TCONS_00058563 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058563
Unique NameTCONS_00058563
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2341

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058563 ID=TCONS_00058563|Name=TCONS_00058563|organism=Clytia hemisphaerica|type=transcript|length=2341bp
ctttcactttcgctttcaaaATTCAGTCAcagtcaaaattcaaaaaacac
aATCAGACACCAGCCAGACAGACAGGCAACCAGGTATAAACAGGCAGCCA
TCAAGCTCAATCCAAATATGATACCACCACAGGAAAAGcTTCAAGGATTA
CTATACAACTGGACAGATGATTTACCACAATGTAAAGAAACAGGTGTTGG
ATACCAAACCAACCTTATCTACCGTGCTGGTGGTGGCATGGGCGCAACTA
CTGATTATGAAGACAGAAGTTTCCATTTTTCATGTCCTGGTGAATGTTTC
CTTTATGGTGTTTTAGACGGTAACGATGGGCCTATGGTGGCTGATTTTGC
TGGACAACGTTTACCAGCTGAACTGTTATTGGGTCAAATCAAAGAGGAGT
ACGGAGATAGGGAAGTGAAACAACGACTACGTGAAGCTTTTGATAGTGTT
TCCAAAGGATTCGTTGAAGATCTTATTGATGAACCATTGATGGAGAAAAT
GAACCTAGAAACACAGCTACCAGAGGGAATGAGCAAAAATGACGCACAGA
AGCGTTTTCCTGCACTATTTCAACGTTTGGAGCAATTAGAGAAGCGGATC
AAAGGAGGTTGTTCAGCTGCCATCGCACTGATTCATAAATCAAGATTATT
CGTTGCCAATGTAGGTGATGCAAGAGCATTGTTATGTCGAGTTGATCCGC
AAAATGAAGAGTTAGGAGTCATCCAGCTAAGTACTGATCACACTATCGCT
ACCAATTCTGAACTTCAACGGCTTGCTAATCTAGGCTTGAACATTGAACG
CTTGCAACAGATACCTATCGTTTTGAAAACAACAAGAAGTCTGGGCGATT
GGGCGCTCAAAGGCGGATATACATCACACCCTGATCTAAAGGAAGCAAGA
GAAGAACCAATTCTGTCGACTCCTTCTGTTCACGGCGGAGAAGATATctt
gaaaaacatgaaatttcttGTTTTAATGTCCAGAGGTGTTTACATTGCTT
ATGAACAAGCCACTGGTATACCCAAAGACCAAGTCAACGCTCACATTGCC
AACCTGATATACAATGAGATTTTGAAGCAAACCACCATCGAGAATGTGGC
TCAATGTGTTATTGATCACATTTGTCGCATNCGCTTTAGTAtatggtact
taagcgctcggccgcccacgctaagaagctctaacagagttatccaattt
aatttaatcgcaatcaaactcatcgaacacaatcgtaatcgaacgaaatc
gaggATTAATCCAACgcaattgacaatcaatcgaaccaatcgaacatagt
caacaatcaatcgaaccaatctaaccttactcgaacgcaatcgaacacaa
tcgaacacaatcgaataNATATACAATGAGATTTTGAAGCAAACCACCAT
CGAGAATGTGGCTCAATGTGTTATTGATCACATTTGTCGCATCCATAAAG
AACAATTCACAAAATCTGGTAATGTTACCTGTTTAAGACGTGAAGATATG
ACATTGCTGATTCGATTGTTCAATATCAAAGTTGGTCAAACccCATCACC
AAATGTACCAAGGCGTCAAGCTCGACCCAATCTTACTCCCCTcaaaatgc
cggaaaaacgtCGTACACCATCGCCGACAAGCAAGCCGGATACTCCGTCA
TCTACCGGAAGTTCTACTTCTACTCCAGCGACTGCCACACCCGGTAGCGC
GGGTAGTGCGACCACTTCTCCACAGTGGGGTTTCCCTGGAGGAAATCAGA
TGAATAATCCGCGATCGCCCTCCCCACTTACGGTAACTTTTACAGAACAA
CAAGCTCGGCCACAACCACTAGCTGCGCCTGCGCTGCCACCACGGCAGGG
TGTCGCCCCACCTCCAGTTAAAGCCGCATGGGCGGCGCCACGATCTAACG
AACGTAATGATAGCCAAAATTCAATGGACGATAAAACGAAAATGTTTAAT
AGACCAGCAGAACCTTTAGAAACTGACGCAGAAGGTCGTATTAAGGCTTA
TGTATCTTTTGACGAATTTAATGAAAAGATTATGGCTGCTGGAGGGCCGG
AAGAAGTTTTCCGAGACTTTTTATGCAGATGATAAAAAAGTGAAATCGAA
GAGGAATAGATATTGGACGGACCATTCTCGAAAATTCACTATATCGGCAA
CGACATGACAAATTGACAATTGCAGGttttaataaaacaatttttcaaga
aattggaATTGAATTACTATGGAAAGGATGATGTTTGCTGGACAGAAtca
