TCONS_00059214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059214
Unique NameTCONS_00059214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length243

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059214 ID=TCONS_00059214|Name=TCONS_00059214|organism=Clytia hemisphaerica|type=transcript|length=243bp
GTTAATATGAATGGTTTACACCTTACACAGTATTCAGATTTCTggctggg
aaaatattccaatgGGATAGAAAATTGTTTGCAGTTATtagtttaaagca
attttataTTTGTAACGAATACCCTATTTTCAGAATGCTAATATTATTTC
AGTCTAAAGTTTGTACACCTACAGGCAatgatttctttcttttcaagaaa
aactttaCCAAAATACAGCTGCAAAAGTTCACAAGTAAATGAG
Run BLAST on NCBI

transcript from alignment at scaffold_319:232390..232632

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059214 ID=TCONS_00059214|Name=TCONS_00059214|organism=Clytia hemisphaerica|type=transcript|length=243bp|location=Sequence derived from alignment at scaffold_319:232390..232632 (Clytia hemisphaerica)
CTCATTTACTTGTGAACTTTTGCAGCTGTATTTTGGtaaagtttttcttg
aaaagaaagaaatcatTGCCTGTAGGTGTACAAACTTTAGACTGAAATAA
TATTAGCATTCTGAAAATAGGGTATTCGTTACAAAtataaaattgcttta
aactaATAACTGCAAACAATTTTCTATCCcattggaatattttcccagcc
AGAAATCTGAATACTGTGTAAGGTGTAAACCATTCATATTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037291XLOC_037291Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059214-exon-scaffold_319-1491911889:232390..232632TCONS_00059214-exon-scaffold_319-1491911889:232390..232632Clytia hemisphaericaexon
TCONS_00059214-exon-scaffold_319-1510915933:232390..232632TCONS_00059214-exon-scaffold_319-1510915933:232390..232632Clytia hemisphaericaexon
TCONS_00059214-exon-scaffold_319-1575043694:232390..232632TCONS_00059214-exon-scaffold_319-1575043694:232390..232632Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_319supercontigscaffold_319:232390..232632 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.857115	0.835822	3.88188	3.79781	1.15587	1.82676	0	0	0	0	4.34186	0	0.57004	0	0	0	0	0	0	4.76717	0	2.42529	0.982751	3.57385	0	0.821298	1.17527	2.50857	2.85399	2.90777
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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