TCONS_00058976 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058976
Unique NameTCONS_00058976
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2147

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058976 ID=TCONS_00058976|Name=TCONS_00058976|organism=Clytia hemisphaerica|type=transcript|length=2147bp
tttagaccaaaatgtaaacaaaaaagaaaggtTTAGTATTGTCAACAAAT
AAATATGAAGGATGACAGGAGGAATGGAAGGATGGTTCACATTTCAACGT
TACTCTTACACGCCTCTTGGAGAACAACACACGCTTGCTATCAAAGTAGC
AATGGGACAAGTTTTGAAAGAGATATTAAGCCTCCTGTACTGGACCATGC
TTGCGGCCTGCACGGTGGGTCCAGGGACCGTTGTAACATGTGCAAGAGCG
GGTGCTGAATTTGAACTAAACTTAATCTGGGCGTTGATTTTTGCATCAGT
ATTGGCGTACACTTTGCAAGAAGGAACCGCCCGTTTGACTATAACCAGTG
GTCAAAGTTTGGGGCAATGTCTACAAGCTAAATATCGTCATGGTCGACTC
TTTTGGGGCGTTGGTATCATTTGCTGGGTAGTAGCTGGCTCCGTTTTCTT
CGGTAATACACTTTACGAGTGTAATAATTGGGCCGGAGGAATGTCCGCTA
TCTATTCCTTACCGGGTGCCGAAAATACGGTTGGTTTGCGAGTAGGGTGC
TGTATCGCTTATGGTGTTGTTGTGCTTGCCATCCTATTTGCTGATAAAGT
CGATTCACTTGGCATAGGACTGGGGATAGTTATGATTGGAATGGTCACAC
TTTTCTTAGTAGTCGTGGTCAAACTAGGTTTAGATGGAAAAAGATTCGCC
AAAGGACTTCTACCAATTAGTATGCCGTCTGGTTCAGCCAATATCGTGTT
AAGTTTGATCGGAACAACCTCTATTGGCTTCAATTTGTTCCTGGGAGGCA
AAATGGCAGAAGGGAAATCTTTAGGTCAAGCACAGCGTGGAATTGCATTC
TCAACTTTCATGGCGTTGATTGTATCTGTTCTCATATTGATTGTTGGTGA
TGGCACATATATGCAATCTAAAGGACAATTTACTATCGCTAGTTTATCAG
GTATCATTGAAAGGTTGACTGGAGCTGCTGGACTGTGGGTATTTGGTATC
GGTTTCATCGCAGCAGCTTTAAGCTCGATGTTGACCGTACCCTTAGGCGC
TGTTATGACGGCTGAAAGTGTTTTCTCCATACCCCCTGATCAACATGCTG
AATCAATGCATTACAGTAAACCCGGGGCTGAATCAGCCGCCTCCAAAGAA
GAGGAAAACATAGCTATTACACAGAGTAACAGTTCTATGTATCCGGGACG
ACCGTTTCCAAAGAAATATTCTCAGATGTTGATGGTTGTCATGGTTTCCG
TTGCTGTTGTGGTCATATCATGTGATGCACCAACTGTCAAAGTCATCCTC
ATCGCTCAGGTGTTCAACGGGTGTCTTCTACCCTTCTTCTCTATCTGTTT
ATTGGTCTGTTTGAATGATCCTCAATTTATGAAGCAATCACCGCAAAAAG
GATGGTCCAACTGTTTCATGGTTTTTGTTGTCATGGTAACACTGTTCTTG
ACAGCCAATACAATTGTACAAAACATCTTTGGTTGGGTTGTCACAGATGG
TCATAGCTCAGAATCTACATTCGAAATTGTGAAGTTCAGTGTTTCTGGTG
TAGTTTCGTTGACGGTGATGACCTCGTTGTGTGTTTTCACCAGCCTGGGA
GAACACTTGAAGAACAGTTTTGTGCGCGAGGATTGACCAATCAGACATTG
TTCCCACAGTaatagtgagtttatgtattcgaaataaatcgaaggagacg
gtGTGAAGCAAAACTGACATATCGCTAAAATCGCCGTTCACTTTACTCGA
CGAtggtaaaaacaaaaaaataccgtcgtctgtttaggtgagcaaatgCG
ATAAAGAGCCGTATATCAAgaatcgactttgttttgcgtcgacttcactt
accgtcgccctcgatatccacCGACACATAAACAAGGAAGATACCTCTCG
GTAATTTTCCAATGTAATGATTTTTTTAGTTTACAAAAATTACAATGTTA
