TCONS_00059312 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059312
Unique NameTCONS_00059312
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1406

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059312 ID=TCONS_00059312|Name=TCONS_00059312|organism=Clytia hemisphaerica|type=transcript|length=1406bp
gcTAGATGCAAGTGAAGATGATGGACGTGGTTTTATTTTCCACAGTGAAG
ACGCGTTAAAATGTGACCGCTTAATGATTATCGTTCATGGTTCTGGTGTG
GTTAGAGCTGGCCAGTGGGCTAGAAGGCTTATTATCAACCATTCATTGGA
GAGTGGGACCCAACTCCCTTACATTAAGAAAGCAATGGAGtTGGGTTATG
GTGTAATTGTACTGAACTCTAACCAACATTACGATGAAGTCAATGACCTA
CCCATCAAGTACAACAGATCGCCAGAGAGCCATTTCAACTACGTATGGAG
GGAAATAGTGTCCAAGTGTAAGGCCGGCGATATTGCGATCGTTGCTCATA
GTTATGGAGGTGAAATCACCGTTGCTGGGGCCACATCAAATCGTGACTTG
ATCGATCGAACGTTTGCCGTCGCATTTACAGATTCGGTTCATTATTCATC
TTCGAATGACcggaaaatcaaaaagtggatgtCGAAACATGTTTGTAACT
GGGTGGGTAGTCAATTGCCCTTGGATGAAAAATTATCTACAAGGAAAGGA
GATTGCGTCAGAAGATCTGCAGGGACTCCGGTACACGAAGAAACTTCATG
GTATGCTTTCGGTTCTGTTTTCAAATTCTTCGAAGAACAATGggaagaaa
gaaaacaaaagaagcaAAACACAAAACCAGCTCCTCCTCAAAAAAAAACA
AAATCTGTAGAAGAAAGTGAGGATGAcgaagaatttgaaattttggaata
tCCATCGAGTGAAGGTGAAAGTGAAAAAGCTAAGAagcagaaaaagaaga
aaactccACCGAGCAAAAGTGGTGAAAATCAAGATCAAAATCAAGAtaac
aaccaatcaaatttacAGGATCAAGATGATATCCAATCAAGTTTGCAGAA
TGAAGATAGCATCCAATCAAATTTGCAGAATCAAGAtgatagccaatcaa
atttgcaCATTCAAGATGACATCAAATCAAATTTACACAATCAAGGTGAC
AACCAATCAAGTTCAATGAATAACGAGGCCAATGATGGCGGCATATTTTA
TGATGCTGAAAAGGGTGAAAGCCAAACAGAACAAACACCGAAAGAGCCTG
AAAATAATGTTGAGGATATGTCTCAAGATGAAGATGAGGTTGCCAACGGT
GATCAGAGAATCGTTGTTCTCAAAGACGATCAAGCTGTTATCGATGACGA
TGGTAGCGAACCAATGTCTCAGGATGGTGTTAAACAACAATCAGAATCTT
CACCAGTTGTTACCAAAGCTGAGCTATAATGAAGGGTTTGATGGTTTTAA
CTAAATTGCAGTATTTGTAAAGATGGTTGTTATATCTTTTTGTCAAAGGC
ACGGATAAGTTTTTGTGGCtgtcattttttaatttgtacAAGTTATGATT
GGGTCG
Run BLAST on NCBI

transcript from alignment at scaffold_326:76544..93293+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059312 ID=TCONS_00059312|Name=TCONS_00059312|organism=Clytia hemisphaerica|type=transcript|length=16750bp|location=Sequence derived from alignment at scaffold_326:76544..93293+ (Clytia hemisphaerica)
gcTAGATGCAAGTGAAGATGATGGACGTGGTTTTATTTTCCACAGTGAAG
ACGCGTTAAAATGTGACCGCTTAATGATTATCGTTCATGGTTCTGGTGTG
GTTAGAGCTGGCCAGTGGGCTAGAAGGTAATTATaatagagaaaaatatt
ttaccgaTTAGGTAGTTGGCTTTCCATATTCCATATTGTAACTCAGTCCT
TAAAATTAGAGCCACTTTGGCTTTTCAGATAGCGACATGATAGCGGTTTT
TCTTTTATCTTATGAATTTTATTTGATCTTTGTTCACTGAGCGAATTATC
TCGTCTTGCGTTAGTAGACCATATTCTTACACACATTTTGGTCTAGCATA
CTAGAGTCGAGTAAATCCAAGAGTAAGTAGATTATGGTAAAGAAAATAAC
TTGAGGATTTATCATATTCTACCATACCTTTGATATTTATCGCATCATAA
AATAACACTTATATACTGTATAACATGTAATAAagacagacattgtgacg
tgctgtggcactcataaggttcggcctCGCGCGAGCATTGCTTGCTCCCC
CAGCAGCCTCCAGTGGCGTTCGAGTGTCATGATATAcaccatggcttggc
agctcgcgtctgtcgagtcgcagtgtctgtcagcgccgtgatttCTACTC
CTTCatgggtaggacccatcccgaatgcattcgtagggctcatatctatc