ttcttcaaaataaatgaattatttttcctttATAGGTTATACCTAATTAT
GCATTTTGGAAATTAAACTTAATCTTGAGTGTATAATAGAT
Run BLAST on NCBI

transcript from alignment at scaffold_311:1041939..1054152-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058563 ID=TCONS_00058563|Name=TCONS_00058563|organism=Clytia hemisphaerica|type=transcript|length=12214bp|location=Sequence derived from alignment at scaffold_311:1041939..1054152- (Clytia hemisphaerica)
CTTTCACTTTCGCTTTCAAAATTCAGTCACAGTCAAAATTCAAAAAACAC
AATCAGACACCAGCCAGACAGACAGGCAACCAGGTATAAACAGGCAGCCA
TCAAGCTCAATCCAAATATGATACCACCACAGGAAAAGGTAAAATCCATC
TTTTGATATTTGTGTGAGTTTTTAATGCAACAAGATAATTGTCATTTACA
TTTGGCTAGTTAGTTTTAGGTTTTCTATTCTTCCGCCCTTCAAATGACAA
ATGCAGTTTTTCGCCTTTGATATCATTGAGCTACCGTGAAGTCAGGTAGC
TTGCTGTTTGAGGTCTGGCAAAATTTCTAGGAAAAAGTTTATCTGGCGGT
GCAGTGATTTAATTGGGTTCTGTCTCCCCCTAGATCTTTTTCTTGGGAAG
TTGTTGTTCTTCAAGTTATTTTTCAAGGTTGGCTTGGCTCAAATTTTTTC
TTCTACGGCTCAAAATTTAGGTAATATCTCATAGTTTTTGAAAATGTTAA
TTTCATTTAAAAAACACTGATTAATTTTTCCATGAATCCCTTTAGAAGTT
CTGCAGCGCTTTTTTTTTTGCTTGCGAGTCAATTAAACAATATACCGTGA
GATCGGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGA
ATGACCTGGTTGGTCATTAAAATATAAAATTAAATCAAAACAAACCTGAT
TTACAATATATTTACGAGTGGTAAAATATATTTCTTCTAATCATAAGTGA
TGTCATGAATACTTATGTTTAATATCATTATTAAATTTGAGGTAACATGT
CCAGCAGCCATCGAGAAACACCTGACTTCCCGCAATCTTAAAATTTATGA
TCTCGTATGATTTTTTATTAACCAACCACACTGTTTTATTTACCCACAAT
TCTGTCACGGCAAATATGAGATTCTAAAATGGTAGTGTAGAGTTGTGAGC
AATGCTGTGTTGTTTTGAAATTTTGCTGCTTTGATTGGTCAGTCATTTGA
TGGCTATGCAAGTTTCCCTCCACTGATGAAGTTACCTGACTTCACGGTAG
TGCTTTCACAGCATTAATCTTTGATACGCATTTCGACAGGACGCTAGTGT
GAATGACTGAATGAATATTTTCATTCAATCTTTGACCAATTGATAGTCAA
TAGAAAAGTCAAAAGTGCTTTTTTTATTTGGTAGCATGAGTATACATTAT
GTTTGTTCTGACAGTTAATGAAAAATGTGGCTTTTAACAATTTGATATAT
CACTGTAATGTTTTGAATTATTTCACAATTTTTTAGCTTCAAGGATTACT
ATACAACTGGACAGATGATTTACCACAATGTAAAGAAACAGGTGTTGGAT
ACCAAACCAACCTTATCTACCGTGCTGGTGGTGGCATGGGCGCAACTACT
GATTATGAAGACAGAAGTTTCCATTTTTCATGTCCTGGTGAATGTTTCCT
TTATGGTGTTTTAGACGGTAACGATGGGCCTATGGTGGCTGATTTTGCTG
GACAACGTTTACCAGCTGAACTGTTATTGGGTCAAATCAAAGGTTTGAAA
AATACAGTTCATTCTGTCTTCACTTCACTTAATCTCCTTCCCTTTATCAA
TCAGGTATAAAATTCTAGCCTTCTAACCTTTTAAAAAAGCCTTCCCTTTA
TCTTTCAAAATATTACTTTGTCTCTTGTGAGAAAAATTGATCAAGTAATG
TTAAATATAACACCAAACTAGAAAGGGCGCCATAAGGTTACTTTGCCTTA
TGTTTTGAGTGAATGTGTCAATTAGCAAACATTTTACATTATCAATATCA
AGAATTTGTAATTTCAAAAATTGCTATAGTTTGCAGACGTGGATGTAGTC
TAGTATGCTAAACTACTATTTCAGACTTTAGAAAATGAACAAAAAATAAC
CGAGTTTACCAACTGTAGTTTGTACAAATTATTATTTTCCCGTAACAATT
ATCGTATTAGCATATTAAACAGCTTCAGTCTATGGATGTTGCTAAAACTT
TGTTTTACTGATTTTATTTGATTTTATTTCACAGAGGAGTACGGAGATAG
GGAAGTGAAACAACGACTACGTGAAGCTTTTGATAGTGTTTCCAAAGGAT
