TCONS_00058993 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00058993
Unique Name	TCONS_00058993
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1841

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_315:83199..93530-
coding sequence from alignment at scaffold_315:83199..93530-

transcript sequence

>TCONS_00058993 ID=TCONS_00058993|Name=TCONS_00058993|organism=Clytia hemisphaerica|type=transcript|length=1841bp
CGGTGTTTGCTGCGTCGGTGTTTGTAAAGAAATGGAAGAaggtaaaacaa
acaaaataaaattcgaACGAAGATGTCCTGGTATTGGTGAGTTTTTAGCT
TACACAAGTGTTGTAGTGGTTGCATGTGCCGTTATAGTACCTCTCGAATT
GAAGTATGGTTATTCGTCAAGAGTATTTAATTCATTCCATATGCATAGCA
CTAATGACGATAGTGTATTGCATACCTTGATCAACATTCTGGGGCTTTTC
AAGAAGCCAGCTGCACAACAACCAAGTACTGGAGAAAGGATATTCACTAA
AGACGAAATCAGACAATATTCCGGTGAAGTCGAAGGGAAGCCGATCTATT
TAGCATACTTAGGAAAAGTTTATGACGTCACCACTGGTAAACAACATTAC
GGTAAAGATGGTGCATATCATTTCTTTGCTGGCAAAGATGCTTCTAGAGC
TTACGTCTCTGGTCAGTTCAACGATGAAGGGTTGATTGACGACATTACTG
GACTACCAGCTGGTCAATATTCGGGCTTGAAGGGTTGGACTGATACTTTC
GAAAACAAATACCCTTTTGTTGGTAAATTAGAAGGTTTCTTTTACGATTC
AAAAGGCAATGAAAAAGAAGGAATTGCTATTTATCGGCAAGGTTTAATTG
AAGCATCGAAATTCGAAGCCGAGGAAAAAGATGATGAGAAAAGGTTTCCA
GGATGTAATTCAAGATATACGCCACAAAcgggtcatgaaatttggtgcTC
CACTAACAGTGGGGCTGTCGATCGTGATTGGACAGGATATCCCCGAAAGT
TTTTCAAACCTGGTCGAACGAATTTCCGTTGCGCGTGTGTTCCAAAGGCT
CTACTATCTGACCCTCGTTTCAAAGAATTTGATGGTTGTCCTACAGACTC
TGTAAAATGTAAGTTGGTCCAATAATGTAGGTGGAGTTGTTTGACTTTAT
TGCTGGCGGTTAGTTAATGATATGACTAATGGTAGAATTTGTTTGAGATC
ACACGTGGTGTTTTTTATTGATAtgatacttttgaaaaactgatTCTTCA
TTggtagaaaattcgtcggcaAAAAAGTATTTAGATAGATTTTGTTTTAA
ACTGTATGAGGTTAAAGGCTTGGGAACACGagttttttttgcgttggtgt
aatacaacatgctccatcccaccaacctgaaacgctttctcgtgtctcca
tccccatttttcttttaataacattttgtgcttctctcacttttgtccct
gggacaaaatcagcgtgtcttttgggtatttccctcactttttgtcccat
aaaacaaaaaaggaaacaaTGGGATACGCACTTTTTTTCAGGTTCGTGGG
ATGagtatgttgcattgcaccaacgcgaaaaaacttctcgtgtccccaag
ccttaagttTATTTATAtcgaatttttttaacgatgcaTTCTGAAAAGTC
TTTGTACTTTTTCTTGTTTATGGTGATTTTTATACATTATAgaaataaag
ataaattttCGATGAGGTTCCTTGAATATCTGTTTTGAACCTGCTCTACC
TATAATGAGAAGAAAAAACAGCTCTATCTTGCCAGACTCTTCCCCTTGGA
AGATTGTTATGCGCAGGTAATTTTTACGAGTTACGCAAATTTAATTAAAT
TGTTGTGTAGATTTGTAAATTCCgattttttctatttagtaTAACTTAGG
ACTTAGGCaggactttttgaaaatattgacacgATTTCAGATTTTAGTAT
TAATTTCTTAAGTGTGATTAATTACGTGCTTCTCGTACCTTTGTGCCTTT
TTGGGTCCCGAAAAAAATCTCTTGGGATCCCGAAAAAAAAT

Run BLAST on NCBI

protein sequence of TCONS_00058993-protein

>TCONS_00058993-protein ID=TCONS_00058993-protein|Name=TCONS_00058993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
GVCCVGVCKEMEEGKTNKIKFERRCPGIGEFLAYTSVVVVACAVIVPLEL
KYGYSSRVFNSFHMHSTNDDSVLHTLINILGLFKKPAAQQPSTGERIFTK
DEIRQYSGEVEGKPIYLAYLGKVYDVTTGKQHYGKDGAYHFFAGKDASRA
YVSGQFNDEGLIDDITGLPAGQYSGLKGWTDTFENKYPFVGKLEGFFYDS
KGNEKEGIAIYRQGLIEASKFEAEEKDDEKRFPGCNSRYTPQTGHEIWCS
TNSGAVDRDWTGYPRKFFKPGRTNFRCACVPKALLSDPRFKEFDGCPTDS
VKCKLVQ

