TCONS_00058674 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058674
Unique NameTCONS_00058674
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058674 ID=TCONS_00058674|Name=TCONS_00058674|organism=Clytia hemisphaerica|type=transcript|length=2559bp
TGCTTTTCGACTCAATCAATCTTCATATCTACAAAATTATACAAATAAAg
cttgattttcaaattcttgAAATTCTCATGGCACTTAAAATTGTCTCAAT
CATTCCTGGCATGTGTTTGCTGTTAGTTTTCGTCAGGAGCTCTGAACTTC
CATGGGGCGGTGTCCAGACcaagaaaatccaaaatgttACAATCACCTTT
GAGCAATTCAAATTTGTGGGCCAAAATCGATTTATGGGATTTCACACCAA
ATTTAAAGGAGTTACGAGATCAGAATGCGCTGAAGCTTGCTCAACTAACA
CGAAAGGTTGTTGGACTTGGATATGGAATGCACAAAATGGAAATTGTTTC
ATTGCCAAATCAACCTTCTTTGCCGATGATGCTGAATCTgctcttcattt
ttttatgcCCGCTTATTTCTTGTATGAAAGAATTAGCCCATGTAATCAAA
ACGTATTATTATGTGAGCATGGAAGCCAATGTGTGCCAAACCATGAAAGC
AAGACATATAAATGCGTCAACTGTTTGTCACCGTATAATGGAAAACACTG
TAATGAATCAAATACAGAAACTCAATCACCTTCCCTTCATCAAGACATCT
TACTTGGTCAAAACCAGTCATGCTTGGCTTTGCATTTGAATTTTGGAGTC
AAAAATGGAACTTTCTGGATACACCCAtggaaagatgaaaagaaaattaa
agtttatTGCTCTGACAAAGGTCACACACAGGTTTCACATATCAGAGAAA
ATTCAACCACAAGCGACCTTACAGAGTTACACATAagagatttccaaaat
ggtttAGATCTACATTCAATGGGCAACTATCGTGCTATGACATCATTTTT
GGTGACTTTGGAACAGGTCATCAAATACGACTTCTTTTACTTCAGTTTGA
ATGCTGGAAACAAAACGTATGATTTTCACATTGAAGATAACAGTGTTCAA
AAATGCTATAAACATTTGGAGTATTACTTGGGCTTGACAAGAGAACCAGG
AACCAGACCGGACTGCTTGTTTATTCAAACTTTCGATCGAAATGCAACTA
TCCCTCAATGGCCTACTTCAGATGTTTCACCTGAAGAACGTTTGTATAAA
GACTTACTATTGACCGATGATAACCAACAACGAATCACTTTTGTGAACGG
TAGAATGGAATGTTTTGGGGAGCCTTGCTCCTTTCAAATAAGCGTTCGGT
AGATATACATGTCATAACCTTATTGTTAAATCAGGATAAACCCCGGTTTA
TCAAGGCTGCACTCgaggaaaaatttggaaataccaaGTTTCGCATTGGA
AGAACGTACCTGATAGATTTTGGTCTGGATAAGGTGCACATATACCTCGG
AAACTcacccaaaaaaacaacaaaaaatgctaaaattagCTGCACTTTAG
GAAAAAATAGCTGAACTCTGCACTTGAGGTTAAAAAACCACCCTCTCACA
CTATTAGTCataccatagtcattataaaaaactatgGTCTTACTTTATCT
ACCCTTGTTTTATCTTTGTCGGATGTCCGAAAACAGTGGAACAGgatttg
tataaataaaaatccTTATATGAATATACCCCTTATCTGCCAATCCTAGT
CCCCCCGGGGGAAAACTCGGACCTGCATCGACTCTCCGACTGACATTAAA
AGAGACTGTAATTAGTGCTGTTAATTCATTTATCAACTTTTCATTCTCAG
TATAAAACGCAAAGACTATATCTAAAAATTGAACATTTCAATTAAATAAT
AACATATTTACagattcaaaacaaacaaattttaaaCTAAAATATTATAA
TTCAAATCAATTCAAGCAATTCTGTAAAAAAGATAGTTGTCAggcgaaaa
aaaagaaaaaagtagtGTTTCCAAAAACCGGCCgggtaaaaacaaaattt
tttctgaCCCCGCCGCGACTTCGTTAGTAGTACATtacagggcttacttc
atactgtttattgtacataaaagttatctttaaagttatattttaatgat
cttaagttaaaaaaaagatcttttctggccggccgcattagagctttttt
ccttcatccgcattccggaaacacaatatttctttattttcgccTCGTTA
ATAAATagcatataaaaaaaattattgtaaataaatcaattaattaactt
aacattttgctttaaattatataaaaacattACTTACCATAACActaaat
acacctttcccgtaattcaaatttctcagaaatggcccgggaaaatgtgc
gctccaccgttgtgtataaaattgtttgggaggtaaaaaacgcgtttttg
cccgcgaggggttagggaatgTGGGATTTGAGCCNTCAGATTATTTGAAA
CAAGGGTGAACTTTTATACCTGTGTTCATGGTTTGATCTTCAATGCTATC
CATCATATTTTCTTCCCATACGttaaaaatttgccttgtcaAGTCATGTT
GATCTTTAGTCCGTGGTAATAGTTTACCAAGATGTTGCATCAAGGCAATG