taACATGTAATAAAAGCTACTCCAGTCTAAAAAGAAAAGCCttcccagct
agcacacaacgttgtttcaacgttcatctaacgttatatggacgttgtga
atattagaaaaacgttgaaacgacgttgtgtgccagctgggttgatTCTT
TATAAGGTCTAGATGATGATGTTTAATTTTATCCAACAGGCTTATTATCA
ACCATTCATTGGAGAGTGGGACCCAACTCCCTTACATTAAGAAAGCAATG
GAGGTACAGTATATGCATTTATATCTTTAAAAGGTTGAGTGTGGATTGAA
GGGGGCTTATCCGAAGAATTCATGCATCCCCTGCTAATGAAGTTGAATTA
TTGTTGAAAGTCGAAAAATTGCTATTGATTTTTAATGGAGTAATTTAAAT
GAGGTTTTTAAAGGTGTAGTAGTGTACTAGGGTCAATTTATGACATGCGA
GGGGAATTGGGTGCCACAATATGATAAAAGTGTGGGAAGGTATGTCAGGC
ATTGTATCTAGGGTGGTATTGTGATCACATGAATTTAAAGAACTCTGTTT
CTTACTGAAATGACCCGTTTTCTTAGTGCATTATCCTGCTTGTCATccaa
attgatgtttgtttaaatatttctttcttttcagtTGGGTTATGGTGTAA
TTGTACTGAACTCTAACCAACATTACGATGAAGTCAATGACCTACCCATC
AAGgtatcaaaacatatttttaagTGACTGCAGTGTGAAAGGTAGAACAT
TCGGTCACGGTGCGCAAGGTCGTAGATTCAATGATCGGgcgatgtcgtgc
tttggctgaaaagtgtgccgatgttaggtaggaaatcctatctAGTTCAC
GTGACAttgcaatagaatttcagcgcttgaccaataagaagtttcgtggg
tttttgaaaacaatagcagcaatattttttgcaatatttactttttttgc
ttggaagaacTTAAAGCACGACATTCGGGCTTTGCAGAAATCTGTGGTCA
AAATACTACCTAATGCCTCTCTGCTAAAACTCAGTAACAGATCAAGAGAG
AAAGTAGAGAAAagcagggagaaagagtggtgccctcccctaTCATTGGT
TatatagctatcgaaagaggagccttcacTTTGAACTGTATTCTCTGAAG
TAAGAAAAATAGATTCAATCCTTTTTCTAGGTTTCTTTTAAATGCCTGAC
AATACTTCAAAGATATTAAGAAGTTCACCTAATTCAGGGTTATTTCCTAA
GGGAAAGAACAAACGAGGCACGGGTTGtcttaaatgaaaaatattatata
tttcatattaaaaataaatcttCATGCTAGGTCGAGTAAATTTTATAATG
ATGCATGTCGAGTATATAAagcaataaattaataaatagtCAATGTTAGT
TTgaatatattaaaaatattaaaaagtaGACTTTATATATTTTAGAAATC
TTTACCATGCAATGGTTAAGGACTCTTATCTTAATTATTGAAGTAAAGCC
ATCGATCATAATTCTGCAATATCAATTTAAACAGGGGCTGTATTTCAACG
GTGCAAATTGCACTTTTGTTTTCactgattaaaaaaaaagcgaGAAGGAA
GTTTCCTTCGTGATATATTTAAAAGATAGCCTGTTAACCTGAGGTGAAAA
TTGTTATAAACTTTTAGGTAATATTTAAAAGGTATAGAATGTTGTTAAAA
TtaagctttttttaattttgggtTTGGTACGATACTTCTTAATTGCATGT
GCAGTGTCTTTTGTATTTCATTCCATTGTTTCCTTGGTTACACCAAGCAT
CAAAGCCGGAAATGCTGGAATACGGAGGAATAGCTTTACATTTGCCAGAG
ACTTTGGGTGGTAAGCGGGTGGTGGTTGTTGCGGTAGATCTGGTGGTCGA
TTTGGGTGGTTGAGTTGTGCGGGGTGGTGGAGAGCCACAAGCATTTTTAT
TGGTGCAAGCGTAAGCCACATTTCCACCAAGAGCCGCTACTTTAGCTGCA
TTCATCAAAGGATATTTGCCTTGCCCACAAAATTTGCCACTGAAATCATC
AAGATCCAAAGCCCAGAACATGTATCCTTTGAGGTTATGTTTCTTCATCA
CATTCTGAATTTTGTAAACAATACTTTGTTGATCATCATATCCTACCCAT
TGATCACCAGAGCTTCCATAAGGTGCTTTGACTGGACTGCTCTCTGTACA
AACATGGTTCTGGAAATTCATCTTGCAAATTTCATAATATGCCAAGAATC
CTTTTTCACGAGTGTGTGGTCCTGTACTTCCACTGGTGGCAGGTGTTCCA
GGGTTTATTTGACAATTATTCTTCAATGTGAAGCTACGACCGTAGGAAGC
AAGACCAAGGACCAATTTATCTGGAGATGCACCTTGGTCAAGCCATTGTT
TAACAGTGTAATGGATATTCTCTGGTCTTGCGTTCTCATCAGTGTTGGTA
TGATGTCCAAGTCTGTTATCCCAAGAACCATATAAATCATATGTCATCAG
GTTGATGAAATCTAAAGATCGTGATATTTCAGCAACTTCGTAGTTGTTAT
ACACAGCGTTAGCAGCTGCTTTGACGGCGGCAGTGACCAACAAACCTTCT
CGGTGATAAGCATCAGCAAGCTCTTTACAAAGTGAACTGAATCGTTGACG
ATCTCCAGCTGGTGATCCTCTAGCTGCTGGAAATTCCCAATCAATGTCCA