Run BLAST on NCBI

transcript from alignment at scaffold_315:83199..93530-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00058993 ID=TCONS_00058993|Name=TCONS_00058993|organism=Clytia hemisphaerica|type=transcript|length=10332bp|location=Sequence derived from alignment at scaffold_315:83199..93530- (Clytia hemisphaerica)
CGGTGTTTGCTGCGTCGGTGTTTGTAAAGGTAAGTCATATTTCATCAGGA
ATATACTTATCCAGCATCAGTCAGTCAGCTATCGACAATCAAGTGATAGT
TATTACTCAAGTGTGAAGCAGCATTTCTATTTTGTTTCTTGTTAATATTC
CGATGCACAAACAAAGGATTGAAACAAAACCCTCCCTCCCTCCTGCCCTG
CCCTTAGGCCGATGAAATTTATATATGAGTTTACCGTCAGCCGCCCGCAT
CTCTAAAAAGCACCCGCATGAAAATTTCATTATTTTCAAAATTCATAAAT
TTTTCATTATTTCCATATTTCTTTACAACTACAACCTCTATCATTGTTAA
AATCGTCTCTACGCATGTTTACACGGGATTTATTACAGATTTATTACAGA
AAATGCTGCCGCCCTCAATCCTACAACTGCAGTGGGCGTCCCGCCCATAT
ATCTGCCAAACCGCCCTGACCGCCATTTTAGTTTTTTGCAAAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTCGCAAAAGAT
GCGAAGGGTTGAAGCGAAGCAAATTTTTTTATTTTGAGAGAGCATGATTG
GCAGAAATGGTGGATAAGGTGCTGTTGGGAAAATACCGTGAGATTGGGTA
ACTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGAAAGACCTAG
CTGGTCATTAAAATACAAAGTTAAGTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTA
TTTTAATGACCAGCCAGGTATTTCATTTGAGAGCTATGCATGTTAGCCTC
CACTGATGCAAGTTACCCTTAATCTCACGGTAATGAATAATGAATAATGA
AATCATGCCGCATCTATTTTTGGGTAAGTTCACGACGGTAAACTCATATG
TAAATTTCATCGGCCTTAACTGTTACAGAAAATCATCCATGACCATGGCC
ATCCACAGGAAGAGAGGCAGACAGGGGGTAGTCATGGACTATAACTGGAA
CCACCTATTGGCTTTTTTAGAATTGCACCCTTGCAGTGCAGTCAGCAGAA
ATAGGTGAAATTCAGATCAGGTCCTTATATTTACAGAATTTTACATCTGT
ACATATATGTTTTTTTATAATATAAAAGCATACAAAAATCCAAAAGCGCT
GGCTGGGAAATGCTTAGATTGAGAGATTTACAAAGCTGAAAAATCCTTTG
AGGGATATCCTAAGCAAAATTTTAGAGAAATTTCGAAAATCCAGCCAAAA
ACAAACAAATTCTGAAAATAAAAGCTCAAAGTAATGTTATTTAGCATTTG
TTAACCGGTTGCTTTTTCAAAGCGGCCTACACTGCCCAGAGTTGCCCAGA
GTTAGGAAAATTCATTGTGACGTCACTTTTTCAAAGGAAAATGAACAATG
CGTTGGGTGGCAATCTTCGTTTCGCGTCGCCCGACCGACTCTCGAAAATT
GAGTAGAATTGGGTCGGTGAGTCGGTAAATTTGTCAGACTTTTTCTGTCG
ATGATGTTTCCTTCCTTCAAAAATTTTATTATTGCCGATTTTTTGCGAGC
GATTTCTAGCGCATTCGCAGCATTTTGACTTTGTTTATCATTACATGCGC
CATTTTAGGTTGTAGGTCATAGTGTTCAAAGGTCATAATTTGAAACCACC
TATAACACGCGTTTGTTTTGGCTGCCGGCTGGCTGGCAGTTTCCTTCAAG
AATATATACACTCCAAAAGTGGAGGATGTTTGGATCAAATTTTTACAACT
GACCGACTCACTTTTTAGACCCAACGAGGACTCGAAATGAAGATATTTGT
GATTGGCGCCTATGCTTAAATTTTTACCATATGAGCCTACAGTAGGCCCT
AGATATACTTATAGTGCAATGCTTACTGTGTGAAAAAAAAACATGTACAG
TAGTGCATTTTCTCAAATTTTCGACTCTTAGAGCTGATAACTCATAACTT
TCAAGCAGCAAGAATTTGCAGTTTTCCTGGATTTGCTGAAATTTCAATCC
ACCCTCAGGGATTTTTCTAAGCACTTTCTTACTACCGTATACCGGCAAAA
ATACTCAATCCAAGATTGAGTTATGAAACTCAATCCGAAATATAAAAAAA
AATTAAAAAAAGAAAAGTTTCAAAGCAGTTTTCTCAGAAACGCCAATTGT
TTGTTTTTAATCAGTATAGAGTAAAGACAACACTACTGGGTCAGAAACCG
TTCGATTCGGACACACGAACGCTTTTCCATTCGTGACGAACGGGTTAACC