AACCATTCTTGCTCTTTTTTGGAATTAATAGTTGCTGTATGACAGCAACG
CTGAACAAG
Run BLAST on NCBI

protein sequence of TCONS_00058674-protein

>TCONS_00058674-protein ID=TCONS_00058674-protein|Name=TCONS_00058674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
LFDSINLHIYKIIQIKLDFQILEILMALKIVSIIPGMCLLLVFVRSSELP
WGGVQTKKIQNVTITFEQFKFVGQNRFMGFHTKFKGVTRSECAEACSTNT
KGCWTWIWNAQNGNCFIAKSTFFADDAESALHFFMPAYFLYERISPCNQN
VLLCEHGSQCVPNHESKTYKCVNCLSPYNGKHCNESNTETQSPSLHQDIL
LGQNQSCLALHLNFGVKNGTFWIHPWKDEKKIKVYCSDKGHTQVSHIREN
STTSDLTELHIRDFQNGLDLHSMGNYRAMTSFLVTLEQVIKYDFFYFSLN
AGNKTYDFHIEDNSVQKCYKHLEYYLGLTREPGTRPDCLFIQTFDRNATI
PQWPTSDVSPEERLYKDLLLTDDNQQRITFVNGRMECFGEPCSFQISVR
Run BLAST on NCBI

transcript from alignment at scaffold_312:186586..195069-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058674 ID=TCONS_00058674|Name=TCONS_00058674|organism=Clytia hemisphaerica|type=transcript|length=8484bp|location=Sequence derived from alignment at scaffold_312:186586..195069- (Clytia hemisphaerica)
TGCTTTTCGACTCAATCAATCTTCATATCTACAAAATTATACAAATAAAG
CTTGATTTTCAAATTCTTGAAATTCTCATGGCACTTAAAATTGTCTCAAT
CATTCCTGGCATGTGTTTGCTGTTAGTTTTCGTCAGGAGCTCTGAACTTC
CATGGGGCGGTGTCCAGACCAAGAAAATCCAAAATGTTACAATCACCTTT
GAGCAATTCAAATTTGTGGGCCAAAATCGATTTATGGGATTTCACACCAA
ATTTAAAGGAGTTACGAGATCAGAATGCGCTGAAGCTTGCTCAACTAACA
CGAAAGGTAATTTCACAAATTTCAAAATCATCTCATGCTTACTGATAGCG
AAAGATAATAATGAAGTTAAGCAAATCAGTAAAATCACGACGACGGACGA
AAATTTAACAGGCTAGTGAGTTTCAACCAATCAAATCTCGTATTTCCACT
AGCCTATTGCATTTTTCGCCCGTCGTCGTGATTGTCCTGGTATGCTTAAC
CTCATTAATATTCTCTGGTGTTAATTATTAACGTAAATAAAGCCTTGGAT
ACACGGGATCGAGGTTGGTAATTTCACTAATTTCAAAATCATCTCATTGA
AATTCAAATGAACTTACACGTTTTTTTATAACAACACCCAAAATTTTTGA
GGCCTCCCGATCTTCTTAACTTTTGAGTTTTAAGCCTAAAAATGTTCTTA
ACATGTTCTTTTTTCACCATTTTCCTAAGAAAAAGGGTGTTTTCGAGTCC
ACAAAGCTTTACAATGTTCTCAACTTGTTCTTAACATTTTGGCCATCGAA
GCTTTATGTTCTTATAAAGTTTAGTCTCATAAAAAACGTGTATTTTGTCG
CTCGGCAAAAATCTTGATGACATTTTTTAATTTGCTTTAATTTTTGCGAC
TGGCTGGAATTTTAACTTCAGGGGAACTAATTTTGGCGTGTAGGAAGTCT
TTGTTGATTGATACCGAAGAAAGTCGAAAAGTAAACTTTTTTGAAGGTTG
TTGGACTTGGATATGGAATGCACAAAATGGAAATTGTTTCATTGCCAAAT
CAACCTTCTTTGCCGATGATGCTGAATCTGCTCTTCATTTTTTTATGCCC
GCTTATTTCTTGTATGAAAGAATTGTAAGTTTTTTTCTCCTTACATTAAT
TATGGGTGTATGCCTTATACCTGCATACAAAAAGTTTTAGAATCTTAATG
CCCCTCGAGCTCCCCTCTTAACATCAAGATTTCTATAAAGTTTGTTCGTA
AATACACTGCTTGGGTCCCAGCCCCAGTGGAGAATTTGGCAAACATTTCG
TCCCTGGTGGGAAGAAAACCCTAGAGTTTCAGCCCCACTGAGAAATTGAC
TTTGATTTCATCCCCATTTGAAATTCATTGTTTAAAAATTGTACTCCAAA
ACCATCCCCACTGGACTTTTTAACCTTGGAACAATAGAATTTTTATTCCC
GGGGCTGTGAGACAGGGGTGTGTAAATTTGCAATGTTTTAAATTATCAAA
ACATATCAAAAACTTATATCCAAAGGCTTAAATTTACAATTTTTTGGATA
AATATTTGTTCTTGCATTGGGAAATACGTAAACAATTATTAAATGTCAAA
TAATTAGGGGTCTAAAAAGGGTTTCTGAGATAAACAAATTCGATTCAATA
ATTTTGACTAAAATCAAGCACAAAATAGTATATTTTTTCACTTCAGAGCC
CATGTAATCAAAACGTATTATTATGTGAGCATGGAAGCCAATGTGTGCCA
