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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059307 ID=TCONS_00059307|Name=TCONS_00059307|organism=Clytia hemisphaerica|type=transcript|length=974bp
attttttcttgttttattaCTGTATTTTAATCGTTACGTTAAAGTCGTCG
CTCAAGTAGAAAATTGACGGTTCCATGATGCCTCCAAAGAAGAAAGGGAA
GAAACGATCTTCAACCGAATCAAAAGAAGACCCCGAATTGAATTATGAGA
GCGCAACTGACTTATTGTCACCTTCTGAAGTTGTCAAAATGCGTAAGAAG
ACACAGCCTGCAACATCAGCAACAGCTGAACAATCACCTGTCAAAGATAT
CCCAAAAGATAAGGATAAAGCAATAGTGAAAAAGAGTAAAACTCAACAGA
AGTCTGGCAAAAAGGATAAAGATAAATCAGATCTAGAGAAGAAGAAGGac
aataaaaagaaagaaaagggcGATGGAAAACACTCCGAACATAGAAAGCT
GAAAGGGATGAAAGAAAAACGCAAATCACTGAAAAAGCCAAGTCAATCAG
GAGAAAATGAAGATATTGATCTTTCCTCAGTCATTTATCCATGTGGTGTT
TGTAACAAAGAGGTTGTTGACTCTGATGAAGCTATCTTATGTGAAGCAGG
CTGTGAATTCTGGTACCATACTAAATGTGCTGGTATGACTGATGTTGCTT
ACTTGCTGTTGACTAAGGAGGACCATGCTGAATGGGTCTGTGATAAGTGT
ATAGCATCAAAATCTGTACGATTAGTCAAAACGAAAAGTGTCCTTGAGAC
CTCCCCGTAACACTGATACTTTCTATTCTATTAAAGTttttattaaaatc
aatttttaaaataaaatgcatAATGTAGTCCTTGTCAATATacatttttt
aggatttttttgtacatataGCTCCTATTATTATTTATTTGCtctcaaat
ttttgtaaaaagatttttatataattttaagtTTTACTTCCCTTGCATGT
ACATGCAATggaatgcaaaatatttttattatctTTAGGGGCAGTTGTTC
ATTCAGGTAGTCTTTCAAGCTCCA Run BLAST on NCBI protein sequence of TCONS_00059307-protein >TCONS_00059307-protein ID=TCONS_00059307-protein|Name=TCONS_00059307-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MMPPKKKGKKRSSTESKEDPELNYESATDLLSPSEVVKMRKKTQPATSAT
AEQSPVKDIPKDKDKAIVKKSKTQQKSGKKDKDKSDLEKKKDNKKKEKGD
GKHSEHRKLKGMKEKRKSLKKPSQSGENEDIDLSSVIYPCGVCNKEVVDS
DEAILCEAGCEFWYHTKCAGMTDVAYLLLTKEDHAEWVCDKCIASKSVRL
VKTKSVLETSP Run BLAST on NCBI transcript from alignment at scaffold_326:37067..54573+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059307 ID=TCONS_00059307|Name=TCONS_00059307|organism=Clytia hemisphaerica|type=transcript|length=17507bp|location=Sequence derived from alignment at scaffold_326:37067..54573+ (Clytia hemisphaerica)
attttttcttgttttattaCTGTATTTTAATCGTTACGTTAAAGTCGTCG
CTCAAGTAGAAAATTGACGGGTGAGTAAATTTAGCAAATTCTTCATTCAT
CACTATATTATCGCCTTATTTTAAGTTAATCCTTTGTTTGCTACTGGGCC
AGGATGGGAAAATGGATTGATTTAAAACTTGAATGGGAAACTGCAAATGC
AATCTACTATAAAGGACAAACTTTTAGGCAGTAGAGTACACTTAAGGATG
GTAGCTATTCAGAATTTCAACACTGGTGCTCTGCCTAGGCAAGATCATCG
ATTTTCAGGCCTCCCCAGCCGTCCTGTATTTTGTATTTCCGGTATTCTga
tattttcctatttttttccTGGTTTTTCCTGTATTTCATCAAATATTCCT
GTATTTTACTGTATTTTCAGACCAGCTTTAGCCAAAAGTTTTAGTTTAAA
TCAACGAAGcctgtcagttagtcacactaggaaatctagctttcagaaaa
aacaacatcagtcatctacaggatgNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNataaaacgtgcagcagccaaatat
caaccaaccaaattttgtcattcaattcccgagacagcgcttcgattttt
aaggccttgtttatacgttaaagtaaaaatatttccgcacatgtaaagtt
gatcttcaaattagttttcaagtttggcttggctcaaattttttcatcta
tggctcaaattttaggcaatttctcaaagtttttgaaaatgttaatttca
ttaaaaagcgccgggttattttttgatgaatccctttagaagttttgcgg
cgcatttttttgcttgagagtcaagtaaacgaaatagcgctttcgcagca
ttaatctttgatacgcattttggcgggacgctagtgtttCTAACTGCCTG