TCGTTGAAGATCTTATTGATGAACCATTGATGGAGAAAATGAACCTAGAA
ACACAGCTACCAGAGGTTTGTATCCTTTAGAACTCTTATTGGGCATTTTT
TATCCTCCCAGCTTTCTGAAAGACACCTATTCTTAGATATCTAGACACCT
AGGGTTACTTTACATGTTCATTACATTGTATGGATTCACGGAGTGGGGGA
TGAATAAGTTGTAGGCGGTCACAAGTGTTTGTAACATGTAAATGATGTAT
GTTCAAACTGGAAATTGAAATTGAAAAGATACTAAGATATTGATCACAAG
GAAAAAACTTAAGTCTAAAGTATAAACTAAAGTATAAAGTATATTAAGCC
TGTTTAAATGTATAAATTTTAATATTGATAGATGATATTGATTGAATATT
AGTAGTTGAAATGAAGTAAGCTAGTTCTAGCCTAATCTTATTAATGCCTC
ATGATGCAAAAGCATCAAGAAAGAGAAAAAAACAAAATGGTCGACAAAAA
AAAAATGTCTGAAAAAACTTACCAGCTTGCCTGAAGTGTGAGGCTGGAAT
AATCCAGCCAGTGTGGTGTGATGAAATTTAAAAAAATAAACTTATGTTGA
TAAGAGAAAAGTTGAAGTTGGACTTGATTTGATGTTCACTCCATGAAATT
TCTTGTTGAACTGATGTGAAAATGAAAGTTCTTGCTAAAATAGCAAACTC
TAGGAAATTTGTAATTTACAGTATGATAAATTCTAGGCCATAGGTCAAAG
TTGATAAATGAGAATGTATAAATTACTGACCAAACCTAAAAATTGGAAAA
ATGTATGTTTTGAATAAATTAACATAAATAAACAAATAGAATCCAAAATG
GTGAACCAGAGGAATGTAAAGAGATGGAAAACAGCTTTTCTGATTACTCA
AAGTTCAACGATCACTTCTATGGAAAATTCTATTGTAAAAACGTTGATTA
GGTCATTAAATGAAAGTCCAGAAAAGACGGCTCGCCTTACAAATCGGACG
GTTTCTACATGATTTGACGATAAAAATGAAAATTAGTTTTTCCTTTTTTG
CCGATTACTAGTTCAATTTTTAAGAATAAGGAGCAATATTTTTACCAATG
TATAACAAAAGAAATTCCTTAACGCAATGATATTGAATTGGTTCTTGTAA
AACTGTCAGAAGTCGAGTAAAATCAAGATGAAGTTATAATTTTATCGAGC
TCTAGCTTTCCATATTATGGTGCGGTCATGATGCGGTTATATCAGTAGAA
TCGCTAGGAAAGTCTGAGCAAGAAGATATAGGTACCTTTTCGTATAGGAG
AGATGTACCCAAAAATTTTGTGCATAATCAGGCTTAAAACAAAAGAATTT
TGTCACAACACGCTAATTATGCAGATTTTTATAGCGACAACAAAAGAAAC
CTATTTACTCGACATAAACTCCCTTAAGGGCAAGAGACCTGGTATATGAC
GAGCCGTTTTTCCATTGTTTTCAAGGAGCTGTTTTTCCATCTCTTTACAT
TCCTCTGGGTGAACACTGAAAACAGAAAAACACTGAAAAACGAGAAACAC
GGAAAACCTGAACAAAAATGTGAGGGAATGCCAAAAATGATGAAAAAGAC
ACTGAACTGAAAAGGCTTAGCTTTGATGGTTGCTACGGGGCTGTTTCTTT
GTATTTTTAACAATAGTTTTATAATGATAATGAAAATAATAAAATAATTA
TTTCCAACAATAAAAAATTTTGGAGTATATTTGGAAACTTTTAAGTTCCA
AATTTTTGTTTTTCTTTTCTTTCCTTTCAAATTTATGTCTAATTATGAAG
ATTCTCGGCACCAAACCTAAAGGAAATTATTAAGAGGACCTAGATCCATT
GCTGAAACTTTACTGAAAACTTTTTGGTGGTATTAAGCAGTCTGGCTGGA
AAACCGTGCTAAAAATATCTAGACAGAATTGACAGAATGTGAACTTACTT
TATAGCCCCAAAAAAAGTTTCGATCACTAATTTTAATATTTTTCAACTGA
AATTTTGTTTGCAGGGAATGAGCAAAAATGACGCACAGAAGCGTTTTCCT
GCACTATTTCAACGTTTGGAGCAATTAGAGAAGCGGATCAAAGGAGGTTG
TTCAGCTGCCATCGCACTGATTCATAAATCAAGGTTTGTTTCTTGTAGGA
TCTGATATGCTTTGAATTGGTCAGTAAAATCAGTTTGAAAATCCAGGGTG
GTCAGTAATAACGAGGTCGAAAATCCAGGGTGGTCCAAAGAAATGGGAGA
AAAAGATCCAAGGGGGTCCTGAAAAATTGGAAAATCCAAGGAAAAAAAAA
ATCTCCTCAACATAGGGGTACAATTTTTTTCTGGAATAGCCCATTTCATC
AACTCATAACAACCTCACTAGAATAGAATGCAAAATATTCGAGTATGTTA
AGCTCAAAGCTCGATGATTTTTTAGCATTCTCGTAAAAAGCAGTCTTATG
CTCGCTTACCCGAGCCTCACTGGCGAGTCATGGGAAGAATGGACCACGTG
TCTGCGGATAGAAATAATAAGGATAATGAACTTTTAAAGTAAAAAAAAAA