AACCATGAAAGCAAGACATATAAATGCGTCAACTGTTTGTCACCGTATAA
TGGAAAACACTGTAATGAATCAAATACAGGTATGATGTCATCAGTTCAAA
ACAACCAAGGTGTTTTTTTATTGACGACTTAGGCTAGCTGGATTAATGAA
TGACATTAATGTAATTTTTCATAAAAGGATGAATAGCCCAAACTATTCAT
ATGATTAATAATTTTTGGATGAAAAGAGATGGTTGCACGTTAATTCTTTC
TTTTCAGAAAAATATTGTTCCAAAGCAACACATGAGAAAAACCGTTGAAT
CTTATGTCTGTTATGTATTGTTCACGCATTTTCTAATCCNNTGATTAGGT
CATTAAATAAAAGTCCAGAAAAGACGGCTCGCCATACAAATCGGACGGTT
TCTACATGATTTGACGATAAAAATGAAAATTTGTTTTTCCTTTATTGCCG
ATTACTAGTTCAATTTTTAAGAATAAGGAGCAATATTCTTACCATGTATA
GCAAAAGAAATTCTTAACGCAATGATATTAAATTGGTTCTTGTAAAACTG
TCAGAAGTCGAGTAAAATCAAGATGAAGTTATAATGTTCTCGAGCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATT
ATGGTGCGGTCATGATGCAGTTATATCAGTAGAATCGCTAGGAAATTCTG
AGCAAGAAGATATAGGTACCTTTTCGTATAGGAGAGGTGTACCCAACATA
TAAGCCCTAAAAGTTTGCGCATAATCAGGATTGAAACAAAAGAATTTTGT
CACAACACACTAATTATGCAGATTTTTTATATTTATAGTGACAACAAAAA
AAAGCCTATTTACTCGACATAAACTCCCTTAAGGGCAAGAGACCTGGTAT
ATGACAAGCCGTTTTTCCATTGTTTTCAAGAAGCTGTTTTCCATCTCTTT
ACATTCCTTTGAATCCACTAATACATGGTCGATACAAAAGAGCGAGGATA
GGCGGATCAGGAAATCAAGATCAACAAAAGATTTGCTGTGGGAGATGAAA
TCATTTTTTACAAAAGAAAACACAAACGTGAAACCATCTCTTTTCATCCA
CAACTTATGTTATATGAATAGTTTTGGGCTATTCAGCGTTTTATTACATG
TTCTGTTAATCCTGATAGCTTAAGCCGCCAGTGGAAAAACACCCCCATAG
CCGGTATAAAGAACCCTGGTCTGGAAGCTTATTGTTGTAACTTTTTGTTA
ACTTTTTCCTTTGTTAATGACGATTATAAAAATCGATTTGCTCAGTTTTT
GATCACGTTACCAATTACTCCTCTTGAGATTGGTTCAAAAGTTGATCACA
TGATCAAAAACTGAGCAAACCAAACTAATTTCTAAATGCAAGTATAGAAA
GACACAAAAGGTATCCAGACTGGGATTGCATCTAGCGGTTTCTTTGTTTT
TGAGGACTGCATTTTGTGAAATCTAGCGATAGATTTTACTTTCAATCCGG
CGTTTGTGTAAAAATCACGCGCGGGGCGTTCTGGATGAGAAATAAGTGGC
CTCATTTCCCTTCCAGGAGTATTGAGTCTAGCCCTTCGAGCTTGGAAATC
AATGAATCGTGCTATTTCCATTGTATTTCTTAATCGATTCTCTTCTAGAT
GTAAACCTATCCTAAACCTTCAATATACCAGGCCAGTCTCACAAGAAAAT
CTACAAAATAAGTAGATGTATAAATTTTCTTAATTCTACGGACGTCTGTA
GAATTACGGCACTCTTTAATATCGACATATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATA
ATTCTACCCGTAAATCTACAGACATCTGTAGAAATTTTAAATTTACACCA
TCTACGTATTCTGTAGAATTATGTGTGATAATGTGTTGAATATACATATA
CAATATACATCTTGTTTTTTTAGAAACTCAATCACCTTCCCTTCATCAAG
GTGAATTTCTTTCTAATGGTAGCTACGAGAGTTCTGGATTCTGGAGACTA
CATACAGCCAGGTGACGGTGGGTCCCGGAGGGAGGGAGTATAACGTCATA
ATAATTGAAATTAAAAGAAACTATAACAATTTACTTCTAGAACGTAGAGT
TTTAACTCCTAGGGAGGACCTGACCTAACAAGTTAAAGATAATTTTTAAC
TAACGCAGGGTATTGATGGTCTTCCGTTTTTTATCTCAGAATGAAAAAGC
TCAAAAATGTTCCATAAATCTGAGAATATAGCCACTGAAAGTCCTCCAAA
ATCGAATTATTCAATGAAATAAAGTGGAAGTACTGAAATCGCATTTTTCG
TCCGAATTTTAAATTCTGAAAAACGTTAAAGTACACAAAATATTACCTTA
AAAGAAGAAATTTTGACAGAAAGAAAATTTGGCGGATTTGGCCAGAATCC
GCCAAATTAAGTTCCCGCCAAAAAAAATTTTTCCGCCATCCGCCAAATTT
AACTTTTTGAAAATATGATCTCTTTTAAGGTGTTTCTGCATTTTTTTTGC
TGTTTTTACGCCATTTTAAGGATAAGTTTTTCAGTAAACGCCAAATTAAA
TTCCCGCCAAATTTTGTTTTCTCGTCCATCCGCCAAATTGAATTCCCTCT
ATAAAACTTTTTCGGCCATCCGCCAAATTAAATTCCCGCCAAAATTTCTT
CCTTTAAGGTAGTATAATATATTTAGACGTTGATTTAAGGTCCTCCATGT
