGTCGATGGTCAAGTTATTAC
ACAGTCATATGCCATCAATAGATACTTAGCACATGAGTTTGGATTTTATG
GTGATTCGAATACTGAGAGAGTGCAAATTGATCAAGTGGTAGAAACACTT
GTTGAAATGTTCGCAGAAATGGCTCAGTTGATTTACATGGAACCAGATTT
AGAGAAAAAGAAAAGTGCATTGAGTGAATTCgctgaaaaattccaaaaac
atTTGAATTTCATCGAAAGATTTTTGAAGAACAATCCATCAGGTTATTTG
GTTGGAAATAAGATCACTTTAGCAGATATTTGTCTATTCGTTTTCGGCGA
CATTGTCACTTTCCATTATCCAACCTTTTTTGATAACCAAccagaaatca
aaaaattcatcAGCCGTTTTCATGAAATTGAACAAGTCAAAAATTATGTG
GAAAAGAAACGAACCCATAAAATGCATGTTTATTGAatggtCAAATACAT
ACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCATGCGCGAGTGATGT
TCGAATTGGCAGGAGCTGaatatgaatacaaaacatATGTGTTCGGTGGT
GAATGGAATGAAGCCAAGAAAAATCATCCCAACCTGTTCCCACTTTCACA
AGTTCCAACATTAGAAGTCGATGGTCAAGTTATTACACAGTCATATGCCA
TCAATAGATACTTAGCACATGAGTTTGGATTTTATGGTGATTCGAATACT
GAGAGAGTGCAAATTGATCAAGTGGTAGAAACACTTGTTGAAATGTTCGC
AGAAATGGCTCAGTTGATTTACATGGAACCAGATTTAGAGAAAAAGAAAA
GTGCATTGAGTGAATTCgctgaaaaattccaaaaacatTTGAATTTCATC
GAAAGATTTTTGAAGAACAATCCATCAGGTTATTTGGTTGGAAATAAGAT
CACTTTAGCAGATATTTGTCTATTCGTTTTCGGCGACATTGTCACTTTCC
ATTATCCAACCTTTTTTGATAACCAAccagaaatcaaaaaattcatcAGC
CGTTTTCATGAAATTGAACAAGTCAAAAATTATGTGGAAAAGAAACGAAC
CCATAAAATGCATGTTTATTGAatggtCAAATACATACTTCATTATTTCC
CAGTGGTTGGACGAGCTGAGCATGCGCGAGTGATGTTCGAATTGGCAGGA
GCTGaatatgaatacaaaacatATGTGTTCGGTGGTGAATGGAATGAAGC
CAAGAAAAATCATCCCAACCTGTTCCCACTTTCACAAGTTCCAACATTAG
AAGTCGATGGTCAAGTTATTACACAGTCATATGCCATCAATAGATACTTA
GCACATGAGTTTGGATTTTATGGTGATTCGAATACTGAGAGAGTGCAAAT
TGATCAAGTGGTAGAAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGT
TGATTTACATGGAACCAGATTTAGAGAAAAAGAAAAGTGCATTGAGTGAA
TTCgctgaaaaattccaaaaacatTTGAATTTCATCGAAAGATTTTTGAA
GAACAATCCATCAGGTTATTTGGTTGGAAATAAGATCACTTTAGCAGATA
TTTGTCTATTCGTTTTCGGCGACATTGTCACTTTCCATTATCCAACCTTT
TTTGATAACCAAccagaaatcaaaaaattcatcAGCCGTTTTCATGAAAT
TGAACAAGTCAAAAATTATGTGGAAAAGAAACGAACCCATAAAATGCATG
TTTATTGAatggtCAAATACATACTTCATTATTTCCCAGTGGTTGGACGA
GCTGAGCATGCGCGAGTGATGTTCGAATTGGCAGGAGCTGaatatgaata
caaaacatATGTGTTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATC
CCAACCTGTTCCCACTTTCACAAGTTCCAACATTAGAAGTCGATGGTCAA
GTTATTACACAGTCATATGCCATCAATAGATACTTAGCACATGAGTTTGG
ATTTTATGGTGATTCGAATACTGAGAGAGTGCAAATTGATCAAGTGGTAG
AAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGTTGATTTACATGGAA
CCAGATTTAGAGAAAAAGAAAAGTGCATTGAGTGAATTCgctgaaaaatt
ccaaaaacatTTGAATTTCATCGAAAGATTTTTGAAGAACAATCCATCAG
GTTATTTGGTTGGAAATAAGATCACTTTAGCAGATATTTGTCTATTCGTT
TTCGGCGACATTGTCACTTTCCATTATCCAACCTTTTTTGATAACCAAcc
agaaatcaaaaaattcatcAGCCGTTTTCATGAAATTGAACAAGTCAAAA
ATTATGTGGAAAAGAAACGAACCCATAAAATGCATGTTTATTGAatggtC
AAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCATGCGCG
AGTGATGTTCGAATTGGCAGGAGCTGaatatgaatacaaaacatATGTGT
TCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCCCAACCTGTTCCCA
CTTTCACAAGTTCCAACATTAGAAGTCGATGGTCAAGTTATTACACAGTC
ATATGCCATCAATAGATACTTAGCACATGAGTTTGGATTTTATGGTGATT
CGAATACTGAGAGAGTGCAAATTGATCAAGTGGTAGAAACACTTGTTGAA
ATGTTCGCAGAAATGGCTCAGTTGATTTACATGGAACCAGATTTAGAGAA
AAAGAAAAGTGCATTGAGTGAATTCgctgaaaaattccaaaaacatTTGA
ATTTCATCGAAAGATTTTTGAAGAACAATCCATCAGGTTATTTGGTTGGA
AATAAGATCACTTTAGCAGATATTTGTCTATTCGTTTTCGGCGACATTGT
CACTTTCCATTATCCAACCTTTTTTGATAACCAAccagaaatcaaaaaat
tcatcAGCCGTTTTCATGAAATTGAACAAGTCAAAAATTATGTGGAAAAG
AAACGAACCCATAAAATGCATGTTTATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036838XLOC_036838Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058462-exon-scaffold_311-1491911889:703794..703980TCONS_00058462-exon-scaffold_311-1491911889:703794..703980Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1510915933:703794..703980TCONS_00058462-exon-scaffold_311-1510915933:703794..703980Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1575043694:703794..703980TCONS_00058462-exon-scaffold_311-1575043694:703794..703980Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1491911889:704696..704726TCONS_00058462-exon-scaffold_311-1491911889:704696..704726Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1510915933:704696..704726TCONS_00058462-exon-scaffold_311-1510915933:704696..704726Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1575043694:704696..704726TCONS_00058462-exon-scaffold_311-1575043694:704696..704726Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1491911889:706485..706671TCONS_00058462-exon-scaffold_311-1491911889:706485..706671Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1510915933:706485..706671TCONS_00058462-exon-scaffold_311-1510915933:706485..706671Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1575043694:706485..706671TCONS_00058462-exon-scaffold_311-1575043694:706485..706671Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1491911889:708194..708295TCONS_00058462-exon-scaffold_311-1491911889:708194..708295Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1510915933:708194..708295TCONS_00058462-exon-scaffold_311-1510915933:708194..708295Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1575043694:708194..708295TCONS_00058462-exon-scaffold_311-1575043694:708194..708295Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1491911889:710265..711491TCONS_00058462-exon-scaffold_311-1491911889:710265..711491Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1510915933:710265..711491TCONS_00058462-exon-scaffold_311-1510915933:710265..711491Clytia hemisphaericaexon
TCONS_00058462-exon-scaffold_311-1575043694:710265..711491TCONS_00058462-exon-scaffold_311-1575043694:710265..711491Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058462-proteinTCONS_00058462-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:703794..711491 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.86609	4.16017	1.32578	2.36042	0.0834421	0.0038905	1.91354e-07	1.37334e-07	0.592778	0.00628771	0.544725	1.11528	0.668832	0.0956758	1.00728e-05	0.00471881	5.04076e-05	1.13364	0.93493	1.81805	6.65287	7.90879	4.15963	3.66508	1.6705	1.78284	2.49759e-05	0.624966	1.22638	0.00156742
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004046GST_C
IPR004045Glutathione_S-Trfase_N
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00058462 vs. Swiss-Prot (Human)
Match: GSTA1 (Glutathione S-transferase A1 OS=Homo sapiens GN=GSTA1 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 4.778e-19
Identity = 63/203 (31.03%), Postives = 101/203 (49.75%), Query Frame = 1 
Query:   61 LHYFPVVGRAEHARVMFELAGAEYEYKTYVFGGEWNEAKKNHPNLFPLSQVPTLEVDGQVITQSYAINRYLAHEFGFYGDSNTERVQIDQVVETLVEMFAEMAQLIYMEPDLEKKKSALSEFAEKFQ-KHLNFIERFLKNNPSGYLVGNKITLADICLFVFGDIVTFHYPTFFDNQPEIKKFISRFHEIEQVKNYVEKKRTHK 666
            LHYF   GR E  R +   AG E+E K ++   E  +  +N   L    QVP +E+DG  + Q+ AI  Y+A ++  YG    ER  ID  +E + ++  EM  L+ + P  E+K + L+   EK + ++    E+ LK++   YLVGNK++ ADI L      V     +   + P +K   +R   +  VK +++     K
Sbjct:    7 LHYFNARGRMESTRWLLAAAGVEFEEK-FIKSAEDLDKLRNDGYLM-FQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADL-GEMILLLPVCPP-EEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRK 205
The following BLAST results are available for this feature:
BLAST of TCONS_00058462 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GSTA14.778e-1931.03Glutathione S-transferase A1 OS=Homo sapiens GN=GS... [more]
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