TATATCATTCTAATTTTCCAAATGTTTGTATATAAGATTATTTTTTAAGT
CAAATTCATAATTTATATATAACTGTTGCTAGTTTGTGAAAGATTATTTT
TTCAGGTACATAATCTAGATTTGATAAATTAATTAGCCaatgtttatttt
taaatttgatagtAAATGTGGCCACTCCACTCAAAGAGCTATCGAAT
Run BLAST on NCBI

protein sequence of TCONS_00058976-protein

>TCONS_00058976-protein ID=TCONS_00058976-protein|Name=TCONS_00058976-protein|organism=Clytia hemisphaerica|type=polypeptide|length=524bp
MTGGMEGWFTFQRYSYTPLGEQHTLAIKVAMGQVLKEILSLLYWTMLAAC
TVGPGTVVTCARAGAEFELNLIWALIFASVLAYTLQEGTARLTITSGQSL
GQCLQAKYRHGRLFWGVGIICWVVAGSVFFGNTLYECNNWAGGMSAIYSL
PGAENTVGLRVGCCIAYGVVVLAILFADKVDSLGIGLGIVMIGMVTLFLV
VVVKLGLDGKRFAKGLLPISMPSGSANIVLSLIGTTSIGFNLFLGGKMAE
GKSLGQAQRGIAFSTFMALIVSVLILIVGDGTYMQSKGQFTIASLSGIIE
RLTGAAGLWVFGIGFIAAALSSMLTVPLGAVMTAESVFSIPPDQHAESMH
YSKPGAESAASKEEENIAITQSNSSMYPGRPFPKKYSQMLMVVMVSVAVV
VISCDAPTVKVILIAQVFNGCLLPFFSICLLVCLNDPQFMKQSPQKGWSN
CFMVFVVMVTLFLTANTIVQNIFGWVVTDGHSSESTFEIVKFSVSGVVSL
TVMTSLCVFTSLGEHLKNSFVRED
Run BLAST on NCBI

transcript from alignment at scaffold_315:378269..381245+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058976 ID=TCONS_00058976|Name=TCONS_00058976|organism=Clytia hemisphaerica|type=transcript|length=2977bp|location=Sequence derived from alignment at scaffold_315:378269..381245+ (Clytia hemisphaerica)
tttagaccaaaatgtaaacaaaaaagaaaggtTTAGTATTGTCAACAAAT AAATATGAAGGATGACAGGAGGAATGGAAGGATGGTTCACATTTCAACGT TACTCTTACACGCCTCTTGGAGAACAACACACGCTTGCTATCAAAGTAGC AATGGGACAAGTTTTGAAAGAGATATTAAGCCTCCTGTACTGGACCATGC TTGCGGCCTGCACGGTGGGTCCAGGGACCGTTGTAACATGTGCAAGAGCG GGTGCTGAATTTGAACTAAACTTAATCTGGGCGTTGATTTTTGCATCAGT ATTGGCGTACACTTTGCAAGAAGGAACCGCCCGTTTGACTATAACCAGTG GTCAAAGTTTGGGGCAATGTCTACAAGCTAAATATCGTCATGGTCGACTC TTTTGGGGCGTTGGTATCATTTGCTGGGTAGTAGCTGGCTCCGTTTTCTT CGGTAagaagttattttttattttattatttctcaAATGATTCGTAAGAT CAAAGGTGTCCAACATATGATCACGACTTAAAAATCATAATTGACTACAT GTTTGAATTTACAACCAATTGTTTGTAGATCCCTTTATCTTAGAAGTGCT CTTAAAACCATatcgaaaaaagatattttctaaaactacTATTACTTCTT ttactctttttaaaaaactatCAATGAAGTACTATAAGGGTATCAATTTT CAAGAACTTGTACATTCTCTTGTTGTTATTTTTAGGTAATACACTTTACG AGTGTAATAATTGGGCCGGAGGAATGTCCGCTATCTATTCCTTACCGGGT GCCGAAAATACGGTTGGTTTGCGAGTAGGGTGCTGTATCGCTTATGGTGT TGTTGTGCTTGCCATCCTATTTGCTGATAAAGTCGATTCACTTGGCATAG GACTGGGGATAGTTATGATTGGAATGGTCACACTTTTCTTAGTAGTCGTG GTCAAACTAGGTTTAGATGGAAAAAGATTCGCCAAAGGACTTCTACCAAT