TCONS_00059405 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059405
Unique NameTCONS_00059405
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1944

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059405 ID=TCONS_00059405|Name=TCONS_00059405|organism=Clytia hemisphaerica|type=transcript|length=1944bp
TGAACagatataaaaatgaaaacaaaaaagtacaACACAATCGACCAGTT
TGTTGCAAAACAAAGGGAGCTACTAAAATTAGAACAAAGCGAGGAAGTGT
GCCAAAGGCAACAAATTTATGAGAATAAATCTATCAAAGAACTTGTGAAG
CGAGGAGTTTGTGTTAACCGGCTAAAAGTGGATCATCACAGAACTGGACT
ATTTGGAAAACACGTTATAGTTTTCAACTTGAACACCAGTGATTTACATT
CCCATAAATTATCATCTGgAGATATAGTTGGTTTATATCCAAACAAAGGT
GACAATGGTGACCTTATTGCATCTGGCTTGGTTGCTTCATCGAGACCTCC
AAACATAAGTGTTGCTTTCAATGAAGCCTTTGACTTGTTAGCAACATCAC
TTTATCGGTTGATGAAGCTTACAAATGATGTCACATACAGAAGGCTTAAC
AGtgCTATCAATAACATGGAAAAGTCAAACAAAGAAACAAATCCATTCTT
CGCTGCACTTTTTCCTTGCAAGACAGTTGAAGATAGTTATATTAATCCCA
CTGTAAAGATTACCCAACATTTCAACCAAAATCTTGATCAATCACAAAAA
GATGCTGTGTATTTTGCAGTATCCACCTCTCTACCGTTATCAGTTATCCA
TGGCCCTCCTGGAACCGGAAAAACAACAACGGTGGTGGAGATCATTCAAC
AGCTCatccaaaaatttcataaaaagattttagtctGTGCTCCATCCAAT
ATTGCAGTTGACAATTTGGTTGAGAGATtggcaaaattaaaaacaaagGT
TGTTCGTCTTGGTCACCCTGCAAGGATCATTGAAGATGTGCAGCGATATT
CACTTGATGCTATCATTGATTCTCATGATTCcagtgacgtcatcagagag
ttGAAAGCTGAAATAACAACAAAATGTGCTGCAAAAAGTAAAGGTGGCAG
CAAGCAAAAATGGGATGAAGTGAAGGTTTTACGTAAAGACTTGGCGCACA
GAGagcaaaatttgatgaaaagtattCTTGTTGATGCTGATGTCATATTA
TCAACAACAACCAGTGCTTCCAAAGAAGGTCCATTAAAATTATTGGAGGA
TGATCATTTTGACTTACTGATCATTGATGAAGCTGCACAGGCAATGGAAA
TAAGTTGTTGGATACCAATGCTTAAAGTAAAGAGATGTATATTGGCTGGG
GATCATTTACAATTGCCACCAACTATTATCAGTGAAAAAGCGGCAAGAGA
GGGCTTGGAAGTCACCCTGCTAGAGCGAGTTGTACATGGGCTTGGTCAAA
ATGCTGTACAAATGTTAACAACACAATATAGAATGAATGATTTGGTCATG
CGCTGGCCATCAGAAGAATTGTATGAAAACAAACTTGTAGCTGCAGACAT
GGTTGCAAATCACTTGTTATGTGATCTAGAAGGTGTTACCAAAACTGAAA
ATACTTCAAACCCATTGGTTTTTGTTGACACTGCAGGTTGTAACATGTAC
GAACTGGAGGATCAAGAGGAAGATTCAAAAGGGAACACATGGGAAGTGGA
CATTGTCTATGAACATATAGTACAATTGGTTGAGGATGGAGTCAATATGC
GACAGATTGGTGTCATCACGCCCTATAATCTACaaGTGGATATGATCCGA
AAAAAGGTGCAACCAAAATATCCATCGATTGAAGTCAATTCTGTGGATGG
ATTTCAGGGACGTGAAAAAGAAGCCATCTTGATTTCACTGGTCCGGTCAA
ACCAAGAAGGCAAAGTTGGTTTCCTCAAAGAGGACCGACGTATTAACGTA
GCTATAACGCGAGCACGTCGTCATTTATTCGTGGTTGGAGACACGTCAAC
CATTTCACGTCATCCGTTCCTTGAGTCGTTCTCTAATTTCATGTTTGAGA