GTTCGCAACGAATGGAATGCTTTTGCATCCTTTGCGAACGCCCTACAAAA
AAGTTTTATTGAAACTGTTCGCGACGAACGCTTATGCTTTTTAACCCGTT
TGTGACGAACGGCCTACTGTAAAAAGAAAACCGTTTGTGAAGAACGCTTA
CGAAAACTTGAGATATGAAACCGTACGCGAAGAATGCTTTTCCGAATGCT
TTTAAAGAATCATTCAAAAAAACGTTCGTCACAAATGGTTTAACATACGC
AACAAATGGATTTTAATGGAAAAAGTTTTAACTAAGAAAATTTATTTCGC
ATTTACTTGGATTTTTGGAACAGGGAATGAATTTACTTATTGAGTTAAAA
ATGGAGTTTGGTATACCCCTGTCCCACTAATTGAAATTCTTTATTATTAT
TTTCGACAATGTAGGACTGCAATCGGACATTATGTCCGACTAGAAACACT
CTTAAAAGTTACGAAGAAGCGATTTCATAAAAGTGATCTTAGATACACTC
TTAAAAGTTACGAAGAAAACGATTCGATAAAATCGATCTTAGAAAACACT
CATAAAAGTTACAAAAAATTACGAAAAAGCGATTTGATTAAAGCGATCCT
AGAAACACTCTTAAAAGTTACGAAGAAGCGATTTGATAAAAGTGATCTTA
GAAACACTCTTAAAAGTTACGAAAAAGCGATTTGATTAAAGCGATCCTAG
AAACACTCTTAAAAGTTACGAAGAAGCGATTTGATAAAAGTGATCTTAGA
AACACTCTTAAAAGTTACGAAAAAGCGATTTGATAACAGCGATATTTGAA
ACACTCATAAAAGTTTCGAAAAAAGCGATTTGATATAAAAGTGATCTTAG
AAACACTCTTAAAAGTTTCGAAAAAAGCGATTCGATAAAAGTGATCTTTG
AAACACTCTTAAAAGTTACGAAGAAAGCGATTTGGTAAAAGTGATCCTAG
AAACACTCTTAAAAGTTTCGAAAATAGCGATTTGATAAACGTGATCTTAG
AAACACTCTTAAAAGTTACGAAGAAAGCGATTTGATAAACGTGATCTTAG
AAACACTCTTAAAAGTTATGAAAAAAGCGATTTGATAAATGTGATCTTAG
AAACACTCTTAAAAGTTTCGAAGAACGCGATTTGATAAAAGTGATCTTTG
AAACAGGCATAATTCGATAAAGAATAGAGTAAGAGTCAGGGGTGTATGTG
AGATTTGATCTTGATGAAATGAATTTTAAGAGAATCCTCATAAATTCCTT
TGTAAATTTTTTCATGGTCAGAACTTTGAGCACAACTCTGAACCTGCAAA
GCATCTCAAAAGCCACCCTGACCACGAATTCTTATGGAAAATAATCTTAA
ACGCTCCCACGAATACCCGATTAAGAAAAAATCTGGAAGCGGCATTAATT
GCCCTTAAGAGACCACGTCTTCATGACCAACTCGACTCTGCTCGTTTAAT
TCTTTTTAGAAATGGTGTAACATAGATTTTAATAGAAAAGATACATTCAC
ATAACCAGTGACAATGCCTCTTTTCATTTTTAATAGCTTTCTTTTATTAC
TTTTTAATGATTTTAGACGAATAAATTTGTAACTTTTTTGATTTTCAATT
TTACTATTCTATAGCACTGATGATGGAAGGACCGAAAAGCTTTTGCTAAT
TTTAAATGTTGTTGTTTTTTATATTTTTATCAATATGGCAAACATTGATC
ATATATCTTTCAAGGGTGTTTCAAAGTTAACTTTTATCGACTTGCTTTCT
TCGTAACTTTCAAGAGTGTTTCTAAGATCACTTTTATCAATTCGCTTTCT
TCGTAACTTTCAGGGTGTTTCTAAGCTAACTTTTGTCAACTTGCTTTCTT
TGTAACCTTCTTTGTTTCTAATATCACTTTTATCAATTTGGTTTCTTTGT
AACTTTCAAGGGTGTTTCAAAGTTAACTTTTATCGACTCGCTTTCTTCGT
AACTTTCAAGAGTGTTTCTAAGATCACATTTATCAATTCGCTTTCTTCGT
AACTTTCAAGGGTGTTTCAAAGTTAAACTTTTATCGACTCATTTTCTTCG
TAACTTTCAAGAGTTTTTTTAAGACCATTTTCATCAACTTGCTTACTTCA
TAACTTTCAATAGTGTTTCTAAGTTAACTTTTATCAACTCGCTTTCTTCT
TAACTTTTAAGAGTGTTTCTAAGTTAACTTTTATCAACTTGCTTTATTCG
TAACTTCCAAGGGTGTTTCTAAGATCACTTTTATCGAATCAATTTCTCTG
TTATATACAGTAACAAATTGTTCAAAGGTAACTTTTATTTTTCTCGCTTT
CTCCATAACTTTAAAAAAAAAAATATACACTGAATGACCGACAGGATTTT
GAGTTTGACCGACAGGATTTCATTTCTGTCGGACATGATGTCTGATTGAC
TAAAAATATTTATTTGCTGCCATGTGAAACCTTTGAACATACTCGTTGGT
CAGTTTCCCTGTCTGCAATCAATCAAAACATCGGTTTTCAGGGCTGATTC
TAATTTTTCTACCAGGTAAAAAGCCAGATACTGTAGGTATTTTTCTCATT
TGTCAACTACATAGTTTTTTCGTCTATTTTTCATGGTTCCACACAAAAGA
