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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058868 ID=TCONS_00058868|Name=TCONS_00058868|organism=Clytia hemisphaerica|type=transcript|length=709bp
CGAAAGCATCAAAAAAATATCTGGGTACTGGGAGAATCAACTTACACAGT
CAAACTAAAAAATTTTAATCCCAATCTGGTAAATACTATATTATTCTTTA
AAACGAGTAACATTCGGAGCAcaatatataaaataaaattttaaatgaaa
ggGCCTAGGTCATTTTCATGACTTTTTGTTTCACCCCTGgctgaaaaatg
attaaaaaatgaactaaaaacttttttgtccTTTTCATCTATAGAAATAT
CAATTTAATTTCAGtactatttttgataaatttaaatttatgatATATAT
TTATATTTGAGATAATGACTACTCTTTTCTCATTgctttctttgttcttt
tcttttgttcccttttattttctttccttttctctTGCTCTCTCTTTCTT
TGATTCTCCGACGTTTCGCTTCTTCGTCATTTTGTTGTTCTCCTCCTTGC
TGGTCGGTCGATTTCTCTTCAGTTGACTGTTCTCCTCCGGTTGCTGTGTC
TCCTCCGTCTTGTTGGTCTCCTCCGGTTGTTTGGTCTCCTCCGGGTGTTT
GGTCTCCTCCGGGTGTTTGGTCTCCTCCGGTTGTTTGGTCTCCTCCGGTT
GGTTGATCTTCTCCGGTTGCTTGTTCTCCTCCGGTTGTTTGGTCACCTCC
GTTTACTTGGTCTCCTCCGGTTGTTTGGTCTCCTCCGGTTGGTTGATCTT
CTCCGGTTG Run BLAST on NCBI transcript from alignment at scaffold_314:145972..146716- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058868 ID=TCONS_00058868|Name=TCONS_00058868|organism=Clytia hemisphaerica|type=transcript|length=745bp|location=Sequence derived from alignment at scaffold_314:145972..146716- (Clytia hemisphaerica)
CGAAAGCATCAAAAAAATATCTGGGTACTGGGAGAATCAACTTACACAGT
CAAACTAAAAAATTTTAATCCCAATCTGGTAAATACTATATTATTCTTTA
AAACGAGTAACATTCGGAGCACAATATATAAAATAAAATTTTAAATGAAA
GGGCCTAGGTCATTTTCATGACTTTTTGTTTCACCCCTGGCTGAAAAATG
ATTAAAAAATGAACTAAAAACTTTTTTGTCCTTTTCATCTATAGAAATAT
CAATTTAATTTCAGTACTATTTTTGATAAATTTAAATTTATGATATATAT
TTATATTTGAGATAATGACTACTCTTTTCTCATTGCTTTCTTTGTTCTTT
TCTTTTGTTCCCTTTTATTTTCTTTCCTTTTCTCTTGCTCTCTCTTTCTT
TGATTCTCCGACGTTTCGCTTCTTCGTCATTTTGTTGTTCTCCTCCTTGC
TGGTCGGTCGATTTCTCTTCAGTTGACTGTTCTCCTCCGGTTGCTGTGTC
TCCTCCGTCTTGTTGGTCTCCTCCGGGTGTTTGGCCTCCTCCGGTTGCTT
GGTCTTCTCCAGTTGTTTGGTCTCCTCCGGGTGTTTGGTCTCCTCCGGGT
GTTTGGTCTCCTCCGGTTGTTTGGTCTCCTCCGGTTGGTTGATCTTCTCC
GGTTGCTTGTTCTCCTCCGGTTGTTTGGTCACCTCCGTTTACTTGGTCTC
CTCCGGTTGTTTGGTCTCCTCCGGTTGGTTGATCTTCTCCGGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058868-exon-scaffold_314-1575043694:146191..146716 | TCONS_00058868-exon-scaffold_314-1575043694:146191..146716 | Clytia hemisphaerica | exon |
| TCONS_00058868-exon-scaffold_314-1575043694:145972..146154 | TCONS_00058868-exon-scaffold_314-1575043694:145972..146154 | Clytia hemisphaerica | exon |
| TCONS_00058868-exon-scaffold_314-1510915933:146191..146716 | TCONS_00058868-exon-scaffold_314-1510915933:146191..146716 | Clytia hemisphaerica | exon |
| TCONS_00058868-exon-scaffold_314-1510915933:145972..146154 | TCONS_00058868-exon-scaffold_314-1510915933:145972..146154 | Clytia hemisphaerica | exon |
| TCONS_00058868-exon-scaffold_314-1491911889:146191..146716 | TCONS_00058868-exon-scaffold_314-1491911889:146191..146716 | Clytia hemisphaerica | exon |
| TCONS_00058868-exon-scaffold_314-1491911889:145972..146154 | TCONS_00058868-exon-scaffold_314-1491911889:145972..146154 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_314 | supercontig | scaffold_314:145972..146716 - |
Blast
The following BLAST results are available for this feature:
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