AAGAAATAGTTCTTCCGAATGATTGAAATGTCGTCGAAAGCCAACAACCT
TAAGATATAGTTAATCTGATATTATTCAACACTGTCCAGATTTGAAGAAA
GGTTGTTTTTAATATATCACCCTGGAGAATATGAATAAATAAATAAGGCG
TAACGGTAAACTTGTGGAAATTGATAGAAAAGATCTTTATTCTTTGTTTT
TCAGATTATTCGTTGCCAATGTAGGTGATGCAAGAGCATTGTTATGTCGA
GTTGATCCGCAAAATGAAGAGTTAGGAGTCATCCAGGTAAAATTATTTTC
GAGTATTTATTTAATCATTATGGTGGCTTTATAGAAGATTTCTTCGTTCT
CAAAATCACGTATTCAACATTTTTTTAAATTTTTCTTCTTTTTCATAGCT
AAGTACTGATCACACTATCGCTACCAATTCTGAACTTCAACGGCTTGCTA
ATCTAGGCTTGAACATTGAACGCTTGCAACAGATACCTATCGTTTTGAAA
ACAACAAGAAGTCTGGGCGATTGGGCGCTCAAAGGCGGATATACATCACA
CCCTGATCTAAAGTATTTTTCATTGACCTTCTTTTTATCCTTCTTCTAGT
TTGTACATTAACATCTTTCAGACGAGTGTTTTTCGGTAATTATTATCTTC
ATATCCAAACAAATAACTGATATAATTTCCGATTTTACGATGATATTTAC
TACCTTTAAGGGAAAAATCTTTGGTGGGAACTTTTTGGGGATGACCGAAA
GTTTTTTCAGAAGGAATTCAATTTGGTGGATGGCTTGAACAATTTAATTT
GGCGGATGAAGGATATTTCCGGCCAAAAAACGTTATTGAATAAGAAAAAA
CCTGTTTAAAGGCCTGGAATATCTAACCCTTTTGCAATGAACACAATCAT
TTAAATTCTGTGTGAATTTAATTTGGCGGATGGTTAGAAAAACTAATTTG
GGGAAAACTTAATTTGGCGGATTTTGACCAGATCTGCCAAATTTTCTTCC
GGTCAAATTTTTTTATCTTAAGGGTATAGTGTTTCAATTTATTATAGGGA
AGCAAGAGAAGAACCAATTCTGTCGACTCCTTCTGTTCACGGCGGAGAAG
ATATCTTGAAAAACATGAAATTTCTTGTTTTAATGTCCAGAGGTGTTTAC
ATTGCTTATGAACAAGCCACTGGTATACCCAAAGACCAAGTAAGAAGTAT
CATTATTATAATTATTATATTATATACAGTACCTGTTAACCTTTTTCATC
TACAATAATTCTTGACGTTACTCACGACCGTATAATAATAGATGCGATAT
AACACGGCCAAAAATATGCTTCAATGCAGTATTTTACAATTTTCGACGTC
AGTTCTTGCTAGAAATGGTTTAGTTTCCTATATTTTCTGACGCTTACTTT
GAGTTTAAATGTCAATATCTACCTTAAGGGAACTTATTTTGGCGGGAACT
AATTTTGGCGAGCGGCGAAAATCTTAAAAGAATTTAATTTTGGCGGGAAC
TTATTTTGGTGAATAGGGATTTTTTTTAATTTTGGCGGGAACTAATTTTG
GCGAATGACAGCGTAAATCTGTTCTATTTTGCCTTATTTTGAGCAATTTT
GANTAATTTAATTTTGGCGGGAACTTATTTTGGCGAATAGGGATTTTTTT
TGATTTTGGCGGGAACTAATTTTGGCGAATGACAGCGTAAATCTGTTCTA
TTTTGCCTTATTTTGAGCAATTTTGATGAATTTCAGGGGTTATTTAGACA
AGGAAACAAAAAATTTAATTTTGGTGGGAACTTATTTTGGCGAGTGAGCA
AAATATTTAATTTTGGCGGGAACTCGCCAAAATTAGTTCCCGCCAAAATA
AGTTCCCTTAAGGTAATGAAAGGACATGTAATATCTGCCTATTATTGTTA
AGTGTAGCGTGCAGTAGTCATAAACTGCAGTAACCCAGTCTCTGGCAAGT
TACCTACAGATACTTAGCATGCTTGCTGAATGTTGGAAAATTATCCATGT
CCGTGTCTTTAGTTTTATTTATCTATTTGACAAGGGGTAAAGTTTTATGG
CTGCATTATTTGCCATTGTTGGGTTTATGTGACATGCGAAATTTGAATCT
TTACGTTTTTCGTTGTCGAGTTTAATCCGATATAAATTATAAAGTTGCTC
CTAAAGGTTGAAATGGAATTAAATTTTCAAGCTCCTGGGTCTTTCGTGTG
GGTAAAGCTTTTATTGCAGAAACAAATTTACATAATGATTTTGTATTAAA
AGGTTTGGTCATTTTGGATTTTTTCTGGACCATATGCAGTTGGTCAAAAT
AAGTTATTTGGATTACAAATGGACCAGTGAAACCCACTGGTCCACAATTT
AACCAAGGATACCGTCAACTGCATGTGATCCTTTTTTCTTCCCATTTAGC
ATATACCCAACATTGGCACGGAAAGGGTTTAAGTAAGATAGAGCGTTCTC
TACTGCATAAAGTGTACTTAAGGGCTCTGACCATAGTGAATTTTTCATAA
TTGCCGTGTTTAAAATGTGTTTTCTGACTGATGTAACCAACAAAACTATG