TTGGTGGTAAGACGAGACAAGCCAATTGATTTTCAAAATTAAAAAAAAAA
GGTTGTTGGTATGTGTAAAAAAAGATAATAGATAATATAGGAGGTAGGAT
TGGAGAGTTAAGGGAGAGTTAAAAAGGAGAGATTGGTCATTTTTCATTAA
TAGTTTTTAATTTTAATTTTAAGTTTTTAATTGTAAATGTGTGATGTGTG
AATAGAAAAAATTAAAAATTACAATATTAGATGACTGACTCTACTAAGGG
TAGGGGGGGGGTCTTGGACTAGCGTCATTTTGACGTGGGAAATATTGATA
TGTAAGTGCCCCTTAAATATATACTTAAAATTTAGCACAGACATTATTCA
TTGAGAGAGCCATTTCAAGTTGAATGGCAACCAGTAAAATGATGTAAAAT
GAGGTCATTTTTTGCCATAATAACCAGAAACTATTTTAAAGGTTTTATTT
TTATTTTCCTCTTTCTGACCAAACTTGCTCCACATCCGTGTCGATTCAAT
GTGAAAAAGCTTGTAAATTTAATTTGGTGAAGGCTCAATTAGAAGATATT
TCTGATTTTGATTATCGACTACTGGGTTTCTATGAGGAAAATCATCAGAA
ATAGGGGGCTTATAATTAATTGTTAAATGAGTGTCCTCAACAAAAACAAA
TTCCCTTACACCGTCCTAATAAACTCTTTAACACAATTCTACAACTAGAA
CCTCCTTAATTCGAATGTCTCCTTCTTTAACTCGAACAATTTTGTAGTCT
CTTGCGAGGTTATGCTTTTTGTGTCCCTAATTCAAATTCTTCATAAAAAG
AGCTTTTCCTTCACCTTGGCATTCGAGAAACTCATCTGTACAAGCAGTTG
ATTATTAAAAAATACTAGAGAAATGCATTTTTTTTTACATTTCTAATGAG
TTATGAGTTGAGTTCGCTGAGTTTTGATTTTTTGGCCTGTTTGATAAAAA
AGAAAGACTTTCCTTGGTTTATGGGAGCACTCTTGATGAGCAATTTATCG
TTTGTACAATAATTTCTACTCAAGATATTATAACGTGATAAGACTCATGC
AAACCCCTTTCATTCATAGTTTTATGTAAAATTTGTCAAATTGTCATGAA
ATTCGTATAGTTACTCTTATTAAAAAACGTTATACTATCTTGTATATTTT
CAATCAATCAGAAATGGAAGAAGGTAAAACAAACAAAATAAAATTCGAAC
GAAGATGTCCTGGTATTGGTGAGTTTTTAGCTTACACAAGTGTTGTAGTG
GTTGCATGTGCCGTTATAGTACCTCTCGAATTGAAGTATGGTTATTCGTC
AAGAGTATTTAATTCATTCCATATGCATAGCACTAATGACGATAGTGTAT
TGCATACCTTGATCAACATTCTGGGGCTTTTCAAGAAGCCAGCTGCACAA
CAACCAAGTACTGGAGAAAGGATATTCACTAAAGACGAAATCAGACAATA
TTCCGGTGAAGTCGAAGGGAAGCCGATCTATTTAGCATACTTAGGTGAGT
TTTTTCATCGTGCCTTCTATTTAAGATTGTATTGTCTTTCCTGCTATCAG
TATCACATTCCAGTTACTTTAGGCGTACAAACTTTCGCGAGCAGAAACTT
TTTCAAGGTCGAAAAATCGCGAAATCTACAACATTTACTTTCGCGAATTT
GAAAAAAAAATTTTCGCAAGCATAAACTTTCGCGAATTAGGAATATTTTA
AGTAGAAAATTCAAGTTTTCGGTGCAGTCTTTTGATCGTTCAAATGTACT
CAATCCACAATTGATGGACCTTTGTGCATAATTTCTACAGTAGATTTTAT
CTTTGTTAACATCAAAGAGGAAAATTTGAGTAAATTTTCTATTCAGATTT
TTTTTCGGGAGCATAAACTTTCGCGAATTGCCCTCTCAAGAATTTTCAAG
GACATTTACTTTCGCGAAAAGGGCTAGAGTTTCTGCTCGTGAAAGTTTGT
ACGCCTAAAGACTAAAGTACCATTCCCACATACCAATGCCCACGATAATC
TAACCTGGATATCCAAGCAGCAAATTTATTTCTTATTTTGATATTTCTGC
TATTTACAGCTTGCCGATAATCATTTAACAATGATAAGGTGCTATTCTTT
TAAAGAAACATATTCAATCTATTGTTTTGGGAATTTTTTATGGGAGGCTA
GTACTGCAGTTAGCCTGGAGATCCATGCTATGATTTGTTATTCTATGTAC
TGATGACGAAATATACTAATACAATAATAACTGGTTTTGAGGTCAATATT
TTACGTATTGACCGAGAAAACAGTTATATTATTGTGCTTATTAACTGGTG
AACATTCTTTGTGTGTTTCTGGCCAAAAAAAATGCATTTTCCACTAATTT
TCCATGATTTTTTCGTTTCTTTTTTACCCAATATTTTCTTTGATTTATTC
TGACGTCACTTTCTTATGAGAAGTCATTGCATTTAAGAAGTCATTTTTTA
AATCATGTTCAAACTGACGAAACTTTTCTATAAAACAAATTTCCCTTTTC
AAAATCATCGTCAGTTTGACCAAAGCACTGAAGTGGTCTTTACCTGTCTT
TACCGTATTATATTGACCGCTAGAGAACCAATCAAAATAGCGCATTTTCT