AACCATCGAATCCTAAACGAAAGAAGATTGGGTGATTTTAGCTTAGAAAT
GTTAAAAGCAAGGATTGCGCCTTTCTTTAGAGTTCTTATGGAGGGAAAAA
TGGTTTTTATAATAACCTTTTAAAAAGTATAAGCTTTTTCTCAGATGTAT
AAATATATGTGAAAGCAGGTGATCAGCTGTTTTATATTATCAAGAAAATT
ACTGCTGAGATTAAATTCTAGATTGCCTTTATTTGTTGTATGCTATATTG
GCAGAAATTACAAATTCGNcctaaattgtgacggagcctgatttccgaag
aaaaaaatttcggccaaaaatgccgataatatgccgtcaaaaccggtttg
ttgccattttcttgagatttcatTAATCGTATATCCCGATTTTTGCATCT
TTATGTGTATCAGCAATCCGTAAGTGTGGCCGattcggatttttgagaat
catgtttttccggccgaaaatgtcggaagtatgccggaaattgcctgatt
tgcagatttgaattggactttttccatatatttctttattttttcactta
aaaaaattattgataacaatgccaccatcaagcatgattcaattgtcaat
aaaactttagCAATTTtccaaccggaactttctatttcttttttcccaaa
ACCCTCCCCGGgttcaatcaatgatgaaatttaatgcattttcgctaacc
gctatattttcttaatgattgtttttctccttattgctatataagtttca
tcatcaggtaggtccattcagcatgttgcttgtttaaatCTTGCATTTCT
TTGTAAAGTGCTGATTGATCATTCCATTCATAAGGTGCGATTGTGTATCC
ATTGCCAGACGAAACGACTTTGCCGAACGAGAAAATCAAGTGTGTACATA
GTCCATCTTGGTAATCTCTTGATAATTCATATTTGGCAAGTCCAGATCGA
TATTGAGACCAGTTGGTGTAGTAGCATACACGAACATATGCTTGAGTTGC
CATTACAAATGCAAAGAGAAGTGAGATTTTGAGTATGGTCgtcattttgg
ttggttgacGATATTTTTCTTGCTTTGGTGCTTTGTTGCCGAGAGTCTTT
CCAAAAGCTTTAGTAAAGCTTAAGATATGTTTTTGCTTTACAACAAATCC
TACCGTATactaatgaatttaaaaaagatgcTTGTTGTTGCTTCTTGCTG
CTGCTTGAAGATGCTTTCTGATCAATTCGGCAAAGCTTATCCTTTTTATA
CTATTTAGTGATCTAACTATATGACTGTTCGGTCCAAACGGAATGTTGCG
AAATCCTTTTGATGCTTTACAATTTCATTACGTTTATCCGTTGATATCGG
AATGAAAAGTTTGTCTGGACCTTTGGAAATTTTCCTCCTCAGGGGTGACG
TAGATTTATTGTGATTTTAAAACGTCAGTTTATGATATGTATCTATAAGA
ACATTCCAAGGAAAACTTTTCCTATGTTGAAAGCTACATTATTTTTcgaa
tgaatgaaaaaagtcaCCTAAgcgtataaaaaaaatattattttcgccaa
aaagaTAATCCATCAAGgcatttatttttgaaaaaataaaaattctattg
taaacaAAGGGAAATATTTATAAGATGTTAAcatttcttatagaaaaatg
tttcaaggTTTAAAATGTCAGGGTCTTTTGCTCAAGCTAATTAAGTAATC
GCTTGATGGTAATTGTTCGCTTGGCAAATTATTCCTTAATTACAATTACT
GCCAAATAAGAACGGTTGAGTAATTACGTCATAAAAGGACGCGTCTTTGT
GGCAAGGAAAAGTGTTTTGAAAGTCTTCTTCTGTTATGAGGGTTAAAAGT
TTGCAACTTGGCAAACTTAAACTTGAACTTCATTCGCTTTCATTTTATCA
ACTAAAAGATTAAGATTCAGCTAAGATATATGAACAGGGTGTCAACGgaa
tgaaaccattgaaacctcGGGAAATGAACATAATCTTTAAGAATTTTTAA
ATGTcttgaaaaaagtattttttgatACAATAACCTTGTTTGGTAACATT
TGTGTTTTGGTTTTAACTGATTTCTTTGTCTGTTCTGCagttttaaaact
ttctaaACACTTTTCTTTCTGACTTTTTCGCTGAACACCACTGACACTTT
AAGATTTTGAAGTACCACTATTTAAATTAAGTCGAGCCCGATCAACCTTG
AAtcacaaaacctttaaatgatATGCATTTTTTATGCAGTTNACCACTAT
TTAAATTAAGTCGAGCCCGATCAACCTTGAAtcacaaaacctttaaatga
tATGTATTTTTTATGCAGTTTTAAGTTCTTCCGTCGAAGTAGATAAAGGG
GCTTTTCCGTCTTAAAATTCTGCCtaatcatcaaaatttcaacaatatgT
GCTAGTTTGCTATTTAAAATCCATTCtccgtctcagacgaaaatCCTTGC
TTTGATAACTGTACATAGTGTTGTTCTTCTTATTTTAGTACAACAGATCG
CCAGAGAGCCATTTCAACTACGTATGGAGGGAAATAGTGTCCAAGTGTAA
GGCCGGCGATATTGCGATCGTTGCTCATAGTTATGGAGGTGAAATCACCG
TTGCTGGGGTACGTCACTTATTGTAGGCAACTTATTTAATTCATGTGGAA
AAAAGTTGTTTTCACTGATTTGTGGCAGTTTCTTTCCACGAAAAAcgctt
ttaattttttctttttgttcgcTCGTCATAAAATGAAATCAGGATTTCAA
