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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058963 ID=TCONS_00058963|Name=TCONS_00058963|organism=Clytia hemisphaerica|type=transcript|length=1465bp
ACCTGATGAAAATCGACATCGCGAATTATGAAATCAAATCTATAAAACCC
ATCCTTATGAAACAAGCAGTAAAATATGAAGACGAAAAGTTCAATGAATT
CCTAAAAGAAAACAAAGGTTAGTTAGATGAGATTTCTTTTATGGAGGGTA
ttcagcatcaaaataattttctgttttCATTTACTCGCCTTCTAGAGTTC
TTATTGctaaattgtttttactttttttctttttagatggtttaaatttg
acaaaaatttggctgaaaaatgcATTGGATATTATTAACTCAATCAGGAG
TCCATCTTCCCAAAACAAAGTTACCCCAGGGGTTGTCATAACAAACGCTT
ACTTGTCATTGTTATTTCCAACCTCTGAACTCTGCCCTGAGGTTAGTTTC
ATGAATATATCTTTCTATTTTTTGCTATAATCaatttaaataataaattg
attaaaaatataatcaattaaaaaaattcagacgTTATTGTCTaaagttt
gtttatatttaaaaaaattgtttatgacATGAAGTTAATGAAtgctttaa
atttttattttcgattCAGACTTTATTTATGGATGAACTTCGTTTGAAAC
AAATTTCTGGACAGTTTGAAGTCTTGATCAATACAGTGTCTTCGTTGACg
tattgtttacattttttgccgCCACACCTCTCCACTGATGAAGACTTCAT
TATTCATTTAAAGAAGACTATTTTTATACTCATTCAAGGATCTAAATggt
aaatatacaaaatattcATTATTGAATGttacattcaaaatattttgaat
ccTTTCTATAGAAATAGTAATGAATAGGCTAAAATATTCATTCTCCCAAT
ATTGAGAGGTCAAACATTGAAATTCAAAGTGATTCCATGTAATTAAGCTC
CCGTTATATAGTTATAATGACCACGTAAGTACAATTAAGATAGCCAGGAT
ATACCTGTCGGAAATTAACTCGTGTTTTCAATGTCGTTGATACCTTTTTG
ATTGTCCCGACATTTCCTGTACATCTATGAAAAAAGCAATCATTAATTCG
ATAGTTAACTATTGAAAAATCTAGCAAAGGTTTGATACCTGTTTGTAAAC
aataaatcttttgttttgaaataaataaaaatgagctAATGAGTCTCGGT
AACTTCCGTCAAGCTCCGTAACATTTTCTTCGTGGATTCATAAGGTTTTT
GGATAGGAATTAGGATTGAAAGTAATAACTAGTCTGTACATCCAGTTTGA
GTTAATTTTAATGTTACAATCATATCGTTTTTTTTCTTAGGGATGAAACT
TTGGTTGAAAGTATTTTCTTGCAAATACAGACAGAGACAGAAAAAGAATG
TAGCAAGCGTGAGATTGAATTGAAGACGCCAGCCCAGTGGGATATTTTGA
GGAACCAACTGAAAGGTTTACTAACAAACGACAAACAAGAACCTAATCAA
CTCAAAACTCTCATC Run BLAST on NCBI transcript from alignment at scaffold_315:219659..221123+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058963 ID=TCONS_00058963|Name=TCONS_00058963|organism=Clytia hemisphaerica|type=transcript|length=1465bp|location=Sequence derived from alignment at scaffold_315:219659..221123+ (Clytia hemisphaerica)
ACCTGATGAAAATCGACATCGCGAATTATGAAATCAAATCTATAAAACCC
ATCCTTATGAAACAAGCAGTAAAATATGAAGACGAAAAGTTCAATGAATT
CCTAAAAGAAAACAAAGGTTAGTTAGATGAGATTTCTTTTATGGAGGGTA
ttcagcatcaaaataattttctgttttCATTTACTCGCCTTCTAGAGTTC
TTATTGctaaattgtttttactttttttctttttagatggtttaaatttg
acaaaaatttggctgaaaaatgcATTGGATATTATTAACTCAATCAGGAG
TCCATCTTCCCAAAACAAAGTTACCCCAGGGGTTGTCATAACAAACGCTT
ACTTGTCATTGTTATTTCCAACCTCTGAACTCTGCCCTGAGGTTAGTTTC
ATGAATATATCTTTCTATTTTTTGCTATAATCaatttaaataataaattg
attaaaaatataatcaattaaaaaaattcagacgTTATTGTCTaaagttt
gtttatatttaaaaaaattgtttatgacATGAAGTTAATGAAtgctttaa
atttttattttcgattCAGACTTTATTTATGGATGAACTTCGTTTGAAAC
AAATTTCTGGACAGTTTGAAGTCTTGATCAATACAGTGTCTTCGTTGACg
tattgtttacattttttgccgCCACACCTCTCCACTGATGAAGACTTCAT
TATTCATTTAAAGAAGACTATTTTTATACTCATTCAAGGATCTAAATggt
aaatatacaaaatattcATTATTGAATGttacattcaaaatattttgaat
ccTTTCTATAGAAATAGTAATGAATAGGCTAAAATATTCATTCTCCCAAT
ATTGAGAGGTCAAACATTGAAATTCAAAGTGATTCCATGTAATTAAGCTC
CCGTTATATAGTTATAATGACCACGTAAGTACAATTAAGATAGCCAGGAT
ATACCTGTCGGAAATTAACTCGTGTTTTCAATGTCGTTGATACCTTTTTG
ATTGTCCCGACATTTCCTGTACATCTATGAAAAAAGCAATCATTAATTCG
ATAGTTAACTATTGAAAAATCTAGCAAAGGTTTGATACCTGTTTGTAAAC
aataaatcttttgttttgaaataaataaaaatgagctAATGAGTCTCGGT
AACTTCCGTCAAGCTCCGTAACATTTTCTTCGTGGATTCATAAGGTTTTT
GGATAGGAATTAGGATTGAAAGTAATAACTAGTCTGTACATCCAGTTTGA
GTTAATTTTAATGTTACAATCATATCGTTTTTTTTCTTAGGGATGAAACT
TTGGTTGAAAGTATTTTCTTGCAAATACAGACAGAGACAGAAAAAGAATG
TAGCAAGCGTGAGATTGAATTGAAGACGCCAGCCCAGTGGGATATTTTGA
GGAACCAACTGAAAGGTTTACTAACAAACGACAAACAAGAACCTAATCAA
CTCAAAACTCTCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058963-exon-scaffold_315-1491911889:219659..221123 | TCONS_00058963-exon-scaffold_315-1491911889:219659..221123 | Clytia hemisphaerica | exon |
| TCONS_00058963-exon-scaffold_315-1510915933:219659..221123 | TCONS_00058963-exon-scaffold_315-1510915933:219659..221123 | Clytia hemisphaerica | exon |
| TCONS_00058963-exon-scaffold_315-1575043694:219659..221123 | TCONS_00058963-exon-scaffold_315-1575043694:219659..221123 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_315 | supercontig | scaffold_315:219659..221123 + |
Blast
The following BLAST results are available for this feature:
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