GCATGTTATACATTTTCTGTTAGACAAACTATTCCTGAATCTGAAAATTT
AAAAATTGCATTGAAAAAATTTGATGAAAAATAAAATGAAGACTTTTGCG
AGGAAGAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGAAAAACAT
TTTGAAAATTTTTTCGCACTAGATGGTGTATCTTTAACCGAACAATGAAA
ATTTTTGTGGAAAATTTTTGTAAATGCTTCTTTGTCTCGATATCTTCAAA
ATAGTGGTTTTTCATCAATTTTTCATCTGGATTTTGCTTAAAAAAACANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGATTAAAAAGCAT
TTTATAAAGGCAATTCTTTGTTAAAAGAGCTAAAGAATCTAAAACATAAC
TTTTATGTTCAGATACTAAAATCAATTTTCTGACTATGGTCAGAGCCCTT
AACTGGTTTCTTAGACCTGCAAAATGTTGATATTAATTCCAAATTCCGAA
CTATTATTTTAAAATAATATGTAATAATTATGAATTTTAACTAAAAAACT
GGTTTTGTCTTTCAGACGAATTTTTTTTTTTGGCACCACAATAAATCGGA
GCGTAATTACGACCTTGTTTCTATTCTTTTTCCCCGAAAGCTTTTCTTAC
GAAATTTACAGTCTGGGAGAAATTTCACAATTTCGATTATACATAACCAG
ACGGTGTCAATCGAACGAATCGAACGCCGAATCAATCGAACGCAATTGAA
CGCAATCGAATAATTGCAATTCGATTGTCGAACGCAATCGAATNCAGTGG
GTAGAGCATTCGTCTTACAATCTAAGGGTTGTCGATTCGTTCCCCGGGCG
TCGCCAACTCAACGAATTAGTAGCTCAGATTGGGTAATCTGATTTAGGCG
GTAGGTTACTGTGAGCTGAAAGTAGGTGTGTCAGCATTTGATCTTCCAAG
TCTAGCGCAAATAGAAAATGGAATACACTCCCTCATTCCTGGCTTCGCCG
ACAGCCAACAGATGAATTGGGGCGCTTATTCGAGGATTTACGGAGATATA
CTTACTTACTTACTTACTTCTTTCCAGGTCAACGCTCACATTGCCAACCT
GATATACAATGAGATTTTGAAGCAAACCACCATCGAGAATGTGGCTCAAT
GTGTTATTGATCACATTTGTCGCATNCGCTTTAGTATATGGTACTTAAGC
GCTCGGCCGCCCACGCTAAGAAGCTCTAACAGAGTTATCCAATTTAATTT
AATCGCAATCAAACTCATCGAACACAATCGTAATCGAACGAAATCGAGGA
TTAATCCAACGCAATTGACAATCAATCGAACCAATCGAACATAGTCAACA
ATCAATCGAACCAATCTAACCTTACTCGAACGCAATCGAACACAATCGAA
CACAATCGAATANATATACAATGAGATTTTGAAGCAAACCACCATCGAGA
ATGTGGCTCAATGTGTTATTGATCACATTTGTCGCATCCATAAAGAACAA
TTCACAAAATCTGGTAATGTTACCTGTTTAAGACGTGAAGATATGACATT
GCTGATTCGATTGTTCAATATCAAAGTTGGTCAAACGTAAGTCTGTGATA
AAGATTACGTCATCTCCTTATTAGAATCTAATAAACAATGAGCTCTATAC
TCTGAATAGATTCTCGATCCTAGGCTACGTCATATTTTCCTTCGTTTTGA
GCGTAAAACTCCTACACTTTGGGATATGCGCACTGCTCTTGTTTTGAATA
TTGAATTTATCCGGAAACATCGCATGCGCACTGAGGTTTTGATGAAACAA
TAGAGAGTTTCGAAACCTAAGCCTATCATCAACGGTGTTTTAAACATTCC
TTTATTTTAAATCTCTATTGATAGACTTATTTTGTTTAAAATTTCTATTA
ATCCCATTAAAAAGCGAATTCCCGCCCATAGCAGTGCCTATAACAGTGCA
AGAGTAAGGCCTAAAATTCTGGAGCTGTCTATTGTGTAGACTACTCGATC
CTGGCCAAGCTAACATTTTGATCGGAGTTTTTTGAAAGTAGTACCTTAAT
GGTAGTCAATACTTGTGAAATTATTTTTAAACGAGAAATTCCATTTAATT
GTAAATTGACGCACATCAATAAGTGCTACCATTAGAATGCCACTTTTAAA
AGACTCTGATCAAAGATTTTGATCACCCGGGATCGAGAAACTTAATAGTA
TAAAGGTCAGTGTTTATTAATACAATAATGACCGGTTAGTGAGGGCTGCA
CTAATACAATATTAACTGTTTTGGAGGGCCGTACGGGAAAATATTTCCCG
AGGGCGCAAGTAACGACCGAGCTTGCGAGGTTGTTGCGTTGACCGAGGGC
AATATTTTCAGTACAGCCCGAAAAAACCGGTCATTATTGTATTTGTTAAT
CGTTTCCTTCAGCTTCGATTGATTTTTAGCGCTTTATCCAGGAAAAATAG
CGAAATAATGCGAAAAAAACAAGCAAAAAGAGATAAAAAATTGTTATAAT