AACGTACTTTACTGGTATATACATCAAGAGGAATCAAACCTCTTGAAATA
AATCAATGATACCTacgtaatactttaatggaatgAACTTTCACGGGAAT
TAAATTTctcggttgagctcatccgcgaaattgtaaaatttactttttac
acgtcatttttaaacaaaaagaaagaactaCTTTCTCCCTTCTTGTGCCA
TGCGAGCACAATTTTTGAGAGTTTCTTAGTTTCTTCCGCTTTAACAACAT
AGAGGTACGCCTTATTTCTTTATCAtgatatcatattttcaaatttcctt
caATCCAGGCCACATCAAATCGTGACTTGATCGATCGAACGTTTGCCGTC
GCATTTACAGATTCGGTTCATTATTCATCTTCGAATGACcggaaaatcaa
aaagtggatgtCGAAAGTTTGTGCTATATTTTCTAAAGATAATGGTCGAG
CGAATCTACACGCAATCCAGTTTATAGGGGTCTGGGAAATCGGAAATCTT
ATATAGGCAGTTTTACTGTATTTTAAGGGTCTTGAATTTTTAGGGACCAA
GATACGCAAACAATATTTGCAGCTCATATTCACTAATgactttgtaaaaa
aacttgtagtcgaaatttactaattttagaGCGCTTTTACATACCCTGCT
AAAATAGCGAATGTAAATCCACAAAGGAAGCAGGGAAAATTTGGTATCCT
GAAATATACCTAACAAGCTACACATTTCATAAACTTTAGTGTCACCTCTT
TAGTCTCAGAATATTGTCAACATAGTTTGATAAATCTGTTTTTTAGGTTG
CCTAATGACTTTTTAACTTATTTTCCCGAGTAATTTTTTTCCTTACTTGA
AGTAATATAAACTTGCTTGGACCTGTCCTATATACCAATCAAGAGGacta
aaatgaaataattcaTTCCTTTTTCAGCATGTTTGTAACTGGGTGGGTAG
TCAATTGCCCTTGGATGAAAAATTATCTACAAGGAAAGGAGATTGCGTCA
GAAGATCTGCAGGTTAGATGATTAGTAATGCTCTTTTTATGCCATTATTC
TTAATTGGGGAAGTATCTTAACCCTTTCCCGTGCCGATGTCGGCAAATAT
CGACATGGGCACTTTCGTttggacttttccagaaatagtccgtgcacccc
ctgttgaggatattggatatccagggggttaacgatttttgttcaaaagt
ggatagtcagggggttaaatatctacaagggagtggatatccagggggta
aagtgtcttttcaagtaaaaaatacgatgtccaggggtaagcatctttat
aagagaggatatccagggagttAAGCATATCGTTAAGAGTGGATTTCCAG
GGCGTctttactaaagtctattcacgataagtgtgcactcttttttcatt
tacctataacttttgaaggaattcttcaatttttataaatttggtatcat
tggaaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaattataaaaatgaag
atgaaaataaagaagaaaaaaatgaagatcttgtagaaaggtgatatgac
tttcattttcactgaagtggctccttgattatcgaacgacatcactgtga
aaaaatttctcaaaaataatcattcagtcaaaagatatcaagcaaattta
taagctgattgacgtctaaaaacggtgttttctgctgttttttgctgttt
tttggggtcaatcacttatcaactttgtatcataactttttaANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNtatctctccaacgataccaaatttata
aagattgaagaattccttcaaaagttataggtgaaagaaaaaagagtgca
cacttatcgtgaacagactttaatatagtaggatatccagggggttcgat
acttcgaaaaatcaatatcctcaacagtgggggtaaaatctttttctgtA
AAAGCCCATTGCTTTGCCGATGACAGCAAATACCGAAAtggctaaatttt
ttttctgcggCAAATAGGTGGAACCTTAGAAAAACCGAACCGCTGTTAAA
GGATTAACGGGGATTCTTGTCTTTTGGCTAATAACatcggaaggcttcaa
aagttttagatgtttttataaagaagttgtatttttctttcacaGGGACT
CCGGTACACGAAGAAACTTCATGGTATGCTTTCGGTTCTGTTTTCAAATT
CTTCGAAGAACAATGggaagaaagaaaacaaaagaagcaAAACACAAAAC
CAGCTCCTCCTCAAAAAGTAAGTCATTTGACGGTCTTACTTTCAGGTAAA
AATAGAGAGAGATTATATGGAATAAGTGAGGTGGGTGGAAAATGCAGGGA
TGTTTGTTGGTTTGGATTGGAACGCTTTTGGTTGAACGTCTTTGAAAAGA
GAGAAATGCGAAAAGAATATTAGGCAGAAATGAACTTTGAAATGGATTCA
TGCAAAAATTATCAGATTGCGTTTTACAATTATTgttgcacgttttttta
atataagaataaactatataaaaaaGGCTTAAGAACAAAATTATAAGATT
ATCTTCAGGCTTTACGCCCTCTAAAActtccaatttcttaggaaattgca
tgaaaaagctcacaaaatggtaaaaataagaataggATATAGGAAAAATT