TCACAAATCTTTGCATTGTTACATTGGAATCTGTTTAAGGTTTAAACAGT
TAAACTAACAGTTCACCCCCCCATTATTTACCATTAGATTTTAAACAGTC
TTTCTATAGCAATTGCTTGTTTTTTAGATTACCTCATTTACATGATGGTA
CTTTGatactttttaatatttttggcttttttacCCCGTTCTCACTGCTT
AAGATTCAGTCATTTCAGGCATAGCTTTTTAGTTGctcttatttttgttt
ttttggagcCTCCTTCTTGATcgtaaaaaattgttcttataaaaaagatc
ttcctcaatgaaatcatgaactCCAACCAagttagcaactccagaagatt
tttcaagttttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatgaa
tttataataattacaaaaaacaaaaagtttgatacttcattagtgaaata
ttcaataaattcctggtttcaattttcagtgggcgttcttctagggtttc
gtttatcgcgcaattcttgcgtcacacaaactttctcggccgctcgtaat
aattatacattgccaaatttggttctccattgtctagtcaggatcgatgg
tgacgtcacctaagcataaaaaagaaaggatttcgtcagttttatgcata
tattaatttgcgagatattctatttgccacgcgagcgcacttttcgtaga
ctagtcggagtactttcttttactcgggggattgatggtaacttttcatc
ttcgttatttttaaaatgaagcacaaccgaaaaaaatggaaacttcagaa
agttgcgtatttccagtgagtaaacgactctgacaattaaaaaaattgat
gatgatgattttttttcggtcatgccaatgtctcgtattgggggttctag
tcttgagcccaaagcctacgcaggattgcagcgtttgggtaaacgagaca
aaactctaaaaaagctggtgttttgacgcgcttccgtgctctcgaaatat
cgcggtttgagacgcactgCTAATTTCTTTTCTCCCGTTggcaaacaatt
tttaaaatgttgcaaaacgttcagcattttaccaatttgccgtctagcgc
ccgtgtccacagtgttatataccgctgaaaagctaagatcacgggctttc
atttagtaaaaaccggaacgctttagcatacatagaagaaaagttacaag
ggttcaaagttcacggaaaaatgaaacatttggtttgacgtcaacgaaag
ttacATGACTTCTGGATTCGCTAACCAAGTTCTTGTTAATATCTTTCACT
AGTTTTATTATTATCAGTGaagctggaacttcgatttttgaggattacaa
ttttaccaaatttttagcgatttttgcctcgctaacccaaatctcgcaac
ctctttaccttaaaggaagatcgaaattagagtttttcagcattccgaaa
aaaacacaaagcaatcatttttcatcttcacaggagcgattctcaacaac
aaaatacatcttttggtctttgggtttgtttctgacgtttttccttcaaa
taatatcgatcactttccttttcccctcaaacgcgcaagaaaaaaatgat
tagctcgcattcttGCGCgagcgaataaagatgaggcggcaatcttgcac
tgagggtgctacttagtttccgcccttttttgcgcccacaatagaatgAT
CCAAATACGGAGGTATTCCATatgataaacgatgtcgttttgtaagtgtt
tattttctaagagatattattaacttatttatttaagtatttttgaaccc
aaatttaaatatctcgttaaataaaaaacaaatgatagcagttccgtttt
tcctcaaacccccgggaaaagtttttttgccgacttagctattctacaaa
tttcgaaaaagaactcccataggaattccgatacataacccgattggttc
atttcggaacggcttcaagaaagtcataatggcagatgattttaaaagtt
tctgaggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagatga
ttttaaaagtttctgaggaaatgtgtggaatttatcaatgttgatggctt
gttgattctttaaagaaaaaagataacaggtatagctttttctaatatcg
aggttccagctacactgattaTAGTATAtcaatttaccatttttttagtG
CTATTTTATACATGAAAGTGCTGAGAAATTCCTgtattttgattgaaaga
atTGGAAAATCCCATTTTTATACATAATTGAGGCTGGGAGGCCTGGATTT
TGTAGAACATAGAGGTCATCCAGACGGTCTTAAAATTTGAtcatcgatta
aaatcgatacCATGAAGTTACCcgttgcatcagtggaggcaaacatgcat
agccatcaaatgactgaccactcaaatcagcaaaatttcaaaacaaatga
actacgcagcttcgctcgcaactctactctaccatttttgttttgatttt
taagcttattgtattttaatgaccagacaggtcattcatttgagggctat
gcatgtttgcctccactgatgcaagttacccaactttaCGGTAGATATta
accagacggtactaatcgaacaTTAGTAATAAACataagtaatcaataat
gatcgaaGGTGGTCAGTGACCGCCTATCAATTTTTTATCGGTGATCCAAT
ACTCACTTGACTCcagattatggcattttcttcgAACATTTTGgatttgt
tcaatcatttcgatTACTTTTCCATTACCTtcaatcatattgaatacctt
