TCONS_00058554 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058554
Unique NameTCONS_00058554
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2635

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058554 ID=TCONS_00058554|Name=TCONS_00058554|organism=Clytia hemisphaerica|type=transcript|length=2635bp
AAATAATTTAGAATGGAGATCTAAGAAAAGTCGTACTTACTATGAGCTAT
GGTatcaagtttttgttttggaTTAGTTAAATGGTTGGCTTTGACCTTTC
AAGGGGATCATGTTACCCATATGTATCAATACAGAACGAAGGGCAGCAAA
AAGTTCACGAGTCAGAATCGCATATTGGAGCCAATTTTAAGATTTCCACT
GGTCCCTTTGTAGTTTGATATCATGATGCCGAAGAATTTGCCAATTGTTT
ATTGAAACCCTTACACAAAAatgATGTTAGCAATACACTGACCAGATTTC
GCTTCATTCCGAGATCGCAAGTCGTCCTAGAAACTACTCAAAGACAATTT
TGACAAACTGACAAGACGGTTATTTGCAAGATATAAAAACTGATTTAAAG
ACACCTTCAAAGAAATTGGGAATTACTTCGGATTGAATTGCTAGCAAagT
AACTGTGCAACAATAAACAACCAATCACAGacgtttatcaaagaagaaga
gCCAATGGGAATCGCAGGAAAACTCGAAAACAAAAGCGTCCACATTCACC
AAGATGGCGGATTGAGTCATGTGATACATTTCAATGATGGTACAACAACA
CGGACACCGAAATGTGCTCGATGTCGAAATCATGGCCTTGACCGAGAATT
GAAAGGACATAAAGAGAAATGTGAATTCAAAGATTGCACATGCCGCTCAT
GCTTAGTTGTTGTTGAACGTCAAAAGATCACGGCCGCCCGTGTGGCTCAT
CTACGCCAACAACGTAAAGTGGCCGCCAAACGTGGGGTCGCTATTCCCAA
CCATAAATACTCACATTATAACCCGTTGACGGAGGAAGAAGAGTATATCT
TATCTTCACCCTTGCAAAAGAAAACCACAAGTGGAAAAATATCGCCAACC
TATCACCAAGgTCATCATGTCACTAACCGGTATTATCACCATAAACCAAC
ATGGACTTCTTACCAACCACCAACCCTCGCCAAAAACGGATCTCATCCTC
CCTATCCTTCCCCACCACGGAGAGGGGAGTACCCACACCACCACCATCAT
CATCAGCCCAATGTAGACAAACCAGGTCCAATCAGATACCACCATTCTCC
TGTCTATCACTATCAACCCTACCCTGTGGCAAGGTACTTTCCCTACCATC
AGCCACACTACCAGCATACTTCATGTCATTCCCCACCTAGGGACTCTATG
AGATCATCACCTGCATCTCTCCCTGGAAGTTACATCGTCCCTTCCCCTCC
TTCCATACATGATCGAAGAGACGTCTTCAGGCCGATTGTAATCGACCCAC
GGCGTGACGATGCCAGCGAATCAgaagatgatgacgtcattgatgtAGTC
ATGGAAACAAGAAATAAAGATGGTCGTCATGGTAACTCTAAACAAAGAGA
TGACAAGAAAATAGAAGCTCTGAGAGTGATGTTTCCAGATTTAGACATGC
GCTCGTTACACGATCTCTATGAGGATTTTGACCAGGATGTCCAGGCGGCT
GTTGAATATATGTTATTCAAAAAGCGTAAAAACGAACAAGAGGAATTCAA
ACTGAACAATCAGCAGCAATCATCAATCCTCACCACAACAGATTCTAAGA
GAAGTTTAATACATTCTCCAAAAACAACTACTTCATCTAACAACAAACCA
TATTATATTGACTCTCTAATCAGTAAATGTCAACCTAAAGACAACTCTGA
TACAAATATGAAAAGCAAAATATCAATTTCTTCGACTGCGTAAAATCATT
TACAGTAAAtagataattttttataatataaAGAATATTGTATAAAAATT
CTTGTTATCCTTGTAAATACTTTAAATAATACACCATTAAATTGACGAAA
TGGGTTCTTCCAGAAAATctttgtacatggggggtggaggatatgtatgg
tggggtggaggatatattggatattttgtccgggggcaatggaaaatctg
caaaatttgccttgttttgggGACGAACTTGCTCTGATTAGGGGTAATTT
TGATTATCttggggggtcaactgatgcttatccggggggtcaaaattaac
aatgtccgggggtaaatgtgcaaaaaatattatatcctccaccccacata
atatatttttttctgaaagagcccAATACCTGAGGGAACTAGGCTCAGTT
CACTTTACCATGTAGGGTTGATTGAGATTTGTGGCATACATTTATCCTAC
GGTACAGTTAGAATTGAGAAGGCTCCTCTGGACTGGACTATTTTCATCAA
AGCTTAAATAAATCAACCTGCTAATTCGAACTGGAACGAGAAGTCGAATT
ACAGAACGACTCGAATTTATGGAAAACATTGTACTAGGGTTTCCCTTAGA
CCTAAATCAATTCTAGAAAGATTCAGATTAACTCGAGAGTTCACTACACT
TAGCATCGCCCTTTTTGTGGAAGTTCCCTCATAGCCCTCTCCACATTGTA
AAGGTTTTATGGaaaatttctctctttaaaatttAACGTAAATATCAAAC
GTCATACTTGGGAATAGACCATGTTATTATATTTCTATGCCTTTCGGGAA
ATATAATTCGATATTTTCTGAAACTAATGCAAATAGttatattattttaa
tgtaaataAGATATATAATAAATCATGACAAAAAC
Run BLAST on NCBI

protein sequence of TCONS_00058554-protein

>TCONS_00058554-protein ID=TCONS_00058554-protein|Name=TCONS_00058554-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MGIAGKLENKSVHIHQDGGLSHVIHFNDGTTTRTPKCARCRNHGLDRELK
GHKEKCEFKDCTCRSCLVVVERQKITAARVAHLRQQRKVAAKRGVAIPNH
