TCONS_00059354 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059354
Unique NameTCONS_00059354
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1104

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059354 ID=TCONS_00059354|Name=TCONS_00059354|organism=Clytia hemisphaerica|type=transcript|length=1104bp
tttgtagacatagaatttttttttcatagcagttatttgaaGGGTCGGat
aattaggcagggctgtcgaaTTCAGGACCACTCACGcTGAAACTTCTAGC
TCTTTTTTGCCTTATTGGCGTTTGCGTTGCTTATACCATCGAGAAAAACC
CTCAAGTTACAGATAATGAATGGCATGTATGGAGATTAACACATAAGAAA
GTTTACAAAGATTTGGACGAAAAAAGAGTTCGTTATGCTATTTGGAAAGA
TAATGTTCAATACATCACTGAGTTCAATGCTCAAAACAGAcacatgaaat
tgaaaatcaacCATTTCGGAGATTACACCAACCTTGAGTTCAGATACTTG
ACAAACGGTCTCAGTCTAGAAAACAGAACATCCAAAGCAACTTCCTTCTT
GCAGCAAGGTGATGATGGACTCCCTGATAGTGTTGATTGGCGAAGTAAAG
GTTACGTGACTCCTGTTAAAAATCAAGGAGTGATGGGGAAATGTTGGGCC
TTCTCTGTGACAGGTGCATTCGAAGGTCAACTATTCAAGAAAACAGGAAA
ATTGGTCAGTTTGAGTGAGCAAAATTTGGCAGACTGTGTGAAGGGGTTTG
GGTCGATTGATAATGGATATAATTACGTTATGGAGAACGGAGGTTTAGAT
ACAGCAGAGGGATACCCTGGTCCTGGCaagGTTGGAGAATGCAGATATAA
TCCTAATGCGATCGGTGTCACGTGTACTGGTTGGGCGGATCTTTTGAAGG
GCGATGAGAGCGCCCTCCAAAAAGCAGTGGCGTTAATCGGCCCTATTGCG
GTCGGCTTTGATGCCAGTCACAGGTCCTTCCAGTTCTATTCAAGTGGTGT
TTACAGTGAACCTGATTGTTCAACAAGTCAGATCGATCACACAGCTCTGG
TGGTTGGATATGGAGCAGAGGATGGAGTGGATTATTGGATTGTCAAAAAC
AGTTGGGGAACAAACTGGGGAGAGAAAGGTTATGTCAAAATGCGAAGAAA
CTTCAACAACATGTGTGGAATTGCAACTATGGCTAGCTACCCGTATGTTG
AAAGATGAAATGAACTCACAATACTTCTTTGACTATATATATGCTTGTTA
GTAC
Run BLAST on NCBI

transcript from alignment at scaffold_326:267931..283118-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059354 ID=TCONS_00059354|Name=TCONS_00059354|organism=Clytia hemisphaerica|type=transcript|length=15188bp|location=Sequence derived from alignment at scaffold_326:267931..283118- (Clytia hemisphaerica)
TTTGTAGACATAGAATTTTTTTTTCATAGCAGTTATTTGAAGGGTCGGAT
AATTAGGCAGGGCTGTCGAATTCAGGACCACTCACGGTCAGTCACGGTGG
GTGTTTTTTAAAGTTGCACTTTATAAGAAGTTGTGTGATCTGCAACCTGT
AGTCTGCTAATTAAGGATAAATATTTTCTTTTTAAACCACTGTAAATGGA
CTCCCTAAGCACATTTGAAGATTAGTTTTCTTGGATTTTAAGAACAAAGG
ATCAGGATTTTCGTATGTGTCATTTAGAATGGCCTCAGGATTTTCAAATG
GACTTTGTGGATGATCTGATAGCAAAATGTCTGGAAAAGACCTGAAAAGT
ACCCTCTAGAATGTGCATTGTTTTTCATATTGTATTGGAATATCAGTACA
CAATAATATTTTTATTTATCCGTGTTCTATGATTACTTAGGACTATTCTA
ATGAAAATCCCATGTGGGATCACCTCTTGATAGAGGAAAGCTATCCTAAA
CAAAAACATCTTTGTTCTTTTTTTCACTTGCTGCCTACCATCTTGAATTT
TGTTGTTCTGTTGAATGCGGAAATTGTGCCTTATGTATTTCCATTTTTTG
CTTGCTGCAAACACCCACTTGATCTTATCCAAATATTACTCTGAGCTCAT
CTTATTATTATAGCCTTGTCAAATCTCTTGCCTTTACTCACTGTCTTGGG
GAATACTGAGCACACCCCTTAACACACAGCGTACTTATTCTTTTTATCTT