cgattattgagtactttccagcctttgattttatcaaatatgtttccagt
AGCAGCAAGTCAGAATAATCTGAAACTTCGGCCAATTAAAACATGcgatt
cacgcgcgaaaaacactttcgttttctccgaccaatcagaatgtgtgata
tgagttacttgaggaaacccGCGGGAATaggcagtatagacctaactctt
catacaaaaattacgggaaacgcatttggactttgtaccctatgctgcac
acaagcacttttttccttttatttgcaaaagttctaggaatgaaaataca
GGGATAATGATAATATCCACTGACGATCCGTGTCCGTGGCACTATCGTTA
AGTTGGCGGGCGTTCTGCAAGCGTtttcggctcaatcctcggattgtgtt
aaaaatggtagactcagctgtgacagatcatttcgatggaagttgttgga
ttgtttacaagactcttggTCGCGCTTGCAACGCAACGCTAATTGCAtaa
ggctacactgatagttttttcaggcggctgcaaacagaaaatcctttgtt
ttaatGTCAATGATGATGACAGtgctgttattaattttgttagatctgac
atattgatgtttgtaagtacactttatagttttgattcccattgaagaat
catattctggtttttatGTTATTAGTTGCTGTTTTCGAGCTTTAGACAGG
GTGTCTACGgtaccttgaaaaccttgaaaaccttgaaaactatcaatttt
ctgggaaaaaccttgaaaaccttgaaaaatcgttaaaaaccttgaaattc
aCTATCCAGTCAttcaaaaagtaagaataagtaaaaaaccgcctgcggcg
ctaaacctttataacatgtagagaattccatatttccctgtttctgttgc
gattctgtcacatatttttttatcattagctgagtttttgtcactaattt
tccGTTTGCATTCAAGCCCTAAGAATCAACTgttccccaattttcaaatc
gcttcaggacgtcttggaataatggccgttcatctataaaattttgagga
ttccttaaaacaactcttttggcaattgacttttgcttaaaaaaaatcaa
aaacaaggcgTTTTTTAGTCATTTGAAagagtcaaaatcaaaattttctc
tcgtcggcgcaaaccatggttgcgcctcctcggtcactgtaaacaattgg
ttttgcttctaattctttatttctacagttAGTAGAGGGtgttttgtaaa
atcgctcgattgttttggtcaaagcacttgttataccgggtgtctctgaa
aaaacttccccctAGTCCAGTGGCTTATTACAATAATACTTCAGTTTGtg
aaaaaagcatgaaacttgGCACAGTCATGCACAATTgtattctgagcaaa
aaaattgacagagaCACGTCTGAAAACCACGtgtctgctgacgtcagcac
ttttttgctgacgtcatgaaaatattttgaaggtaTCCAAACCATCAAGT
ATTATATACCATTGGAAAGGAAATTCaattctgaacaacttttttgcttg
cAGTTTTTACTGAAAACGAAGTCAATAAAAGTTAGAAGCCTCTGAAGctg
acttgtgacgtcatcaaaaattttcaaaaaatttatagtTACAAACCACC
aagtattatataccgttggaaaggaaatttcatcctgaacaacttttttg
cttacgatttttcataaaaatgatgTCAATAATATTTAAAGAAGACTTGT
gacgtcttcaaaaattttcagtaTATATTTACAGTATGTAAAGTTGGAAA
GGATAATTCATGCTGAATACATTTTTGCTGACATTTTATTATGAaaacta
ttcaataaaaactagaCGTCAAAGTGAACGCTGCTTGTGACATTTCAAAA
ATAGTCAGTATCTTTCTACCAATTAAAATATTTACGCTAAGAAACCTTAA
CTTTTCGCcattatttttccttcaaaactgAAACAAGGGACGGAAACTTA
TACTAATAGGCTAATCACTAACACTCTATACTCTTAACCACGGTATTAAA
GATCCCCTGACGCAATGGAAAataaagagatagaaaataatTCCAGGCTA
GGTAACAAAATGGCTTACGTTAAAAATTATTTCACGATCATAAAATATCT
TCAGCTGGTTGGAGTAGCAATTGGAGGTGGTTGATGTCTTAGCTGGAGCG
TTCATATTCACAAATGCAGGCCCATCGATAACTTTCATGTAGAATTGAGG
TGCCTACGTGCCaacatatttcttgagataagTTTCAAAATCGGACTTTG
CAGTGCATTTTCCTCAGTCTGCCATATTCTGAGATGGCAATAGGGTCCCC
ATGATTCTCGTGCAAAAAGAAGTTTTGAAGATCTCCTTTTCGTGACTGGC
AAGCGATAAAGAGGCGAGAAAAAAGTCTTCTGTCTGCAGTTAAGCTTTGA
ATTCTTTCTTTGGATTTAGTCACATAGACAGATTAGACTGCTTGAAAATG
AGGGGCTGAGTTCTTTGGAATCACGTCATAAAGGGACTTCTTCCCTTCTC
ACTTTGGAGTCGATCTTTGATGAAggtctgaaattgatttttaccAGTCT
TCTCGGCCTTCTTTACTTGGTTTGTAGCCTCTGACGGTAGAATGCTGGAG
TATCTTCATGATGTTTCAAATCAGTTTCATCTTCATCCGACGCGATACAA
TCACTTCCGCGCATCTCAGCGATGATGGGGTTGCTGACTGACCATCTAAG
TAGGGCTTTGGGGTTGTCAAGCAAACCAACTGTGCCTCCAAGAATGTTGT
TTTGTTCATGGGCCTGATCTATTCCGATGTTTGAAAACGGTCGGTTACTA