KYSHYNPLTEEEEYILSSPLQKKTTSGKISPTYHQGHHVTNRYYHHKPTW
TSYQPPTLAKNGSHPPYPSPPRRGEYPHHHHHHQPNVDKPGPIRYHHSPV
YHYQPYPVARYFPYHQPHYQHTSCHSPPRDSMRSSPASLPGSYIVPSPPS
IHDRRDVFRPIVIDPRRDDASESEDDDVIDVVMETRNKDGRHGNSKQRDD
KKIEALRVMFPDLDMRSLHDLYEDFDQDVQAAVEYMLFKKRKNEQEEFKL
NNQQQSSILTTTDSKRSLIHSPKTTTSSNNKPYYIDSLISKCQPKDNSDT
NMKSKISISSTA
Run BLAST on NCBI

transcript from alignment at scaffold_311:900798..916292-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058554 ID=TCONS_00058554|Name=TCONS_00058554|organism=Clytia hemisphaerica|type=transcript|length=15495bp|location=Sequence derived from alignment at scaffold_311:900798..916292- (Clytia hemisphaerica)
AAATAATTTAGAATGGAGATCTAAGAAAAGTCGTACTTACTATGAGCTAT
GGTATCAAGTTTTTGTTTTGGATTAGTTAAATGGTTGGCTTTGACCTTTC
AAGGGGATCATGTTACCCATATGTATCAATACAGGTAATTTACCAGGATG
ATATCTACACCCGTGTCTCACTGCCCCACTGGAACTTTTTTCCTCAGTGG
GAAGTCATTCTCCCAGTGGGCCTGAAATTCCAGGGTATTTTCCCACCGGG
GACGAAATTTTTGNGTGGGAAGTCATTCTCCCAGTGGGCCTGAAATTCCA
GGGTATTTTCCCACCGGGGACGAAATTTTTGCCAAATTTTCCAGTGGGGT
GGGGCTCCCAGTGGGTCTGTTACACAGGGATGATATCTTGATTGATTAAC
TCAGGCTGTTTTTTTATCCATAAGGTATTCTTTTTTCTCCAGGATTTAGC
TTTAGCTAATTACTTTAAAAAGTATTTCTGTACTTAAAAAGTACTAAGTG
GCACTTTTTACACTGTGCTTGGATAGTGGTAGTATTCGAGCGTTTGCTTT
TTTGAACTATTTCCATCAATGATCTTTTCTGTTGATTTTGTTGTATGTTT
TTTCTTTGGATTGGTTTCGCTAGTTTTGGGCTCAGATGTTCAACATTTTC
TCATCCGGGTCAACTGAGACATTTCTAAATCACTTATGATGAACCTTTTT
TGTTCCTTTATCTCTTCAATGTGTCAAGTTTCAAGACCATTGATTGATAA
CTTTATTATACGTTCTTTTTTCTTAGAACGAAGGGCAGCAAAAAGTTCAC
GAGTCAGAATCGCATATTGGAGCCAATTTTAAGATTTCCACTGGTAATAT
TTGTCAGATACATGAACATTGATGTATTAAGAATTGAAAATTATATTTAT
CGTCACAGCAGGAATTTACAAAATGATACCAGGCTTACATTTTCCTAGGG
TTACCAGTAGAAATTGTATCTCACAAAGCTGATTTCGCATGGTAGAACCT
TGAACAGTAGAAATTTGTTATAAAACAGTGTTTTAACTTTCATATTTAAC
AGGTCCCTTTGTAGTTTGATATCATGATGCCGAAGAATTTGCCAATTGTT
TATTGAAACCCTTACACAAAAATGGTAAGATTTTTTTTAACTTGATGATT
CCACGTGAAATTTTAATTATTCAAAATCTAAAGTTACAAAAAAAACCTAA
AGTTATGTTCTCGCCAAGGTGGTTTATCAATGTAGGGGGTGATAAAATTG
ATTATTTTTGGTCCAAAATTTGAATTAAGAAGGATTTAATTCAATAATTT
TGTTAAAGTATGGACGCGATGGGAAATGATATCTAAAATTTATAAAATAG
TTATTTTAAAACTAAAGTTACATTTTCAATTAAGAAATCATCTAACTCCT
CTGGAATAAAGAACCACAGTTACTATGGTAACACGATGTACATTTTTCAT
TGAAAGTACCTGTTTGTCCTGTTTTGAAAAAAACTCTCAAAGAATTTTGA
AACCGATAATTTATGATTCTTTCACGCTATCCATAGGGGTTAAAGCAAAC
TGTTTCTCCAAGGGAATGAATGACTATTGTCTATTTATTTCTACTATATT
TTTGAAAAGTGAAAACTGAATATATTGTATAGGGTGGGTTACTAATTTTT
CACGATGGGAAAATATGTCAGTCGTTACTTTGGTTNTTTTTGATACTCAC
CAGGCACTATTTGGGAAATTATTATCAAAGATTGAAAGAAACTTTTGTGA
ACTATTTTTGAGGAAATTTCAGTACACTCACCATATAGGCGGTCATCGAA
AAATTGTTCTATTCGCGTCACCCGCCCGCATCAAATTTTCCGCTGATTTT
CCGGTTCGGAGATGCGGATNAAATTTTGTCTGACCCGGTCACTCATTTGT
ACTAGTTTTTTATCGTGTCATTTCCCCTCGAAATCCTTCTTGACCAATCA
GATTCGTGTAATTGCCCCCGNACAGCGTAAATATATGATTTTGAGCTGTG
CTTTTCACGGTAGCTCTGACGACCATCGAAAAATTGTTTTGCTCGCGTTA
CCACCCGCCCCTGAGTTATTGGCGTGATTAAAAAAAACCCGGGAATGTTT
TCGACCGCCCGTCTGCCCGCATGCATTTTTAACACCCGTTGCGACGCGAA
CAGAGAACGCATTTTTTCGATGACCGCCATATCATCTAATTTCATGTTTC
TTATTTTCCCTTTAAGCTTTTTATGAATGAGGATTCGTTTACCTTGACAA
CGCAATGTTGCCTCGTTTACTGCTACTGTTACCACGTTACGTCATGACTT
TCCATCCTTCTACACGATATTGCTGTTACAACTGCAAGATAACTGACATA
TCTTTTTAATGTAAACAATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNACGCATTTACTTTTGACTTTCGGA
TTAAACAAGATATATACATATACCAATCAGTGAATTTGCTGACAGTCAAA
TTACAATCTGTCTCCTGTCTTAGACATTCAGTAGGAGATTGATTCATTTT