TCAGTTTTAAAACTCAAGtcaagaagttaagaacatcaagtcttcaaaat
tttcgtattattcttataaaaacgtgtaatgcTTGTAACAGTTATCATAT
ATTATAGGTgtaattgggctcttccagaattTGTCGGTGCATGTGGGTGG
AAGATATAGTCTGGGgggtgaaaaatctacaaaatttaccctgtccgggg
ggtaaacttgctctgctTGGGGCTAATTTTGCTcggtttgaagttttttt
ttagtgtccggggggtcaactgatgcttgtccggggagTCAGACCTGGTG
TCCGGGAGGTCAAAATTCACCAGGTCTGGGgagtaaatttctaaaaaatg
ttatatcctcctccccccatattcaattttttctctggaaaagcTCATTG
TgctgtttcacttttttctagAAAACAAAATCTGTAGAAGAAAGTGAGGA
TGAcgaagaatttgaaattttggaatatCCATCGAGTGAAGGTGAAAGTG
AAAAAGCTAAGAagcagaaaaagaagaaaactccACCGAGCAAAAGTGGT
GAAAATCAAGATCAAAATCAAGAtaacaaccaatcaaatttacAGGATCA
AGATGATATCCAATCAAGTTTGCAGAATGAAGATAGCATCCAATCAAATT
TGCAGAATCAAGAtgatagccaatcaaatttgcaCATTCAAGATGACATC
AAATCAAATTTACACAATCAAGGTGACAACCAATCAAGTTCAATGAATAA
CGAGGCCAATGATGGCGGCATATTTTATGATGCTGAAAAGGGTGAAAGCC
AAACAGAACAAACACCGAAAGAGCCTGAAAATAATGTATGTTTTATTTGG
CTTTATATCGCTTTATATTGGCTTGCATATTTATTCTATTTGTTTGCTTC
AAGACTCGAGAGGTGTAATTATGAGGTTAAGGTTTTACGGGGGGGGGGAA
CATGAGAGAGAACTTTTGGCAGACATTTTGAAGTaaggtggaaaattatc
ctttcCAGCGGCACATCCCTTACCCAAACACATCTGGTCTAAAGTCCGGT
CTCCaacttttggcttcaatcctttttgcttggaaaaaagattacgtcat
gaaaatGTAGCgctctcgaaaaaaaagttgactatatttcaactttttaa
ccattacgtcagatcgcgccaatggaattggttcatttttcttttgacta
atagcgtggaagctttgctcgagcTCGAGAAAGTGCGATCGCGGCGTGCC
CAAGTGGATTCCGGCCTTAAGGCAATCCAACATGTATAATGCTCATTTTA
aaatagactagcaaactagtctgttgaTTAATCATGTCCGAGAgtgggaa
cataaaggcggcgggcgtttgctagaataggagctgcatAGGAGAActag
caaaagttggtgagaggctgttGATTAACAGACTAGAACATTCTGTCACT
TTGGAGGCTTTGAGAACGGAGGAgtgctttcctaaattttggagggAGAG
AAGCCGACAGACCAATTTGctttgaatttcgtgccaaaagATAGGCAACT
TTgcaagttttgaaatttttgcatctttgtttttgttatttacaTATTCT
TAGATAGGTAAAGTATTTGCAATTTAGCTTCAGCTTTCTACAATTATCCA
AAGTGTACGAGGATTATTCAGTTTTTCCTATGCAGGTTGGTGGTATATGT
TGTGCTTTTGGGGCTTTTTGCTACCCACTTTCAGTCAAGGTaagaaatat
ttctattttggtCCCACCTAAagactttttgttgttttattttagtaCTT
ACAGACTACTTATAAAGTTATATTAAGAAACTTGATTACTCTCCAAGTCT
AATCTCTAATTGTGAACCTCTCCAACACCCTTTTTATGAAAACAACAGTA
ACGCTAACCAGGCAACTCTGCTAAAAAAAGTACCTAGCAATATAACATAT
TTGAGAAATGTTGACactattttttgaataataacATAGCATAATAATCA
ACAATTCTCTCACTCTCAATATTGCATGTGTTGAAGAAAACTTTTGGTAC
AGTTTACAAACCTGTTTTAGGTTATCATCAGAAACAGCGTTTCCTGGTCA
GTTTGAAGAAACTCAAAAGATTCTCCCTCTCATCACTCTCAATGCCATTA
CCGCCAGGCTGCTGTCTGACAGCCCCACCCTCTTCAACATACTCACTGCT
ACAAAAGACAACCTGTCCTGACTGTTTTAGCCTGTAATGTACCAGCAAAT
CACAGGAAAATTAACATACGGGTGGATTAATTTTTCTTGTCATTGTTTTG
AACATACATTTTGTGTATACTTCGACAGTATACTTTttacttgttcgaca
atattagttacacggtcttgGCAAGCCTCGTCACCAATACagtttttact
gaccctgtatatcccgtatcccatcTCGAGACGATCGTGCAACGGATTTA
TCCTGCAGAAGTTCTTATTAGACATTTTCATTCAATCAGGATTCGCATtc
gattagttttttttttaagtgataGGTCGAAATGCAGTAACGAACTTTCG
ATATGACAAgttctaaaattgaaaaaggaaaaaggaaaaaaattagcTAA
AAAGATTGCAATAGTTTTTAGAAAGTTACTGAGTATAACAGTGTAAAATT
ATGGTATATTATTAACTTTTGCactgataatttttgaaaaaagaataaat
taaaTATAAACAACATTTCATTCAACATAATACTAGTAAACAATTGATAA
