TCONS_00059254 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059254
Unique NameTCONS_00059254
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2498

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059254 ID=TCONS_00059254|Name=TCONS_00059254|organism=Clytia hemisphaerica|type=transcript|length=2498bp
TAAACGATTTATATCAGCATTTCCAGAACAACAACATCGAGTCCCACATG
TATGCTTCACAATGGTTCTTGACCTTATTCACAGCCAAGTTTCCGCTTTC
CCTGGTTTTCAATATCATTGATATCATCTTTTGTGAGGACCTTGATTCAA
TTTTCCAAATAGCTGCTGCACTTCTAAAGACAGCACGGAAGGATTTACTA
CAATTGGATTTCGAAGGGATATTAAAATACTTTCGTATCAACATGCCAAA
ATATTACATGTTGGAACCACACAGAAAAGATCTTGTCAAAACTATCTACG
ATATTAAGATTTCCAAGAAGAAGGTGACCAAGTACAAACAAGAATACGTT
CAAATGAAGGAAGAACAAGAACTAAAAGAAGACCCTGTGGAAAGATTAAA
GAGAGAAAATGGTGAACTTCAAATGGAGAAATTACGCTTAGAACGTGAGA
ATGACAGTTTAGCATACGAAGTTGTCACAACTCAAGTCTCAATGCAAGAA
ATCATCACTGATAGAGAAGAGAAATTGAACGAGATGATTAAAGAAACGGA
ACAATTACGTAATCATTTAACTGACGCCGAAGAAGAAGCGGAAAGACTGA
AAGTTGAAGAAGCAAGGGTCAAAGACATGTGGCGTGATAGCATGAGACAG
GCTGATGAAAATAAAGCAAAACTAAATCGAATCATTGATGATTATAAACA
GATTTTGGCTCGACTAGAAGAACGCAACGAAAAATTAAAACGAGATTTCA
CTGCTGAAACAGAACTGCTGAAGAAACAGTTATCAACGTGCGAGAACTGT
ACGAACGCTTTGATGAAAAACATTTATCCAGACGAGGATGACAAGGGCGG
ACCGAGAGAACCAACCATCACTAAATTACTCTCCAAAGAGGATCACGAAG
AACAGATGCGTAGCTTAGAAGAAGAGCTCATTAAAACAAAAGTCGCACTG
GCGGAAGAAAAAAATCGCGCGGACGAAATCGAAATGAAATTACACAATTT
GATGAGTGCGAACGAGAAGCCGTGGTATAAGAAGGTAACTGTGATTAAAA
AATAGTAttgttttggaaatttgtttgtttctttgttgtttgAAATTAGT
TGtatataattattataaatagCTCTCTAACTCTCCTATTataaaatgtt
atcaaaattGCTGCTTCGATAGAAGTTTAGTTTTTCTCGTGTAGCAAATC
TTTGGTTTTTGTTACTCAGAGCATATTTACGTGTGTAGTCCACTCTGAGA
TATTCTGAAGTTTACCAAAATTGTGAATTCTaacttttttacactttttt
cacTACCAACTTATACGAGTattaaaatacaccttttcgaccgtaaccaa
ttgccgcgcgggcatttttttgtccactttatccCGAGTttagatcgagt
ttagggggataattactgaccgcgcgactacggtcgaaaaggtgtatatc
tccccctcccccttccccgaaaaaaaaaacaaaaaaacgtgtGGACCGCA
ATGCACTTTGCTGTTTAAATGGAAATTTCgagattttcatatttttaaaa
tttagtgTGTATTTATTTCTAAAAGCAGAAAAAGTATagatatttctatt
tttatacTACATACAAGAAATAAAATTCGTTTCGAAATTCTCGCGATTCG
ACggattttattttttgtcttcatttttttacgaaaaacaaattatttag
ttttcaaattgaatttttttttctgttgcttTTAGAAGCATTACATTGTT
TTCcttgttttgtgtttttctttttagatgtTATTTGTCAGTTAGTCCTT
TTATATTAACTCTTCactgttcttttctttttttctctcgtCCCTTAGCC
TAAAGTAGACGTCACATGCGTTTTTTCTATGCAATTAACGtatattccac
tttgcgactttttcgaatgtttggagctcAGATTTTTGGAACTTTCGAAg
cggtgtcgaggaaaaagctGTGGTCATCTGGTACAGACAATCAAAGCTCT
AGCGaacacctcactaaaaaccgggatttttcatctcgtttcttagtgag
ttcctctttgacaatttttgaaaaatagaaataagtcctaaatgttcatt
cttttttatgcATGTTTGAATCTCTATTCGACTTTTATTTGTATCTTCCT
ATGTGTTTTATTACAACCTTCATGTTTGGCCCTGAAATGCAATACTATAT
TTTGGTTAAACATAAAATTCTAGATATAATGTAATTAGAATTCAACTGta