TAGTATGCCGTCTGGTTCAGCCAATATCGTGTTAAGTTTGATCGGAACAA CCTCTATTGGCTTCAATTTGTTCCTGGGAGGCAAAATGGCAGAAGGGAAA TCTTTAGGTCAAGCACAGCGTGGAATTGCATTCTCAACTTTCATGGCGTT GATTGTATCTGTTCTCATATTGATTGTTGGTGATGGCACATATATGCAAT CTAAAGGACAATTTACTATCGCTAGTTTATCAGGTATCATTGAAAGGTTG ACTGGAGCTGCTGGACTGTGGGTATTTGGTATCGGTTTCATCGCAGCAGC TTTAAGCTCGATGTTGACCGTACCCTTAGGCGCTGTTATGACGGCTGAAA GTGTTTTCTCCATACCCCCTGATCAACATGCTGAATCAATGCATTACAGT AAACCCGGGGCTGAATCAGCCGCCTCCAAAGAAGAGGAAAACATAGCTAT TACACAGAGTAACAGTTCTATGTATCCGGGACGACCGTTTCCAAAGAAAT ATTCTCAGATGTTGATGGTTGTCATGGTTTCCGTTGCTGTTGTGGTCATA TCATGTGATGCACCAACTGTCAAAGTCATCCTCATCGCTCAGGTAAATAC TATTATGGGCCATTCCGAGAACTTGTCAACCATGATTGGACCGCTTCTAT GGGTCGTGGAGCTCCTAGGTCCCTCCCTACTCGCGATATCTATTGAGCTT GACGTAAGATACCCTTTATTCTGGAACGACCGTTGTAGAGTGCAAAGTAG TTTTTTTGGTGGTTAATATTTCCCACACAAATTCGAAGCAAATAGTCATA TTCTTTTTAATGatattattttgaaagttttgaattgCTTTACCAGAATC CTTCCTATATAAAAAGTAGTATTTTTaattaatacaccttttcgaccgta gtcgccgATTGCAGCACGGGCATTTTTCTGTccattttaccaccctaaaa ccgtcccaatctTCTCGCACctaagacaatagaaaaaagtgttaaaaaaa ggattggatcaagtttagggtgataaattaaataataaagtggcacgcgc ctgacagCGCGACTAAGGTCGAAAAGGTTATTGTCGTCATGCCTTCACTG TTGCAATCATTCCACTTATTATTTCCATTTTCCATTCAGGTGTTCAACGG GTGTCTTCTACCCTTCTTCTCTATCTGTTTATTGGTCTGTTTGAATGATC CTCAATTTATGAAGCAATCACCGCAAAAAGGATGGTCCAACTGTTTCATG GTTTTTGTTGTCATGGTAACACTGTTCTTGACAGCCAATACAATTGTACA AAACATCTTTGGTTGGGTTGTCACAGATGGTCATAGCTCAGAATCTACAT TCGAAATTGTGAAGTTCAGTGTTTCTGGTGTAGTTTCGTTGACGGTGATG ACCTCGTTGTGTGTTTTCACCAGCCTGGGAGAACACTTGAAGAACAGTTT TGTGCGCGAGGATTGACCAATCAGACATTGTTCCCACAGTaatagtgagt ttatgtattcgaaataaatcgaaggagacggtGTGAAGCAAAACTGACAT ATCGCTAAAATCGCCGTTCACTTTACTCGACGAtggtaaaaacaaaaaaa taccgtcgtctgtttaggtgagcaaatgCGATAAAGAGCCGTATATCAAg aatcgactttgttttgcgtcgacttcacttaccgtcgccctcgatatcca cCGACACATAAACAAGGAAGATACCTCTCGGTAATTTTCCAATGTAATGA TTTTTTTAGTTTACAAAAATTACAATGTTATATATCATTCTAATTTTCCA AATGTTTGTATATAAGATTATTTTTTAAGTCAAATTCATAATTTATATAT AACTGTTGCTAGTTTGTGAAAGATTATTTTTTCAGGTACATAATCTAGAT TTGATAAATTAATTAGCCaatgtttatttttaaatttgatagtAAATGTG GCCACTCCACTCAAAGAGCTATCGAAT

Coding sequence (CDS) from alignment at scaffold_315:378269..381245+

>TCONS_00058976 ID=TCONS_00058976|Name=TCONS_00058976|organism=Clytia hemisphaerica|type=CDS|length=4725bp|location=Sequence derived from alignment at scaffold_315:378269..381245+ (Clytia hemisphaerica)