TTCTGACTTCAGAAATAAAAAATGAGAGAAATGATGTCAACGCATTGTTC
AATTTCCTTTGAAAAAGTGACGTCACAATGAATTTTCCTAACGACCGGCA
ACTCTGGACAATGTAGGCCCGTCGTCATGCGAAAAGAACCAATTGCATTG
CGCAAAAAGTCGTAGCCCGCTTTGAAAAAGTAACCGGTTAGCAATAGATT
ATAATAAAACTATGATGAAATATGGATGATATAGCTTGGTCCAGGGTATA
TAGAGGTCAATACGCATAAACCTGAAAAAAATGTTTGCAGATAAATTGAG
TTGAAATTTTATTAAATTACGTATCCAAAATAAGTTCAAAATGATCTTCC
CATCGTGTCCGAAAACAAAGCTTGAAGCTTGTGTACCGATTTCAGTGCTG
AGTAATTTGTCGTATTTCTACTAGACTGGAGTCGTTTATAATGCATGTAA
TACTAATAATAAACACAAATAATGATATGGGATTTAGTTTGTATAAACGA
CTGGAAGAATCCGGTGTTCCAGCCTTATAGATACCGGGCCTAGCTACGCA
GAAACTTGCGTAGCGAAAAAACAATTTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNATTTATCAAGCAACAACAAACTCTCAAAATAAAATCAACTCAAATG
AAACATTTTTAACACACAAATCCACACACATTTTATTTTCAAGAACTTTT
TTTGAGCAGGAAAAAAATTTAATTGCGATATTGACACTTTTTTTTTTGTT
TAGAGTTAGTGCACAAAGGTTTCTAGACGACTAAAATTTACTTTTTTGCT
TTATTTCTAATATGTCTGAATTAGTCGTCTAGCTTGCTAGACTATATTTC
TACTTAAAAACCATCTCGTTTTCAGACCATCAAACTCTCTAGAAAAAAAC
AATTGTATTGAGTTAATTTTTTCAAGTCAAAAATATTGCAAAATCTTCTG
GATTTAATTTCGCGATTTGGCATTTTGAAGAATTTTGCGTGGATTTTATT
TCGCGAATCGGATAAAAATGGCCCTGAAAACATCAATAATTTTTATAAAA
CAGTATATTTACAGAATATATTAATCTATAAATCTGATTCTTAAAATTTC
GCGTCAATTTCATTTTTCGAATCATCTTGCTCGTCTATCAGGGTATAATA
TATTGAAATGATACGCGGCCCCCTCGATGCTCTGAATAATAAAGATTACT
GAAAAAATGAGTTTTAATAGTCGCTGAGACTCAAAATATAATGTTTAACC
TCCATAGAGTAAAAACTTTATAGAATTTCCTAGTTTTGAAATAATTGAAA
TTTGATTTTTTCAGCCCATCACCAAATGTACCAAGGCGTCAAGCTCGACC
CAATCTTACTCCCCTCAAAATGCCGGAAAAACGTCGTACACCATCGCCGA
CAAGCAAGCCGGATACTCCGTCATCTACCGGAAGTTCTACTTCTACTCCA
GCGACTGCCACACCCGGTAGCGCGGGTAGTGCGACCACTTCTCCACAGTG
GGGTTTCCCTGGAGGAAATCAGATGAATAATCCGCGATCGCCCTCCCCAC
TTACGGTAACTTTTACAGAACAACAAGCTCGGCCACAACCACTAGCTGCG
CCTGCGCTGCCACCACGGCAGGGTGTCGCCCCACCTCCAGTTAAAGCCGC
ATGGGCGGCGCCACGATCTAACGAACGTAATGATAGCCAAAATTCAATGG
ACGATAAAACGAAAATGTTTAATAGACCAGCAGAACCTTTAGAAACTGAC
GCAGAAGGTCGTATTAAGGCTTATGTATCTTTTGACGAATTTAATGAAAA
GATTATGGCTGCTGGAGGGCCGGAAGAAGTTTTCCGAGACTTTTTATGCA
GATGATAAAAAAGTGAAATCGAAGAGGAATAGATATTGGACGGACCATTC
TCGAAAATTCACTATATCGGCAACGACATGACAAATTGACAATTGCAGGT
TTTAATAAAACAATTTTTCAAGAAATTGGAATTGAATTACTATGGAAAGG
ATGATGTTTGCTGGACAGAATCATTCTTCAAAATAAATGAATTATTTTTC
CTTTATAGGTTATACCTAATTATGCATTTTGGAAATTAAACTTAATCTTG
AGTGTATAATAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036887XLOC_036887Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058563-exon-scaffold_311-1575043694:1054015..1054152TCONS_00058563-exon-scaffold_311-1575043694:1054015..1054152Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1575043694:1052611..1052866TCONS_00058563-exon-scaffold_311-1575043694:1052611..1052866Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