TATCTAAACAAAATTTAAAATTTTACAAATGTTATCAGCACTTAGTGGCC
GCATCTTTATGATTAGCTAGGCTATAAGGCGGTCTCTTTCCTTTCTATTT
TGTAGATAGTATTATATAGTCTCAGGTATTATCAGTGTTCAAATGGTAAA
TAAATAGTTACTTATACTTATATACTTATACTTAGATCCCATAATTTTTA
ATGAAGAGTTAAGTCTATACTGCTCGGCAGTAAGGCTACTTTATTCAAAA
AACCGTTAATTTTTGTTCAAAAGAGAAAAACTTTGACTGGTTGGTATACG
TATAGCCTGTGATTTTACGTGTGATTTTTATTAAAATGCTTGGGTATTCA
TAATTTTCAATCACAGGCTTCGATTCGAAGCTTTGTGTTTGCATAGAATA
GTCATTCTCCCAGGGGAGGGGCAAGCAGTTAATACACAACACTATGTGCA
TTAACTACTTTTTGGAATTTTTCAAAAAGACCACCACCCCTTGACACTTA
GTTCACTGTGTATTAATCTGTTTTTGACCCATTAAATATATACACCACCC
CAAAGTGAGTTTGTAGCGGCTGACAACCGTCTCAAGCAAATCCACTGTGT
ATTTTCCCGTTAATTTGATGCAATACAAGGGGTTTTAACTGTTTTGAGAC
TACTTATGTCACAAATTTACGTCATTAGAAAATTTAAATTAAGTTTTTGT
AAGTCCGGGTTCAAATCCCTTGCCAGACAGTTACCTAATAAATGCAACAG
TTAAAATTTTTAGATTTTGAGTAAGCAGAAAAAGATTTTGAGTAAGCAGA
AAAAGATTTTGAGTTTTTCCAGTTGCATGGTTGCTTAGTTTTAAATACAC
CTTTCCCGTAAATTCAAACTTCTCAGAAAAGGCCCAGGAAAATGTGCGCT
CCACCCTTGTATATAAAATTGTTTGGGAGATAAATGAACGCGTTTTTGCC
TGCGAGGGGTTAGGGAAAGTGGGTTTCCAGCTTCTAACTTTTGATACCAA
CCTTCTTTTGGCAGAAGATTTTCAGGGTGGTATAATATCATGAATAGATA
CTAAAATTTGAGGGGATTTTGTTTGACAGAACTTAAGAAAAGCTCAAAAA
ACCAACTTTCCCTAAGGAAACGCAGGCAAAAACGGGTTTGTTTACCTCCA
GAACCCAAACGGTGGAGAGCAAAAAATAATGCGCACGCATTAGTTTTACG
GATTACGGGAAAGGTGTATTTATAGGAAGTGCCAAAATATGGTCAGGTAG
GCAGTTAATGCACTTTTTGACTTCTAAAATTGTCTTAACACCACCCCTTT
TGACAGTTAATACACTGGTGTATTAACTGCAATTTGCAAATTTCAGAAAA
GGACCCACCACAGTACTAAGTGTCATGGGTGTCGTGCAGGCTAGCTCTGA
AGCTCTAAAACAGCATCTAATAACATGAAAACCAGAATATGATTATTCAA
TGGGAATCAAAACTATAAAGTGTACTTACAAACATCAATATGTCTGATCT
AACAAAATTTATAACGGCACTGTCATCATTGACAATAAAGCAAACAATAT
TCTGTCAAGAGTCTTGTAAACATTCCAACAACTTCCATCGAAATGATCTA
TCACAGCTAGGTCTACCATTTTTAGCGGGGTCCGAGGATTGAGCCGAAAA
TGCTTGCAGAATGCTCGCAAACACCCGCGCAGGTGAAAAACTTCAATCTG
TCAATCATTTTCTCAAGCGAAGAGTACGCGAAGCGATTCTAGCTTTACGA
TAGTGACTTCCGACCCCTTTTTTCGTAATCTTCAGGCAAAAAAACATTAA
ATATCAAAACCTGGCAAAAAACTTTGAAGTTGACCTGAACCTGACTCGAA
CTCGGGATCCCTAGTGCAAGAGCACAATGCGCTACCATTAGGCTGACTTC
TGGTGATATGGTTAAAAATTTTAAGGGTCTTATCCCTTGGTCAGACAAGA
CCTACATTAAGAATATTTCACCCTCAATTTTGGCACTTTCTTTTAAGAAT
ACTTGACCCTCAGCAAAAGTACACTATTCTTATAAAAAAGCGTTCAATTC
TTAGAGCATTTAGAAGATTTGACCAATTGTTTGTCGTAAAATGGCTAATG
CAATAACACCAACGCATTTTATGATGAAATCATAATGAAATTATAGCGCA
TCCCAACGCACACATATCATTACACCTGGTTGTCCGAGAATGAAATTGGG
GAAAAAAATTTTTGAAGGTGGGCCAAAGGGTAGGCCAAGGGTAGGCCATA
TGGCCCGGGCCAGAGAGGTATCATGCGTTTGCGTAGGGTAAAATGGCGAA
ATGCGAAAATCGATTTTGGCAAAAATTTTTTGAAAAATGACCCTACAAGA
TTTGACTATATCCTTTTACTCTATGAAGTAATTACTTTTAAATTAAAAAT
ATATCGACAATAAATGGGTAAGCTTTCTAGAAATCCAAACACAAATTGCA
TAGCTTTTTACCAAAAAATAGCACTTTAGGATTAGAAACAGTCAAAAACC
AGCTTTTTCCAATTTTCATCCAGTTACAGGAATTAATTCCTTGTTTGTTT
