TCONS_00058855 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058855
Unique NameTCONS_00058855
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6507

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058855 ID=TCONS_00058855|Name=TCONS_00058855|organism=Clytia hemisphaerica|type=transcript|length=6507bp
GAACTGTTTTGTTGTTTTCCGGGTGAAATATCAAATCCTTGGCTTTTAGA
AAACACAGTGATCCATCACGTTGGTCGGAACCTGAAATGATGAAAGCTGT
GGAAGGTTTGAAGAAACATGGTCGCTCATGGTCCAAcatttccaaaatgg
tggaaacGAAAACAGAAAACCAATgcaaaaatttctatttcaattataaa
aagaaattcaacttGGAAAAAATTCTCGGTATAGCCAAGCAACAGAAAGA
GGAGCAGGCAACATGGTccaaaaataatgaagaaaaaatggACACAAGTG
AGGAAAGCGTTAAAAAACCTcaagaaagtgaaaaatcttCCGCGAAACAG
GATAAGGAGAAAGGGAAACCATCACAAGAAACTTCAACAACCACCACAAC
CAACCCAGCCACCACCACCGGTGGCCGCACTGGACGCACCCGAAGCGGCA
AAACGAAATCCACCAAAACAACCGATCCTTCGAAACTTTCCACTTCAACC
GTCACATCATCTACCATAGCAACGGTTTTTATGGGAACGCCTGTTACTAC
GTGGAGCAACATTGTGTCAACGACGTTAGTTACTGTGGAAACGCTTTCGG
AAACGCACACATCCGCTTCAAATGAAGATGGAAAAGATTCGGGAGATAAA
GGTGAAGCTAAAGGCAGTCAACCAAAATCTGATCAAAGCATGGACACATC
TCCCACAAAAGCTTCACCTTTCAAAGCTCCGCCCCCGTTACTCTTATCCC
AAACGGAAAAAAGTAAACCGGAAAATGAGAATGAATTCTCCCCGGTTCCT
GTCAAAATCTCTTTGGTTGACGCGTTCACAAAGTATGAAAAAAACATtga
atcgttggataaaaaCATGCAATCACCGGCCACTGAAGGCTCCATGCCTA
ACTTCCCGACTGTCGTTGCTGCATCGATCAGTAGCGCCACTTCACCCCAA
CAAGTACGCCTACCGCCATCATTACGTCATGACGGAGGGCGTTTATCACG
ACATGCTGATTACAGTGAAGAAGACATTCGTGCTTTTACTCACTCACGAA
TGCACATGTCGGCGCACAGTTCGTTATCGCCACGACTTCGGTACACGTCA
GCCGGTCAACGTATGTCATCCCAACAACTGCCTTCAAGTTCTCATCAACC
CATGGTTTCTCCTGTTTTTCCGACCCCGGGTCAAAACATTCGACATCCAA
CAGACCACGGGTTACCGTCATCTTCAGAGGCTTATCGCCAACCGGTTATC
ATATCTTCTCAATCTTTCCCGACGTCGTCCGTCCCAACTGAAGAACAACA
ACGTGCTATTCGTCATTATCAGCAACTAGAAATGCAACGTCGTGCCGCTC
AACATCAACAACCGTATCCGGACCATGAAACTCTTGCGCAAGATTCAATG
AATGAATTCGCTAAAAGAATACACGAACATGGATCGATGTCTCCAGACGC
TATCAATAAGTTGGTCAGCAAATTTATGCGAACCAATCCAAAACAGCCAC
AAAGCCAATCGGAATTGAAACAACGAGCAGCTTCAATCCCCGATCTACGA
CCCATGGCGACTGATCGCAGTCCTTACATGAGTAACAAATTGCATCCTTT
AGATGCTGATCCACGTTTACGAGAACATCAGCGCTTCGGTGCCTTTGAAG
AAGAAATTCTGAAAACCAAAGTCCCCTTGAATCCAATATCAAGACCTGGT
AGTGCAGAACTCGATCATTTCCGTAATCAAAAGAGACTGAGTGATCCTTT
ACGGAACAGTAGAAGTCCGGACATTGAGATGTCTCACAAAAGACGATCAG
CGATTGTCCGTCCCTgggaaattgaagaagaagcTAAGAGAATAAGGGAG
GCGAGTAGCCCCTTCCATCACACTCACTCGACAGCTCCTACCTCCTCACA
CTCTCCAAGGCCACCTCTGCAACAACCAACTACTCCTTCCTACATACAGC
TATCAGCATCAAACAAATATAAGGATAAGATTATACATTATGCCAAACAG
AACAGTCCTGCGCCAGAAACCATCCCTAAATTCAGATACGACGATCCTGC
AATCcatgataaaacaaaagaataccAACGTCAGCGACTAGCCAGTGATC
AGTCGCTGTCGCCTACCTTCCCGATGTCGTTGGGCGTTAAACAACCTCCA
CCCTCTTCCGCAACCTCCCTTGGACGCACAAGAAGTGATTCAGAAGAGAC
CGTTTCAGCAGATGAGGAGGAAATCAACAAACCACCCCCTGTTAGCCTTC