tttaaaagtaaaataaacagggatatttttttgtttgttacgGTCTAAAC
TTTTTTATTACCTTATCAATAGTAGATGTATATTGCCTCCTCTAAGGATT
CCTAATGTCTGGTTTCTTACTAGTAGTCATGCCTAGAGTGATCATTTCAT
GATACGGAAACTTCCGATAAATACCGAGCGCTTGCCACTGCCGTACTTAc
ttataacaatccaaaagttcccttACCAATCAAAAGCGCCAAAATCTC
Run BLAST on NCBI

transcript from alignment at scaffold_320:233915..240649-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059254 ID=TCONS_00059254|Name=TCONS_00059254|organism=Clytia hemisphaerica|type=transcript|length=6735bp|location=Sequence derived from alignment at scaffold_320:233915..240649- (Clytia hemisphaerica)
TAAACGATTTATATCAGCATTTCCAGAACAACAACATCGAGTCCCACATG
TATGCTTCACAATGGTTCTTGACCTTATTCACAGCCAAGTTTCCGCTTTC
CCTGGTTTTCAATATCATTGATATCATCTTTTGTGAGGTATGTACGCTTA
AACCTGTTACAATGCGATTTCCTTTTCATGTTAACCCGGCATTGTACAGT
GGAGTCTCTTTGATCCGAACCTTTAGATCTCAAGTTTTCTAGTCCTTTCA
GTTAACAATGCCTTATAAACCTTACTTCATAACTCGAAAATCTCCTTAAC
TCGAACAAACTTGCGTTTTCCGTGCGTGTTAGAGTTTTGGAGACTCTACT
GTAGCACCCCTTTAACTTGATATTGATCTAGGTGCAAATTATTTGAACTT
TTTTCCGTGCAACCTTTTCCCTGGATTGTATTGGATTAGACATTATTCTG
ATTTAAATAATTTCACCGCTTGTTTATTTTCAGGACCTTGATTCAATTTT
CCAAATAGCTGCTGCACTTCTAAAGGTAAATTCAAGTATGCATGTGACGT
ATCTTTCCGCGAAACTCGGTTTAACTTTATCTATTACTTACTGGTAGACA
ATGTTCTAGTCAAAAATGTCGTCAAAAACCGTCAAAAGTTAGCCACGGCG
TTTTGATTCTTAACCTAGTCTAGCTCACTGGACATATAATTTACTCGTTT
TCCGCTATTTTTCTTGGTTACAATCTTCTATCTTTCTAATTTTCAGACAG
CACGGAAGGATTTACTACAATTGGATTTCGAAGGGATATTAAAATACTTT
CGTATCAACATGCCAAAATATTACATGTTGGAACCACACAGAAAAGATCT
TGTCAAAACTATCTACGATATTAAGGTATCATTTGTTAGAGCTCTGATAA
AAATCCTACACGATTCAAGCAAACGTTATGAATCCGGCAAATTATTAAGA
TTTGTCGAAGATCACAAGGTTTTCTTACTTTACACTAAGGCTATTATACA
GTGAACTTTCCAATTGGGTCTTAAAGGTATTAAGGTTGTTTTTTTTGAAT
CGGAAAAATGTTATCTCTTGTAGAGCTTCTTGGCTGAAGGTACCATAGAT
TTAGTTCGAGCTACAAGAAGGCTTGAAGCAGATTAAAATTAGAAAAAATC
AACTGTGTACCCTGATTTAGGATCACCATATACCCAAACTAATTGTCTGA
AATGCAGACCTCTATAGATATACTTCCTATACAAAAAACTCTTTTCGCTA
GAGCATGAGCAGAAGCCTGCCGTGCATGTGACGTTGTTTGGAGGGCGTTG
TAATCTTTTAGATTACCTTTGCCCATTGTGGATTTTGTTATAAACAACTT
GGTTTCTGTATTCAGCTTACTGAAGATTAAAGAATTTTTATGCTAAAAAA
GCATAAGCAGAAGCCTGCCAAACTAACTTCTAAACAAGTTTCCATTAATC
TAATAAAATTCATTTCATCCATGGGGACGAGATGGAGTTTTTACAAGCTC
TTATTTGATTTGGTTGGTCGTTAACCAGTAATAAAACAATAAAGAAGGCG
TCATTTTTGTCCATCCATATCCATCCATCATGATTTCTCCCTCATTCATT
AGATTTCCAAGAAGAAGGTGACCAAGTACAAACAAGAATACGTTCAAATG
AAGGAAGAACAAGAACTAAAAGAAGACCCTGTGGAAAGATTAAAGGTTAG
ATTTGATATTGCTGCTTTCACTCTGGGATAAAGTCTCGTTACTTTGGTAT
CATTATTCCACTAAAAGATTGAAAATGAAAGTTTTTGATCCCGCAACGCC
CTTTCAACGCCCTTTTGAAGGGCAGAACTATGCCTCAAAAAAGTTATCTT
TGCCTTCAATAGTGTAGGGATGCCGGGCTGAGATTTGTATCCTATTCTAC
TCCTAATAGAGTCCCGGTACCAGTGTCTCTAATACTATTAACCAGTAATG
ATAATGCCAGATAACGTCGAGTTGATTATTGTGAGGCATTATTAAAAACC