CGTTTGATGGTGAAATATCTCTTTTCGAATTTGCTTCGTGTCGAGTTGTC
aagtttttccaaatcattgATGAAGACTGGAAGCCAACGGGAATAATGCG
CATGATCCATTGAAAACATCCATTGACATATACGTTTCAGAATGTTTAGG
AATGAAGTGTCCGCATCGCGTAGGCTAATCGAATAACAGAACTTGCATAT
CGATTAGGCCAAACCAAAAACGAATGTTAGCATTTTCTGACAAGCAAGAT
GctttccaattttcaaaatcagaagTTGTAGTTTGTTGATCAAATGTCTT
TCTTTTAAGTGCCACCCAAGCAGGCAGCAGGTGATATTTGATGTGCGTAC
CGCGTTCTTTTCACTTTAGGTCCGTATAGGAAACTTTTGATACGACCTGG
TGTGGACACGTTTGCCTTTTTCAGTGCTTCTACCCACCCTGAGCTCTCAA
TCCAGTTGTACCCATGTAGATCATTTCGATGTGCAGAGGACCCATCATCC
AGATGACATCATTGTATCTGTCGTTGTACATTCACTGCACATGCTTCCAC
AATGCGTAAACTGGTCGATCCATCGTGATAATAACCTTTTGACCAGGGAT
TAGAGAGTAAGTGATACTTTGGAAAATTTAGATGCAATGACGAACCATGG
CTGTCGAGTTGATTGATTTGTCTATTCGTGTATTCGAGCGCTGGTCATGT
GGATGTGCTGGATATTGTTGTTCCATAGAAATATGTTGATTTTGGATCAT
TGTCCATGTTGTCGATGTCAGAACACTTATCAGATGAATAATATTGATTT
ATCAGTCTTAAGTTGAATTATAATGGTAAAAGTtatatatcatcaatatc
aaAGTCGCCTATTTTAGATTCAAGATAACTTAGATGAAAACAGTTCTCAA
GTTAAATTGTTGGGCTACCGAAACGTTTGTATAATTATATTGAGATATAA
AAAGCAAAGCGTGGTTTAACGAACAACGAGACGTTGCTTTTACATACACA
AATTAATTCTTAAATGATCGTTTAACAAACGCTAAGGCATCCCAGAATCT
GATACAATTTACCCTCGATAATATTCTgctcttcaattttcattttttta
ttttgattgttaAGGCCATTTAAGCACTTTAAATGGTATTTTGCATCAGC
TGGCATCATGTCTCCTGAGCTGAATTTCACCATCATCGTGTTTAGTCGTC
CAGCTCTTTGttgggggggggttgtacttttacggtgtgacgggattggc
ccttttttagtacggtattacgggatttgacaaaaaaaaagacgggaaaa
aggtattttaaaatcagacggtgacggtttttggccttattttttgtcat
tatgccggtatctgaacctgtacaaaccggtgtgacggtgttattattct
tttcaattttcgggattccgggattcagcaaaaatcttgacgggaaaacg
gtatttcgaacccctacacccccccccttttttcaNttttcgggattccg
ggattcagcaaaaatcttgacgggaaaacggtatttcgaacccctacccc
cccccccttttttcacttcagaactttttctttttacgtTCCTTCTGTTT
ATTGTAGAGACTATTGCATGACTTATGTATGACTGCTTCTTTTGAGATCA
ATTCTTTTGATATTACGAGGCAAACTATCGTTCTCTTCGAACTCTTTCAA
ATTAAGCGATAAAGTAAAGTAAATTTTTCTATTTGTCGAACCCTATCAAA
GCAGAAGAATGTATAAATAGCTATAGGAACgcaattcaaaaacattcaaa
cttaCTGTCCGCCCACCCTTAATCCTTTTTATGTTTAGCATTAAGAAGTT
ACTCCTAACGTTATTTGGCTTGCAGTGCTTAACcctcttataaaaacaaa
tcaatGTGGATCAAAACTAGCACTCGTTATTGCTAAACATCAAAATGTGT
TGAAAATTTACTAACAAAGTAAATAGAGTTTACTGGTGCCTaaacagcaa
aaaaacataCCTATTTTTTACTGGGTTAACCACTTCTtccttttgaactt
tttgacaaATCACACAAAGCTTCCAatcaatagcgctccgcaacgcattc
gtcataattattacttttcacttatttttgacatttgtacgagttgcaat
cccacaattcaatgcggctcaattaaaTACACGTGGaagttgttatatat
cttttgtcaaatgatgcaattaacgtgcaaaagagatcaacgcaaaggtt
gatgggattggaacttgTACAAACACATCTAGAGTGATGATTATATCNTA
TAAATAGCTATAGGAACGCAATTCAAAAGCATTCAAACTACTGTCCGCCC
ATCTAGAGTGATGATTatatcaaaaatctatttttagattcagcgcgctG
CGCTATTTCAGGAACATCCAAATCGACTTTTGGCTCTACTAACTCAAATT
GGCTCATTTTGAGATCTTATACCTTCTGTATTATTTTCTACTATTTCAAA
AAGCTAAATAAATAGCAGAAATAAAAGTTAACGCTAAAGAATTTATACGT
AGCTGCTAGAAAGATTACATTGTAATATTATAATACTTCACGTGTGCGAA
TTGGTTCCTTCCaaacaacaataaaaactttttgaggcaatgcaatgtct
tttaATCTGTTCTGTTCTACAGGAATGCAATGTTTTTCTAACATTTTAGC
AACAAAGCAAGTAAAGATGCATTTAAAAGCATCCTCTTTCGTCTTTAGAC
GTCTATCAGTTTTGTACCCTAAATTTTTGCGATTTCAACCATGTTACAAA