TCGACCCAACCAGTTTGTCCCCAATAATGAACAATGATTAAAATGATAAT
AGTAGAACAATGATTGAATATGGACAAAAGTGATTATTGTATGTTGGTGG
TTGAATTGGCAACGAAATGCCACTGTAACTAATTTATTCGACAATCGTCA
TTCAACATACTCTACTCCCAACAAGAATGCTTAAAGAACCTGTGTTATGA
TGGCATGGTACTTCAACAGTAAGTACAAATATTTTTTTCTTTGTGTACAT
TTATAAGACTTGGTTTTATTAATCTTTTGTGTTTAACCTGTGTTCTTTTT
GATACTCACCAGGCACTATTTGGGAAATTATTATCAAAGATTGAAAGAAA
CTTTTGTGAACTATTTTTGAGGAAATTTCAGTACACACACCATATAGGCA
GTCATCGAAAAATTGTTCTATTCGCGTCACCCACCCCCATCAAATTNTGT
TTGGTTCTACTATGTTTCATTTATATTTCAAATTGGTTGAAATAAATAAT
AGTTGCATGTCTTTTGACTGGTTTAGTATCTGTAACTGTCTGTAATTGAT
TATACCTGGACACTTTTCCTAATTAATGTTTTAAGATTCGTATTTTATTC
TTTGTAAAAAGTAATTCACATTTTTAGAAAAAAAAAATATGTTTCGTTTA
TGTTAGCTTATTCATTGATATCTCAAAGAAAATGCTGAGAAGAATCATTC
TAACTATTCCAAATCATTTCCAAACTTTTGCTATAAAGCATTAAAAAGCC
TTAAATTAGCATTAATTAGTTTTTACAAGCATTTGTACTAGCGGGTGGCA
GTTAGTGAAAGCTATGGCTAGTTATGTTAGGTTGACGATTATCCTTATAA
CAAAAAACAACCATACTAGAAAAACATTATATTTATTAGTAATGGAAAAT
ATATTGCTACTTGAATTTATGAGAAATTTTGAAATATTAACCATTTTTTC
CAATCTACATACCAATCTATCCAATCTGGAAACTATAAGATTGTTCTCAA
CCATTTTTTTATTGCCGTGATGGTCGATTTAAAAAAAACCTTCTAGTCTA
TCCCAGTGACTATAGCTGGTCTTCTTTTTGGGATAATTCTTGACGATTGT
ATCCAAACAGTACTAAGCCAGTACCGTTAAAAGATTTTTGGTCGGGGGAA
CTTCATTGATCCAAATTTTGTAGAAGGAATCTTTGTACTTTATACCAAAT
TTTACCTAAATATGAATAACTCCTGATTCTTATTTTTCTTTTCCCATAAG
GGTTCAAACAAGTAAATAGGCTTGACATGACCTAGTATCCCTTTTATGCA
CGTTGTTTTTTGCGCACTGTCCGTATTCCGCTAATTTAAAATTCAGTTAT
TTTTATTTTATGTGAAAAAAAATCAAAGTCCATCCCTGAAAAAATCGAAA
GATTACATTATTTTTGGTATCCATAAATGTAATCTACATAAATTATGCAT
AATGACGTCAATGTATCTATGTATTTAGTCAGTTTTACTTTTTGATTGAA
ATATTGCTGTCACGATATCTTGTCTGCTTTTTCAGATGTTAGCAATACAC
TGACCAGATTTCGCTTCATTCCGAGATCGCAAGTCGTCCTAGAAACTACT
CAAAGACAATTTTGACAAACTGACAAGACGGTTATTTGCAAGATATAAAA
ACTGATTTAAAGACACCTTCAAAGAAATTGGGAATTACTTCGGATTGAAT
TGCTAGCAAAGGTATTGTTTTTTTTAATTTTGTTCTTTTTATTGTGTGTA
CTAATTCAAATTTAAAGATAAGCGGAAAGCTTGCGTCCCGGAGGTTACCG
TTGAACTAGGTAGGGTTTTGTATTTTTCAAAAATTTTCAAAACATGACCT
TAAGGTTAAGGACCTTTCCTTTTGACTCGAGATTTGGCCCAAATTTTGCT
AGTCAGAAAAAACACGAAAAAAATTACATTCCGCCGAACTATATATTTCA
TTCCCCAGCTCAAGGACATCCACCTATGATTTGTCAGAGCTAGTTTGTTA
TTCGTCGGGCTATTAAAAATAATGCAAAAAACCCTTGACCAGATATTTCA
CTTGTCGAACGGCAGCTCCCTTTCAGTATAAGCATAAGTACCCTTAGAGA
ATTCACATTTTTAGCCGTCTTGAAAATTGTTCTGACTAGTTGATAATGAT
GCAAAGGTTATCGGGTATACTTTTAAAAATATTAAGCAGTTATTGGACAA
AGTCGAATCCAATATGCAAAAATATTGGGCGTGCGAGAAAAGATATCTTC
AATATCTTTTTTCGTAGCCCAATATTTTTCATATTGGATGAGACTGCGTC
TAAATAAATGGTTTATTATAACATTATTATCCATATCGGACATTCAAACA
ACGTTTTTTCTAGCGTCAGCCAAGTCTTTTCGCTTCAATGCAATGACTTT
AACAAGTTTTGAGAACCTATGCGAGCGGGCCGCAAATGACCGNATGTAGC
CTCCATGGAAGCTATATATTCGAAAATATTGGACAGCAAAGAAGCCAATC
AAATGTCGCTATTTACGCGCGTCGGATAATAATCTCTTTTATGATATGGA
AAAAGCAACGCGCCTCTTATGTTGACAAAGAAAAATTGACGGAAGAATTT
CTCACGATTCTCGCTGCGGCGCGGGAGGGGAAGAAATTTCTTCTTATGTT
TGATTCTGTGTAAGCAAATGCAGCCCCTTCTCACAGACAAACCCACTGTG
ACCCCTTACCACTGGGAAAACTGTCCAAAATATCGTCCCGGTGGAAAATT
ATCCTTCAATTTTTGTCCCCACAGAAAATAATCAAATAAACAAGTCCTCG
CCATTTTTCCAATCCCCGTTGCATTTTCCGATTTAAAAGCAAAAAACTTT
GAATCCCCAGCCGAAATATGGAAATATCAATCCCCATCGATTTTAAATCC
GATATTTTTGTCCCCACTGGCGGAAAAAAATCCTACTGTGTCTTTGAGAA
GAGGGTGTGCAAATGGTAGGAGAAGTTGCTCTTCTCTCTTCAATATCTTA
AGAAATTCCGGCTGATCCAATGCATTTTGGCAGGAATATTTTGAAACACA
TGTTTACTGTTCAATCGTAAGCAGGGGGGGGGGGGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGTGTTTTT
TTCTGACGTTAGTTTAGTCTTTTCGCTTCAATGCAACGACTTCAATAAAG