TTCCGCCCTCGTCTACCATCACCACTTCACATCAACAAAGTTTACTCATG
CAGCGTTTGAAGTCGGGCACGCAAACAGAAGCGGATCTAGATttcctgaa
acaaaaaaagtacGGTGGAGGAGGGGCTAAAAGTCATTCACCAAGACCAC
CTTCCATTCCTCCTTCATCGTCCTCAACATTTTCCTCGCActcccaacaa
caacaacatttaCTTCTACAACAACAAAAGCAACATTCCCTTATGGAAAT
ACCACCTAGAGAACGATCACCGCATATCGCTGGCGCCCGCCCGCACGATG
AACGCCACATACGAACTGCGGAGGAATTGCGCCATCATGAATTTCTACGT
CAGAAACAACTTGAAGAAGACGCCAAACAAATGTTGTTTCAAAAGCAGCG
AGCAGAAGAGGACGAGAGATTGAAACAAGCGCACGCGCATGCGTTGTACG
AAGAAGAGATGCGAATAAGACAACACGAAGAGGAGTTACGGCTATTGCAT
TTACAGCGACAACATCAATTACCGCCGCCATATCATGCGGTCCGCCAACA
ACCACACCCTACTGAAGACGAAGACTTGAACAAGAGACGTCAGCAGCATT
TCTTAcaaatgaagaagaaagaacAACAAAAGTTGCAAAGGATTCAATTG
GAAGAGGAGCGCTTGAATCAAAGGNGAGACGTCAGCAGCATTTCTTAcaa
atgaagaagaaagaacAACAAAAGTTGCAAAGGATTCAATTGGAAGAGGA
GCGCTTGAATCAAAGGTATGCGCAACACGGAGGAGATGCGTATCGAATGA
GGATGATTCAGGAGGAGGAGAGAAGAATGAGAGAAGAAGAACGTATTAAA
CAAATACAAATGCGTCAACAGCTAAAACGATACGAAGACGAAGATTTAAA
TCGTCGTCACGTGCNTGCGTCAACAGCTAAAACGATACGAAGACGAAGAT
TTAAATCGTCGTCACGTGCTTCAGTTGCGGGCCGCTCGCGAAGAAGAACT
TCGAGccaaacaacaacagcaacaacactTACAACAAGGACGACTGATGT
TGGATGACATTCAACGGCTTGACGATGAGAAGAGACAACAACAGATGCGT
TTGAAACAGTTAGAAGAACAACAGATGCAAATGAGACAAGCCCTCTCTAC
TACTACAGAGCAACCACGAACAACGAATCCAGCGGAAAGTTTTCTCAaag
ctcaaaataaaaaagagaaaggTACATCTTCACCACGACCACAGCTGCAA
CAACCACAGCCACCGACGATCGATGTGAACCTACAACCAACAAAAAGTCA
ACTCGGTAAACAATTGAATTCACCGTTGCAGCCGCCTCCTCAAGAGTTCC
TCCAACAGCAAGTTGAAGAGGTCGTTCGTTTGCAACAAAGAGCTTTCTCA
CCTCTCATCATGCAGTCCGAACAACACGATAAACTACGTAAAGTCATCTC
ACCTAACCCAACAAAGACAGATGTTGAAACTTCAACACATCCTAACAAAA
CGGTACAAACAATCTTAGCCACTATTCCACAACAGAGTCGTGAAGAGAGA
GAAAGTGTGGAGACAAAGAAAGCCAAACAAACTGAAACGACGCATCTCTC
TAGCAAAGAGAAAGTTCCTAAACTCACCGCCGATTTGAATATACAACGTT
TTGCTCAACAGTCAATGTCACACCATTCAGCACATCTTCAACCACAAAAA
CAACATATCCAATCTCTTCAACAAATTCAACGTGAACAACAAATTGCTGA
ACCAACTCAAGAAACTATTTCAACagtcaaacaaaaacatccACTTCTTC
AACCGCTTGTGCAATCAACACAACAGCCAAACTCAGAACGAATAGAAAAT
CCAACAACGAGAGATGATATGAGACAAAGCTTACAACAACAGCCACAACA
AACGATTGAGGAAGACCAACAAGATACGTCAACACAACGACCTGATTATC
AAGCAGAAACTAACAATAAGCCAACACAGAAAGAGCAACCTTTAGACAAA
CAACAGCAACAAAAAGATAACTCTCGCCCACAAACGCCTCTTGTTCAACA
AAAGGAGTCTTTGCAACAAGACTCCGTAAACAACGTGCCAGCTAGTTTTC
AGCTTGAGAAAGAACAGCAACCAGAAGACCATCATTTCGCTCAAAAACAA
GAGCCTGTCGATCAACACGAAGTCGCGCAACTCCAACAGGTGGGATACGA
TCTACAAGTCGAGCGGAAACCGGAGCCTTCGACAGGGAATGAAACAACAA
GTGTATCTCAACAAGAAAATTCTCATACCACGCAAACAGTTACGATACCT
GATGAAACGGTTGAGAAAGCACGCGATCCTAAAGTTGAACCGAAAGATCA
TAAACAAACAGAAGTAGAAATGGACAGCTTGTCAGAAATTCAAGAGAAAC
CAGACAAGAGGGACTCAACCGAATCATTGGATCCTACACCTCAACCACCA
TCGGAGAACGTTGTCGGCCATCCAAGTAATGTTGAACTCCAGAGCGTTTC
AGAAGACATCAAAGAACCAGAACCATCTATCAACCAAGTAGaagaaattt
ctcaaaaaaagctTGAAGACCCTACTCCGCCAGAAAAGATTCAAGAACCA