TATTCAGGTTTGTGAATATTTTTCAACCCCTTGCTAGTTTGATTATTCAT
TTCATGTTCTGTTAGACATCTTACTTGGTCAAAACCAGTCATGCTTGGCT
TTGCATTTGAATTTTGGAGTCAAAAATGGAACTTTCTGGATACACCCATG
GAAAGATGAAAAGAAAATTAAAGTTTATTGCTCTGGTAAGAACACCCGTG
ATGTCTCACAGCCCTATTGGAACTTTTTTCCTCAGTTGGGATAACAATTT
CAATTGAAATCCCAATGGGGATAGAAATTCTTTTGTTCCAAGGTTAAAAT
ATACAACGGGGATGGGTTTGGAGTGCAATTTTTAAACACTGATGAAATCA
AAGTCAATTTCCCAGAGGGGCAGAAATTCCAGGGTATTTTCCCACCGGGA
CAAAGTTTTATCCAAATTTCCAGTGGGTCTAAGATTTTTTTATTTTCATT
CATTTACGGTGTGTCCCAAAAAAAGTGGACAAATTTTTACATGAACTGAA
ATCCCCAAACTTTATTATCAAAACCTAGCTTAGAATAAGTGAAGGAAAAT
TCTCTGTATCAATAGATATTCAATTCTCAAGATGATTTAATAGGTTTTGG
AGATTATATACAATTTTCGCATAAATGTCAAAGACAGTAGTCAGTAGCGT
AGCCAAGAGGGGCGCAAAATTTGTGTAGGAGAGCAGTTTTTATGGCAATG
TAATTTTCTATTCACGGTATTAATACAGTGATAAAAAAAATATGCTCTCC
TACACTAATTTTGCGCCTCTCTTGGCTACGCTACTGACTGGTAGTTACAT
ATATTATGTTATAAAATTTGGAATCTTTTATTCCTTTTTCACTCAAGTTC
ATTTGCAANTTTCAGAATTGTTAGAATTTCAATCCAAACCATGAGATTAA
CCAGGAATCCCATGCTTGTTTTCGTGAAATTCTGGAAAAATTACCCTTGG
TCAAATTTCAAAAACTTTCAAAATTGACCTCGGGAAATTTATCCCAAATT
TCCCTCGTAACCATGAGATTACTAGTACAAATCCCGATGGGGATAGAAAT
TCTTTTGTTCCAAGGTTAAAGTATACAATGGGGATGGTTTTGGAAAACTC
ATTATCTAAACTTAGTTTGAAAATTTAAATTCTCTGTTCAATAAATAAAT
TTTCAAGTCATAAATGTTGCAAAATAAATTTAAAATTTTTATCCCTTTTT
TTACTCCAGTTCATTTTACAACATTTTCCTTCATTTCAGACAAAGGTCAC
ACACAGGTTTCACATATCAGAGAAAATTCAACCACAAGCGACCTTACAGA
GTTACACATAAGAGATTTCCAAAATGGTTTAGATCTACATTCAATGGGCA
ACTATCGTGCTATGACATCATTTTTGGTGACTTTGGAACAGGTCATCAAA
TACGACTTCTTTTACTTCAGTTTGAATGCTGGAAACAAAACGTATGATTT
TCACATTGAAGATAACAGTGTTCAAAAATGCTATAAACATTTGGAGTATT
ACTTGGGCTTGACAAGAGAACCAGGAACCAGACCGGACTGCTTGTTTATT
CAAACTTTCGATCGAAATGCAACTATCCCTCAATGGCCTACTTCAGATGT
TTCACCTGAAGAACGTTTGTATAAAGACTTACTATTGACCGATGATAACC
AACAACGAATCACTTTTGTGAACGGTAGAATGGAATGTTTTGGGGAGCCT
TGCTCCTTTCAAATAAGCGTTCGGTAGATATACATGTCATAACCTTATTG
TTAAATCAGGATAAACCCCGGTTTATCAAGGCTGCACTCGAGGAAAAATT
TGGAAATACCAAGTTTCGCATTGGAAGAACGTACCTGATAGATTTTGGTC
TGGATAAGGTGCACATATACCTCGGAAACTCACCCAAAAAAACAACAAAA
AATGCTAAAATTAGCTGCACTTTAGGAAAAAATAGCTGAACTCTGCACTT
GAGGTTAAAAAACCACCCTCTCACACTATTAGTCATACCATAGTCATTAT
AAAAAACTATGGTCTTACTTTATCTACCCTTGTTTTATCTTTGTCGGATG
TCCGAAAACAGTGGAACAGGATTTGTATAAATAAAAATCCTTATATGAAT
ATACCCCTTATCTGCCAATCCTAGTCCCCCCGGGGGAAAACTCGGACCTG
CATCGACTCTCCGACTGACATTAAAAGAGACTGTAATTAGTGCTGTTAAT
TCATTTATCAACTTTTCATTCTCAGTATAAAACGCAAAGACTATATCTAA
AAATTGAACATTTCAATTAAATAATAACATATTTACAGATTCAAAACAAA
CAAATTTTAAACTAAAATATTATAATTCAAATCAATTCAAGCAATTCTGT
AAAAAAGATAGTTGTCAGGCGAAAAAAAAGAAAAAAGTAGTGTTTCCAAA
AACCGGCCGGGTAAAAACAAAATTTTTTCTGACCCCGCCGCGACTTCGTT
AGTAGTACATTACAGGGCTTACTTCATACTGTTTATTGTACATAAAAGTT
ATCTTTAAAGTTATATTTTAATGATCTTAAGTTAAAAAAAAGATCTTTTC
TGGCCGGCCGCATTAGAGCTTTTTTCCTTCATCCGCATTCCGGAAACACA
ATATTTCTTTATTTTCGCCTCGTTAATAAATAGCATATAAAAAAAATTAT
TGTAAATAAATCAATTAATTAACTTAACATTTTGCTTTAAATTATATAAA