TGATCTGAAATTTTCAGTAGGGGTAGCCAACATCGTTTCCTCGCTCATAT
CAAGGCGGCCTGGGGCGGGGGTAAGAGAATTAAAGTTTCTAAGTAAAATC
TTAATTATCACCCAAAAAAGTGCTTTTTTGTCCATATCTTTTAAATAGAT
AGTCCCAGCCTTATCCCTCCTTCAGTAAAGCTTCCTATACCTTTTGTCCT
TCAGAAAAGCCTTATTGGCCTTAATTGTTCGCTTTCAGTTCCTGTAGCCA
GTAGTGTGACCCCCTGTATTTCTATTTCATTCCTCGCAGGTTTTTCAATA
GAGATGTCACATGACTCAAATCCCGCGTCTTGGCGGCAAGAAAAGCAAGT
CTTTTGCTTTGGACAAAAGGTTGTAAATTCTGGTTGATTTTAAGGTTTTA
TCTTATCTTATCTCATTTACTTTAATTACAGTAGTAGAGGCTTCTTCAAT
TTTTGNTTGCTTTGGACTAAAGGTTGTAAATTCTGGTTGATTTTAAGGTT
TTATCTTATCTTATCTCATTTACTTTAATTACAGTAGTAGAGGCTTCTTC
AATGTTTAGGGAAGGTAAAGTCTATAAAAGCTATTTGTTTTTCGGTCAGT
TTAGACTTAAACTTGTATATCAAGATTACGGGATTTCGAGTACGGGCCGA
TTTTACTTTTGTTTTGAGTGGCCAACATCTTAGCAACGGTGTGCTCGCCC
ATAGTTACAGGGGTTTGTGCAAAAAACTAAACATAGAAAATTCTCTAAAT
CCCCCATTTCAATGAATGCAATGAAAAATGAAACTTTTCTTTGTTTCACT
TTTTTGCACTTATTCTTCAAAATGAAAATATTTAAGATTTAAAGTTCTTC
TTTTATTCAATGATTTTTTACGGCACTTTGTTGACAAACTAACTCTCGCA
TAAAATTCCCCCTTTCTTCAGTAAATTGAAGATGAGAAAAAGCCTAAGCC
ACGGATCACGGATCGAAACAAATATATGAAGGGTGGGATTTTACAGCCGC
CCATCGTGCAAGGCACTGAAAGGCCATCGGTGCCAAAAAGAAGGGCCGTT
TGAAATGCGGCTGAATGCGGCAACCTCGTTGGTGGAATATGGGAAGCAAT
CAGTAGAAGAGGCCACTTTCGTTTTTGTTGCACATTTCTATAAAAACTTA
CTCTCAGGGATTACTTGTCAATGTACATGTACATGTGTTGTGTCAACTTG
TCAGCATTGTATCGTTGTAAAGGGAAAGAAAAAAGGGGTAAAGACTAGCC
TAGTTTCTAATCCTGATATAGGAGTTTAAGTTTAGACTGTTGGTGGAGAA
AAGTGTTTAAAAAAGTATTTTTTGTGCTCAAGGTTTCTTTTTCTTTGCAA
ATTTTTGTCTTCAATCTTAAATAGATGAATGAATATGTCACTGATGGTTA
TGATTTTTTTCACAGAACATACTTAAACTATTCAGGAACTTGGACCTTTT
TACAGAATTTCAAAAAATCTATCAGTTCTAGAGATATATTGAAAAGTTTA
GACATCGGTAGTTCGCGTTTGCGTTTCGCGTTCCCAAACCAAACGCACGT
GAGGTGGGCCAGGTTTTGTTGTTCAAACCCGTTTTTTTTTGCAAACTTCA
AAAAATGATTTTTGTCCTCCTTTATTGCAGGACTTTAGCTTAAGTGCTTG
CGTGCAGCAAGGGTACAAAGTCCAAATATGCGTTTCCCGTAATTTTTATA
TGAATAGTTAGGTCTATACTGTCGTGTATAGCCTGGAAATCCAAGCGTTA
AACTTTTTTCACAGTCTAGTTTATGATATTTTTGCTGCTTGTTTAACGCT
TGGCGCAGGTATTCTCGCCTGCAAGGAGATTTTTCCCTTCCCTGTTCAGC
CTGATTGGCCAGCTTTCGGCGTATTACTTAGCAGTATTTTCGCGCGCATT
TTGATAATCAATGAGCGCATAAATTATGGAAAAAGCTGACTCTGCAGAAA
AAAGGAAAACAAATGAAAATGAAAACATAGATTCATTTAGAAACAAAATG
GCTGGATGTCTAAATACATGTGACTGATGTTTTGATGTGGTTTTTAGTAG
TATTGAAAGTCTTTAGAGCTTGTTAAAGAGTTTTTATGGTAAGTTAATTA
TGTGTGTTTGCCTGGGTTTCCAAAGTTCAGAAAGTCTGTCGACAACGGTT
CATACACAGACTGTTTATAACATTCTGTGTCAGACTAATCTACCTGCACC
AAGCTCTATAATTTTAGAATTTTGTATGTTGAGGTAAATTTTGTTTTTTC
TAAGATTTTGAGCTTGGATATCCAGGCTATGTCGTGTACTGTAAGTTGGT
CTAATATCGACATCCCTCGTCTAATACGACCCACGGCATGGCCCGAACGG
CCATGTAGTAGCAAACAAATTTAAAAATTTCCATCTTTAGTCAAATATTG
TTCAAATATAAAAGTTAATCATCTATTTTCCAATTAAGTTAGGAAAATTA
TTAAAAAGAATGATTTGAATCTTACATAATATGGTCTTCTTTTTATTCTT