TTATCACAACCTGAGCGTTCGGAATCGCCGGATATTTACGATATGAACCT
CAACgatgatgaagatgaaattttggagaaagaagaagaacaagGCTTCG
ACCTTTACAGCGATATGACGTCAAAAACTANGAAGATGAAATTTtggaga
aagaagaagaacaagGCTTCGACCTTTACAGCGACATGACGTCAAAAACT
ATCAATCTTCAAGAAATACCCAAAACTGACGTTGAATTGTTTTACACCAC
ACCGGAAAAAGAAGAAGCGGAAACAGCCATTGGGGAAAGCGGAACGGAAA
CGAAACTTGGAATAGAGTTAGATGACGAATCGAAAAAAGTTGATAACGAT
ACTCAAGTTGATCAAGAAACGGTGACTATTTTACAACAAGAAACTTCAAA
AGACGAAATCGAACCTTCAAAAGATAGTGAAGTaagagaagaagaagatg
aaaacaAACCAATCAATCGTCCTGGTACTCCTTTATTAGACGAACCAATC
ACAGCAGAACTTTCAACGAGTAAGAAAGTAAAGCCAACAAGTTTACAGTT
AAACATAGGTGCCTCGTCAACAGAACCTTCATCACCCGGCTCCACACCAG
AAGCTCACACTCCTCTCATGGACGAACCAAATGAATTCAATTTCGAGCCC
GTTGATTCTATGAGTGGTGACTATTTACGTTTTCAAAGTCAAGCACCGTT
TACTGTACCGACGTCTGCCGCCTCTCGATATTTAGTAGCGCCCTCTTTTG
GAGGCAGTGTTCAACCACCGTTACAACAACAGCAACGTCCAGCTGAAGCT
TTCGAATCGATCACACCTCCAGATTCACCGACGGAATCACACCCGCCAAA
CACATTGGCGCCCAACTATTTTGTCAGTGCACCACCTGTTACCCAGCAAC
AAGCAACTAGCGCCGTTGCCGCTTTCCCATTTTCAGCTTTAGCTATAAGC
GTGGCTGGATCACGCCCTAATTCGAGGTCCGGCAGTATCTGTCAATCACC
GAGCACGACAGTTAGTGATCATTCACCAAGAAGTGATTTTGAACATAGTT
CAAGCAGTAAACAATCGAAATCGAGTAAACGCAAGAGAGACGATAGTTTT
GATAGTAAGgacaattttgatttcagaAGAAGTCAAAAGCGAAATTATAG
ACGATCTGGTTCACAAAGCTCTTCCAGTTCAATTTCGAAATCTCCTGATG
GCGGAGCTGGAGATtatggaaaaatgaaaagactGTGAATGAAATCTTCT
ATAGACTGTTGTTCATGTTAGATAGTTgatagttttctttttttatcccC
AGAGATTATTCAAATTTAGAAGAACAATAAATTGTTCcggttttgaaatt
aaaattaaagcGTAAAATTCAAGCTTTGATCgtcttttctgatatttttt
gatAACCGTCGTCTCGTCAATTATCGTCAGACTccattttacttttacaa
aCGGCTTGTCTTGTTGATATAATCTTTCTGGTTTTGGAACGAAACTGGGT
AATAATATTTGGAATGGGAAAGAAACAGCTTCTAACCTTAAATTTCTTGT
TATTAGGTATTATTTTGACaatttattcttttcttttatacATATATTTA
CGTATTTTTTAATCACTTTTATTGTAAGTTTTCTCCTTACACGATAATCA
AAATCCA
Run BLAST on NCBI

transcript from alignment at scaffold_314:761952..772595+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058855 ID=TCONS_00058855|Name=TCONS_00058855|organism=Clytia hemisphaerica|type=transcript|length=10644bp|location=Sequence derived from alignment at scaffold_314:761952..772595+ (Clytia hemisphaerica)
GAACTGTTTTGTTGTTTTCCGGGTGAAATATCAAATCCTTGGCTTTTAGA
AGTAAGAAGATTTTATgctacaatttttcttttaataattcCTATCCTCT
CTGTAACGTCAAGATTTTTATACTTTCGTTTATAATTTGACTTCATTGAG
TACTGTTGTAGGTTCTTTCTAAACTTTTAGTTTTTATGTATTCTACAGAA
CACAGTGATCCATCACGTTGGTCGGAACCTGAAATGATGAAAGCTGTGGA
AGGtacgttctgtaaattacacgacTTTTAAACCAATTTGCTTGTTGATA
AATGGATGCTGAATTTTTCAGTTTGACTTCTCTATTACAGTGATTCGGTG
TAAAGCTtatgaaaacttaaaattttttgaatattacATAGTTAGTTGAN
TTGTAAAGcttaaatgaaaacttttttttgaatattACATAGTTAGTCGA
CCGCCGGATGGCAAGTTGGCCCGTTCTGGGGTGACGAGAATGATTATAAT
TTAAGAaatggccctttttacaccggcccttaatTCGCCACTACCCAATT