TGTATTGACCGGCTTTTACTTCAACCACTTAATAAAGCATGGTATGGGCT
GAGAGTTTGAATTTCCCAGATCCTAATAACGGTTGAATTCGAATTTCCCA
CTGTAAATATTTTGAGGCAGATATGTGCTTCACAGGTCATACCCGTCCTG
TATACATCAGATTATAAAAATACAGGACGGTTCTCCTGTCTAGTACTGCA
GTATGTAGCGGATATTGAAATCTCCTCGTGACTTTTGTATTCAGGAAAAG
TTTATGACGTCACCACTGGTAAACAACATTACGGTAAAGATGGTGCATAT
CATTTCTTTGCTGGCAAAGATGCTTCTAGAGCTTACGTCTCTGGTCAGTT
CAACGATGAAGGGTTGATTGACGACATTACTGGACTACCAGCTGGTCAAT
ATTCGGGCTTGAAGGGTTGGACTGATACTTTCGAAAACAAATACCCTTTT
GTTGGTAAATTAGAAGGTTTCTTTTACGATTCAAAAGGCAATGAAAAAGA
AGGAATTGCTATTTATCGGCAAGGTTTAATTGAAGCATCGAAATTCGAAG
CCGAGGAAAAAGATGATGAGAAAAGGTTTCCAGGATGTAATTCAAGATAT
ACGCCACAAACGGGTCATGAAATTTGGTGCTCCACTAACAGGTTTGCAAA
TCTACTTCAATCTTTTATCAATTATTCTTTAAAACACCCATCATAAACAC
ATATAATCCCTATTAAGGAAGCTAAAAAGACGCTAAGAAATTTCCTACGT
TCAAATGCTGCCACCAGTACCCACTAGAGTGCAAAAATAATTAATTTTCG
GACATCTTAGTAGGGTTACTTATTTTCATTCTTCATCTATAATAAATTTC
TTAAAAGTCACGACAATTTTAGCTTTTTCTCTATCGAACCTATGTTTTAA
GGGATGTCAGACAAGCTTAATACCCCTTGGAAGTATCCTTAGTTATATAT
TTTTTAAATGGTTTACTTAAATATTCATGATTAATATCTATGGTCGCATG
CCCAAACCTTCCGTTAGTGTAGTAGTTGGTGGATCCAACACACTAGCAAT
ATGGAGATGGATTTCTCCCAATTCACCGTCTCTGACCAGTCGGTAGACAA
GAATTCACTTCCAGCTCTACCGAGTGACAATTGAGTCCTCGGGTTCCACA
TGGACCCGTAGCTCAATGGTAGAACAAATGCCCGCGAATGGCATGATTGT
GACTTCGAGTCTCGCAGGATCCGTTGGTTTTCCAACGGTTCTGGTGGCCT
GGTCAGAAGACAACATGAGAGCGACTATATTCACTTCATAAGGGCATGGA
ATATTCATGGTTTACTTAGTATACGTTAATGATCTTTTTTCTCTCCAAGC
CACTAAATCATGATGATTCAAACAGATAAACAACACCAAAATTTTGATTT
TATTAAACAATCAATAATAATAAAATTAAAATTTTGATGATGTTTATTTG
TTTAAGTTTAATTATTTCTTTTTCCATTTTAGTGGGGCTGTCGATCGTGA
TTGGACAGGATATCCCCGAAAGTTTTTCAAACCTGGTCGAACGAATTTCC
GTTGCGCGTGTGTTCCAAAGGCTCTACTATCTGACCCTCGTTTCAAAGAA
TTTGATGGTTGTCCTNTCGTTGTGCGTGTGTTCCAAAGGCTCTACTATCT
GACCCTCGTTTCAAAGAATTTGATGGTTGTCCTACAGACTCTGTAAAATG
TAAGTTGGTCCAATAATGTAGGTGGAGTTGTTTGACTTTATTGCTGGCGG
TTAGTTAATGATATGACTAATGGTAGAATTTGTTTGAGATCACACGTGGT
GTTTTTTATTGATATGATACTTTTGAAAAACTGATTCTTCATTGGTAGAA
AATTCGTCGGCAAAAAAGTATTTAGATAGATTTTGTTTTAAACTGTATGA
GGTTAAAGGCTTGGGAACACGAGTTTTTTTTGCGTTGGTGTAATACAACA
TGCTCCATCCCACCAACCTGAAACGCTTTCTCGTGTCTCCATCCCCATTT
TTCTTTTAATAACATTTTGTGCTTCTCTCACTTTTGTCCCTGGGACAAAA
TCAGCGTGTCTTTTGGGTATTTCCCTCACTTTTTGTCCCATAAAACAAAA
AAGGAAACAATGGGATACGCACTTTTTTTCAGGTTCGTGGGATGAGTATG
TTGCATTGCACCAACGCGAAAAAACTTCTCGTGTCCCCAAGCCTTAAGTT
TATTTATATCGAATTTTTTTAACGATGCATTCTGAAAAGTCTTTGTACTT
TTTCTTGTTTATGGTGATTTTTATACATTATAGAAATAAAGATAAATTTT
CGATGAGGTTCCTTGAATATCTGTTTTGAACCTGCTCTACCTATAATGAG
AAGAAAAAACAGCTCTATCTTGCCAGACTCTTCCCCTTGGAAGATTGTTA
TGCGCAGGTAATTTTTACGAGTTACGCAAATTTAATTAAATTGTTGTGTA
GATTTGTAAATTCCGATTTTTTCTATTTAGTATAACTTAGGACTTAGGCA
GGACTTTTTGAAAATATTGACACGATTTCAGATTTTAGTATTAATTTCTT
AAGTGTGATTAATTACGTGCTTCTCGTACCTTTGTGCCTTTTTGGGTCCC
GAAAAAAATCTCTTGGGATCCCGAAAAAAAAT