ATGACAGGAGGAATGGAAGGATGGTTCACATTTCAACGTTACTCTTACAC
GCCTCTTGGAGAACAACACACGCTTGCTATCAAAGTAGCAATGGGACAAG
TTTTGAAAGAGATATTAAGCCTCCTGTACTGGACCATGCTTGCGGCCTGC
ACGGTGGGTCCAGGGACCGTTGTAACATGTGCAAGAGCGGGTGCTGAATT
TGAACTAAACTTAATCTGGGCGTTGATTTTTGCATCAGTATTGGCGTACA
CTTTGCAAGAAGGAACCGCCCGTTTGACTATAACCAGTGGTCAAAGTTTG
GGGCAATGTCTACAAGCTAAATATCGTCATGGTCGACTCTTTTGGGGCGT
TGGTATCATTTGCTGGGTAGTAGCTGGCTCCGTTTTCTTCGGTAATACAC
TTTACGAGTGTAATAATTGGGCCGGAGGAATGTCCGCTATCTATTCCTTA
CCGGGTGCCGAAAATACGGTTGGTTTGCGAGTAGGGTGCTGTATCGCTTA
TGGTGTTGTTGTGCTTGCCATCCTATTTGCTGATAAAGTCGATTCACTTG
GCATAGGACTGGGGATAGTTATGATTGGAATGGTCACACTTTTCTTAGTA
GTCGTGGTCAAACTAGGTTTAGATGGAAAAAGATTCGCCAAAGGACTTCT
ACCAATTAGTATGCCGTCTGGTTCAGCCAATATCGTGTTAAGTTTGATCG
GAACAACCTCTATTGGCTTCAATTTGTTCCTGGGAGGCAAAATGGCAGAA
GGGAAATCTTTAGGTCAAGCACAGCGTGGAATTGCATTCTCAACTTTCAT
GGCGTTGATTGTATCTGTTCTCATATTGATTGTTGGTGATGGCACATATA
TGCAATCTAAAGGACAATTTACTATCGCTAGTTTATCAGGTATCATTGAA
AGGTTGACTGGAGCTGCTGGACTGTGGGTATTTGGTATCGGTTTCATCGC
AGCAGCTTTAAGCTCGATGTTGACCGTACCCTTAGGCGCTGTTATGACGG
CTGAAAGTGTTTTCTCCATACCCCCTGATCAACATGCTGAATCAATGCAT
TACAGTAAACCCGGGGCTGAATCAGCCGCCTCCAAAGAAGAGGAAAACAT
AGCTATTACACAGAGTAACAGTTCTATGTATCCGGGACGACCGTTTCCAA
AGAAATATTCTCAGATGTTGATGGTTGTCATGGTTTCCGTTGCTGTTGTG
GTCATATCATGTGATGCACCAACTGTCAAAGTCATCCTCATCGCTCAGGT
GTTCAACGGGTGTCTTCTACCCTTCTTCTCTATCTGTTTATTGGTCTGTT
TGAATGATCCTCAATTTATGAAGCAATCACCGCAAAAAGGATGGTCCAAC
TGTTTCATGGTTTTTGTTGTCATGGTAACACTGTTCTTGACAGCCAATAC
AATTGTACAAAACATCTTTGGTTGGGTTGTCACAGATGGTCATAGCTCAG
AATCTACATTCGAAATTGTGAAGTTCAGTGTTTCTGGTGTAGTTTCGTTG
ACGGTGATGACCTCGTTGTGTGTTTTCACCAGCCTGGGAGAACACTTGAA
GAACAGTTTTGTGCGCGAGGATTGAATGACAGGAGGAATGGAAGGATGGT
TCACATTTCAACGTTACTCTTACACGCCTCTTGGAGAACAACACACGCTT
GCTATCAAAGTAGCAATGGGACAAGTTTTGAAAGAGATATTAAGCCTCCT
GTACTGGACCATGCTTGCGGCCTGCACGGTGGGTCCAGGGACCGTTGTAA
CATGTGCAAGAGCGGGTGCTGAATTTGAACTAAACTTAATCTGGGCGTTG
ATTTTTGCATCAGTATTGGCGTACACTTTGCAAGAAGGAACCGCCCGTTT
GACTATAACCAGTGGTCAAAGTTTGGGGCAATGTCTACAAGCTAAATATC
GTCATGGTCGACTCTTTTGGGGCGTTGGTATCATTTGCTGGGTAGTAGCT
GGCTCCGTTTTCTTCGGTAATACACTTTACGAGTGTAATAATTGGGCCGG
AGGAATGTCCGCTATCTATTCCTTACCGGGTGCCGAAAATACGGTTGGTT
TGCGAGTAGGGTGCTGTATCGCTTATGGTGTTGTTGTGCTTGCCATCCTA
TTTGCTGATAAAGTCGATTCACTTGGCATAGGACTGGGGATAGTTATGAT
TGGAATGGTCACACTTTTCTTAGTAGTCGTGGTCAAACTAGGTTTAGATG