TATCCCGTTCCCTTTTCTCGTGGTCTTCTCCTATTTTCGAAGCAGAATTT
TTCTGGATCGTTTTTTGTACTGTTATACAACTTTGTGAATCAAACTGGTA
TTTGGAACTTTGAATTTGTCTAATGAAAATATTTAACAATGGATGATGAT
AAACCAGGAAAGGTAAATAAAATTAAATTCTACTTTTCCTATGATGTTCC
TTTAAAGACATGATAGCTAGATTTGTTTGTTGGGAACATGGCCCAAGCAA
ATCAATATTAGGGTGGACAGGCCAAAATTTTCCCCTCAATTTTTAGAAAC
CAAACTAATTTTATTTGAAAGTCCTTACCTTTGTGAGAAAAATGAGGGGT
CATTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGGA
TGATTTAAAGGTAAGTACTAATGCCTTGAAGTTCATTTTTGTAAATTCTT
CCTCGTTCCGCGCAAAAAATCCCGACGAGTGCGCACCCTATCAATATCAA
TTGTAAATACATGGCCCGAACATGGTCCGAAAAAAATGTTCGAGCCGATT
CAATAATACTTTTTTGTGGCCCTCGAGCATGGTTCGAACAGGCCCGAACA
TGTTCGGGCCATCATGCCATGGGTCGTCGTCTAATTTTTAGGACGTGTGT
ACCCTTCTTTAGAGAAAGGATGAAAGCTAGAATCACTGATTGAAAAAGGA
TTATTCCTCTCTGACCACCAAACAAAGAAAAACAGTTTCAACCTTTCTAT
AAATTTCAGCTGATAAAAAGGGTCTCAGAATTAGAGGAGGGGTGTCGACA
TTAGACCAAGTTTACGGTATTGCCCCCCCCCCTGCCCCCCCGTGATTCTC
CATGCAACTTGCCAAACTGATTTGAAAACCTAGAAATAAAGTTAGCTGCT
AGGAATATATATATATCAAAAGTATCTTACTTTAAACAAAATAACACAAC
ACCCAAATCCTTTTGCATACAGTAGTGTCAAAAAGGAATTTCAGAAAGTC
CCCTCACAGCCATCCATGCCATCATGGAGGAAAAAAGAGAACAGAAAAGT
GAAAGTACTATTTTAGCGTGCGCGCGAAAATAAACCCGATTCGGATTTAT
CTGATATTCCGATGGCGNNNNNNNNNNNATTGGCGGCCGCCCACGCTAAA
GCTCTAAAGGGAGCGGGCCAATTTCCCATCGGAGAGGAATGATAGTCGGC
CTTTGATGTGCCGCATCCTCAGTCAGGTTCAACAGCCCTTGTCCGTGAAG
TTGGAAATATTTCGGTTGGACCCGCCAATCCCCAAAAACGAGGGCTGGGT
TACCAGACCTCCTGCTGCAAAATTCTTGACGCGGTCTCGCAAAATTCCGT
AATGTAAACAGATGTTGAAAATTTTCCCGACCTTCAGAGCTTTAGCGTGT
CGGATGAAAATTTCACCATCTGGGTGCCAGATAAGATTCGGATTATATCT
GATATTTCGATGGCGAATTGGCGGCCGCCGCCCACGCTATAAAAGCTCAA
ACTCTAAAGTAAAGAAAAAGAATGAGCAGGCCAATTTTCCAGACCTTTCA
TTTAGAGCTTTAGCCCCACTTTAGCAAGATAACGATTTGGAATAATCAGA
TTTAGTGTGGCGTGGCAGGCAGCCCTGTTTGCATGCTTCAATTACGCACA
CACGGTTGGCGTCGCAGGGCGCGAGTAGTACCCTGAGTATCAGAGGCCAA
GTTTTCAAAGGGCCCCCCNAATTACGCACACACGGTTGGCTGCGCAGGGT
GCGAGTACCCTGAGTATCAGAGGCCAAGTTTTCAAAGAGAAAATTTATTC
GCGCTGTGATACTCACGGTAGGGCGCGAGGGGAGGGGGTCGATCCAATAT
TTCTTGATCTGTCCGATCAACCTTGTCCCGCCCCGTAAATTCCAGGCTTT
ATTCACATTATTTATGGACGCCAGAGAATACCCTAGTGTAGGCTGATGGT
ATTATCTAGCGCTATCAGTAGTAAGCATAAAAAAGCTGATAATACACAGC
AGGGAACGAGGTTTTCGTCTGAGCTGATTGAATATTATTATCCTTTTGGG
TTCCAAAGCTTAAATTTGGCACCCGTTTCTCGTGTTTTGGCGGAGTTAGG
TGTTTTAGTGCCCTTCTACTTTCAGAAAAGGGAAATGTTTTCTCCTTCAC
TGTGGCTAGATGCCTAGAATAATCTGATATATCTTGATTTATACTTGATT
CTTACTTGCAAGGATCATCAGAAAACATAAGGATTATGGTATCAAATAAC
ACACAGCACATGACTTCCTGCCTCCTCTCCTTGTCATTTGAACCTACTGT
TAGTATTACTAGTAGTCTCATATGATATGAGAAGAGATAGTACTTTTTTA
TCGGAGTTTTTTTTAAGCAGATAGAAATGGTACGTATATATACTATTGAT
GTATTATGCAAACAAGTCAAAACAAATCATGGTAATCCCAGGACTGATTC
TAGGAATTTCTGAGAGGATGGCATTTTTCCGGGGGGCAAAGTTCCTAGGA