TCAACCGATCCATAGTAAGTTAATTTTTAAGCAATTGTCTTGTATTGCAT
GACAAAATTAAAAAGCATTCATAAGTATTTTTTAACGTACAGTACAAAGC
AGACAGCTTAAGTCGATCAGAAAGACCATAAAAACAACAATGCCTCagtc
aaacatcaaaattcaaattaatttaattcaaaaaataaattcaaactaTT
TCAATTTAGCATCCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTTGATTATGTCGATCTTTCTTTCTATTGGTGGAGT
CTGAAGGTATCTATTTAAAGAATGTCTATAGTTTTCCATGCTTGCAGCTT
TATATTTTTCTCCACTGGTCCTTCGAGTGTTGATATAAAAGTGGACCAAA
ATATCGTTCAATTGCTTATCTGTCATATTCTCGAACCTTTCGTCCATATT
TTTCTCCATTAAATAATCTTNGCTTTATATTTTTCTCCATTGGTTCTTCG
AGTGTTGATATAAAAGTGGACCAAAATATCGTTCAATTGCTTATCTGTCA
TATTCTCGAACCTTTCGTCCATATTTTTCTCCATTGAATAATCTCGCAGT
TGTTTGGCAGCTTTCTTATTTGATTTAAGAGTGTTTTTAGCATTGATGTT
GgtctttttttctgtgatttcaGCTTCAGTAGCACATCCAAATCTGCTTG
CCATTTTGTTGCTTCTACTGTATCTTGCTTCCAAAAATTCAAAGATATTC
TGAGACttcatttgttttgtttttattatttccaGGTAACCAACGAAGAC
ATTCAATTGcgaatcgaatgtttttattgatttcagTGCTGCGATTGGCG
TATGGAAGCTAtggaatgtcttcattttttttcgagAACATTAAAAGTTT
gagatcaaaataaaacattcgaatcttgaacaaaacattcgaaagcgcat
tcgccaatatgcaatgtcttcttttttttctcaatcgaatgCAAGGAAGA
CAGATACGGTAtatatcccacctccacgtgatgtcttttgaccaatgaaa
tcgcTAGAAACTTACTGATACGGGATAAGTAtacttgttcgacaatatac
TTTTTACTTGTTCGACAACATACTTTttacttgttcgacagtatacttgt
tcgacaatatacTTTTTACTTGTTCGACAACATACTTTTTACTTGTTCGA
CAAGTATACTTGTTCGACGGTATACTTGTTGGACAGTAtacttgttcgac
aatataATTGTTACTTTTTCGACAAGTAtacttgttcgacaatatacttt
ttacttgttcgacaatatactttttacttgttcgacagtatacttgGTCG
ACAATATACTTTTTACTCGTTCGACAAGTAtacttgttcgacaatatact
ttttacttgttcgacagtatacttggtcgacaatatactttttacttttt
cgaCAAGTATACTTGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGACAGTATACTTG
GTCGACAatatactttttactttttcgaCAAGTAtacttgttcgacaata
tactttttacttgttcgacagtatacttgGTCGACATTATACTTTttact
tgttcgacagtatacttgttcgacaatatactttttacttgttcgacagt
atacttgGTCGACAATATACTTTTTACTCGTTCGACAGTATACTTGCTCG
ACAATATACTTTTTACTTGTTCGACAACTATTTGTTCGACAATATACTTT
TTACTTGTTCGACGGTACATGTGTTctacaaatctttaaaaatgtcGAAC
AAGTGATCGCATCGTTGTTCAACAGACTAGTTGTTTGACAGTTATTAGTT
CAACATCCATTTGTTCGACTGCATGGTTGTTCgacacccacttgttcgac
actctTTTGTCGAACAAGTTTAGATTGTTGAACAAGTGGATTGTCGATCA
ACTGGGTTGTCTATCATTTTGTCACCCATTTGTTTAACAACCCACTTGTT
CAACAATTTGACAAATTGTCGAACAAATGGTTGTCGAATATGTGATATAT
CACCAtaacttttggaaaaaaatactaGAATTGTATAAGCATGATGAAAA
AAGCTTTCATTCATTTCGACAAGGCCGAAATTTGAGCCTGTGAGATTGGG
GCTTCAGCTTAGCGTTTTTTTCCTTTCTGGCGTTTAGCTCAAGTCaggct
ttcagcccttgccgccgacaaaatttcttcctacgctcacctaactccta
cgctcacttttcccgcgtgataccgttccagcccgactagCGTGCCAGTC
TAATTTTAAAACAGCCATCTTAGAAAgggatttttgttttttttgtttgg
attaGTAGGgtaaatttcaagaaaacatcaaggggaatagaccttatcgt
agtttttgatttttaaaaatgcgatgcattgtgggattgtttcgagtgta
ttacaatagaaatctcttaggaattcctcgagggaattctattgtaatac
actcgaaacaatcccacaatgcatcgctttttaagaaaaataaaaaactc
cgataaggtctattggatTTCATCGAATATGGAGAGCATGAGAGTTTCTT
TTAGACAGTTGTTTTCGATATACGTTGGAAAAATGGAGTGTATCGAATTT
AAGAAAGTCGAATTAGAGATATCATGAActatttctttttctatttcaaa