TTAAGGGAACACTAATTAGGGCCATGAAGAACGGCAAAACCTATGAAATT
CCTTAAATTGGCTTTAAAACAGTCAAAAGTATCTGAAATTTAGATGAGCC
TGGTATTATTTTTGTTAAGCCCTTTTAACACCGGCCCTTAATACTCCACA
GGCCTTAGAGTAACGCCAACAAGGACTGGCGTGAAAAAGGTCGATACGGT
GAAAAGAAAGTAGCCAAAATATGATTTCCTACACCTGCTATAGATGATCT
TTCAAGATTCTGTGATTCGTAATCGTATCGATTTCTTATTTAAGGTTTGA
AGAAACATGGTCGCTCATGGTCCAAcatttccaaaatggtggaaacGAAA
ACAGAAAACCAATgcaaaaatttctatttcaattataaaaagaaattcaa
cttGGAAAAAATTCTCGGTATAGCCAAGGTGAGCAGTTTTTCACTTTTAT
GACTGTTTCAAATCGCTCACTTTCTGTAGTTACCGTCAACAATCCACTCA
ACAATAAATCAATCCGATTAAattaaatctcaaaattatgatgtaATTGA
ACTAAATCAACCAATAAGTGCTCAGTAAAGTGATTTGATTGTCGAGTGGA
TTTTTGGATTGTTAAGGGTACGATTGTATACGGTATTCTATTCTGTAACG
ATGTCCGTATGCGCAGATCCTGCTGTTCACACTGTAAAATAGGCCAACAA
TTTAATACCCGATGAGAAATTTACCCTGAAATCTAAAACCGCAACCTTTA
AAGATAAGAGTTTAGGCATTTAGTTCCTCTATTTTACCCTCACTTACTGA
ATAGATGGATATATAAAATGAATCAATGTTAGATACTTTAAATTGTCTTC
CTATAGCAACAGAAAGAGGAGCAGGCAACATGGTccaaaaataatgaaga
aaaaatggACACAAGTGAGGAAAGCGTTAAAAAACCTcaagaaagtgaaa
aatcttCCGCGAAACAGGTATATAACCCACTGAAAGGCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNgaatttccactacaatatattttacacactagttat
ttgtaagaatcaaatttgaataaagctgaaaattaattcaagaaattgaa
aaatttagaaaatcaagcattacTAAGATTTTatcatgatcttcatcgaa
gataaaaaaagtgaatttttgaaccagatattttttggaaaacattttcg
gtactttaaCAACGCTGATGAAtgaagaatttatttttattttaccgacc
gtatccgcccgtagaacaacaaattaaattggtctcgcctaatgtATCTT
CATAAGCAAATATGTTTTAATGTCGAAGTACATGTCCTAATACACCTATC
AGCCCTTGTACTAAACGCAAATAAAAGGGCTTGCGTCCGAGTTTATCTGT
GATGAATGAGGTTGTTGTATTGTTCACAGGGAGATTTaacgaaaaaatta
ttttcgttaaTTAAAGAACATCATTAAAGGTATCTCTTTCCATTTGCTTA
CACTgcattttaaagaaaagaatgaaCAACTTTTTCCCCTTTCCACGCCG
CGCGACCACAAATTGTGACAAATTCTATTGCTTATTTTGCAGTTTAGCGA
CACGCCTCTCTTTATCATAAAAGAGGATATCTTAAGCAGAAAGTCCAGAA
GCCTAATCGTCACTAGAATTCTTCAGTGTCCTTGAAAAATACTTCTTCAA
ATGCACTTTTTCAGGATAAGGAGAAAGGGAAACCATCACAAGAAACTTCA
ACAACCACCACAACCAACCCAGCCACCACCACCGGTGGCCGCACTGGACG
CACCCGAAGCGGCAAAACGAAATCCACCAAAACAACCGATCCTTCGAAAC
TTTCCACTTCAACCGTCACATCATCTACCATAGCAACGGTTTTTATGGGA
ACGCCTGTTACTACGTGGAGCAACATTGTGTCAACGACGTTAGTTACTGT
GGAAACGCTTTCGGAAACGCACACATCCGCTTCAAATGAAGATGGAAAAG
ATTCGGGAGATAAAGGTGAAGCTAAAGGTATGTTTTAAGTGTTAAACGgg
tttcaaaaagtttgaatttttaaagatatagaaaagttgaaaatctaaaC
TTTTTAAGAATTGGAAAGAATAAAGGCTTATTTAGATTTTAAGCTAGTAT
ACATTATTGTTGCTTCACCCGTTGAAAAAGTTATATCGAAAgttcgaaaa
agatttttgagaaacTTCAAATTGAATTTTCTCTTGTTTGGTAGCGTTTG
TCGCTCGAGTGATTTTTTCCATACATTTTCTAATGGAATCTTTAGCTATA
CTTATCACCTGTAAAACCTTGATCCTAATAAATAAGTTATTGTTAGCAAG
AATtgcaaaacaacatttttatataagaacattttagaagAAAAGCGAGG
CTCACAAACGGGAAAAATTTAGAATCTTCAGACTGCGTCTGGTATTACTA
TTACTGAATTAGTCAGATTAGTCAGATTAGTGAAAATGGTGCATAACGCT
CAAAGTTCCTTTTAAATTTTGCTCTGAAAGGACTTAAGATTTCGTAAAAC