ACACACtcaataacttttattggctttattttcatgaaaaactgtaagca
aaaaagttgttcaagatgaaatttcctttccaacggtatataatacttGG
TGGTTTGTAactataaattttttaaaaatttttgatgacgtcacaagtca
aCTTCAGAGGCTtctaacttttatcgacttcgTTTTCAGCAAAGACTgca
agcaaaaaagttgttcaaaatTGAATTTCCTTTCCAATGGTATATAATAC
TTGATGGTTTGGATACCTTCAGATGATTttcatgacgtcagcaaaaaagt
gctgacgtcagcagtcACGTGGTTTTCAGACGTGtctctgtcaatttttt
tgttcagaatACAATTGTGCATGTCTGTGCcaagtttcatgcttttttca
CAAACTGAAGTATTGTTATGATATTTTGGTCTAACAGACCAAAGACAGTG
TTTTCTTGTCTAatttgataccctgttttttcgtctttttgcgctctttt
tgaaaacaatttttttactctttttgtgataacttttgatctaatgaacc
aattttaaagtttgatataccaaaatttaagttaaaccctcctctaaaca
atttagaaaaaatcaagctaatatattttttcactttttcgtaattttga
atcaaacaaggggaagttttttcagagacacccggtacatttttggaaag
ctaaggagtaggggaatcgaaattacaatgtttccaattttttttcggac
actttggtgtgattttcggacaaatatgacggtctcaggcaaagctcata
gggttaaaaattaatgaaaattttagcttgagaaaacggagacctgttgt
atatttttggaaaagctctcaaaaaattaggattagagatatattgcaag
tataggtgatttcagtacctaactcgagatattgagcttcaaaaagcgca
aaacctggacaaaacagctgtttctggctgaaaaacacggttctcaaggg
ttaatatctcgagttaggtacagaaatcacctatacttacaatatatctc
taatcttatttttttaagagctttccaaaaatatacaacaggtctccgtg
ttctcaccctatgatttttgcctgagaccgtcatatttgtccgaaaatca
caccaaagtgtccaaaaaaagtttgaaaccatcgtaatttcgattcccct
accccttagctttccaaaaatgtataacaagtgcttctaacaaaacaatc
gagggatctcaaaaaatcgaacaaaattcccccccAATAAGTTGGAAGAC
TAGGGAGCTGGAGTATTTCTTTTTGTGGTATTGTTCTCGAGAGGGAGATA
GGAATTTAACTGTGGAAGTTATTCCCCGGGCCATTTTATTTGCTgtcttc
tatttttctttcacctaccactctgaaaaaaaaccaaaattcctgtaaag
agccatgtcaactgagtatcaaaaaaccttgaaaagtgccaaagtttttg
ccaaaaaaaccttgaaaaaccactttaaaatgaccaaaaaaaccttgaaa
atcctgaaaataaatccgtagacaccctgttagagctagcctgtatgctt
gttagcctccactgatgcaaggtCGGTCTTTACTGTAACGAGAAAAAAAC
AGAATATCTTTGCTCCTCTGAAAACTTTCTccctttattttctttgaaag
gtGTTGACATTAAAAAAGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNACAGGGCTCGAGTTAGAAGAACTGAAA
ACAGTTATGTCAGACCGTGAGCTGTGGAGAGAGAGATACTCGGTATTTCC
GACCTAacggtcgaaggatgatgatgacgatgatgcaagttacccccATC
TCACGGTATCTATCAATATAGATTACCTTATAGTATCGATTCTATTGATT
AACCATCAATtaaaatcgatacaaaacatcAATCGATTaacagggttcga
attataaatttaaGGAGCTTCGCTATTTATCGCGCGAAGCGAGGTAAAAA
TAGGAGCGTTGCaggcaattttttttcactgtttgCGAAGCTTTTTTGCG
AtgttgtttggaagaaaatgcgAAAGTATCTTCAATTTATTTCTCTAGAA
GAGGGAAGTGAGACTTGAAGTAAGAGATTATAGACAAAGCAAAGTATAAT
GAAGTTTTGAAATaccgagtagataaagcaatagataaacgaatgaataa
actagcgaagtagcgagttgataaagcaatagataaacgaattaATAAAG
TAGAGAagtggcaagttgataaagcaatagataaacgagtgaataaagta
gcgaagtagcaagtatataaagcaatagattaacaaattaataaaatagc
gaagtagcgagttgataaagcaacaTATTAATGAATTAATAAaatagcga
agtagcgagtttataaagcaacatataaacgagtgaataaaatagcaaag
tagcgagttgataaagcaacaaataaacgaatgaagaaactagcgaagta
gcgagttgataaagcaatagataaacgagtgaataaagaaGCAGAgtggc
gagttgataaagcaacaaataaacgaatgaagaaactagcgaagtagcga
gttgataaagcaatagataaacgagtgaataaagaaGCAGAgtggcgagt
tgataaagcaacaaataaacgaatgaagaaagtagccaagtagcgagtag
ataaatcaatagataaacgagtgaataaagtagtaaaagtagcgagtaga
taaagcaatagctAAACGGTGCATAACTTCATACTGAAGCTCTGATAAAA