aGGTTGAGGATATGTCTCAAGATGAAGATGAGGTTGCCAACGGTGATCAG
AGAATCGTTGTTCTCAAAGACGATCAAGCTGTTATCGATGACGATGGTAG
CGAACCAATGTCTCAGGATGGTGTTAAACAACAATCAGAATCTTCACCAG
TTGTTACCAAAGCTGAGCTATAATGAAGGGTTTGATGGTTTTAACTAAAT
TGCAGTATTTGTAAAGATGGTTGTTATATCTTTTTGTCAAAGGCACGGAT
AAGTTTTTGTGGCtgtcattttttaatttgtacAAGTTATGATTGGGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037354XLOC_037354Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059312-exon-scaffold_326-1491911889:76544..76669TCONS_00059312-exon-scaffold_326-1491911889:76544..76669Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:76544..76669TCONS_00059312-exon-scaffold_326-1510915933:76544..76669Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:76544..76669TCONS_00059312-exon-scaffold_326-1575043694:76544..76669Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1491911889:77433..77496TCONS_00059312-exon-scaffold_326-1491911889:77433..77496Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:77433..77496TCONS_00059312-exon-scaffold_326-1510915933:77433..77496Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:77433..77496TCONS_00059312-exon-scaffold_326-1575043694:77433..77496Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1491911889:77878..77946TCONS_00059312-exon-scaffold_326-1491911889:77878..77946Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:77878..77946TCONS_00059312-exon-scaffold_326-1510915933:77878..77946Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:77878..77946TCONS_00059312-exon-scaffold_326-1575043694:77878..77946Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1491911889:82432..82551TCONS_00059312-exon-scaffold_326-1491911889:82432..82551Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:82432..82551TCONS_00059312-exon-scaffold_326-1510915933:82432..82551Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:82432..82551TCONS_00059312-exon-scaffold_326-1575043694:82432..82551Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1491911889:83002..83109TCONS_00059312-exon-scaffold_326-1491911889:83002..83109Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:83002..83109TCONS_00059312-exon-scaffold_326-1510915933:83002..83109Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:83002..83109TCONS_00059312-exon-scaffold_326-1575043694:83002..83109Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1491911889:83621..83705TCONS_00059312-exon-scaffold_326-1491911889:83621..83705Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:83621..83705TCONS_00059312-exon-scaffold_326-1510915933:83621..83705Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:83621..83705TCONS_00059312-exon-scaffold_326-1575043694:83621..83705Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1491911889:85289..85410TCONS_00059312-exon-scaffold_326-