TCONS_00058874 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058874
Unique NameTCONS_00058874
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058874 ID=TCONS_00058874|Name=TCONS_00058874|organism=Clytia hemisphaerica|type=transcript|length=164bp
CTTTTCTCCAAGATTTTGTAAGTTCACTAAAACTGCTTGTGCTCtTCTAG
CCCATCCGATAGTTTCTGTGGTGACATTTCTTCCATCTGTTGTTATTGGT
CCAGTGGTATCCAAAAAGCTTTGCAGTGTTTCTCCTATCACTGTTGGCAC
ACAACGGTATGCAA
Run BLAST on NCBI

transcript from alignment at scaffold_314:188191..188539-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058874 ID=TCONS_00058874|Name=TCONS_00058874|organism=Clytia hemisphaerica|type=transcript|length=349bp|location=Sequence derived from alignment at scaffold_314:188191..188539- (Clytia hemisphaerica)
CTTTTCTCCAAGATTTTGTAAGTTCACTAAAACTGCTTGTGCTCTATAAA
AAAATCTGATTTTTAAATATTTCGAAAATCAATATATGACATAGATTTTT
AACGTAATTTCTAAAGACTTCAAATTAAAGGTCACAAGTGAAATTCCAAT
TACTCTTTATGCAATTTTCCGTTTTTTTTAATGATAAAGGAAAATAAAAT
AAAGGAAAGAGATGAGGGAAATACTGACACTCTAGCCCATCCGATAGTTT
CTGTGGTGACATTTCTTCCATCTGTTGTTATTGGTCCAGTGGTATCCAAA
AAGCTTTGCAGTGTTTCTCCTATCACTGTTGGCACACAACGGTATGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037086XLOC_037086Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058874-exon-scaffold_314-1575043694:188495..188539TCONS_00058874-exon-scaffold_314-1575043694:188495..188539Clytia hemisphaericaexon
TCONS_00058874-exon-scaffold_314-1575043694:188191..188309TCONS_00058874-exon-scaffold_314-1575043694:188191..188309Clytia hemisphaericaexon
TCONS_00058874-exon-scaffold_314-1510915933:188495..188539TCONS_00058874-exon-scaffold_314-1510915933:188495..188539Clytia hemisphaericaexon
TCONS_00058874-exon-scaffold_314-1510915933:188191..188309TCONS_00058874-exon-scaffold_314-1510915933:188191..188309Clytia hemisphaericaexon
TCONS_00058874-exon-scaffold_314-1491911889:188495..188539TCONS_00058874-exon-scaffold_314-1491911889:188495..188539Clytia hemisphaericaexon
TCONS_00058874-exon-scaffold_314-1491911889:188191..188309TCONS_00058874-exon-scaffold_314-1491911889:188191..188309Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:188191..188539 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058874 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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