TTCCGAGCGGGCCGCAAATGACGTTATCGCCCTATAATAAGGGCGGTTAA
TGATATTTCAGCCCTCTGAAGCGCGACGCTTTAGTTTTCTCAGCGCGGGT
ATGACTATTTGAGTCATAGAACCTTTCAATACCGCCCGCCGTTCGAATCT
TTAATGGCTTACTTAATGACCGCTATATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGGGGGGGGGGGGGTCGGT
ACTAAAATTTCAGACATCATGACTTTTGATGACGTGGTGGTATTACAAAA
AAAACTTTAAATTATTTCTAGTACCATGTGTACTAAAATCCTAAATTAGG
TGGGATCTTCAAGAATTTTTAAAAATAATTTTAGTACATGAGTACTAAAA
ATCACCAAATTTTAGGAAATTTAACTATTGACCGAGCATTTTAGGCAAAA
TGAAAAAAAATAACAACTTTTCATATATAAGATTTAAACACCTCTGTGTC
ACAAATTAAGCAAAATTTATTTCGTCCTCGATGGGAAAATACCCTTGAAT
TTCAGCCCCACTGGGAAAATGAATTTGATTCCCACACGAAATTCCATGTT
TAAAAATTGCACTCCAAAACCATCCCCACTGGGTTTATTAACCTTGGAAA
AATAAAATTTCTATCCCCAATAGCATTTCAATAGGAATTTTTATCCCCAC
TGAGGAAAAAGGTTCTACCGGGGCTGTGAAACAGGGGTGTTTCTGAGTCT
TTATCTAGAATAGAGAGAGATTGATCAAAATAAGCCTAATTTAGGTGTTC
ACTATGCTAAAATATCAAAAAAAATTCCTTTTTCAAAAATTAGGTGGGGG
TATGTCAAAAATCGTCAAAAGACCTTTTAGTACTCATATGTGTCTTGGAT
TTTAGTACCGACCCCCCCCCTGTCGTAAGTTTTATTTGAATTTAAAGGGT
TCGTGTTTTTTGTTTTGATTTGATTTGATTATTTAGTTGTGGGCTGGTAT
GAATTAACTGCATTTCATGAAAAATTCATCCTTGACTGGGAAAAAAATGT
GAAGAAATGAAACGCCTTTCATGATTGTGTCTGCCTTTTAAAGGCGGATC
AGTAATATTTCCCGGTTACTTCATCAACTTTATAAATTATTTCGAATAAT
TTTTCATAAAAGATTCTGTGATGTTTAACTCTTTCCCCTTTAGACCGGTG
TCAGAATTAAATTTCTTGGATATTTTCTTTTTAAACACCGCTGTCTCACA
AACCCGGTGGAATTTTTTTCCTTAGTGGGGATGGTCTTGGAGTACAATTT
TTAAACATTGAATTTCGAATGGGGATGAAATTAAAGTCAATTTCCAAGTG
GGACTGAAATTCTAGGGTATTTTCCCACCGGAGACGAAATTTTTGCCAGA
TTTTCCAGTGGGGTGGGGTGGGGTCCCAGCGTTTCTGTGACACAGGGGTA
TTTTTAAGTGGATTCCTGGTATACAGGAGCTTAGGTCTTTGAAAACCAGT
CAAGATAAAATGAAATGATTCCAGAATTTTCCTCTTATGATTCACTGTTT
CAAATTGTGATTTTTGATTGAAGACGAAAAATAAATTCTACGGTGTTGTT
TATTTGAAATTTTGTTTTCCAAATGTCCAGTCAATACAGATTGTATTTTC
GTTGAATCTTTTTTTGAATAAATTCTAAAATTCGATACGTCAATAGTAGT
GGGATATGTTTTTTTTTGATGATTTTATAAATATTTTTCACCCGCCCTTG
TTAAAATATTCCTATTTCTGTGTATTCCGCAGGGGTTGAGCTAAATATTG
ATGGTGGGAAGTCTAAACTTTCCAAGTCCATTACCAATATTACTCATTCC
AATAAATGTTTTTTTTTTATGAAAAGCATTTTGTATTTATTATTCCATTC
CTATAATTCATTTTCACTTTTTGATTTATATCGAATTTAGTTTTCCTAAA
TATCCTCAGGTGGACCATATACTAACCTCTTTCTATAAAATATCATAGAT
TCTTCAAAATAGCTTAAAAAATATTTTCATAGCAAAATATCATTGAAAAT
AAATACTTTTTAAGCTATTACATACAATTTTTTCGAGGGAAATTTTCCCG
AAATTTGACAATAATTTGAAGTAAATAGTCTTTTCATTTATTTACCAAAA
TTTGAAAAAGAATTTTATGTTGATTTGCGTTAAAAGTTCAAGTGAATTTA
TACTTAGTTAAAAAGTGTATAAATTATAAATTTTAGGGGGCTGGCATCTA
TTTTTTTGGGGGAAATTTTCCCTAAAAAATTTACACGCCCTCTTTAAAAT
ACTGGTGTAATAGGAATCTATAAACCAAATTAATACTTTTAATTTTTGCT
TTTGCTTCCTTCCTTCTCTCCTCTTTTTAAAGGACAAACAAATAATTCCC
ATAAGGGACAATAAGTTAGTCATTTCTTTACAAATTAGCAAACCAGGGGG
TTTGGTTGCACAATATTTATAAAGGATGAAGCAAAAAAGATTTTCTTCAA
CAATTTCAATTTTCATTTTTGTTAGTTAACACGCTTGAGAAAATTTGTTG
CCATATATAGTTTGTGAAGAGGATATCCTATCTTTTACTTTTCTTATTGA
TTACTGAGGGCGTAAGATTATACTTCTCACCTCACACCACTGTGCGCAAG
TTTACTGAACCGAAGAAGTAGAAATTATTCACACTGGGGCCAAGACCCCC
TGCTGGTAAGATTACCTCATATCATTTTAACCATTTATTTACTATGGTTA
CCAAATCGATGAAAAGAAATTTCCGCTGCTGTGCGTAGTGCGTGCGATTT
TTTTTCTCTTGTTTGCGCGGGTGTCGATTTCATGTTTTTCCCGTTTGTTC
TAAAGCTTTTTCCTGCCCTTTAAATTCATACAGGAAATTTAAATATAGTT
ATTTCATGTTGAACTTCTTGAAAATATTGTATGCTTATTATTTTTTTGTA
TACTTTCTAATGATTACCGCGTTTTTCACTCTGCGAATTTCAAAGGAGCG
CATTTCAAAATATTTTCACCTTGAGGAATGCGTAATTTTGCCTTACTTTT
CCTGGTAATGCTTTATGAAAAGCCGCATGCATTTAAAATTTCATCTAAAC
ACTAGAGTAGTGATACTTTTGGTTTGGATTAACATCAATAAGTAAACACA
ATGTAGTAAAAAAAGTTTTACCTTTGAAGAAGAAAAATTGAATAAAAATG