GTgatgtttaattcaaaagaTGTCCATCATCTTTTTACAATTAAGGGCCT
AATCTCTTTACAATAGAAGGGCCAAAGTccaccaaaataagtttgttAAG
TTTTAAAGAGGACTAAGTCCAATTAAATTGCAAATGGGCCTAACTCCATG
CATcctaaaaagttttattgagTTTTTCTTTATCTTACTGAGATTGTCTT
TCCTCTTTATCTTGAGTCTACAATCTCcctcaaaatatattgagatttta
gtgtattttaacgtttttcagaatttNCaccctcgaaatatattgagatt
ttagtgtattttaacgtttttcagaatttaaagttcgggcgagaattgct
attttagcacttccactttcttccattgagtatttttattttagaggggt
ttggtggcttctaggctatatattccaagcctcattcgagcaaatttgag
cttttaaatcctgagatcctaagctccaaagtcttaagtctcatgttaaa
actcaagagttaaaactctactttccaactccCCTTTGTCTTAAATATTT
CTTGTAGGATTGTAGGTGTCAGTGGCCTTATTTTGGTGTGTCATATGTGC
AggttttgaacttttaaagacAGAAATTAACCCTCACATGTTTTAAGTCC
ACTCTGGAAGATTTATAAGTTGCACCTAGTACGTACAAAAATATCTACTT
TCCAAAAGAAtgcctttttattgaaaaaaaagttcaagctatggctttca
gaaaacatttacttcaaagctttacaatcaaaaatggttttagaataaag
gaaaaactttaatcgcaattttctcaaaatgaccaaaatggagttaggcc
ccttttgaattaaggcttCACAGGACTTGATTATGGAttttaatcgatat
ctaattcATCTATTAATATCAATTAGCTATCAATTTTATTGATTATGACC
GTCTGGGGTCATGTTCCAACCATCACACCCAGACATACCAATTCAATTTG
CAACACACCTTTCCCCGCAATTCGCAAAACAGATGCGCACACATTATTTT
GATgttctccaccgtttggtctctggaggtaaacaaacctgtttttgcct
gcgttaCCTTAGAGGAAGttgtttttttagcttttcttaaATTCCATCGa
tcaaaatcccctcaaattttagtatgttctttCTATACATGACACCACAC
GGAAaattttttgccacaaaaaaacaacactTCCCTTAACCCCTTTGCAG
GCAAAAACACGTTtatttacctcccaaacaagtttatacacaacggtgga
gcacGCACTTTTTCCAGGAAGTTTGAATTACCAGAAAGTAGGTAAGTACA
GGGGTGTAGGTTGTGGACTTGTGGAAAAGAAACTTTCACCAGAAATATCA
ATTTTACTGAAGTTCATTCATCCATACCAAATCTTACTTTGCCATATTTC
TTTTGATCGTTTCGGCTGtattgaaaaccaaaacaaacgacaACTCTCAA
ATTTTACAGATGGTTGGTTTTTATATATCCAGATGGTGTCAATCAATAGA
ATCGAACCTCACATCaattgaaaacaatcaaaagcaaTTGAATAATTGTG
ATTTATTGTCGAACCCAACAGTATAGCCCTAACTCTTTCACATAAAAGTT
ACAGGAAACACATATATTTGGACTTTTTACCCAATGCTGCatgcaagcac
ttaagctaatGTCTTGCTAAAGCGGgacaaaatcagttttttgaagtttg
caaaaacaTTATGTGAaaagagcagtaaaaaatacaacttttgtaTTTTC
CTTTGTTTATCAAAAGTTCCTGAAATGAAATCTGCCATCTTTGCTAAATT
AGACCACTGTAGACCACAGTTTGGTGCTAGCAATTTGATTGAACAAATTG
CTGCTACCAAACTGTggtctactttcagcaaagTTGGCAGATTATCTTGC
TTCAACTGCCATTGTCCGGGAAATACAGAATAGCTCTATCTATATTTTAT
ACATGACTGGCCGTCCTGGCATTATTCAAGAGGACTCTTTACCATGAAAG
TTAAGTAAACTTCGTTTGCtgccatttttgaattttttttaaatatattt
gtattttcaaaaaacattataTAAAAGATTGTTAAAGATAGCATTTACAC
AAATGTTGCTAGTAAACTGTCAATCGGCTTATTGCTGGCTTTAATTGATG
AATTGTCCGACTGAACAAGAGTGTTACCGGCAAGATGTCGATCATTTTAC
CGGTATCAAGGATTTCCTCTTTTCATTTTGAGTACAAAAGAGTTGTGTAC
TTTACATTACTTTACATTTTATTTgcatttgaaattattgcttgtgatga
caaaaatgtcaaaagtgcaaataagaatagaaaacaattttttgatgtaa
aatgagttttaaatgttttaaatccTTCTTTAAATTTATCACATTTTAGT
TCCATGATGCCTCCAAAGAAGAAAGGGAAGAAACGATGTAAGTAACGAAA
CCAAAGTATGCTCACTGCAGGACATGAATCATCCAATCAGTGAAGTATTC
TGGATTGTTTTGCTTATTTTATAATTCTGCTTTAACAATTTATCTTCCGt
ctgtttttatttcaatttcatttcattgttattatttttttcattttctc
atgTTTTGATTCAACTTAAAGCTTCAACCGAATCAAAAGAAGACCCCGAA
TTGAATTATGAGAGCGCAACTGACTTATTGTCACCTTCTGAAGTTGTCAA
AATGCGTAAGAAGACACAGCCTGCAACATCAGCAACAGCTGAACAATCAC
CTGTCAAAGATATCCCAAAAGATAAGGATAAAGCAATAGTGAAAAAGAGT
