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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059097 ID=TCONS_00059097|Name=TCONS_00059097|organism=Clytia hemisphaerica|type=transcript|length=1461bp
CTAATTTTGTTTAAGATTTCAATTAAGTATATATACTGTATTAAGCAAAG
GTAGTTAAAAGATTTCCCACAAACAGTTAGTCGCGTTAGCATCCCACcga
aatgtgtatcaaagattaatgctgccaTTGCACTATATCGGTTACTTGAC
TcagaagcaaaaaaatgcatcaCAAAACTTCTAAtaggattcatgaaaaa
ataaactggcgctttttaatgaaattaacatttttatgagaaattaccaa
aattttgagccatagatgaaaaaatttgaaccgAAACAACgtaaccttga
aaactaatttgaagaacaacttctcaagaaaaaaatattcaggGGAGAAG
ACACCCACCTAGATCGACATGCACCAACAAATAGGCTATTTCCCCGGAAT
TTTTTCCCGACCTGAATATCTCcgttatatattttgaaaaagaattttcc
cataaaacaatgaaatgtaCGATTGAAGTAAAGATGGCAGGTGAAGCAAT
GGATGGaatagttaaaaaaattcagacaatttTGCGACTTCCTGACTCAA
AATAGTCGGAAAATTAAGAGAAATTATCAGTCGGTCGGACGacaaacaca
agttatttgtgattgtgGCCTAAACCAATCTAGATATTGGTAAACAATGA
CTGTTAGCTGTAAAATCTGTAAAGTTATTGGTAATCGAACGAATCGCTAC
ATGGAAGGTCACATATCTCAAATATCTTTGGTCGTTTTTAAGCATTCCAT
TTGCCTGGACCTAGACCTTCAAATGATACCAAAAGTGCAATCAAATCTAT
ATAGAGTTTCTTCAGGAAATTTGCAATTCAATTTGATTGTCCATTCTGTT
TGATTGGATATGATGATGATATTGACTCAAAAGTTTGACTTTTATAGCGT
GACCTGACCAATCCAACGTTtgctctgttttgtttttgccatATATCAAT
TTTGTTTAACTGTATATCAATAAGTATTTCATACAATACATATATACATC
TAGATTGTCATACTCATATAAAAAGTTCAATAAGTTTCACGGTGTTTCAT
GCATCATGTTGCATGGCACAATGTTGAATAACATCAATGTAAACAATGGT
AGTAAAAACTTGCATGAAGATCATAATCATCCGCCAGCATGATTCAACAC
CATtgactttttggaaattttatttccaGTCACCAACCATTTCATATTGA
TTCATCTTGTTTTTCTGGTAAAAAAGTTGTTAGTTATTGATTGCTCGCTT
AATACTCGAGCAAATCTTAATATGGATCAAATAGTTGTGTCATGTTGGCA
TGAATGAAGAAACCAAGCTTCAACGtaagtttgttgttttttggatGCAG
GCATCAGCCATCTTTTGATTGgaaaacataaaagacaaacctccaaaatg
tgatcggctattgctcattccgacattttaaattttccgggggttttgct
gtTTGGGATTG Run BLAST on NCBI transcript from alignment at scaffold_316:128742..130202 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059097 ID=TCONS_00059097|Name=TCONS_00059097|organism=Clytia hemisphaerica|type=transcript|length=1461bp|location=Sequence derived from alignment at scaffold_316:128742..130202 (Clytia hemisphaerica)
CAATCCCAAacagcaaaacccccggaaaatttaaaatgtcggaatgagca
atagccgatcacattttggaggtttgtcttttatgttttcCAATCAAAAG
ATGGCTGATGCCTGCatccaaaaaacaacaaacttaCGTTGAAGCTTGGT
TTCTTCATTCATGCCAACATGACACAACTATTTGATCCATATTAAGATTT
GCTCGAGTATTAAGCGAGCAATCAATAACTAACAACTTTTTTACCAGAAA
AACAAGATGAATCAATATGAAATGGTTGGTGACtggaaataaaatttcca
aaaagtcaATGGTGTTGAATCATGCTGGCGGATGATTATGATCTTCATGC
AAGTTTTTACTACCATTGTTTACATTGATGTTATTCAACATTGTGCCATG
CAACATGATGCATGAAACACCGTGAAACTTATTGAACTTTTTATATGAGT
ATGACAATCTAGATGTATATATGTATTGTATGAAATACTTATTGATATAC
AGTTAAACAAAATTGATATatggcaaaaacaaaacagagcaAACGTTGGA
TTGGTCAGGTCACGCTATAAAAGTCAAACTTTTGAGTCAATATCATCATC
ATATCCAATCAAACAGAATGGACAATCAAATTGAATTGCAAATTTCCTGA
AGAAACTCTATATAGATTTGATTGCACTTTTGGTATCATTTGAAGGTCTA
GGTCCAGGCAAATGGAATGCTTAAAAACGACCAAAGATATTTGAGATATG
TGACCTTCCATGTAGCGATTCGTTCGATTACCAATAACTTTACAGATTTT
ACAGCTAACAGTCATTGTTTACCAATATCTAGATTGGTTTAGGCcacaat
cacaaataacttgtgtttgtCGTCCGACCGACTGATAATTTCTCTTAATT
TTCCGACTATTTTGAGTCAGGAAGTCGCAaaattgtctgaatttttttaa
ctattCCATCCATTGCTTCACCTGCCATCTTTACTTCAATCGtacatttc
attgttttatgggaaaattctttttcaaaatatataacgGAGATATTCAG
GTCGGGAAAAAATTCCGGGGAAATAGCCTATTTGTTGGTGCATGTCGATC
TAGGTGGGTGTCTTCTCCcctgaatatttttttcttgagaagttgttctt
caaattagttttcaaggttacGTTGTTTcggttcaaattttttcatctat
ggctcaaaattttggtaatttctcataaaaatgttaatttcattaaaaag
cgccagtttattttttcatgaatcctaTTAGAAGTTTTGtgatgcatttt
tttgcttctgAGTCAAGTAACCGATATAGTGCAAtggcagcattaatctt
tgatacacatttcgGTGGGATGCTAACGCGACTAACTGTTTGTGGGAAAT
CTTTTAACTACCTTTGCTTAATACAGTATATATACTTAATTGAAATCTTA
AACAAAATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059097-exon-scaffold_316-1491911889:128742..130202 | TCONS_00059097-exon-scaffold_316-1491911889:128742..130202 | Clytia hemisphaerica | exon |
| TCONS_00059097-exon-scaffold_316-1510915933:128742..130202 | TCONS_00059097-exon-scaffold_316-1510915933:128742..130202 | Clytia hemisphaerica | exon |
| TCONS_00059097-exon-scaffold_316-1575043694:128742..130202 | TCONS_00059097-exon-scaffold_316-1575043694:128742..130202 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_316 | supercontig | scaffold_316:128742..130202 . |
Blast
The following BLAST results are available for this feature:
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