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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059281 ID=TCONS_00059281|Name=TCONS_00059281|organism=Clytia hemisphaerica|type=transcript|length=1096bp
AATCAAACTACCTTTAAAATTTGgatgcaaaagaaaaaagagcttGGATA
TACACAGAAAACACACAGTGCATTTGCACATTTTCTGGTAACACATCTGA
CTGCTGCTGGTGAGAGTGAAAGTGAACCAGAAACTGATTCCTCAAACAGC
CAACAAAGTGAAACAGATGAAGAAATAATTGTTGCTGatgtttttgaaag
tgatgACGAACAACAGACTGTTGATGTCACTGGTGGTCTAGAACCTGAAC
ATGATGATGGCAATGCTCTTCTTCAGCAAGATACNTAGCGACTCCAGagg
tcatgcaactttcgttgacatcaaaccaaatgtttcatttttccgtgaac
tttgaacccttggaactttttttctatgtatgctaaagcgttccggtttt
tactaaatgaaagcccgtgatcttagctttccagcggtatataacactgt
ggacacgggctagactgcaaattggtaaaatgctgagcgttttgcaacat
tttgaaaattgtttgccgacaggagaaaaacattttgcaactatcgaaga
acaaatgtgtctggaaacggaggaaaatgtatttggaggctgaaactttg
tatgtttatcagaaaaagggtgaggaagtcaaaaatcacaatcgctaatt
ctagttctttcattttcatgtaccGTAGGTCGGGGAAACTTCGGAATGAA
GGAAACTTCGGACTAAAATCTTTAACAAGCGATTACTTCGCGAGGATTTA
ACATTTTATcgtacttttttctttcacagtTCAGAAATGAAGTACACTCG
ACGATACATATCAAGCGACGAAACGCCgaaagaaaaacgaagaagaaatt
gaagaaaaccaCGATATTTTACCATCTTCCATTGTAAAGAGATTTGTTCG
ATATCTAAAGCGGCGACCTCATAATTTTATGTACGTGATGAAAAGAGGAG
ACATTGAATGTCACGTTAAAAGTTATTTGGGCTAAAAATAAGCATTCCTC
AATCTTCAATAGCTCTTCAAAGTTGCTCCATAAATTCGCCGAGAAAGTCA
CTGCGAGAATAGCTTTACCGTCAGCCGAGAAAGATCTTCTTTAAAN Run BLAST on NCBI transcript from alignment at scaffold_323:34694..35789 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059281 ID=TCONS_00059281|Name=TCONS_00059281|organism=Clytia hemisphaerica|type=transcript|length=1096bp|location=Sequence derived from alignment at scaffold_323:34694..35789 (Clytia hemisphaerica)
NTTTAAAGAAGATCTTTCTCGGCTGACGGTAAAGCTATTCTCGCAGTGAC
TTTCTCGGCGAATTTATGGAGCAACTTTGAAGAGCTATTGAAGATTGAGG
AATGCTTATTTTTAGCCCAAATAACTTTTAACGTGACATTCAATGTCTCC
TCTTTTCATCACGTACATAAAATTATGAGGTCGCCGCTTTAGATATCGAA
CAAATCTCTTTACAATGGAAGATGGTAAAATATCGtggttttcttcaatt
tcttcttcgtttttctttcGGCGTTTCGTCGCTTGATATGTATCGTCGAG
TGTACTTCATTTCTGAactgtgaaagaaaaaagtacgATAAAATGTTAAA
TCCTCGCGAAGTAATCGCTTGTTAAAGATTTTAGTCCGAAGTTTCCTTCA
TTCCGAAGTTTCCCCGACCTACggtacatgaaaatgaaagaactagaatt
agcgattgtgatttttgacttcctcaccctttttctgataaacatacaaa
gtttcagcctccaaatacattttcctccgtttccagacacatttgttctt
cgatagttgcaaaatgtttttctcctgtcggcaaacaattttcaaaatgt
tgcaaaacgctcagcattttaccaatttgcagtctagcccgtgtccacag
tgttatataccgctggaaagctaagatcacgggctttcatttagtaaaaa
ccggaacgctttagcatacatagaaaaaaagttccaagggttcaaagttc
acggaaaaatgaaacatttggtttgatgtcaacgaaagttgcatgacctC
TGGAGTCGCTANGTATCTTGCTGAAGAAGAGCATTGCCATCATCATGTTC
AGGTTCTAGACCACCAGTGACATCAACAGTCTGTTGTTCGTcatcacttt
caaaaacatCAGCAACAATTATTTCTTCATCTGTTTCACTTTGTTGGCTG
TTTGAGGAATCAGTTTCTGGTTCACTTTCACTCTCACCAGCAGCAGTCAG
ATGTGTTACCAGAAAATGTGCAAATGCACTGTGTGTTTTCTGTGTATATC
CaagctcttttttcttttgcatcCAAATTTTAAAGGTAGTTTGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059281-exon-scaffold_323-1491911889:34694..35789 | TCONS_00059281-exon-scaffold_323-1491911889:34694..35789 | Clytia hemisphaerica | exon |
| TCONS_00059281-exon-scaffold_323-1510915933:34694..35789 | TCONS_00059281-exon-scaffold_323-1510915933:34694..35789 | Clytia hemisphaerica | exon |
| TCONS_00059281-exon-scaffold_323-1575043694:34694..35789 | TCONS_00059281-exon-scaffold_323-1575043694:34694..35789 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_323 | supercontig | scaffold_323:34694..35789 . |
Blast
The following BLAST results are available for this feature:
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