Coding sequence (CDS) from alignment at scaffold_315:83199..93530-

>TCONS_00058993 ID=TCONS_00058993|Name=TCONS_00058993|organism=Clytia hemisphaerica|type=CDS|length=4620bp|location=Sequence derived from alignment at scaffold_315:83199..93530- (Clytia hemisphaerica)
GCTCTACTATCTGACCCTCGTTTCAAAGAATTTGATGGTTGTCCTACAGA
CTCTGTAAAATGTAAGTTGGTCCAATAATGGGGCTGTCGATCGTGATTGG
ACAGGATATCCCCGAAAGTTTTTCAAACCTGGTCGAACGAATTTCCGTTG
CGCGTGTGTTCCAAAGGAAAAGTTTATGACGTCACCACTGGTAAACAACA
TTACGGTAAAGATGGTGCATATCATTTCTTTGCTGGCAAAGATGCTTCTA
GAGCTTACGTCTCTGGTCAGTTCAACGATGAAGGGTTGATTGACGACATT
ACTGGACTACCAGCTGGTCAATATTCGGGCTTGAAGGGTTGGACTGATAC
TTTCGAAAACAAATACCCTTTTGTTGGTAAATTAGAAGGTTTCTTTTACG
ATTCAAAAGGCAATGAAAAAGAAGGAATTGCTATTTATCGGCAAGGTTTA
ATTGAAGCATCGAAATTCGAAGCCGAGGAAAAAGATGATGAGAAAAGGTT
TCCAGGATGTAATTCAAGATATACGCCACAAACGGGTCATGAAATTTGGT
GCTCCACTAACAGAAATGGAAGAAGGTAAAACAAACAAAATAAAATTCGA
ACGAAGATGTCCTGGTATTGGTGAGTTTTTAGCTTACACAAGTGTTGTAG
TGGTTGCATGTGCCGTTATAGTACCTCTCGAATTGAAGTATGGTTATTCG
TCAAGAGTATTTAATTCATTCCATATGCATAGCACTAATGACGATAGTGT
ATTGCATACCTTGATCAACATTCTGGGGCTTTTCAAGAAGCCAGCTGCAC
AACAACCAAGTACTGGAGAAAGGATATTCACTAAAGACGAAATCAGACAA
TATTCCGGTGAAGTCGAAGGGAAGCCGATCTATTTAGCATACTTAGGGTG
TTTGCTGCGTCGGTGTTTGTAAAGGCTCTACTATCTGACCCTCGTTTCAA
AGAATTTGATGGTTGTCCTACAGACTCTGTAAAATGTAAGTTGGTCCAAT
AATGGGGCTGTCGATCGTGATTGGACAGGATATCCCCGAAAGTTTTTCAA
ACCTGGTCGAACGAATTTCCGTTGCGCGTGTGTTCCAAAGGAAAAGTTTA
TGACGTCACCACTGGTAAACAACATTACGGTAAAGATGGTGCATATCATT
TCTTTGCTGGCAAAGATGCTTCTAGAGCTTACGTCTCTGGTCAGTTCAAC
GATGAAGGGTTGATTGACGACATTACTGGACTACCAGCTGGTCAATATTC
GGGCTTGAAGGGTTGGACTGATACTTTCGAAAACAAATACCCTTTTGTTG
GTAAATTAGAAGGTTTCTTTTACGATTCAAAAGGCAATGAAAAAGAAGGA
ATTGCTATTTATCGGCAAGGTTTAATTGAAGCATCGAAATTCGAAGCCGA
GGAAAAAGATGATGAGAAAAGGTTTCCAGGATGTAATTCAAGATATACGC
CACAAACGGGTCATGAAATTTGGTGCTCCACTAACAGAAATGGAAGAAGG
TAAAACAAACAAAATAAAATTCGAACGAAGATGTCCTGGTATTGGTGAGT
TTTTAGCTTACACAAGTGTTGTAGTGGTTGCATGTGCCGTTATAGTACCT
CTCGAATTGAAGTATGGTTATTCGTCAAGAGTATTTAATTCATTCCATAT
GCATAGCACTAATGACGATAGTGTATTGCATACCTTGATCAACATTCTGG
GGCTTTTCAAGAAGCCAGCTGCACAACAACCAAGTACTGGAGAAAGGATA
TTCACTAAAGACGAAATCAGACAATATTCCGGTGAAGTCGAAGGGAAGCC
GATCTATTTAGCATACTTAGGGTGTTTGCTGCGTCGGTGTTTGTAAAGGC
TCTACTATCTGACCCTCGTTTCAAAGAATTTGATGGTTGTCCTACAGACT
CTGTAAAATGTAAGTTGGTCCAATAATGGGGCTGTCGATCGTGATTGGAC
AGGATATCCCCGAAAGTTTTTCAAACCTGGTCGAACGAATTTCCGTTGCG
CGTGTGTTCCAAAGGAAAAGTTTATGACGTCACCACTGGTAAACAACATT
ACGGTAAAGATGGTGCATATCATTTCTTTGCTGGCAAAGATGCTTCTAGA
GCTTACGTCTCTGGTCAGTTCAACGATGAAGGGTTGATTGACGACATTAC
TGGACTACCAGCTGGTCAATATTCGGGCTTGAAGGGTTGGACTGATACTT
TCGAAAACAAATACCCTTTTGTTGGTAAATTAGAAGGTTTCTTTTACGAT
TCAAAAGGCAATGAAAAAGAAGGAATTGCTATTTATCGGCAAGGTTTAAT
TGAAGCATCGAAATTCGAAGCCGAGGAAAAAGATGATGAGAAAAGGTTTC
CAGGATGTAATTCAAGATATACGCCACAAACGGGTCATGAAATTTGGTGC
TCCACTAACAGAAATGGAAGAAGGTAAAACAAACAAAATAAAATTCGAAC