GTGAAAAGATACGAAAACAATTTACAAATTTGAACAGCTTTTGACAGAGA
TTGTATTCAGTGATTCTATGTTAGGGTGTGGCGAGGGTTAAGGCACAACC
AAGGGCCTCAAGTGAGTAACTTTTTTACTGCTTCACAGCTAGCCAGAAAA
TCATGCCTATTGCGCACCATACGTTTATTGATACAATATTAATCAGATAT
TGTACATGGAGTTAAGAAAAAAAGAAAATTGAAAAAGAAATTTCAGGAAA
TTTAACAATTTGTGTAAATTTAATACACGGTTTTCTTCCTTTGATTATTA
AAGAATTCACGATTATTATATAAGAGCGTTTGTATTTCATGGTATAAATT
CAGTTTGAGGGAAAAGGTCAACCAGGAAACAGCCTGGTAGTTTGGAATTT
TTAATTTTTAAAAGTCATAGATTTGCTGAAAAATGAGGTATGATTTAAAT
TTGATATTCTTTTTTTAACGGAAAGGTTTTAACTCTAAAAATACATTAAC
AGAGGTTTTGCTTTGTTTTTGGTAGGCTGGCGAATGAAAAATTAACTCTT
TTTCTAAAATTTTTCTAGATTCTAAGCCGGCGAATTCTTAGCAAGCGTAA
TGTGTTGATTCGCGTAAATATGTACTTGAGGCGGTGAACGGAACTTTTTG
AACGGCGAATTGTAATTTTTTTCGTGCCTTGGACCGGCGAAATTCACCGT
TCGCCGGGCCTAAATAATACCCTTGCACAAAAAAAAGTCTCCGCTAACCA
AGAAACTTTGGTAGTGATAAGGATTAGCAGTATTTGTAGTATATAGGCTT
GTCTCACAGCCACGATGGAACTTCTTCTCACAGTGGGGGAATTGAAATTT
TATCAAAATCCCAATGAGGATGGAAATTCTATTGTTCCCAAGGTTAACAA
ATCCATTGGGGATGGTTTTGGAATACAATTTTTCCATTGAATTTCAAATG
AAGATAAAGAAAAACTCCCAGAATTTCCCAGTAGGGCTGATATCGTGGAG
TGTTTTTCCCACCTGAGACGAATTTTGATCAAATTTTCCAGTAGAGCGAG
AGTTCCACCGGGTCTGTGACACAGCACTATTTTTCGTGAATTTCTATATT
GCTTCTATATTTTGACCAGATAATGTTAAAGGTGGCTTCGATTGATTCTT
TCCACATTATTTGAAATTGCATTCCGTTTTCCTGGAAGTCTTGAATCGTC
GGGCCTCTCATACAGGATTTTTATCCCATTAATAGATCGTACGTAAGATG
TGTACGTGACTGAATGTTTGAGTAAGAATTTCAACATTTCTTCAATTCTG
GGCTTAAATATTTACGAATACGGTTTTCTTTTTCGCAAATCGCGTGCTTC
ATACATTTGTTAATGACAAGCTTATTATAAACAACGTCTTGTTGAATTCA
ACACTTTGACATAGTTTCTACAAACTTATTACACCGTAAGTCGAACCTCC
AAAGATTTCGCTTTTGATTTATTTAAGATCCCTCATGCTTGTCATTTTGT
TTACCCGGCATCATGATTTTCAACGAAGTATAAAAAATTTAAGGTCATGC
ATCTTTTTCTCAGGGAATTACATCAGAGTATTTTGTTTGAAGTCAAGAAT
TTTGAAGATAACTTTCCGATAGATCAGTGAAAATGACCGAAAATACTTGG
AAATCTTCTCATCTTTACCGACCTTGAAATTGAAAGGTATAAAGGAAGGT
TAGGGAAGGCAAAGTCATTATTCGAACATGATAAAACAGTTGGCTCGTGT
ACAAATTTCACTCAATCTTTTACCCAGAGCCAGAGTCACTAGCATATCAT
AATTTTTTTTTTATTTTTACAATGCTTGTGCGAGCACTATCAGAATAAAA
AATGTGAGCAAAGGGACTAAGCTCGAGTTTCAGTATTATTTCCTTGTATT
GTATTGCCAAAAGGTACCTTTTTGTACAAATTAAAAGTGGTCAAATTGGC
TGTTATATAAAAATTACATCGAAATCTTCTAATCTCTTTTATGCTTTTTT
CTCTTCTTCAGTAACTGTGCAACAATAAACAACCAATCACAGACGTTTAT
CAAAGAAGAAGAGCCAATGGGAATCGCAGGAAAACTCGAAAACAAAAGCG
TCCACATTCACCAAGATGGCGGATTGAGTCATGTGATACATTTCAATGAT
GGTACAACAACACGGACACCGAAATGTGCTCGATGTCGAAATCATGGCCT
TGACCGAGAATTGAAAGGTACCCCTATTTTAGAAATTATTTTTACTGCGT
CGTTTTATTTGAGCTTTTTGAATTTTCAGAGATCCAAGAAAAAATGCCTA
ACGCGTTTGTAATTGCAAGCTTCATTAGTTTATATAATCATAAAGACGTT
AGACTTAAGACCTTGATTTTTTTGTCGATGAAAATTCAAAAATCACGTCT
TTGAATTCATTTTGAATTCATCTTTTTAGGACATAAAGAGAAATGTGAAT
TCAAAGATTGCACATGCCGCTCATGCTTAGTTGTTGTTGAACGTCAAAAG
ATCACGGCCGCCCGTGTGGCTCATCTACGCCAACAACGTAAAGTGGCCGC
CAAACGTGGGGTCGCTATTCCCAACCATAAATACTCACATTATAACCCGT
TGACGGAGGAAGAAGAGTATATCTTATCTTCACCCTTGCAAAAGAAAACC
ACAAGTGGAAAAATATCGCCAACCTATCACCAAGGTAAATCCCCGAATGT
TCTGATATGTTGTTTGAAGATGAGATTGAGATACAGTGTTTTAGAAATGA
AAAAAATGTTTGATTATTTACCACTCGAAACTTGCAGTAAAATACTTATT
ATGATTTTTAAAATTTTTTGCTATTAAGCACTTTGTTGACATAACTATTA
TTTGGGGCAACATTGGCTAATTTTCAGTAGCCATTATTTTCAATGTCCAT
TTTCATTTTCATTTTCTCAGGTCATCATGTCACTAACCGGTATTATCACC
ATAAACCAACATGGACTTCTTACCAACCACCAACCCTCGCCAAAAACGGA
TCTCATCCTCCCTATCCTTCCCCACCACGGAGAGGGGAGTACCCACACCA
CCACCATCATCATCAGCCCAATGTAGACAAACCAGGTCCAATCAGATACC
ACCATTCTCCTGTCTATCACTATCAACCCTACCCTGTGGCAAGGTACTTT
CCCTACCATCAGCCACACTACCAGCATACTTCATGTCATTCCCCACCTAG