GTGGAAACTGTACGGGAGAGTCCCTGGGGGTAATCTTCCCGTATATTGAT
TGCACGCCATAATGGCTGTTGGCTAGACGCAACAACGTTCATTTTTAACC
AATCAAAAGCCAGTATGTTATCAAAGCGCAGTGGTCCTGACGGGGAGAAA
ATCTCAATCCCTACCAAGTTTGTTCTCTTCGAACTTTTGATTTTTGGACT
TGGAACTTTAAGGTCTGTTACTAAACATCGCAAGACAGAGTCAAGTTACA
ATAGAATAATATGAGTTATGACGTAATTTTGACATATAAAGATTCGATCT
TAATCAAGACTCGAAGTTTTGCTGACATCGGGCAGTTTATCGAATCTGTA
TCTCTCACAATTTTTTTCAGCTGAAACTTCTAGCTCTTTTTTGCCTTATT
GGCGTTTGCGTTGCTTATACCATCGAGAAAAACCCTCAAGTTACAGATAA
TGAATGGCATGTATGGAGATTAACACATAAGAAAGTTTACAAAGATTTGG
ACGAAAAAAGAGTTCGTTATGCTATTTGGAAAGATAATGTTCAATACATC
ACTGAGTTCAATGCTCAAAACAGACACATGAAATTGAAAATCAACCATTT
CGGAGATTACACCAACCTTGAGTTCAGGTTAAATTTCTAATTACATTGTC
CTTGCGCACTGGTGGATTTAAGACAATAGAGGAAGCATGTCGGAAACCTG
TGAAGGAGTGCAACGCTCGTTAAAAGGCAATGAAATTACAATTACAAATC
TCTTCCTCTGATAAGTCCGACATGGTCTAAAACCACCTTTACTTGGATTT
CGGAATAAAAGTCAAAATATTTCTGTTAAAACGTACAAAGTGACTCTTTA
CAGATGCCTTATAAACGAAGCTCCCCACAACCTTGCTTGTTAACTTTTCA
ATTTTTCTACCCCCTGCCATTACTAGGACCCGCCCTGTTTATTTTGAACG
AATGTTCAGTTGTCAAAGGAAGAGTGTCTTTTCTTACTCCAAATAGCCAG
GTTTTAGTCTCTGGATTACCTTATTCTATTTTGGAGGTATTTAGATGTAT
TTCCAGTTGCCAGTAACTAGGCACCTGAGAGTACTAAAGCCCCATAGCTC
ACTTTCTAATAATTCTGATAGCGCTTCCGATTGTATCACGTCCATCAGTA
AAATTAAAAAGTAGTGCTCTGGGTACGAGATTACTTTTCACCCTTTTTAG
ATACTTGACAAACGGTCTCAGTCTAGAAAACAGAACATCCAAAGCAACTT
CCTTCTTGCAGCAAGGTGATGATGGACTCCCTGATAGTGTTGATTGGCGA
AGTAAAGGTTACGTGACTCCTGTTAAAAATCAAGGAGTGATGGGGAAATG
TTGGGCCTTCTCTGTGGTAAGAATTACTTTCTTATTTCATTTGGTACATT
CGCGAAAGATGCGATGGAACCAAAAATATAGCGAGTGAGGAGGTGCACCT
TCGCGAATGGAAGAAAATTTTGATGTTGACCCTGTAATATGCCTTGAAAT
CAAAACAGCCCAGAAAGAAAACTATTGAAAGTATGAACCGTGATATTTTA
CAAATATCATTTTATTTGAAAAAAGTGAATGGGTCATGTCTGATTCTCGA
TGGCGTGGACTCGGTTTGTTACCGAACATGGTTTCTTTTCTATGTTCAAA
ATATAATTGATAATTGAGTATTTTAACGTTTTTCAAAATTTTAAAGTTCG
GATGAGAGTTGTTATTTTAGTACTTCTACTTTATTTCATTTGGATATTTA
GATTTTGGAGGGAGTTCAGTATGGCTTCTAAGCTATATTCTCAGCCTCAT
TGGGGCAGTTTTGAGCTCTTCATTGAGATCCTAGGGTCCTAAGACTTAAG
TCCCATGTTAAAACTCTACGCTCCGGAAGTAACTTAGTAAACTTAAAATT
TTGACCTTTTTATGAAATTTTTTGTCCATCATGTAGAAGGGACGTTGATC
CTTTCCATGAAAAAAGAAACTAGAGAATTTTGCGGTGCTGCTGATTTTCA
AAAATTAAATTTATTAACACACCCCTCTTAGAACCCTAGTTGAGGTTTTT
CCGGGGGTGAAAGTTTCTATCGAAATTCCAATGTAGATAGGAATTCTATT
GTTCCCAGCTCAAAATTTCAAGTGGGAATTTTCCAGTGGGACTGGGGTCC
GACCGGATTTGTGACAAAGGGGTGTATCAATGAGAATATATCCTAATGAA
GTTTTCAATACAACGAATGAATAAATTTCATATTTAAGACAGTGTCTGAC
TTTCTACTTCTTGTTCTAAGAAAGACTTGATAAATTTGAATTAAATCTCA
AATTTTTAATCTGTTTGGCATAACTTTTAATTACAGACAGGTGCATTCGA
AGGTCAACTATTCAAGAAAACAGGAAAATTGGTCAGTTTGAGTGAGCAAA
ATTTGGCAGACTGTGTGAAGGGGTTTGGGTCGATTGATAATGGATATAAT
TACGTTATGGAGAACGGAGGTTTAGATACAGCAGAGGGATACCCTGGTCC