TTAGTTCTATCCATTTTAATATTTTTCATTCTTCCTATCTGTTTTAGAGA
GAAAATGGTGAACTTCAAATGGAGAAATTACGCTTAGAACGTGAGAATGA
CAGTTTAGCATACGAAGTTGTCACAACTCAAGTCTCAATGCAAGAAATCA
TCACTGATGTATACTTTTTGTTCATTTTTGGTCCTTTTGCGTCTTTCCTA
TTACATTTTTTCTAAATTCTTTTTTCTTGGCATTACTCGTTAAAGTCGCC
ACATTTAGCCTTTTTTCAAAAGGAAACCGCCCTGGAATTTGGGTTCACTT
AAGGTGTTTTAGATTGGCTTTTTATCTTTGGACTTGAAATCTGTATATAG
CTCCCTACAGTTGACTTTCTCTCCCTCTCTGATCTCTATCATCCGAATCT
TTCTGTAATCCAAGCTAGTACATTGGTCACCTGACCTGGAAATTCGTATA
AATTACTCTCCGTAATGATAATCTTTCCCTAATTCGAACAAGAAAGTTTG
GCCCCTTGAAGCCTTTTGGATTTCTGACCTCGATTTTGTTTTCATTTTCC
GCAGAGAGAAGAGAAATTGAACGAGATGATTAAAGAAACGGAACAATTAC
GTAATCATTTAACTGACGCCGAAGAAGAAGCGGAAAGACTGAAAGTTGAA
GAAGCAAGGGTATAAAAGTTGTTTTGTGTTTTGTTTGTTATCTTTTTCAG
ATATTTTCGCTGTTCCTATTACCAAGAATGGTCTTAAGTGTTGGACCGGC
ATGATTTTGAAACAATTTACACTTGATCTTTATCAGTTTGATGTTGTTTC
AAGGATTTTGTTGCCTAGGTTATATAACCTAGTTATCCACGAGCTGATAT
TTTTGGTGCTTACAATTTGACTTATAGAGACATTTTCTTGACCATAATTT
ACATAATAAACTTGTTTCATTCATTCATTCAATCATTCGTTCATTCATTC
AATCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCAT
TCGAGCGGTAACAATAATGGTTTATTATTTTTCTTTCATATTCAGGTCAA
AGACATGTGGCGTGATAGCATGAGACAGGCTGATGAAAATAAAGCAAAAC
TAAATCGAATCATTGATGATTATAAACAGGTACTATTATAGCCTGTCTAC
GTTTATTCTTACTCATTCTTCTTTTGTTTTAATCCCTCACCCCTACCAGT
CGACAAAACTATGTGATATCGAAATACTAAAATTGGTTGGCAGTGTTGCC
CAAAATATTCCGAACTGATTCGAAAACAACTATAACACTGAAAAAATGGT
TCACCAAAAGCTCCTGCATGTTGTGATGGTAAATGTTTGCATATTTTTAC
ATAATTTCAGACTCCCTCAATCCCCGAGTTTTCCAGGGTTTTCAGGTACA
CCTTTACAGATATATGACCTTCCCAATATGAGGGGTTTTACTTGAGCCCA
GTCGTAGGGATGCTTGAGAATGGCTTCTGTTTCCATTGCTAAGTCTCACG
TTTTACGTATACTTCATTTCCCTACTTTAGATTTTGGCTCGACTAGAAGA
ACGCAACGAAAAATTAAAACGAGATTTCACTGCTGAAACAGAACTGCTGA
AGGTAAGGAGAAATGAAATAGGTCCATAGTTTATCCTATATTTCGATCTC
AACAAAGCCTTCTTCTATCAAAATCTATCATTTTCATTTGAAAAAAAAAT
TGATTTGAACCGAGATCATGAGACGTAGGTCCAGCAGCGTTTTGCTTACT
TTTGTTTGAGACTGTTTTCTGGCTTCATTTCTCATTTTGGAAAAATATGA
TAGACATTTTATTCTCAGTGTAAAGAGATTTTTCAAGTTGGCTAAACATA
CAAAATTATCAGTATCAATCTTCATAAGGAATCGTTTCTTCAAAATCGAA
TGTTTTCATCAATAATGAGGGGTTTTCCTGTATGTAACACAACCTTGCTC
TATTATAGACCTCTATTATAGAATCAGGTCAAATTTGGGAAATTCTTAAC
TTTCACCATTGTTCATGGCACTTTTTCAATGATTCTTCCAATCTTCTTTA
TAGAAACAGTTATCAACGTGCGAGAACTGTACGAACGCTTTGATGAAAAA
CATTTATCCAGACGAGGATGACAAGGGCGGACCGAGAGAACCAACCATCA
CTAAATTACTCTCCAAAGAGGATCACGAAGAACAGATGCGTAGCTTAGAA
GAAGAGCTCATTAAAACAAAAGTCGCACTGGCGGAAGAAAAAAATCGCGC
GGACGAAATCGAAATGAAATTACACAATTTGATGAGTGCGAACGAGAAGC
CGTGGTATAAGAAGGTAACTGTGATTAAAAAATAGTATTGTTTTGGAAAT
TTGTTTGTTTGTTTGTTGTTTGAAATTAGTTGTATATAATTATTATAAAT
AGCTCTCTAACTCTCCTATTATAAAATGTTATCAAAATTGCTGCTTCGAT
AGAAGTTTAGTTTTTCTCGTGTAGCAAATCTTTGGTTTTTGTTACTCAGA
GCATATTTACGTGTGTAGTCCACTCTGAGATATTCTGAAGTTTACCAAAA
TTGTGACTTTTTTACACTTTTTTCACTAANCATAGTTTATCCTATATTTC