AaatctggtttaaaaaaatatttgttgtgGGTGATGTTtgtggaaaaaat
tttcttctgttGTCCTGCTGCGCAATGTTTTCGTTATTTGTAATCGAAAT
CTTACGTCAGGCTCCTAATATTTATTAATTCTTTTATTGTGGTTACGTGA
AATCAATATAAATGCATAAACTCTCCTTGTAAAGCTAGTTTACAATAACC
AAAAAGGTCTCCTACAAAATTCTTAGTCAATGTTCAAACAATAACTTTCA
AGAAACTTTCTATTTCATCAATAGATTTCATTTTCTATATACACATCATT
GtcagtcactttcacttttaaaaGTTCTCTTATTCATAGCAAATCATTTG
CCTTATACCCATCTGAAAATGAATTGAGCTTTGCATCATTTCGCAAACCA
ATAAATATAAATTGACTGCCTTAAACCTTCAATTCAACAAATTCTCATTC
GGTCTTTAGCGCATAAACAGCTCTATGAGAAAGACTTAAGAAAATGGTAC
AAGAGGTCCATCGTGTTCTGTTTCAGAGGCTTACTTAGATTCGATATTAT
GGCTCTTTTCTTTCTNCTAAGAAAATGGTACAAGAGGCCCGTCGTGTTCT
GTTTCAGAGGCTTACTTAGATTCGATATTATGgctcttttctttcttttt
ttagttATTGAATCTCAGAACGATCTAAATATTTATTCGTTGTTTTCTTT
TATCAGGCAGTCAACCAAAATCTGATCAAAGCATGGACACATCTCCCACA
AAAGCTTCACCTTTCAAAGCTCCGCCCCCGTTACTCTTATCCCAAACGGA
AAAAAGTAAACCGGAAAATGAGAATGAATTCTCCCCGGTTCCTGTCAAAA
TCTCTTTGGTTGACGCGTTCACAAAGTATGAAAAAAACATtgaatcgttg
gataaaaaCATGCAATCACCGGCCACTGAAGGCTCCATGCCTAACTTCCC
GACTGTCGTTGCTGCATCGATCAGTAGCGCCACTTCACCCCAACAAGTAC
GCCTACCGCCATCATTACGTCATGACGGAGGGCGTTTATCACGACATGCT
GATTACAGTGAAGAAGACATTCGTGCTTTTACTCACTCACGAATGCACAT
GTCGGCGCACAGTTCGTTATCGCCACGACTTCGGTACACGTCAGCCGGTC
AACGTATGTCATCCCAACAACTGCCTTCAAGTTCTCATCAACCCATGGTT
TCTCCTGTTTTTCCGACCCCGGGTCAAAACATTCGACATCCAACAGACCA
CGGGTTACCGTCATCTTCAGAGGCTTATCGCCAACCGGTTATCATATCTT
CTCAATCTTTCCCGACGTCGTCCGTCCCAACTGAAGAACAACAACGTGCT
ATTCGTCATTATCAGCAACTAGAAATGCAACGTCGTGCCGCTCAACATCA
ACAACCGTATCCGGACCATGAAACTCTTGCGCAAGATTCAATGAATGAAT
TCGCTAAAAGGTAAATGAATTAGCATAGAGTACATCAAACTCTTAAGTTT
TCGAGCATCCCCCAAAATGCACGAAAGGGTTAAACTTTGTAATTCAGAAA
GCTATTCTTGCACAGGTTTACATTAAATTTAAGTTTATAaggaaattgaa
atttaatgaGTGACTCACAAtaatctttttttatcgtattaGAATACACG
AACATGGATCGNTTCAGAAAGCTATTCTTGCACAGGTTTACATTAAATTT
AAGTTTATAaggaaattgaaatttaatgaGTGACTCACAAtaatcttttt
ttatcgtattaGAATACACGAACATGGATCGATGTCTCCAGACGCTATCA
ATAAGTTGGTCAGCAAATTTATGCGAACCAATCCAANTTTTTTTATCGTA
TTAGAATACACGAACATGGATCGATGTCTCCAGACGCTATCAATAAGTTG
GTCAGCAAATTTATGCGAACCAATCCAAAACAGCCACAAAGCCAATCGGA
ATTGAAACAACGAGCAGCTTCAATCCCCGATCTACGACCCATGGCGACTG
ATCGCAGTCCTTACATGAGTAACAAATTGCATCCTTTAGATGCTGATCCA
CGTTTACGAGAACATCAGCGCTTCGGTGCCTTTGAAGAAGAAATTCTGAA
AACCAAAGTCCCCTTGAATCCAATATCAAGACCTGGTAGTGCAGAACTCG
ATCATTTCCGTAATCAAAAGAGACTGAGTGATCCTTTACGGAACAGTAGA
AGTCCGGACATTGAGATGTCTCACAAAAGACGATCAGCGATTGTCCGTCC
CTgggaaattgaagaagaagcTAAGAGAATAAGGGAGGCGAGTAGCCCCT
TCCATCACACTCACTCGACAGCTCCTACCTCCTCACACTCTCCAAGGCCA
CCTCTGCAACAACCAACTACTCCTTCCTACATACAGCTATCAGCATCAAA
CAAATATAAGGATAAGATTATACATTATGCCAAACAGAACAGTCCTGCGC
CAGAAACCATCCCTAAATTCAGATACGACGATCCTGCAATCcatgataaa
acaaaagaataccAACGTCAGCGACTAGCCAGTGATCAGTCGCTGTCGCC
TACCTTCCCGATGTCGTTGGGCGTTAAACAACCTCCACCCTCTTCCGCAA