GAAGATGTCCTGGTATTGGTGAGTTTTTAGCTTACACAAGTGTTGTAGTG
GTTGCATGTGCCGTTATAGTACCTCTCGAATTGAAGTATGGTTATTCGTC
AAGAGTATTTAATTCATTCCATATGCATAGCACTAATGACGATAGTGTAT
TGCATACCTTGATCAACATTCTGGGGCTTTTCAAGAAGCCAGCTGCACAA
CAACCAAGTACTGGAGAAAGGATATTCACTAAAGACGAAATCAGACAATA
TTCCGGTGAAGTCGAAGGGAAGCCGATCTATTTAGCATACTTAGGGTGTT
TGCTGCGTCGGTGTTTGTAAAGGCTCTACTATCTGACCCTCGTTTCAAAG
AATTTGATGGTTGTCCTACAGACTCTGTAAAATGTAAGTTGGTCCAATAA
TGGGGCTGTCGATCGTGATTGGACAGGATATCCCCGAAAGTTTTTCAAAC
CTGGTCGAACGAATTTCCGTTGCGCGTGTGTTCCAAAGGAAAAGTTTATG
ACGTCACCACTGGTAAACAACATTACGGTAAAGATGGTGCATATCATTTC
TTTGCTGGCAAAGATGCTTCTAGAGCTTACGTCTCTGGTCAGTTCAACGA
TGAAGGGTTGATTGACGACATTACTGGACTACCAGCTGGTCAATATTCGG
GCTTGAAGGGTTGGACTGATACTTTCGAAAACAAATACCCTTTTGTTGGT
AAATTAGAAGGTTTCTTTTACGATTCAAAAGGCAATGAAAAAGAAGGAAT
TGCTATTTATCGGCAAGGTTTAATTGAAGCATCGAAATTCGAAGCCGAGG
AAAAAGATGATGAGAAAAGGTTTCCAGGATGTAATTCAAGATATACGCCA
CAAACGGGTCATGAAATTTGGTGCTCCACTAACAGAAATGGAAGAAGGTA
AAACAAACAAAATAAAATTCGAACGAAGATGTCCTGGTATTGGTGAGTTT
TTAGCTTACACAAGTGTTGTAGTGGTTGCATGTGCCGTTATAGTACCTCT
CGAATTGAAGTATGGTTATTCGTCAAGAGTATTTAATTCATTCCATATGC
ATAGCACTAATGACGATAGTGTATTGCATACCTTGATCAACATTCTGGGG
CTTTTCAAGAAGCCAGCTGCACAACAACCAAGTACTGGAGAAAGGATATT
CACTAAAGACGAAATCAGACAATATTCCGGTGAAGTCGAAGGGAAGCCGA
TCTATTTAGCATACTTAGGGTGTTTGCTGCGTCGGTGTTTGTAAAGGCTC
TACTATCTGACCCTCGTTTCAAAGAATTTGATGGTTGTCCTACAGACTCT
GTAAAATGTAAGTTGGTCCAATAATGGGGCTGTCGATCGTGATTGGACAG
GATATCCCCGAAAGTTTTTCAAACCTGGTCGAACGAATTTCCGTTGCGCG
TGTGTTCCAAAGGAAAAGTTTATGACGTCACCACTGGTAAACAACATTAC
GGTAAAGATGGTGCATATCATTTCTTTGCTGGCAAAGATGCTTCTAGAGC
TTACGTCTCTGGTCAGTTCAACGATGAAGGGTTGATTGACGACATTACTG
GACTACCAGCTGGTCAATATTCGGGCTTGAAGGGTTGGACTGATACTTTC
GAAAACAAATACCCTTTTGTTGGTAAATTAGAAGGTTTCTTTTACGATTC
AAAAGGCAATGAAAAAGAAGGAATTGCTATTTATCGGCAAGGTTTAATTG
AAGCATCGAAATTCGAAGCCGAGGAAAAAGATGATGAGAAAAGGTTTCCA
GGATGTAATTCAAGATATACGCCACAAACGGGTCATGAAATTTGGTGCTC
CACTAACAGAAATGGAAGAAGGTAAAACAAACAAAATAAAATTCGAACGA
AGATGTCCTGGTATTGGTGAGTTTTTAGCTTACACAAGTGTTGTAGTGGT
TGCATGTGCCGTTATAGTACCTCTCGAATTGAAGTATGGTTATTCGTCAA
GAGTATTTAATTCATTCCATATGCATAGCACTAATGACGATAGTGTATTG
CATACCTTGATCAACATTCTGGGGCTTTTCAAGAAGCCAGCTGCACAACA
ACCAAGTACTGGAGAAAGGATATTCACTAAAGACGAAATCAGACAATATT
CCGGTGAAGTCGAAGGGAAGCCGATCTATTTAGCATACTTAGGGTGTTTG
CTGCGTCGGTGTTTGTAAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037153	XLOC_037153	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00058993-protein	TCONS_00058993-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_315	supercontig	scaffold_315:83199..93530 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.1988	25.2629	27.007	32.8129	20.8831	15.6009	20.4106	22.0039	17.0205	16.8156	13.2249	10.4315	7.97405	7.9611	6.23393	6.55042	8.59809	9.57256	1.67922	3.06559	7.06503	6.26125	15.4654	12.8714	16.0217	18.3797	13.1129	9.91993	14.0149	13.5365