AAAACTCAACAGAAGTCTGGCAAAAAGGATAAAGATAAATCAGATCTAGA
GAAGAAGAAGGacaataaaaagaaagaaaagggcGATGGAAAACACTCCG
AACATAGAAAGCTGAAAGGGATGAAAGAAAAACGCAAATCACTGAAAAAG
GTTTTGTTTCGTTTTCCTTaagattcttttttttatgCCGAAACTACTTG
TCATTTGTTTTAGGAACCgaatgaatttaaattttttagtcaaattatgT
AACCAGTAAAGAAAACCCAAGCAGTAATGACTAAGGGTGGAGGCCACTCC
ATAACcataaagtttttgaatttcaatgagaACAATGAAAGCATTGGCCA
ATATCATAACCCAATATCATAACCTAGCACTACTGTATATGATAAAGAGA
CATTTTCACACAATTCATCATATTATGTTTACAGCTTTACTTTATATTAA
AAGCACTTAAGAGTAATCCTCTCTTAAACATTTGATCAAACATAATGCCA
GAATCCTCTATCGCAGTAAAAATTCTTGTTTCCTCACAGTGCTGGGGTTA
TTGGCTGATTTCCCATTCTACTTGTTTCGTTCATAAGTCAAAAATTCAAT
TCTTTCAATTCTATTCATAGCCAAGTCAATCAGGAGAAAATGAAGATATT
GATCTTTCCTCAGTCATTTATCCATGTGGTGTTTGTAACAAAGAGGTTGT
TGACTCTGATGAAGCTATCTTATGTGAAGCAGGCTGTGAATTCTGGTACC
ATACTAAATGTGCTGGTATGACTGATGTTGCTTACTTGCTGTTGACTAAG
GAGGACCATGCTGAATGGGTCTGTGATAAGTGTATAGCATCAAAATCTGT
ACGATTAGTCAAAACGAAAAGTGTCCTTGAGACCTCCCCGTAACACTGAT
ACTTTCTATTCTATTAAAGTttttattaaaatcaatttttaaaataaaat
gcatAATGTAGTCCTTGTCAATATacattttttaggatttttttgtacat
ataGCTCCTATTATTATTTATTTGCtctcaaatttttgtaaaaagatttt
tatataattttaagtTTTACTTCCCTTGCATGTACATGCAATggaatgca
aaatatttttattatctTTAGGGGCAGTTGTTCATTCAGGTAGTCTTTCA
AGCTCCA Coding sequence (CDS) from alignment at scaffold_326:37067..54573+ >TCONS_00059307 ID=TCONS_00059307|Name=TCONS_00059307|organism=Clytia hemisphaerica|type=CDS|length=1908bp|location=Sequence derived from alignment at scaffold_326:37067..54573+ (Clytia hemisphaerica)
ATGATGCCTCCAAAGAAGAAAGGGAAGAAACGATCTTCAACCGAATCAAA
AGAAGACCCCGAATTGAATTATGAGAGCGCAACTGACTTATTGTCACCTT
CTGAAGTTGTCAAAATGCGTAAGAAGACACAGCCTGCAACATCAGCAACA
GCTGAACAATCACCTGTCAAAGATATCCCAAAAGATAAGGATAAAGCAAT
AGTGAAAAAGAGTAAAACTCAACAGAAGTCTGGCAAAAAGGATAAAGATA
AATCAGATCTAGAGAAGAAGAAGGacaataaaaagaaagaaaagggcGAT
GGAAAACACTCCGAACATAGAAAGCTGAAAGGGATGAAAGAAAAACGCAA
ATCACTGAAAAAGCCAAGTCAATCAGGAGAAAATGAAGATATTGATCTTT
CCTCAGTCATTTATCCATGTGGTGTTTGTAACAAAGAGGTTGTTGACTCT
GATGAAGCTATCTTATGTGAAGCAGGCTGTGAATTCTGGTACCATACTAA
ATGTGCTGGTATGACTGATGTTGCTTACTTGCTGTTGACTAAGGAGGACC
ATGCTGAATGGGTCTGTGATAAGTGTATAGCATCAAAATCTGTACGATTA
GTCAAAACGAAAAGTGTCCTTGAGACCTCCCCGTAAATGATGCCTCCAAA
GAAGAAAGGGAAGAAACGATCTTCAACCGAATCAAAAGAAGACCCCGAAT
TGAATTATGAGAGCGCAACTGACTTATTGTCACCTTCTGAAGTTGTCAAA
ATGCGTAAGAAGACACAGCCTGCAACATCAGCAACAGCTGAACAATCACC
TGTCAAAGATATCCCAAAAGATAAGGATAAAGCAATAGTGAAAAAGAGTA
AAACTCAACAGAAGTCTGGCAAAAAGGATAAAGATAAATCAGATCTAGAG
AAGAAGAAGGacaataaaaagaaagaaaagggcGATGGAAAACACTCCGA
ACATAGAAAGCTGAAAGGGATGAAAGAAAAACGCAAATCACTGAAAAAGC
CAAGTCAATCAGGAGAAAATGAAGATATTGATCTTTCCTCAGTCATTTAT
CCATGTGGTGTTTGTAACAAAGAGGTTGTTGACTCTGATGAAGCTATCTT
ATGTGAAGCAGGCTGTGAATTCTGGTACCATACTAAATGTGCTGGTATGA
CTGATGTTGCTTACTTGCTGTTGACTAAGGAGGACCATGCTGAATGGGTC
TGTGATAAGTGTATAGCATCAAAATCTGTACGATTAGTCAAAACGAAAAG
TGTCCTTGAGACCTCCCCGTAAATGATGCCTCCAAAGAAGAAAGGGAAGA
AACGATCTTCAACCGAATCAAAAGAAGACCCCGAATTGAATTATGAGAGC
GCAACTGACTTATTGTCACCTTCTGAAGTTGTCAAAATGCGTAAGAAGAC