GGACTCTATGAGATCATCACCTGCATCTCTCCCTGGAAGTTACATCGTCC
CTTCCCCTCCTTCCATACATGATCGAAGAGACGTCTTCAGGCCGATTGTA
ATCGACCCACGGCGTGACGATGCCAGCGAATCAGAAGATGATGACGTCAT
TGATGTAGTCATGGAAACAAGAAATAAAGATGGTCGTCATGGTAACTCTA
AACAAAGAGATGACAAGAAAATAGAAGCTCTGAGAGTGATGTTTCCAGAT
TTAGACATGCGCTCGTTACACGATCTCTATGAGGATTTTGACCAGGATGT
CCAGGCGGCTGTTGAATATATGTTATTCAAAAAGCGTAAAAACGAACAAG
AGGAATTCAAACTGAACAATCAGCAGCAATCATCAATCCTCACCACAACA
GATTCTAAGAGAAGTTTAATACATTCTCCAAAAACAACTACTTCATCTAA
CAACAAACCATATTATATTGACTCTCTAATCAGTAAATGTCAACCTAAAG
ACAACTCTGATACAAATATGAAAAGCAAAATATCAATTTCTTCGACTGCG
TAAAATCATTTACAGTAAATAGATAATTTTTTATAATATAAAGAATATTG
TATAAAAATTCTTGTTATCCTTGTAAATACTTTAAATAATACACCATTAA
ATTGACGAAATGGGTTCTTCCAGAAAATCTTTGTACATGGGGGGTGGAGG
ATATGTATGGTGGGGTGGAGGATATATTGGATATTTTGTCCGGGGGCAAT
GGAAAATCTGCAAAATTTGCCTTGTTTTGGGGACGAACTTGCTCTGATTA
GGGGTAATTTTGATTATCTTGGGGGGTCAACTGATGCTTATCCGGGGGGT
CAAAATTAACAATGTCCGGGGGTAAATGTGCAAAAAATATTATATCCTCC
ACCCCACATAATATATTTTTTTCTGAAAGAGCCCAATACCTGAGGGAACT
AGGCTCAGTTCACTTTACCATGTAGGGTTGATTGAGATTTGTGGCATACA
TTTATCCTACGGTACAGTTAGAATTGAGAAGGCTCCTCTGGACTGGACTA
TTTTCATCAAAGCTTAAATAAATCAACCTGCTAATTCGAACTGGAACGAG
AAGTCGAATTACAGAACGACTCGAATTTATGGAAAACATTGTACTAGGGT
TTCCCTTAGACCTAAATCAATTCTAGAAAGATTCAGATTAACTCGAGAGT
TCACTACACTTAGCATCGCCCTTTTTGTGGAAGTTCCCTCATAGCCCTCT
CCACATTGTAAAGGTTTTATGGAAAATTTCTCTCTTTAAAATTTAACGTA
AATATCAAACGTCATACTTGGGAATAGACCATGTTATTATATTTCTATGC
CTTTCGGGAAATATAATTCGATATTTTCTGAAACTAATGCAAATAGTTAT
ATTATTTTAATGTAAATAAGATATATAATAAATCATGACAAAAAC

Coding sequence (CDS) from alignment at scaffold_311:900798..916292-

>TCONS_00058554 ID=TCONS_00058554|Name=TCONS_00058554|organism=Clytia hemisphaerica|type=CDS|length=3717bp|location=Sequence derived from alignment at scaffold_311:900798..916292- (Clytia hemisphaerica)
GTCATCATGTCACTAACCGGTATTATCACCATAAACCAACATGGACTTCT
TACCAACCACCAACCCTCGCCAAAAACGGATCTCATCCTCCCTATCCTTC
CCCACCACGGAGAGGGGAGTACCCACACCACCACCATCATCATCAGCCCA
ATGTAGACAAACCAGGTCCAATCAGATACCACCATTCTCCTGTCTATCAC
TATCAACCCTACCCTGTGGCAAGGTACTTTCCCTACCATCAGCCACACTA
CCAGCATACTTCATGTCATTCCCCACCTAGGGACTCTATGAGATCATCAC
CTGCATCTCTCCCTGGAAGTTACATCGTCCCTTCCCCTCCTTCCATACAT
GATCGAAGAGACGTCTTCAGGCCGATTGTAATCGACCCACGGCGTGACGA
TGCCAGCGAATCAGAAGATGATGACGTCATTGATGTAGTCATGGAAACAA
GAAATAAAGATGGTCGTCATGGTAACTCTAAACAAAGAGATGACAAGAAA
ATAGAAGCTCTGAGAGTGATGTTTCCAGATTTAGACATGCGCTCGTTACA
CGATCTCTATGAGGATTTTGACCAGGATGTCCAGGCGGCTGTTGAATATA
TGTTATTCAAAAAGCGTAAAAACGAACAAGAGGAATTCAAACTGAACAAT
CAGCAGCAATCATCAATCCTCACCACAACAGATTCTAAGAGAAGTTTAAT
ACATTCTCCAAAAACAACTACTTCATCTAACAACAAACCATATTATATTG
ACTCTCTAATCAGTAAATGTCAACCTAAAGACAACTCTGATACAAATATG
AAAAGCAAAATATCAATTTCTTCGACTGCGTAAGACATAAAGAGAAATGT
GAATTCAAAGATTGCACATGCCGCTCATGCTTAGTTGTTGTTGAACGTCA
AAAGATCACGGCCGCCCGTGTGGCTCATCTACGCCAACAACGTAAAGTGG
CCGCCAAACGTGGGGTCGCTATTCCCAACCATAAATACTCACATTATAAC
CCGTTGACGGAGGAAGAAGAGTATATCTTATCTTCACCCTTGCAAAAGAA
AACCACAAGTGGAAAAATATCGCCAACCTATCACCAAGATGGGAATCGCA
GGAAAACTCGAAAACAAAAGCGTCCACATTCACCAAGATGGCGGATTGAG
TCATGTGATACATTTCAATGATGGTACAACAACACGGACACCGAAATGTG
CTCGATGTCGAAATCATGGCCTTGACCGAGAATTGAAAGGTCATCATGTC
ACTAACCGGTATTATCACCATAAACCAACATGGACTTCTTACCAACCACC
AACCCTCGCCAAAAACGGATCTCATCCTCCCTATCCTTCCCCACCACGGA
GAGGGGAGTACCCACACCACCACCATCATCATCAGCCCAATGTAGACAAA
CCAGGTCCAATCAGATACCACCATTCTCCTGTCTATCACTATCAACCCTA
CCCTGTGGCAAGGTACTTTCCCTACCATCAGCCACACTACCAGCATACTT