GATCTCAACAAAGCCTTCTTCTATCAAAATCTATCATTTTCATTTGAAAA
AAAAATTGATTTGAACCGAGATTATGAGACGTAGGTCCAGCAGCGTTTTG
CTTACTTTTGTTTGAGACTGTTTTCTGGCTTCATTTCTCATTTTGGAAAA
ATATGATTAGACATTTTATTCTCAGTGTAAAGAGATTTTTCAAGTTGGCT
AAACATACAAAATTATCAGTATCAATCTTCATAAGGAATCGTTTCTTCAA
AATCGAATGTTTTCATCAATAATGAGGGGTTTTCCTGTATGTAACACAAC
CTTGCTCTATTATAGACCTCTATTATAGAATCAGGTCAAATTTGGGAAAT
TCTTAACTTTCACCATTGTTCATGGCACTTTTTCAATGATTCTTCCAATC
TTCTTTATAGAAACAGTTATCAACGTGCGAGAACTGTACGAACGCTTTGA
TGAAAAACATTTATCCAGACGAGGATGACAAGGGCGGACCGAGAGAACCA
ACCATCACTAAATTACTCTCCAAAGAGGATCACGAAGAACAGATGCGTAG
CTTAGAAGAAGAGCTCATTAAAACAAAAGTCGCACTGGCGGAAGAAAAAA
ATCGCGCGGACGAAATCGAAATGAAATTACACAATTTGATGAGTGCGAAC
GAGAAGCCGTGGTATAAGAAGGTAACTGTGATTAAAAAATAGTATTGTTT
TGGAAATTTGTTTGTTTCTTTGTTGTTTGAAATTAGTTGTATATAATTAT
TATAAATAGCTCTCTAACTCTCCTATTATAAAATGTTATCAAAATTGCTG
CTTCGATAGAAGTTTAGTTTTTCTCGTGTAGCAAATCTTTGGTTTTTGTT
ACTCAGAGCATATTTACGTGTGTAGTCCACTCTGAGATATTCTGAAGTTT
ACCAAAATTGTGAATTCTAACTTTTTTACACTTTTTTCACTACCAACTTA
TACGAGTATTAAAATACACCTTTTCGACCGTAACCAATTGCCGCGCGGGC
ATTTTTTTGTCCACTTTATCCCGAGTTTAGATCGAGTTTAGGGGGATAAT
TACTGACCGCGCGACTACGGTCGAAAAGGTGTATATCTCCCCCTCCCCCT
TCCCCGAAAAAAAAAACAAAAAAACGTGTGGACCGCAATGCACTTTGCTG
TTTAAATGGAAATTTCGAGATTTTCATATTTTTAAAATTTAGTGTGTATT
TATTTCTAAAAGCAGAAAAAGTATAGATATTTCTATTTTTATACTACATA
CAAGAAATAAAATTCGTTTCGAAATTCTCGCGATTCGACGGATTTTATTT
TTTGTCTTCATTTTTTTACGAAAAACAAATTATTTAGTTTTCAAATTGAA
TTTTTTTTTCTGTTGCTTTTAGAAGCATTACATTGTTTTCCTTGTTTTGT
GTTTTTCTTTTTAGATGTTATTTGTCAGTTAGTCCTTTTATATTAACTCT
TCACTGTTCTTTTCTTTTTTTCTCTCGTCCCTTAGCCTAAAGTAGACGTC
ACATGCGTTTTTTCTATGCAATTAACGTATATTCCACTTTGCGACTTTTT
CGAATGTTTGGAGCTCAGATTTTTGGAACTTTCGAAGCGGTGTCGAGGAA
AAAGCTGTGGTCATCTGGTACAGACAATCAAAGCTCTAGCGAACACCTCA
CTAAAAACCGGGATTTTTCATCTCGTTTCTTAGTGAGTTCCTCTTTGACA
ATTTTTGAAAAATAGAAATAAGTCCTAAATGTTCATTCTTTTTTATGCAT
GTTTGAATCTCTATTCGACTTTTATTTGTATCTTCCTATGTGTTTTATTA
CAACCTTCATGTTTGGCCCTGAAATGCAATACTATATTTTGGTTAAACAT
AAAATTCTAGATATAATGTAATTAGAATTCAACTGTATTTAAAAGTAAAA
TAAACAGGGATATTTTTTTGTTTGTTACGGTCTAAACTTTTTTATTACCT
TATCAATAGTAGATGTATATTGCCTCCTCTAAGGATTCCTAATGTCTGGT
TTCTTACTAGTAGTCATGCCTAGAGTGATCATTTCATGATACGGAAACTT
CCGATAAATACCGAGCGCTTGCCACTGCCGTACTTACTTATAACAATCCA
AAAGTTCCCTTACCAATCAAAAGCGCCAAAATCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037310XLOC_037310Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059254-exon-scaffold_320-1575043694:240513..240649TCONS_00059254-exon-scaffold_320-1575043694:240513..240649Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1575043694:240125..240166TCONS_00059254-exon-scaffold_320-1575043694:240125..240166Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1575043694:239775..239903TCONS_00059254-exon-scaffold_320-1575043694:239775..239903Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1575043694:238955..239047TCONS_00059254-exon-scaffold_320-1575043694:238955..239047Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1575043694:238492..238602TCONS_00059254-exon-scaffold_320-1575043694:238492..238602Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1575043694:237991..238095TCONS_00059254-exon-scaffold_320-1575043694:237991..238095Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1575043694:237521..237604TCONS_00059254-exon-scaffold_320-1575043694:237521..237604Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1575043694:237048..237119TCONS_00059254-exon-scaffold_320-1575043694:237048..237119Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1575043694:233915..235639TCONS_00059254-exon-scaffold_320-1575043694:233915..235639Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:240513..240649TCONS_00059254-exon-scaffold_320-1510915933:240513..240649Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:240125..240166TCONS_00059254-exon-scaffold_320-1510915933:240125..240166Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:239775..239903TCONS_00059254-exon-scaffold_320-1510915933:239775..239903Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:238955..239047TCONS_00059254-exon-scaffold_320-1510915933:238955..239047Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:238492..238602TCONS_00059254-exon-scaffold_320-1510915933:238492..238602Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:237991..238095TCONS_00059254-exon-scaffold_320-1510915933:237991..238095Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:237521..237604TCONS_00059254-exon-scaffold_320-1510915933:237521..237604Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:237048..237119TCONS_00059254-exon-scaffold_320-1510915933:237048..237119Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1510915933:233915..235639TCONS_00059254-exon-scaffold_320-1510915933:233915..235639Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:240513..240649TCONS_00059254-exon-scaffold_320-1491911889:240513..240649Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:240125..240166TCONS_00059254-exon-scaffold_320-1491911889:240125..240166Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:239775..239903TCONS_00059254-exon-scaffold_320-1491911889:239775..239903Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:238955..239047TCONS_00059254-exon-scaffold_320-1491911889:238955..239047Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:238492..238602TCONS_00059254-exon-scaffold_320-1491911