CCTCCCTTGGACGCACAAGAAGTGATTCAGAAGAGACCGTTTCAGCAGAT
GAGGAGGAAATCAACAAACCACCCCCTGTTAGCCTTCTTCCGCCCTCGTC
TACCATCACCACTTCACATCAACAAAGTTTACTCATGCAGCGTTTGAAGT
CGGGCACGCAAACAGAAGCGGATCTAGATttcctgaaacaaaaaaagtac
GGTGGAGGAGGGGCTAAAAGTCATTCACCAAGACCACCTTCCATTCCTCC
TTCATCGTCCTCAACATTTTCCTCGCActcccaacaacaacaacatttaC
TTCTACAACAACAAAAGCAACATTCCCTTATGGAAATACCACCTAGAGAA
CGATCACCGCATATCGCTGGCGCCCGCCCGCACGATGAACGCCACATACG
AACTGCGGAGGAATTGCGCCATCATGAATTTCTACGTCAGAAACAACTTG
AAGAAGACGCCAAACAAATGTTGTTTCAAAAGCAGCGAGCAGAAGAGGAC
GAGAGATTGAAACAAGCGCACGCGCATGCGTTGTACGAAGAAGAGATGCG
AATAAGACAACACGAAGAGGAGTTACGGCTATTGCATTTACAGCGACAAC
ATCAATTACCGCCGCCATATCATGCGGTCCGCCAACAACCACACCCTACT
GAAGACGAAGACTTGAACAAGAGACGTCAGCAGCATTTCTTAcaaatgaa
gaagaaagaacAACAAAAGTTGCAAAGGATTCAATTGGAAGAGGAGCGCT
TGAATCAAAGGNGAGACGTCAGCAGCATTTCTTAcaaatgaagaagaaag
aacAACAAAAGTTGCAAAGGATTCAATTGGAAGAGGAGCGCTTGAATCAA
AGGTATGCGCAACACGGAGGAGATGCGTATCGAATGAGGATGATTCAGGA
GGAGGAGAGAAGAATGAGAGAAGAAGAACGTATTAAACAAATACAAATGC
GTCAACAGCTAAAACGATACGAAGACGAAGATTTAAATCGTCGTCACGTG
CNTGCGTCAACAGCTAAAACGATACGAAGACGAAGATTTAAATCGTCGTC
ACGTGCTTCAGTTGCGGGCCGCTCGCGAAGAAGAACTTCGAGccaaacaa
caacagcaacaacactTACAACAAGGACGACTGATGTTGGATGACATTCA
ACGGCTTGACGATGAGAAGAGACAACAACAGATGCGTTTGAAACAGTTAG
AAGAACAACAGATGCAAATGAGACAAGCCCTCTCTACTACTACAGAGCAA
CCACGAACAACGAATCCAGCGGAAAGTTTTCTCAaagctcaaaataaaaa
agagaaaggTACATCTTCACCACGACCACAGCTGCAACAACCACAGCCAC
CGACGATCGATGTGAACCTACAACCAACAAAAAGTCAACTCGGTAAACAA
TTGAATTCACCGTTGCAGCCGCCTCCTCAAGAGTTCCTCCAACAGCAAGT
TGAAGAGGTCGTTCGTTTGCAACAAAGAGCTTTCTCACCTCTCATCATGC
AGTCCGAACAACACGATAAACTACGTAAAGTCATCTCACCTAACCCAACA
AAGACAGATGTTGAAACTTCAACACATCCTAACAAAACGGTACAAACAAT
CTTAGCCACTATTCCACAACAGAGTCGTGAAGAGAGAGAAAGTGTGGAGA
CAAAGAAAGCCAAACAAACTGAAACGACGCATCTCTCTAGCAAAGAGAAA
GTTCCTAAACTCACCGCCGATTTGAATATACAACGTTTTGCTCAACAGTC
AATGTCACACCATTCAGCACATCTTCAACCACAAAAACAACATATCCAAT
CTCTTCAACAAATTCAACGTGAACAACAAATTGCTGAACCAACTCAAGAA
ACTATTTCAACagtcaaacaaaaacatccACTTCTTCAACCGCTTGTGCA
ATCAACACAACAGCCAAACTCAGAACGAATAGAAAATCCAACAACGAGAG
ATGATATGAGACAAAGCTTACAACAACAGCCACAACAAACGATTGAGGAA
GACCAACAAGATACGTCAACACAACGACCTGATTATCAAGCAGAAACTAA
CAATAAGCCAACACAGAAAGAGCAACCTTTAGACAAACAACAGCAACAAA
AAGATAACTCTCGCCCACAAACGCCTCTTGTTCAACAAAAGGAGTCTTTG
CAACAAGACTCCGTAAACAACGTGCCAGCTAGTTTTCAGCTTGAGAAAGA
ACAGCAACCAGAAGACCATCATTTCGCTCAAAAACAAGAGCCTGTCGATC
AACACGAAGTCGCGCAACTCCAACAGGTGGGATACGATCTACAAGTCGAG
CGGAAACCGGAGCCTTCGACAGGGAATGAAACAACAAGTGTATCTCAACA
AGAAAATTCTCATACCACGCAAACAGTTACGATACCTGATGAAACGGTTG
AGAAAGCACGCGATCCTAAAGTTGAACCGAAAGATCATAAACAAACAGAA
GTAGAAATGGACAGCTTGTCAGAAATTCAAGAGAAACCAGACAAGAGGGA
CTCAACCGAATCATTGGATCCTACACCTCAACCACCATCGGAGAACGTTG