TGGCAAGGTAAGGTTTGATATGTTTTCTAGAGACTTTAATTATAACGTAT
TTTGAACGTGCACGGCTATAAGATCTCCACATCCTGATATCTATATATCC
AAATATCCTATATATTCTATTCTGCCGTACAATCAAACGTACCAAAACGA
CAAAAATTCGGATAGTGCTGCGGTACAGCGACTTTGAAAAAAGCAAAGCA
GGCTGGCGCTTTATCCAAGAAAGACTTCTCGAAGAGTCTCTCCTAGCTTG
GTTCGTCTCTTGATTTGTTCGAAAATGGAAATGTTTTCATTTGATTGTTT
AGGGAACTTTTCAATTGTTTTAGGTAAATACGGTAAATCATCATGACATG
TGTCATAGAATGCTAAAAGATCTATTACATAAAGTCATGTACATTAATTT
CCCAGCCCGAAGGGCTAGACTCAAGACTTTTGGGAATAGGCCATTTCACG
GTCGAAATGGATCATGGGTAATCAGGACTGATTGGGCCTCCATTACGGCT
TCCCGTTGGCTAGACGCAAAAATCTTCAATTTTTTTCAAAACTTTGGACC
AATAGTAAGTCGTTATTAGCGCGCAGTGGTCCTGATTACCCATTACGCTT
TGCGACTGTGAAATGGCCTATGAAGCTACTTAATTTAATCCAGAACACCC
GCGCGTGGTTTTTACACAAATGCCGGATCGAAAGTAAAATCTATCACTAG
ATTAAAAACTGCTAGATACAATCCGTCGTCATAATTGCAGCGCGTTCTAG
GCGCGTTCTGGATGGGGAATAAGTAGCTTCAATCTGGCCCTTCGGGCTCT
CAACTCAAAGGTATTGGTATTCCATCGGATAAGCTGGGAATTATTTCTAA
TGTGAGCACCAAAGTTTAGCTTCCTCTTAAATTTAACCTGTGAAGAAAGA
TTGTATCAATCTTTTCTCGCTCGTCTCATTCTTATTGTTTAAAGAATTGT
ACATACATCTAGTTTTTAACGATATTCTAAATTGTGTAGGGAATTATCTT
ATTCCGAAAAGATTCTTAAAATTTGTGCAACCATATCACTGAGATGGACG
GGAAGAAGAAAAATATCAGTACCGTGAAAAGCACAGCTCAAAATCATATA
TTTACGCTGTGCCGACGAATCGAGATTCTATTCATCGCGCAATCAGCGAA
GACAAAAGTAACCATGACGACCANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAGACATTAATATGGTAATATTTGCTCTTCATCTTTGATTTTTTCTACAG
TGATTAGATTGACACATGCGCGATAAAATTTCTATTATTTGTCTTCATAG
GTTACTATTTTCTTTGAAAACGTAACCTATGATACTCAGGGTAAAATATC
AGCCCTTTACTTCAGAAAACTTTTAAGGCTGTAGCTTTATTTCCCCGATA
AATATATTCTTCTCACCTTTGGCACAAAAGCTTATCTTGGTCTACTACCA
CAAGGTGAATTATGAGCCGTAGACCATATGTGACCACGTGAAGTTAACGG
GAAGACTGTCAGAAAAGTCCTAAATTAGTACACTTTCAAAATGAGAATAT
CGAATTTATCCATCCAGTGACAATATCATTATCTATACTTAAGGTTGGAG
AATGCAGATATAATCCTAATGCGATCGGTGTCACGTGTACTGGTTGGGCG
GATCTTTTGAAGGGCGATGAGAGCGCCCTCCAAAAAGCAGTGGCGTTAAT
CGGCCCTATTGCGGTCGGCTTTGATGCCAGTCACAGGTCCTTCCAGTTCT
ATTCAAGTGGTGTTTACAGTGAACCTGATTGTTCAACAAGTCAGATCGAT
CACACAGCTCTGGTGGTTGGATATGGAGCAGAGGATGGAGTGGATTATTG
GATTGTCAAAAACAGGTATAATTTACTAGAATATATGAGTGCGAAGGTAG
AGAGTATATCACTATTTTCCCTAACATCGAGATTGTCAAAAACAAAATTT
GTTTCAATATAATTTAGCAGTGGAAACAAACAAGGGATCCACTCCTGTTT
GTCTTTTCAACAACACAATTCGCTATCTTTCGCTAAATTCGAACTCTATC
AAAAGAGAGTCTCTGCTGCAAATTATATTGGGATAGACTTTATTTGAAAT
ATCTTTTAAGATTGAAATTGCAATTATCTTGATTAGGCGTTACCCTTTCA
ATACTTAGTTTTAAACAGCCAGAAAACGATGAATATGAAAATGGTTTTAG
GATAGTCTCAATCTTTTACAAATAACTGAAAGACTTGTCTTTTTAGCTTT
TTTATCTTGGCTTTTCCAACTAGAAAATCATAAACTAATAAGAAAAGTTC
CATCTTTTTTGCAATCTTGATCGAATTCGTTCTATTTTTTGACTCCTTGA
GGCTTGTAGCAATAAAATCTTAAATAACAAATTGAGTTTAAGCATCAATT
AAGAGCATGGAGATATATGGAGATTTTTCAGATACAATTTTGAAAATCCC
AATCAAAATACCTCGGATCTGAGGTTGAATACACCAGTATTTTTCTAACT