1575043694:1051988..1052118TCONS_00058563-exon-scaffold_311-1575043694:1051988..1052118Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1575043694:1049920..1050038TCONS_00058563-exon-scaffold_311-1575043694:1049920..1050038Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1575043694:1049217..1049298TCONS_00058563-exon-scaffold_311-1575043694:1049217..1049298Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1575043694:1048941..1049104TCONS_00058563-exon-scaffold_311-1575043694:1048941..1049104Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1575043694:1048314..1048455TCONS_00058563-exon-scaffold_311-1575043694:1048314..1048455Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1575043694:1045067..1045575TCONS_00058563-exon-scaffold_311-1575043694:1045067..1045575Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1575043694:1041939..1042738TCONS_00058563-exon-scaffold_311-1575043694:1041939..1042738Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1054015..1054152TCONS_00058563-exon-scaffold_311-1510915933:1054015..1054152Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1052611..1052866TCONS_00058563-exon-scaffold_311-1510915933:1052611..1052866Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1051988..1052118TCONS_00058563-exon-scaffold_311-1510915933:1051988..1052118Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1049920..1050038TCONS_00058563-exon-scaffold_311-1510915933:1049920..1050038Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1049217..1049298TCONS_00058563-exon-scaffold_311-1510915933:1049217..1049298Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1048941..1049104TCONS_00058563-exon-scaffold_311-1510915933:1048941..1049104Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1048314..1048455TCONS_00058563-exon-scaffold_311-1510915933:1048314..1048455Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1045067..1045575TCONS_00058563-exon-scaffold_311-1510915933:1045067..1045575Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1510915933:1041939..1042738TCONS_00058563-exon-scaffold_311-1510915933:1041939..1042738Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1054015..1054152TCONS_00058563-exon-scaffold_311-1491911889:1054015..1054152Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1052611..1052866TCONS_00058563-exon-scaffold_311-1491911889:1052611..1052866Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1051988..1052118TCONS_00058563-exon-scaffold_311-1491911889:1051988..1052118Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1049920..1050038TCONS_00058563-exon-scaffold_311-1491911889:1049920..1050038Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1049217..1049298TCONS_00058563-exon-scaffold_311-1491911889:1049217..1049298Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1048941..1049104TCONS_00058563-exon-scaffold_311-1491911889:1048941..1049104Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1048314..1048455TCONS_00058563-exon-scaffold_311-1491911889:1048314..1048455Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1045067..1045575TCONS_00058563-exon-scaffold_311-1491911889:1045067..1045575Clytia hemisphaericaexon
TCONS_00058563-exon-scaffold_311-1491911889:1041939..1042738TCONS_00058563-exon-scaffold_311-1491911889:1041939..1042738Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1041939..1054152 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.83429	3.07924	3.73357	5.6603	7.11221	4.69597	7.32081	7.0933	2.96973	6.18219	3.63643	4.69797	3.58958	2.1247	7.24758	5.69919	3.87497	5.12291	4.94858	3.34918	5.30236	5.20253	1.00345	2.26467	3.19178	4.37663	3.96803	5.34	2.08625	2.14745
Blast
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BLAST of TCONS_00058563 vs. Swiss-Prot (Human)
Match: TAB1 (TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Homo sapiens GN=TAB1 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 2.594e-73
Identity = 136/326 (41.72%), Postives = 199/326 (61.04%), Query Frame = 1 
Query:  157 NWTDDLPQCKETGVGYQTNLIYRAGGGMGATTDYEDRSFHFSCPGECFLYGVLDGNDGPMVADFAGQRLPAELLLGQIKEEYGDREVKQRLREAFDSVSKGFVEDLIDEPLMEKMNLETQLPEGMSKNDAQKRFPALFQRLEQLEKRIKGGCSAAIALIHKSRLFVANVGDARALLCRVDPQNEELGVIQLSTDHTIATNSELQRLANLGLNIERLQQIPIVL--KTTRSLGDWALKGGYTSHPDLKEAREEPILSTPSVHGGEDILKNMKFLVLMSRGVYIAYEQATGIPKDQVNAHIANLIYNEILKQTTIENVAQCVIDHICR 1128
            +WTDDLP C  +GVG  +N  Y A G    +   ED    F     CFLYGV +G DG  V +F  QRL AELLLGQ+  E+ + +V++ L +AFD V + F+E  ID+ L EK +L++QLPEG+ ++    ++  + +RL+ LE+ I GG  A +A++  ++L+VANVG  RALLC+     + L V QL+ DHT     EL RL+ LGL+  +++Q+ I+   ++TR +GD+ +K GYT    L  A+ +PI++ P +HG + +     FLVLMS G+Y A E A G    Q N  IA +I  E  KQT+++ VAQ V+D + R
Sbjct:   16 SWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES-IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCK--STVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHG--PGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKR 336
The following BLAST results are available for this feature:
BLAST of TCONS_00058563 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAB12.594e-7341.72TGF-beta-activated kinase 1 and MAP3K7-binding pro... [more]
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