TCGGCCATCCAAGTAATGTTGAACTCCAGAGCGTTTCAGAAGACATCAAA
GAACCAGAACCATCTATCAACCAAGTAGaagaaatttctcaaaaaaagct
TGAAGACCCTACTCCGCCAGAAAAGATTCAAGAACCATTATCACAACCTG
AGCGTTCGGAATCGCCGGATATTTACGATATGAACCTCAACgatgatgaa
gatgaaattttggagaaagaagaagaacaagGCTTCGACCTTTACAGCGA
TATGACGTCAAAAACTANGAAGATGAAATTTtggagaaagaagaagaaca
agGCTTCGACCTTTACAGCGACATGACGTCAAAAACTATCAATCTTCAAG
AAATACCCAAAACTGACGTTGAATTGTTTTACACCACACCGGAAAAAGAA
GAAGCGGAAACAGCCATTGGGGAAAGCGGAACGGAAACGAAACTTGGAAT
AGAGTTAGATGACGAATCGAAAAAAGTTGATAACGATACTCAAGTTGATC
AAGAAACGGTGACTATTTTACAACAAGAAACTTCAAAAGACGAAATCGAA
CCTTCAAAAGATAGTGAAGTaagagaagaagaagatgaaaacaAACCAAT
CAATCGTCCTGGTACTCCTTTATTAGACGAACCAATCACAGCAGAACTTT
CAACGAGTAAGAAAGTAAAGCCAACAAGTTTACAGTTAAACATAGGTGCC
TCGTCAACAGAACCTTCATCACCCGGCTCCACACCAGAAGCTCACACTCC
TCTCATGGACGAACCAAATGAATTCAATTTCGAGCCCGTTGATTCTATGA
GTGGTGACTATTTACGTTTTCAAAGTCAAGCACCGTTTACTGTACCGACG
TCTGCCGCCTCTCGATATTTAGTAGCGCCCTCTTTTGGAGGCAGTGTTCA
ACCACCGTTACAACAACAGCAACGTCCAGCTGAAGCTTTCGAATCGATCA
CACCTCCAGATTCACCGACGGAATCACACCCGCCAAACACATTGGCGCCC
AACTATTTTGTCAGTGCACCACCTGTTACCCAGCAACAAGCAACTAGCGC
CGTTGCCGCTTTCCCATTTTCAGCTTTAGCTATAAGCGTGGCTGGATCAC
GCCCTAATTCGAGGTCCGGCAGTATCTGTCAATCACCGAGCACGACAGTT
AGTGATCATTCACCAAGAAGTGATTTTGAACATAGTTCAAGCAGTAAACA
ATCGAAATCGAGTAAACGCAAGAGAGACGATAGTTTTGATAGTAAGgaca
attttgatttcagaAGAAGTCAAAAGCGAAATTATAGACGATCTGGTTCA
CAAAGCTCTTCCAGTTCAATTTCGAAATCTCCTGATGGCGGAGCTGGAGA
TtatggaaaaatgaaaagactGTGAATGAAATCTTCTATAGACTGTTGTT
CATGTTAGATAGTTgatagttttctttttttatcccCAGAGATTATTCAA
ATTTAGAAGAACAATAAATTGTTCcggttttgaaattaaaattaaagcGT
AAAATTCAAGCTTTGATCgtcttttctgatattttttgatAACCGTCGTC
TCGTCAATTATCGTCAGACTccattttacttttacaaaCGGCTTGTCTTG
TTGATATAATCTTTCTGGTTTTGGAACGAAACTGGGTAATAATATTTGGA
ATGGGAAAGAAACAGCTTCTAACCTTAAATTTCTTGTTATTAGGTATTAT
TTTGACaatttattcttttcttttatacATATATTTACGTATTTTTTAAT
CACTTTTATTGTAAGTTTTCTCCTTACACGATAATCAAAATCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037076XLOC_037076Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058855-exon-scaffold_314-1491911889:761952..762002TCONS_00058855-exon-scaffold_314-1491911889:761952..762002Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1510915933:761952..762002TCONS_00058855-exon-scaffold_314-1510915933:761952..762002Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1575043694:761952..762002TCONS_00058855-exon-scaffold_314-1575043694:761952..762002Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1491911889:762150..762203TCONS_00058855-exon-scaffold_314-1491911889:762150..762203Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1510915933:762150..762203TCONS_00058855-exon-scaffold_314-1510915933:762150..762203Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