TACACTTTATGAGAGCCAGTAAATTTTGGCTAAGGCTGGGTTTTCCTTAA
TTTTATGAAACTCACAGGCTTACATGTTCTCAATACGCCCAGTTTCTTTA
TTCAAAAACTTAAACTTGGCTTAAATTTTTTTTTTAGAGGTCATCGCGTA
AGTAATGTTTACCATCTAAACGTTCAAGCATTTTCGGAACGTACTAGAGA
AATCATATACAAGTCGGTATTGAAAAATATAAAATATACTATATACCGGA
GCCTGTCCCTTTTGGATTTGAATAAAATTCTACTAGAATTATGGATTATG
TATAAGAAAGAAAGAAAACATTTAAATTTCATCTTGAGGGAGTCGTACTC
TACCTCTCGATCCGATGCATCTCACTGTAGATCTAACGAGTGAGAAGCAT
ATGATCGTTTTGAGAAAGTTTCATGTCTTTTTGTCTGCTATCATTTCAGC
TAGACGCTTGTAAAATAACGTACATTCACGTTCCATCGCCCCATTTGCCT
CAAAAACAAGCGGAGAAAAGGCCCATTTTTGGCTTAGCTTAAATTCTGTA
CTTTCTAAGTAATTTCTGAAATCTGAGGCTTAGGATAGTTTTCAATTTGT
TCTTAGGTTTTGGCCGATTTTCAGCCTCTTGTTCTTATAAAATAGTTCCT
ATGAAAAAAGCATGTAATTTTCTTTTTTTGCTATAGTTGGGGAACAAACT
GGGGAGAGAAAGGTTATGTCAAAATGCGAAGAAACTTCAACAACATGTGT
GGAATTGCAACTATGGCTAGCTACCCGTATGTTGAAAGATGAAATGAACT
CACAATACTTCTTTGACTATATATATGCTTGTTAGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037365XLOC_037365Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059354-exon-scaffold_326-1575043694:283033..283118TCONS_00059354-exon-scaffold_326-1575043694:283033..283118Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1575043694:273492..273748TCONS_00059354-exon-scaffold_326-1575043694:273492..273748Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1575043694:272753..272918TCONS_00059354-exon-scaffold_326-1575043694:272753..272918Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1575043694:271612..271782TCONS_00059354-exon-scaffold_326-1575043694:271612..271782Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1575043694:269404..269675TCONS_00059354-exon-scaffold_326-1575043694:269404..269675Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1575043694:267931..268082TCONS_00059354-exon-scaffold_326-1575043694:267931..268082Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1510915933:283033..283118TCONS_00059354-exon-scaffold_326-1510915933:283033..283118Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1510915933:273492..273748TCONS_00059354-exon-scaffold_326-1510915933:273492..273748Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1510915933:272753..272918TCONS_00059354-exon-scaffold_326-1510915933:272753..272918Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1510915933:271612..271782TCONS_00059354-exon-scaffold_326-1510915933:271612..271782Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1510915933:269404..269675TCONS_00059354-exon-scaffold_326-1510915933:269404..269675Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1510915933:267931..268082TCONS_00059354-exon-scaffold_326-1510915933:267931..268082Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1491911889:283033..283118TCONS_00059354-exon-scaffold_326-1491911889:283033..283118Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1491911889:273492..273748TCONS_00059354-exon-scaffold_326-1491911889:273492..273748Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1491911889:272753..272918TCONS_00059354-exon-scaffold_326-1491911889:272753..272918Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1491911889:271612..271782TCONS_00059354-exon-scaffold_326-1491911889:271612..271782Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1491911889:269404..269675TCONS_00059354-exon-scaffold_326-1491911889:269404..269675Clytia hemisphaericaexon
TCONS_00059354-exon-scaffold_326-1491911889:267931..268082TCONS_00059354-exon-scaffold_326-1491911889:267931..268082Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_326supercontigscaffold_326:267931..283118 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	5.03237	2.98429	5.95579	5.86093	2.64039	4.87302	4.72905	0	2.52228	2.89369	2.06187	1.8092	0.622794	1.62616	7.01694	3.74886	0	0	0.941031	0	3.00728	4.47306	0.588305	1.01798	1.01729	0.898781
Blast
[Close]
BLAST of TCONS_00059354 vs. Swiss-Prot (Human)
Match: CATL2 (Cathepsin L2 OS=Homo sapiens GN=CTSV PE=1 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 1.360e-95
Identity = 160/334 (47.90%), Postives = 202/334 (60.48%), Query Frame = 3 
Query:   93 LLALFCLIGVCVAYTIEKNPQVTDNEWHVWRLTHKKVYKDLDEKRVRYAIWKDNVQYITEFN---AQNRH-MKLKINHFGDYTNLEFRYLTNGLSLENRTSKATSFLQQGDDGLPDSVDWRSKGYVTPVKNQGVMGKCWAFSVTGAFEGQLFKKTGKLVSLSEQNLADCVKGFGS-------IDNGYNYVMENGGLDTAEGYPGPGKVGECRYNPNAIGVTCTGWADLLKGDESALQKAVALIGPIAVGFDASHRSFQFYSSGVYSEPDCSTSQIDHTALVVGYGAE----DGVDYWIVKNSWGTNWGEKGYVKMRRNFNNMCGIATMASYPYV 1049
            +LA FCL    +A  + K  Q  D +W+ W+ TH+++Y   +E+  R A+W+ N++ I   N   +Q +H   + +N FGD TN EFR +  G     +  K   F +     LP SVDWR KGYVTPVKNQ   G CWAFS TGA EGQ+F+KTGKLVSLSEQNL DC +  G+       +   + YV ENGGLD+ E YP       C+Y P       TG+  +  G E AL KAVA +GPI+V  DA H SFQFY SG+Y EPDCS+  +DH  LVVGYG E    +   YW+VKNSWG  WG  GYVK+ ++ NN CGIAT ASYP V
Sbjct:    6 VLAAFCL---GIASAVPKFDQNLDTKWYQWKATHRRLY-GANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMM-GCFRNQKFRKGKVFREPLFLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334
The following BLAST results are available for this feature:
BLAST of TCONS_00059354 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CATL21.360e-9547.90Cathepsin L2 OS=Homo sapiens GN=CTSV PE=1 SV=2[more]
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