AACATTACTTACCATAACACTAAATACACCTTTCCCGTAATTCAAATTTC
TCAGAAATGGCCCGGGAAAATGTGCGCTCCACCGTTGTGTATAAAATTGT
TTGGGAGGTAAAAAACGCGTTTTTGCCCGCGAGGGGTTAGGGAATGTGGG
ATTTGAGCCNTCAGATTATTTGAAACAAGGGTGAACTTTTATACCTGTGT
TCATGGTTTGATCTTCAATGCTATCCATCATATTTTCTTCCCATACGTTA
AAAATTTGCCTTGTCAAGTCATGTTGATCTTTAGTCCGTGGTAATAGTTT
ACCAAGATGTTGCATCAAGGCAATGAACCATTCTTGCTCTTTTTTGGAAT
TAATAGTTGCTGTATGACAGCAACGCTGAACAAG

Coding sequence (CDS) from alignment at scaffold_312:186586..195069-

>TCONS_00058674 ID=TCONS_00058674|Name=TCONS_00058674|organism=Clytia hemisphaerica|type=CDS|length=7200bp|location=Sequence derived from alignment at scaffold_312:186586..195069- (Clytia hemisphaerica)
ACAAAGGTCACACACAGGTTTCACATATCAGAGAAAATTCAACCACAAGC
GACCTTACAGAGTTACACATAAGAGATTTCCAAAATGGTTTAGATCTACA
TTCAATGGGCAACTATCGTGCTATGACATCATTTTTGGTGACTTTGGAAC
AGGTCATCAAATACGACTTCTTTTACTTCAGTTTGAATGCTGGAAACAAA
ACGTATGATTTTCACATTGAAGATAACAGTGTTCAAAAATGCTATAAACA
TTTGGAGTATTACTTGGGCTTGACAAGAGAACCAGGAACCAGACCGGACT
GCTTGTTTATTCAAACTTTCGATCGAAATGCAACTATCCCTCAATGGCCT
ACTTCAGATGTTTCACCTGAAGAACGTTTGTATAAAGACTTACTATTGAC
CGATGATAACCAACAACGAATCACTTTTGTGAACGGTAGAATGGAATGTT
TTGGGGAGCCTTGCTCCTTTCAAATAAGCGTTCGGTAGACATCTTACTTG
GTCAAAACCAGTCATGCTTGGCTTTGCATTTGAATTTTGGAGTCAAAAAT
GGAACTTTCTGGATACACCCATGGAAAGATGAAAAGAAAATTAAAGTTTA
TTGCTCTGAAACTCAATCACCTTCCCTTCATCAAGAGCCCATGTAATCAA
AACGTATTATTATGTGAGCATGGAAGCCAATGTGTGCCAAACCATGAAAG
CAAGACATATAAATGCGTCAACTGTTTGTCACCGTATAATGGAAAACACT
GTAATGAATCAAATACAGGTTGTTGGACTTGGATATGGAATGCACAAAAT
GGAAATTGTTTCATTGCCAAATCAACCTTCTTTGCCGATGATGCTGAATC
TGCTCTTCATTTTTTTATGCCCGCTTATTTCTTGTATGAAAGAATTCTTT
TCGACTCAATCAATCTTCATATCTACAAAATTATACAAATAAAGCTTGAT
TTTCAAATTCTTGAAATTCTCATGGCACTTAAAATTGTCTCAATCATTCC
TGGCATGTGTTTGCTGTTAGTTTTCGTCAGGAGCTCTGAACTTCCATGGG
GCGGTGTCCAGACCAAGAAAATCCAAAATGTTACAATCACCTTTGAGCAA
TTCAAATTTGTGGGCCAAAATCGATTTATGGGATTTCACACCAAATTTAA
AGGAGTTACGAGATCAGAATGCGCTGAAGCTTGCTCAACTAACACGAAAG
ACAAAGGTCACACACAGGTTTCACATATCAGAGAAAATTCAACCACAAGC
GACCTTACAGAGTTACACATAAGAGATTTCCAAAATGGTTTAGATCTACA
TTCAATGGGCAACTATCGTGCTATGACATCATTTTTGGTGACTTTGGAAC
AGGTCATCAAATACGACTTCTTTTACTTCAGTTTGAATGCTGGAAACAAA
ACGTATGATTTTCACATTGAAGATAACAGTGTTCAAAAATGCTATAAACA
TTTGGAGTATTACTTGGGCTTGACAAGAGAACCAGGAACCAGACCGGACT
GCTTGTTTATTCAAACTTTCGATCGAAATGCAACTATCCCTCAATGGCCT
ACTTCAGATGTTTCACCTGAAGAACGTTTGTATAAAGACTTACTATTGAC
CGATGATAACCAACAACGAATCACTTTTGTGAACGGTAGAATGGAATGTT
TTGGGGAGCCTTGCTCCTTTCAAATAAGCGTTCGGTAGACATCTTACTTG
GTCAAAACCAGTCATGCTTGGCTTTGCATTTGAATTTTGGAGTCAAAAAT
GGAACTTTCTGGATACACCCATGGAAAGATGAAAAGAAAATTAAAGTTTA
TTGCTCTGAAACTCAATCACCTTCCCTTCATCAAGAGCCCATGTAATCAA
AACGTATTATTATGTGAGCATGGAAGCCAATGTGTGCCAAACCATGAAAG
CAAGACATATAAATGCGTCAACTGTTTGTCACCGTATAATGGAAAACACT
GTAATGAATCAAATACAGGTTGTTGGACTTGGATATGGAATGCACAAAAT
GGAAATTGTTTCATTGCCAAATCAACCTTCTTTGCCGATGATGCTGAATC
TGCTCTTCATTTTTTTATGCCCGCTTATTTCTTGTATGAAAGAATTCTTT