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001199	Cyt_B5-like_heme/steroid-bd

Blast

[Close]

BLAST of TCONS_00058993 vs. Swiss-Prot (Human)
Match: NEUFC (Neuferricin OS=Homo sapiens GN=CYB5D2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.343e-44
Identity = 84/235 (35.74%), Postives = 122/235 (51.91%), Query Frame = 2

Query:  272 PSTGERIFTKDEIRQYSGEVEGKPIYLAYLGKVYDVTTGKQHYGKDGAYHFFAGKDASRAYVSGQFNDEGLIDDITGLPAGQYSGLKGWTDTFENKYPFVGKLEGFFYDSKGNEKEGIAIYRQGL---IEASKFEAEEKDDEKRFPGCNSRYTPQTGHEIWCSTNSGAVDRDWTGYPRKFFKPGRTNFRCACV-----PKALLSD------------PRFKEFDGCPTDSVKCKL 916
            P  G R+F  +E+ +Y G      +YLA LG+VYDV++G++HY     Y  FAG+DASRA+V+G  ++ GL+DD++ L A +   L  W   +E  Y  VG++ G FY   G     +      +   +EA+K + +EK   + FP CN+ ++   G  +WCS  SG V RDW G PRK +KPG    RC CV     P   + D            P   E+ GCP  ++ C  
Sbjct:   31 PRAGFRLFIPEELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGLVDDVSDLSAAEMLTLHNWLSFYEKNYVCVGRVTGRFYGEDGLPTPALTQVEAAITRGLEANKLQLQEK---QTFPPCNAEWSSARGSRLWCSQKSGGVSRDWIGVPRKLYKPGAKEPRCVCVRTTGPPSGQMPDNPPHRNRGDLDHPNLAEYTGCPPLAITCSF 262

The following BLAST results are available for this feature:

BLAST of TCONS_00058993 vs. Swiss-Prot (Human)

BLAST of TCONS_00058993 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NEUFC	1.343e-44	35.74	Neuferricin OS=Homo sapiens GN=CYB5D2 PE=2 SV=1	[more]

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TCONS_00058993 (transcript) - C. hemisphaerica