GAAAAAGATTCGCCAAAGGACTTCTACCAATTAGTATGCCGTCTGGTTCA
GCCAATATCGTGTTAAGTTTGATCGGAACAACCTCTATTGGCTTCAATTT
GTTCCTGGGAGGCAAAATGGCAGAAGGGAAATCTTTAGGTCAAGCACAGC
GTGGAATTGCATTCTCAACTTTCATGGCGTTGATTGTATCTGTTCTCATA
TTGATTGTTGGTGATGGCACATATATGCAATCTAAAGGACAATTTACTAT
CGCTAGTTTATCAGGTATCATTGAAAGGTTGACTGGAGCTGCTGGACTGT
GGGTATTTGGTATCGGTTTCATCGCAGCAGCTTTAAGCTCGATGTTGACC
GTACCCTTAGGCGCTGTTATGACGGCTGAAAGTGTTTTCTCCATACCCCC
TGATCAACATGCTGAATCAATGCATTACAGTAAACCCGGGGCTGAATCAG
CCGCCTCCAAAGAAGAGGAAAACATAGCTATTACACAGAGTAACAGTTCT
ATGTATCCGGGACGACCGTTTCCAAAGAAATATTCTCAGATGTTGATGGT
TGTCATGGTTTCCGTTGCTGTTGTGGTCATATCATGTGATGCACCAACTG
TCAAAGTCATCCTCATCGCTCAGGTGTTCAACGGGTGTCTTCTACCCTTC
TTCTCTATCTGTTTATTGGTCTGTTTGAATGATCCTCAATTTATGAAGCA
ATCACCGCAAAAAGGATGGTCCAACTGTTTCATGGTTTTTGTTGTCATGG
TAACACTGTTCTTGACAGCCAATACAATTGTACAAAACATCTTTGGTTGG
GTTGTCACAGATGGTCATAGCTCAGAATCTACATTCGAAATTGTGAAGTT
CAGTGTTTCTGGTGTAGTTTCGTTGACGGTGATGACCTCGTTGTGTGTTT
TCACCAGCCTGGGAGAACACTTGAAGAACAGTTTTGTGCGCGAGGATTGA
ATGACAGGAGGAATGGAAGGATGGTTCACATTTCAACGTTACTCTTACAC
GCCTCTTGGAGAACAACACACGCTTGCTATCAAAGTAGCAATGGGACAAG
TTTTGAAAGAGATATTAAGCCTCCTGTACTGGACCATGCTTGCGGCCTGC
ACGGTGGGTCCAGGGACCGTTGTAACATGTGCAAGAGCGGGTGCTGAATT
TGAACTAAACTTAATCTGGGCGTTGATTTTTGCATCAGTATTGGCGTACA
CTTTGCAAGAAGGAACCGCCCGTTTGACTATAACCAGTGGTCAAAGTTTG
GGGCAATGTCTACAAGCTAAATATCGTCATGGTCGACTCTTTTGGGGCGT
TGGTATCATTTGCTGGGTAGTAGCTGGCTCCGTTTTCTTCGGTAATACAC
TTTACGAGTGTAATAATTGGGCCGGAGGAATGTCCGCTATCTATTCCTTA
CCGGGTGCCGAAAATACGGTTGGTTTGCGAGTAGGGTGCTGTATCGCTTA
TGGTGTTGTTGTGCTTGCCATCCTATTTGCTGATAAAGTCGATTCACTTG
GCATAGGACTGGGGATAGTTATGATTGGAATGGTCACACTTTTCTTAGTA
GTCGTGGTCAAACTAGGTTTAGATGGAAAAAGATTCGCCAAAGGACTTCT
ACCAATTAGTATGCCGTCTGGTTCAGCCAATATCGTGTTAAGTTTGATCG
GAACAACCTCTATTGGCTTCAATTTGTTCCTGGGAGGCAAAATGGCAGAA
GGGAAATCTTTAGGTCAAGCACAGCGTGGAATTGCATTCTCAACTTTCAT
GGCGTTGATTGTATCTGTTCTCATATTGATTGTTGGTGATGGCACATATA
TGCAATCTAAAGGACAATTTACTATCGCTAGTTTATCAGGTATCATTGAA
AGGTTGACTGGAGCTGCTGGACTGTGGGTATTTGGTATCGGTTTCATCGC
AGCAGCTTTAAGCTCGATGTTGACCGTACCCTTAGGCGCTGTTATGACGG
CTGAAAGTGTTTTCTCCATACCCCCTGATCAACATGCTGAATCAATGCAT
TACAGTAAACCCGGGGCTGAATCAGCCGCCTCCAAAGAAGAGGAAAACAT
AGCTATTACACAGAGTAACAGTTCTATGTATCCGGGACGACCGTTTCCAA
AGAAATATTCTCAGATGTTGATGGTTGTCATGGTTTCCGTTGCTGTTGTG
GTCATATCATGTGATGCACCAACTGTCAAAGTCATCCTCATCGCTCAGGT
GTTCAACGGGTGTCTTCTACCCTTCTTCTCTATCTGTTTATTGGTCTGTT