1575043694:762150..762203TCONS_00058855-exon-scaffold_314-1575043694:762150..762203Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1491911889:762796..762929TCONS_00058855-exon-scaffold_314-1491911889:762796..762929Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1510915933:762796..762929TCONS_00058855-exon-scaffold_314-1510915933:762796..762929Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1575043694:762796..762929TCONS_00058855-exon-scaffold_314-1575043694:762796..762929Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1491911889:763358..763468TCONS_00058855-exon-scaffold_314-1491911889:763358..763468Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1510915933:763358..763468TCONS_00058855-exon-scaffold_314-1510915933:763358..763468Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1575043694:763358..763468TCONS_00058855-exon-scaffold_314-1575043694:763358..763468Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1491911889:764816..765128TCONS_00058855-exon-scaffold_314-1491911889:764816..765128Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1510915933:764816..765128TCONS_00058855-exon-scaffold_314-1510915933:764816..765128Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1575043694:764816..765128TCONS_00058855-exon-scaffold_314-1575043694:764816..765128Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1491911889:766358..767111TCONS_00058855-exon-scaffold_314-1491911889:766358..767111Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1510915933:766358..767111TCONS_00058855-exon-scaffold_314-1510915933:766358..767111Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1575043694:766358..767111TCONS_00058855-exon-scaffold_314-1575043694:766358..767111Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1491911889:767506..772595TCONS_00058855-exon-scaffold_314-1491911889:767506..772595Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1510915933:767506..772595TCONS_00058855-exon-scaffold_314-1510915933:767506..772595Clytia hemisphaericaexon
TCONS_00058855-exon-scaffold_314-1575043694:767506..772595TCONS_00058855-exon-scaffold_314-1575043694:767506..772595Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:761952..772595 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.67515	4.00181	1.04465	0.985172	4.39795	4.07258	9.33009	12.1511	4.55589	4.56939	4.50634	3.47383	2.50675	2.94204	2.10227	2.54974	1.86967	2.26758	2.42883	3.10022	2.30332	2.29554	3.7	3.53077	4.01055	4.34995	1.71237	1.5963	3.26739	3.75517
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058855 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top