1491911889:85289..85410Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:85289..85410TCONS_00059312-exon-scaffold_326-1510915933:85289..85410Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:85289..85410TCONS_00059312-exon-scaffold_326-1575043694:85289..85410Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1491911889:86215..86628TCONS_00059312-exon-scaffold_326-1491911889:86215..86628Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:86215..86628TCONS_00059312-exon-scaffold_326-1510915933:86215..86628Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:86215..86628TCONS_00059312-exon-scaffold_326-1575043694:86215..86628Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1491911889:92996..93293TCONS_00059312-exon-scaffold_326-1491911889:92996..93293Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1510915933:92996..93293TCONS_00059312-exon-scaffold_326-1510915933:92996..93293Clytia hemisphaericaexon
TCONS_00059312-exon-scaffold_326-1575043694:92996..93293TCONS_00059312-exon-scaffold_326-1575043694:92996..93293Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_326supercontigscaffold_326:76544..93293 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.54921	7.51467	4.4633	4.31684	20.4885	15.1918	25.1234	26.1457	30.478	24.311	18.2878	24.2737	22.2191	21.3033	25.1518	29.0752	35.2952	33.7377	20.7147	23.9994	23.2317	24.3268	17.6322	18.1358	33.5126	29.5439	17.2394	12.6215	11.9416	12.3677
Blast
[Close]
BLAST of TCONS_00059312 vs. Swiss-Prot (Human)
Match: F172A (Protein FAM172A OS=Homo sapiens GN=FAM172A PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.058e-52
Identity = 105/260 (40.38%), Postives = 139/260 (53.46%), Query Frame = 2 
Query:    2 LDASEDDGRGFIFHSEDALK-CDRLMIIVHGSGVVRAGQWARRLIINHSLESGTQLPYIKKAMELGYGVIVLNSNQHYDEVN--------------------------------------------------DLPIKYNRSPESHFNYVWREIVSKCKAGDIAIVAHSYGGEITVAGATSNR-DLIDRTFAVAFTDSVH--YSSSNDRKIKKWMSKHVCNWVGSQLPLDEKLSTRKGDCVRRSAGTPVHEETSWYAFGSV 619
            +DA+E + + FIF SEDAL    +LM+++HGSGVVRAGQWARRLIIN  L+SGTQ+P+IK+A+  GYGVIVLN N++Y EV                                                    L I+ N SPE H  YVW   +++  A ++  VAHSYGG   V        D+ ++  AVA TDSVH  +     + I++WM ++ CNWV S  PLD  + +   DC R SAGT  HE TSW +F S+
Sbjct:  126 VDATESEPKSFIFMSEDALTNPQKLMVLIHGSGVVRAGQWARRLIINEDLDSGTQIPFIKRAVAEGYGVIVLNPNENYIEVEKPKIHVQSSSDSSDEPAEKRERKDKVSKETKKRRDFYEKYRNPQREKEMMQLYIRENGSPEEHAIYVWDHFIAQAAAENVFFVAHSYGGLAFVELMIQREADVKNKVTAVALTDSVHNVWHQEAGKTIREWMRENCCNWVSSSEPLDTSVESMLPDCPRVSAGTDRHELTSWKSFPSI 385
The following BLAST results are available for this feature:
BLAST of TCONS_00059312 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F172A6.058e-5240.38Protein FAM172A OS=Homo sapiens GN=FAM172A PE=2 SV... [more]
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