TCGACTCAATCAATCTTCATATCTACAAAATTATACAAATAAAGCTTGAT
TTTCAAATTCTTGAAATTCTCATGGCACTTAAAATTGTCTCAATCATTCC
TGGCATGTGTTTGCTGTTAGTTTTCGTCAGGAGCTCTGAACTTCCATGGG
GCGGTGTCCAGACCAAGAAAATCCAAAATGTTACAATCACCTTTGAGCAA
TTCAAATTTGTGGGCCAAAATCGATTTATGGGATTTCACACCAAATTTAA
AGGAGTTACGAGATCAGAATGCGCTGAAGCTTGCTCAACTAACACGAAAG
ACAAAGGTCACACACAGGTTTCACATATCAGAGAAAATTCAACCACAAGC
GACCTTACAGAGTTACACATAAGAGATTTCCAAAATGGTTTAGATCTACA
TTCAATGGGCAACTATCGTGCTATGACATCATTTTTGGTGACTTTGGAAC
AGGTCATCAAATACGACTTCTTTTACTTCAGTTTGAATGCTGGAAACAAA
ACGTATGATTTTCACATTGAAGATAACAGTGTTCAAAAATGCTATAAACA
TTTGGAGTATTACTTGGGCTTGACAAGAGAACCAGGAACCAGACCGGACT
GCTTGTTTATTCAAACTTTCGATCGAAATGCAACTATCCCTCAATGGCCT
ACTTCAGATGTTTCACCTGAAGAACGTTTGTATAAAGACTTACTATTGAC
CGATGATAACCAACAACGAATCACTTTTGTGAACGGTAGAATGGAATGTT
TTGGGGAGCCTTGCTCCTTTCAAATAAGCGTTCGGTAGACATCTTACTTG
GTCAAAACCAGTCATGCTTGGCTTTGCATTTGAATTTTGGAGTCAAAAAT
GGAACTTTCTGGATACACCCATGGAAAGATGAAAAGAAAATTAAAGTTTA
TTGCTCTGAAACTCAATCACCTTCCCTTCATCAAGAGCCCATGTAATCAA
AACGTATTATTATGTGAGCATGGAAGCCAATGTGTGCCAAACCATGAAAG
CAAGACATATAAATGCGTCAACTGTTTGTCACCGTATAATGGAAAACACT
GTAATGAATCAAATACAGGTTGTTGGACTTGGATATGGAATGCACAAAAT
GGAAATTGTTTCATTGCCAAATCAACCTTCTTTGCCGATGATGCTGAATC
TGCTCTTCATTTTTTTATGCCCGCTTATTTCTTGTATGAAAGAATTCTTT
TCGACTCAATCAATCTTCATATCTACAAAATTATACAAATAAAGCTTGAT
TTTCAAATTCTTGAAATTCTCATGGCACTTAAAATTGTCTCAATCATTCC
TGGCATGTGTTTGCTGTTAGTTTTCGTCAGGAGCTCTGAACTTCCATGGG
GCGGTGTCCAGACCAAGAAAATCCAAAATGTTACAATCACCTTTGAGCAA
TTCAAATTTGTGGGCCAAAATCGATTTATGGGATTTCACACCAAATTTAA
AGGAGTTACGAGATCAGAATGCGCTGAAGCTTGCTCAACTAACACGAAAG
ACAAAGGTCACACACAGGTTTCACATATCAGAGAAAATTCAACCACAAGC
GACCTTACAGAGTTACACATAAGAGATTTCCAAAATGGTTTAGATCTACA
TTCAATGGGCAACTATCGTGCTATGACATCATTTTTGGTGACTTTGGAAC
AGGTCATCAAATACGACTTCTTTTACTTCAGTTTGAATGCTGGAAACAAA
ACGTATGATTTTCACATTGAAGATAACAGTGTTCAAAAATGCTATAAACA
TTTGGAGTATTACTTGGGCTTGACAAGAGAACCAGGAACCAGACCGGACT
GCTTGTTTATTCAAACTTTCGATCGAAATGCAACTATCCCTCAATGGCCT
ACTTCAGATGTTTCACCTGAAGAACGTTTGTATAAAGACTTACTATTGAC
CGATGATAACCAACAACGAATCACTTTTGTGAACGGTAGAATGGAATGTT
TTGGGGAGCCTTGCTCCTTTCAAATAAGCGTTCGGTAGACATCTTACTTG
GTCAAAACCAGTCATGCTTGGCTTTGCATTTGAATTTTGGAGTCAAAAAT
GGAACTTTCTGGATACACCCATGGAAAGATGAAAAGAAAATTAAAGTTTA
TTGCTCTGAAACTCAATCACCTTCCCTTCATCAAGAGCCCATGTAATCAA
AACGTATTATTATGTGAGCATGGAAGCCAATGTGTGCCAAACCATGAAAG
CAAGACATATAAATGCGTCAACTGTTTGTCACCGTATAATGGAAAACACT
GTAATGAATCAAATACAGGTTGTTGGACTTGGATATGGAATGCACAAAAT
GGAAATTGTTTCATTGCCAAATCAACCTTCTTTGCCGATGATGCTGAATC
TGCTCTTCATTTTTTTATGCCCGCTTATTTCTTGTATGAAAGAATTCTTT
TCGACTCAATCAATCTTCATATCTACAAAATTATACAAATAAAGCTTGAT
TTTCAAATTCTTGAAATTCTCATGGCACTTAAAATTGTCTCAATCATTCC
TGGCATGTGTTTGCTGTTAGTTTTCGTCAGGAGCTCTGAACTTCCATGGG
GCGGTGTCCAGACCAAGAAAATCCAAAATGTTACAATCACCTTTGAGCAA
TTCAAATTTGTGGGCCAAAATCGATTTATGGGATTTCACACCAAATTTAA
AGGAGTTACGAGATCAGAATGCGCTGAAGCTTGCTCAACTAACACGAAAG
ACAAAGGTCACACACAGGTTTCACATATCAGAGAAAATTCAACCACAAGC