CATGTCATTCCCCACCTAGGGACTCTATGAGATCATCACCTGCATCTCTC
CCTGGAAGTTACATCGTCCCTTCCCCTCCTTCCATACATGATCGAAGAGA
CGTCTTCAGGCCGATTGTAATCGACCCACGGCGTGACGATGCCAGCGAAT
CAGAAGATGATGACGTCATTGATGTAGTCATGGAAACAAGAAATAAAGAT
GGTCGTCATGGTAACTCTAAACAAAGAGATGACAAGAAAATAGAAGCTCT
GAGAGTGATGTTTCCAGATTTAGACATGCGCTCGTTACACGATCTCTATG
AGGATTTTGACCAGGATGTCCAGGCGGCTGTTGAATATATGTTATTCAAA
AAGCGTAAAAACGAACAAGAGGAATTCAAACTGAACAATCAGCAGCAATC
ATCAATCCTCACCACAACAGATTCTAAGAGAAGTTTAATACATTCTCCAA
AAACAACTACTTCATCTAACAACAAACCATATTATATTGACTCTCTAATC
AGTAAATGTCAACCTAAAGACAACTCTGATACAAATATGAAAAGCAAAAT
ATCAATTTCTTCGACTGCGTAAGACATAAAGAGAAATGTGAATTCAAAGA
TTGCACATGCCGCTCATGCTTAGTTGTTGTTGAACGTCAAAAGATCACGG
CCGCCCGTGTGGCTCATCTACGCCAACAACGTAAAGTGGCCGCCAAACGT
GGGGTCGCTATTCCCAACCATAAATACTCACATTATAACCCGTTGACGGA
GGAAGAAGAGTATATCTTATCTTCACCCTTGCAAAAGAAAACCACAAGTG
GAAAAATATCGCCAACCTATCACCAAGATGGGAATCGCAGGAAAACTCGA
AAACAAAAGCGTCCACATTCACCAAGATGGCGGATTGAGTCATGTGATAC
ATTTCAATGATGGTACAACAACACGGACACCGAAATGTGCTCGATGTCGA
AATCATGGCCTTGACCGAGAATTGAAAGGTCATCATGTCACTAACCGGTA
TTATCACCATAAACCAACATGGACTTCTTACCAACCACCAACCCTCGCCA
AAAACGGATCTCATCCTCCCTATCCTTCCCCACCACGGAGAGGGGAGTAC
CCACACCACCACCATCATCATCAGCCCAATGTAGACAAACCAGGTCCAAT
CAGATACCACCATTCTCCTGTCTATCACTATCAACCCTACCCTGTGGCAA
GGTACTTTCCCTACCATCAGCCACACTACCAGCATACTTCATGTCATTCC
CCACCTAGGGACTCTATGAGATCATCACCTGCATCTCTCCCTGGAAGTTA
CATCGTCCCTTCCCCTCCTTCCATACATGATCGAAGAGACGTCTTCAGGC
CGATTGTAATCGACCCACGGCGTGACGATGCCAGCGAATCAGAAGATGAT
GACGTCATTGATGTAGTCATGGAAACAAGAAATAAAGATGGTCGTCATGG
TAACTCTAAACAAAGAGATGACAAGAAAATAGAAGCTCTGAGAGTGATGT
TTCCAGATTTAGACATGCGCTCGTTACACGATCTCTATGAGGATTTTGAC
CAGGATGTCCAGGCGGCTGTTGAATATATGTTATTCAAAAAGCGTAAAAA
CGAACAAGAGGAATTCAAACTGAACAATCAGCAGCAATCATCAATCCTCA
CCACAACAGATTCTAAGAGAAGTTTAATACATTCTCCAAAAACAACTACT
TCATCTAACAACAAACCATATTATATTGACTCTCTAATCAGTAAATGTCA
ACCTAAAGACAACTCTGATACAAATATGAAAAGCAAAATATCAATTTCTT
CGACTGCGTAAGACATAAAGAGAAATGTGAATTCAAAGATTGCACATGCC
GCTCATGCTTAGTTGTTGTTGAACGTCAAAAGATCACGGCCGCCCGTGTG
GCTCATCTACGCCAACAACGTAAAGTGGCCGCCAAACGTGGGGTCGCTAT
TCCCAACCATAAATACTCACATTATAACCCGTTGACGGAGGAAGAAGAGT
ATATCTTATCTTCACCCTTGCAAAAGAAAACCACAAGTGGAAAAATATCG
CCAACCTATCACCAAGATGGGAATCGCAGGAAAACTCGAAAACAAAAGCG
TCCACATTCACCAAGATGGCGGATTGAGTCATGTGATACATTTCAATGAT
GGTACAACAACACGGACACCGAAATGTGCTCGATGTCGAAATCATGGCCT
TGACCGAGAATTGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036882XLOC_036882Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058554-proteinTCONS_00058554-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058554-exon-scaffold_311-1575043694:916159..916292TCONS_00058554-exon-scaffold_311-1575043694:916159..916292Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1575043694:915450..915516TCONS_00058554-exon-scaffold_311-1575043694:915450..915516Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1575043694:915169..915240TCONS_00058554-exon-scaffold_311-1575043694:915169..915240Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1575043694:911982..912157TCONS_00058554-exon-scaffold_311-1575043694:911982..912157Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1575043694:903226..903431TCONS_00058554-exon-scaffold_311-1575043694:903226..903431Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1575043694:902759..903013TCONS_00058554-exon-scaffold_311-1575043694:902759..903013Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