TGAATGATCCTCAATTTATGAAGCAATCACCGCAAAAAGGATGGTCCAAC
TGTTTCATGGTTTTTGTTGTCATGGTAACACTGTTCTTGACAGCCAATAC
AATTGTACAAAACATCTTTGGTTGGGTTGTCACAGATGGTCATAGCTCAG
AATCTACATTCGAAATTGTGAAGTTCAGTGTTTCTGGTGTAGTTTCGTTG
ACGGTGATGACCTCGTTGTGTGTTTTCACCAGCCTGGGAGAACACTTGAA
GAACAGTTTTGTGCGCGAGGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037146XLOC_037146Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058976-proteinTCONS_00058976-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058976-exon-scaffold_315-1491911889:378269..378720TCONS_00058976-exon-scaffold_315-1491911889:378269..378720Clytia hemisphaericaexon
TCONS_00058976-exon-scaffold_315-1510915933:378269..378720TCONS_00058976-exon-scaffold_315-1510915933:378269..378720Clytia hemisphaericaexon
TCONS_00058976-exon-scaffold_315-1575043694:378269..378720TCONS_00058976-exon-scaffold_315-1575043694:378269..378720Clytia hemisphaericaexon
TCONS_00058976-exon-scaffold_315-1491911889:379004..379860TCONS_00058976-exon-scaffold_315-1491911889:379004..379860Clytia hemisphaericaexon
TCONS_00058976-exon-scaffold_315-1510915933:379004..379860TCONS_00058976-exon-scaffold_315-1510915933:379004..379860Clytia hemisphaericaexon
TCONS_00058976-exon-scaffold_315-1575043694:379004..379860TCONS_00058976-exon-scaffold_315-1575043694:379004..379860Clytia hemisphaericaexon
TCONS_00058976-exon-scaffold_315-1491911889:380408..381245TCONS_00058976-exon-scaffold_315-1491911889:380408..381245Clytia hemisphaericaexon
TCONS_00058976-exon-scaffold_315-1510915933:380408..381245TCONS_00058976-exon-scaffold_315-1510915933:380408..381245Clytia hemisphaericaexon
TCONS_00058976-exon-scaffold_315-1575043694:380408..381245TCONS_00058976-exon-scaffold_315-1575043694:380408..381245Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_315supercontigscaffold_315:378269..381245 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.86725 1.90014 0.685958 0.384895 4.19682 3.79861 3.80313 4.11681 5.74071 5.88536 5.55745 4.2728 15.1766 15.3972 13.1496 12.5357 13.602 13.8007 21.1472 18.4594 12.6906 13.8305 9.1935 8.62538 17.9116 14.6402 3.33852 2.70571 3.96214 4.2024
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001046NRAMP_fam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058976 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top