GACCTTACAGAGTTACACATAAGAGATTTCCAAAATGGTTTAGATCTACA
TTCAATGGGCAACTATCGTGCTATGACATCATTTTTGGTGACTTTGGAAC
AGGTCATCAAATACGACTTCTTTTACTTCAGTTTGAATGCTGGAAACAAA
ACGTATGATTTTCACATTGAAGATAACAGTGTTCAAAAATGCTATAAACA
TTTGGAGTATTACTTGGGCTTGACAAGAGAACCAGGAACCAGACCGGACT
GCTTGTTTATTCAAACTTTCGATCGAAATGCAACTATCCCTCAATGGCCT
ACTTCAGATGTTTCACCTGAAGAACGTTTGTATAAAGACTTACTATTGAC
CGATGATAACCAACAACGAATCACTTTTGTGAACGGTAGAATGGAATGTT
TTGGGGAGCCTTGCTCCTTTCAAATAAGCGTTCGGTAGACATCTTACTTG
GTCAAAACCAGTCATGCTTGGCTTTGCATTTGAATTTTGGAGTCAAAAAT
GGAACTTTCTGGATACACCCATGGAAAGATGAAAAGAAAATTAAAGTTTA
TTGCTCTGAAACTCAATCACCTTCCCTTCATCAAGAGCCCATGTAATCAA
AACGTATTATTATGTGAGCATGGAAGCCAATGTGTGCCAAACCATGAAAG
CAAGACATATAAATGCGTCAACTGTTTGTCACCGTATAATGGAAAACACT
GTAATGAATCAAATACAGGTTGTTGGACTTGGATATGGAATGCACAAAAT
GGAAATTGTTTCATTGCCAAATCAACCTTCTTTGCCGATGATGCTGAATC
TGCTCTTCATTTTTTTATGCCCGCTTATTTCTTGTATGAAAGAATTCTTT
TCGACTCAATCAATCTTCATATCTACAAAATTATACAAATAAAGCTTGAT
TTTCAAATTCTTGAAATTCTCATGGCACTTAAAATTGTCTCAATCATTCC
TGGCATGTGTTTGCTGTTAGTTTTCGTCAGGAGCTCTGAACTTCCATGGG
GCGGTGTCCAGACCAAGAAAATCCAAAATGTTACAATCACCTTTGAGCAA
TTCAAATTTGTGGGCCAAAATCGATTTATGGGATTTCACACCAAATTTAA
AGGAGTTACGAGATCAGAATGCGCTGAAGCTTGCTCAACTAACACGAAAG
ACAAAGGTCACACACAGGTTTCACATATCAGAGAAAATTCAACCACAAGC
GACCTTACAGAGTTACACATAAGAGATTTCCAAAATGGTTTAGATCTACA
TTCAATGGGCAACTATCGTGCTATGACATCATTTTTGGTGACTTTGGAAC
AGGTCATCAAATACGACTTCTTTTACTTCAGTTTGAATGCTGGAAACAAA
ACGTATGATTTTCACATTGAAGATAACAGTGTTCAAAAATGCTATAAACA
TTTGGAGTATTACTTGGGCTTGACAAGAGAACCAGGAACCAGACCGGACT
GCTTGTTTATTCAAACTTTCGATCGAAATGCAACTATCCCTCAATGGCCT
ACTTCAGATGTTTCACCTGAAGAACGTTTGTATAAAGACTTACTATTGAC
CGATGATAACCAACAACGAATCACTTTTGTGAACGGTAGAATGGAATGTT
TTGGGGAGCCTTGCTCCTTTCAAATAAGCGTTCGGTAGACATCTTACTTG
GTCAAAACCAGTCATGCTTGGCTTTGCATTTGAATTTTGGAGTCAAAAAT
GGAACTTTCTGGATACACCCATGGAAAGATGAAAAGAAAATTAAAGTTTA
TTGCTCTGAAACTCAATCACCTTCCCTTCATCAAGAGCCCATGTAATCAA
AACGTATTATTATGTGAGCATGGAAGCCAATGTGTGCCAAACCATGAAAG
CAAGACATATAAATGCGTCAACTGTTTGTCACCGTATAATGGAAAACACT
GTAATGAATCAAATACAGGTTGTTGGACTTGGATATGGAATGCACAAAAT
GGAAATTGTTTCATTGCCAAATCAACCTTCTTTGCCGATGATGCTGAATC
TGCTCTTCATTTTTTTATGCCCGCTTATTTCTTGTATGAAAGAATTCTTT
TCGACTCAATCAATCTTCATATCTACAAAATTATACAAATAAAGCTTGAT
TTTCAAATTCTTGAAATTCTCATGGCACTTAAAATTGTCTCAATCATTCC
TGGCATGTGTTTGCTGTTAGTTTTCGTCAGGAGCTCTGAACTTCCATGGG
GCGGTGTCCAGACCAAGAAAATCCAAAATGTTACAATCACCTTTGAGCAA
TTCAAATTTGTGGGCCAAAATCGATTTATGGGATTTCACACCAAATTTAA