1575043694:900798..902522TCONS_00058554-exon-scaffold_311-1575043694:900798..902522Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1510915933:916159..916292TCONS_00058554-exon-scaffold_311-1510915933:916159..916292Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1510915933:915450..915516TCONS_00058554-exon-scaffold_311-1510915933:915450..915516Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1510915933:915169..915240TCONS_00058554-exon-scaffold_311-1510915933:915169..915240Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1510915933:911982..912157TCONS_00058554-exon-scaffold_311-1510915933:911982..912157Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1510915933:903226..903431TCONS_00058554-exon-scaffold_311-1510915933:903226..903431Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1510915933:902759..903013TCONS_00058554-exon-scaffold_311-1510915933:902759..903013Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1510915933:900798..902522TCONS_00058554-exon-scaffold_311-1510915933:900798..902522Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1491911889:916159..916292TCONS_00058554-exon-scaffold_311-1491911889:916159..916292Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1491911889:915450..915516TCONS_00058554-exon-scaffold_311-1491911889:915450..915516Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1491911889:915169..915240TCONS_00058554-exon-scaffold_311-1491911889:915169..915240Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1491911889:911982..912157TCONS_00058554-exon-scaffold_311-1491911889:911982..912157Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1491911889:903226..903431TCONS_00058554-exon-scaffold_311-1491911889:903226..903431Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1491911889:902759..903013TCONS_00058554-exon-scaffold_311-1491911889:902759..903013Clytia hemisphaericaexon
TCONS_00058554-exon-scaffold_311-1491911889:900798..902522TCONS_00058554-exon-scaffold_311-1491911889:900798..902522Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:900798..916292 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.26976	2.39175	0.92557	0.543315	3.74482	2.57135	2.94273	2.55816	1.51549	0.853261	1.90324	1.91868	1.3048	2.03257	1.20687	2.46427	1.11753	3.07276	1.39045	0.909322	1.10651	1.15654	2.81186	2.21553	8.6929	6.10974	0.636723	0.239251	1.08847	1.29418
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001275DM_DNA-bd
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
Blast
[Close]
BLAST of TCONS_00058554 vs. Swiss-Prot (Human)
Match: DMRT3 (Doublesex- and mab-3-related transcription factor 3 OS=Homo sapiens GN=DMRT3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.408e-17
Identity = 35/54 (64.81%), Postives = 43/54 (79.63%), Query Frame = 1 
Query:  601 RTPKCARCRNHGLDRELKGHKEKCEFKDCTCRSCLVVVERQKITAARVAHLRQQ 762
            RTPKCARCRNHG+   LKGHK  C FKDCTC  C++++ERQ++ AA+VA  RQQ
Sbjct:   25 RTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQ 78
The following BLAST results are available for this feature:
BLAST of TCONS_00058554 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DMRT32.408e-1764.81Doublesex- and mab-3-related transcription factor ... [more]
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