889:238492..238602Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:237991..238095TCONS_00059254-exon-scaffold_320-1491911889:237991..238095Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:237521..237604TCONS_00059254-exon-scaffold_320-1491911889:237521..237604Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:237048..237119TCONS_00059254-exon-scaffold_320-1491911889:237048..237119Clytia hemisphaericaexon
TCONS_00059254-exon-scaffold_320-1491911889:233915..235639TCONS_00059254-exon-scaffold_320-1491911889:233915..235639Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_320supercontigscaffold_320:233915..240649 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.249626	0.226677	0.140202	0.145124	2.31068	1.68256	2.19399	1.94231	0.970504	1.2212	0.82172	0.806957	0.512804	0.871302	0.638321	0.710149	0.929885	0.782607	1.16205	1.17719	2.62234	2.84115	1.15533	1.04774	1.01999	1.44439	3.01813	1.77834	9.26046	7.94459
Blast
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BLAST of TCONS_00059254 vs. Swiss-Prot (Human)
Match: RBGP1 (Rab GTPase-activating protein 1 OS=Homo sapiens GN=RABGAP1 PE=1 SV=3)

HSP 1 Score: 216.083 bits (549), Expect = 2.453e-58
Identity = 147/354 (41.53%), Postives = 225/354 (63.56%), Query Frame = 3 
Query:    6 DLYQHFQNNNIESHMYASQWFLTLFTAKFPLSLVFNIIDIIFCEDLDSIFQIAAALLKTARKDLLQLDFEGILKYFRINMPKYYMLEPHRKDLVKTIYDIXXXXXXXXXXXQEYVQMKEEQELKEDPVERLKRENGELQMEKLRLERENDSLAYEVVTTQVSMQEIITDREEKLNEMIKETEQLRNHLTDXXXXXXXXXXXXXXXKDMWRDSMRQADENKAKLNRIIDDYKQILARLEERNEKLKRDFTAETELLKKQLSTCENCTNALMKNIYPDEDDKGGPREPTITKLLSKEDHEE-------QMRSLEEELIKTKVALAEEKNRADEIEMKLH---NLMSANEKPWYKKV 1037
            DLY HF + ++E+HMYASQWFLTLFTAKFPL +VF+IID++ CE +  IF +A  LLKT++ DLL  DFEG LK+FR+ +PK Y  E + K L++   ++KIS+KK+ KY++EY  M+E+Q  +EDP+ER +REN  LQ   +RLE+END LA+E+VT+++++++ + + EEK + + KE    +  L DAEEE  RL+ E A++K+M R  + +A+    K + II DYKQI ++L ER EK +     E E +++++  CE C     K        +G  +  + TK +  ED +E       Q+R +E EL +TK+ L E + +  ++E  L    N + A +K W+ + 
Sbjct:  708 DLYNHFLDISLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGALKFFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFERENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEEEKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKVEIEKIRQKVDDCERCREFFNK--------EGRVKGISSTKEVLDEDTDEEKETLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRT 1053
The following BLAST results are available for this feature:
BLAST of TCONS_00059254 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RBGP12.453e-5841.53Rab GTPase-activating protein 1 OS=Homo sapiens GN... [more]
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