AGGAGTTACGAGATCAGAATGCGCTGAAGCTTGCTCAACTAACACGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036963XLOC_036963Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058674-proteinTCONS_00058674-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058674-exon-scaffold_312-1575043694:194764..195069TCONS_00058674-exon-scaffold_312-1575043694:194764..195069Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1575043694:193946..194073TCONS_00058674-exon-scaffold_312-1575043694:193946..194073Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1575043694:193241..193373TCONS_00058674-exon-scaffold_312-1575043694:193241..193373Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1575043694:190420..190446TCONS_00058674-exon-scaffold_312-1575043694:190420..190446Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1575043694:189485..189604TCONS_00058674-exon-scaffold_312-1575043694:189485..189604Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1575043694:186586..188430TCONS_00058674-exon-scaffold_312-1575043694:186586..188430Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1510915933:194764..195069TCONS_00058674-exon-scaffold_312-1510915933:194764..195069Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1510915933:193946..194073TCONS_00058674-exon-scaffold_312-1510915933:193946..194073Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1510915933:193241..193373TCONS_00058674-exon-scaffold_312-1510915933:193241..193373Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1510915933:190420..190446TCONS_00058674-exon-scaffold_312-1510915933:190420..190446Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1510915933:189485..189604TCONS_00058674-exon-scaffold_312-1510915933:189485..189604Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1510915933:186586..188430TCONS_00058674-exon-scaffold_312-1510915933:186586..188430Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1491911889:194764..195069TCONS_00058674-exon-scaffold_312-1491911889:194764..195069Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1491911889:193946..194073TCONS_00058674-exon-scaffold_312-1491911889:193946..194073Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1491911889:193241..193373TCONS_00058674-exon-scaffold_312-1491911889:193241..193373Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1491911889:190420..190446TCONS_00058674-exon-scaffold_312-1491911889:190420..190446Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1491911889:189485..189604TCONS_00058674-exon-scaffold_312-1491911889:189485..189604Clytia hemisphaericaexon
TCONS_00058674-exon-scaffold_312-1491911889:186586..188430TCONS_00058674-exon-scaffold_312-1491911889:186586..188430Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_312supercontigscaffold_312:186586..195069 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.33259	1.01092	0.489247	0.771531	0.215241	0.261507	0.490359	0.383944	0.590228	0.600454	0.846812	0.300755	0.583744	0.720075	0.295622	0.151889	1.31902	1.5807	0.406826	0.208386	2.30499	1.71443	0.728285	1.37819	3.25743	4.48668	0.288999	0.165046	0.215354	0.0392543
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058674 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top