ACAGCCTGCAACATCAGCAACAGCTGAACAATCACCTGTCAAAGATATCC
CAAAAGATAAGGATAAAGCAATAGTGAAAAAGAGTAAAACTCAACAGAAG
TCTGGCAAAAAGGATAAAGATAAATCAGATCTAGAGAAGAAGAAGGacaa
taaaaagaaagaaaagggcGATGGAAAACACTCCGAACATAGAAAGCTGA
AAGGGATGAAAGAAAAACGCAAATCACTGAAAAAGCCAAGTCAATCAGGA
GAAAATGAAGATATTGATCTTTCCTCAGTCATTTATCCATGTGGTGTTTG
TAACAAAGAGGTTGTTGACTCTGATGAAGCTATCTTATGTGAAGCAGGCT
GTGAATTCTGGTACCATACTAAATGTGCTGGTATGACTGATGTTGCTTAC
TTGCTGTTGACTAAGGAGGACCATGCTGAATGGGTCTGTGATAAGTGTAT
AGCATCAAAATCTGTACGATTAGTCAAAACGAAAAGTGTCCTTGAGACCT
CCCCGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059307-exon-scaffold_326-1491911889:37067..37136 | TCONS_00059307-exon-scaffold_326-1491911889:37067..37136 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1510915933:37067..37136 | TCONS_00059307-exon-scaffold_326-1510915933:37067..37136 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1575043694:37067..37136 | TCONS_00059307-exon-scaffold_326-1575043694:37067..37136 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1491911889:53016..53053 | TCONS_00059307-exon-scaffold_326-1491911889:53016..53053 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1510915933:53016..53053 | TCONS_00059307-exon-scaffold_326-1510915933:53016..53053 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1575043694:53016..53053 | TCONS_00059307-exon-scaffold_326-1575043694:53016..53053 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1491911889:53238..53566 | TCONS_00059307-exon-scaffold_326-1491911889:53238..53566 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1510915933:53238..53566 | TCONS_00059307-exon-scaffold_326-1510915933:53238..53566 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1575043694:53238..53566 | TCONS_00059307-exon-scaffold_326-1575043694:53238..53566 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1491911889:54037..54573 | TCONS_00059307-exon-scaffold_326-1491911889:54037..54573 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1510915933:54037..54573 | TCONS_00059307-exon-scaffold_326-1510915933:54037..54573 | Clytia hemisphaerica | exon |
| TCONS_00059307-exon-scaffold_326-1575043694:54037..54573 | TCONS_00059307-exon-scaffold_326-1575043694:54037..54573 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_326 | supercontig | scaffold_326:37067..54573 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00059307 vs. Swiss-Prot (Human)
Match: PYGO1 (Pygopus homolog 1 OS=Homo sapiens GN=PYGO1 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.470e-22 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 3
Query: 474 SSVIYPCGVCNKEVVDSDEAILCEAGCEFWYHTKCAGMTDVAYLLLTKEDHAEWVCDKCIASKSVRLVKTKSVLETS 704
S +YPCG+C EV D +AILCEA C+ W+H C GMT+ AY LLT E A W CD C+A K V+L++T+ S
Sbjct: 337 SDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPS 413
The following BLAST results are available for this feature:
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