AGGCTGTGGTGAGGTCCCCACTTGTAGACCAACAAGATATAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_327:171202..181355+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059405 ID=TCONS_00059405|Name=TCONS_00059405|organism=Clytia hemisphaerica|type=transcript|length=10154bp|location=Sequence derived from alignment at scaffold_327:171202..181355+ (Clytia hemisphaerica)
TGAACagatataaaaatgaaaacaaaaaagtacaACACAATCGACCAGTT TGTTGCAAAACAAAGGGAGCTACTAAAATTAGAACAAAGCGAGGAAGTGT GCCAAAGGCAACAAATTTATGAGAATAAATCTATCAAAGAACTTGTGAAG CGAGGAGTTTGTGTTAACCGGCTAAAAGTGGATCATCACAGAACTGGACT ATTTGGAAAACACGTTATAGTTTTCAACTTGAACACCAGTGATTTACATT CCCATAAATTATCATCTGGTAATTATTATTGTTGACTCTTATTATGTCCA CTAGCAGAATAGAAAATGTTttgacaaaaagaatatttaaattcatgACT TTACTTAAGTGAAGATACTTGGTTATGAAAAATgatagatttttttaatt tttcaatgcCTTGTTACAATGGTAAGTAAATTAAGAAACTTTGTGTTTTT TAATGTAGGTGAACTAACATTAGATTTCCTTTCTTTTGCTGCTTCATTTA GGTAATTTCAGACTTAGATTTACAATCAAATCTTACTGCCTtcttttttc actcaaaaattagcttctttttttctatttaggAGATATAGTTGGTTTAT ATCCAAACAAAGGTGACAATGGTGACCTTATTGCATCTGGCTTGGTTGCT TCATCGAGACCTCCAAACATAAGTGTTGCTTTCAATGAAGCCTTTGACTT GTTAGCAACATCACTTTATCGGTTGATGAAGCTTACAAATGATGTCACAT ACAGAAGGCTTAACAGGTATGTCATGAGCGAGTAGTGATCTTTTGCATTT TTTAGAGACATGAATTATTAATAAGGTCTAGACAAGCCATCTAATTGATT GACATTTGAGATGCTTTCAGGTAAGATTtaagaaaagagaaagagatCTT TATCTTTGGAAGTCCAAATAATTTTGGTTTGAAGGTTGGTTGAGGCAAAG CAAATCAACATATTTTTAAGGCCAGCCCTAATGAACCAGAACCTTGTATG ATATTACTGACATTTTTGTTGCAATGAATGGCAATGGCCATACCCAAAGA AGTGctttgaaataaataaacattttatgcaaaaagtagggaaaattaaa tttaatgaGACTTAATTCTGGAGCTTATATGTTGAATGTTCCAAGTAGTA GAATGGCAAGTaagcaaagttttttttctttcttcagtgCTATCAATAAC ATGGAAAAGTCAAACAAAGAAACAAATCCATTCTTCGCTGCACTTTTTCC TTGCAAGACAGTTGAAGATAGTTATATTAATCCCACTGTAAAGATTACCC AACATTTCAACCAAAATCTTGATCAATCACAAAAAGATGCTGTGTATTTT GCAGTATCCACCTCTCTACCGTTATCAGTTATCCATGGCCCTCCTGGAAC CGGAAAAACAACAACGGTGGTGGAGATCATTCAACAGCTCatccaaaaat ttcataaaaaggtAATAAAAAAAACTCCTCCTTTTGTTCATTGAAATCTC CAGGATATCTAAGTTCTTTAcacatgaaaattttaaggaaGGTCTacatt tctatttctttttatttaggaGCAATTTAGCAATAATTacataatttata aaaatacatgCTAGATTAAATTTTTAGAAGTAATTCCTTGTAttcaaaat tatgattttcatttttagattttagtctGTGCTCCATCCAATATTGCAGT TGACAATTTGGTTGAGAGATtggcaaaattaaaaacaaaggtTTGCTTTT TTGATCTTGTGTCATGGACAGCTGGATTGAAAAATTGATAACTCAAATAG ACTGAAGTGTCATATATATTTTATAACAATTTCCTTCGTTCTTTTGTCGA ACTAATTCTTCATAATTgcaagaaaaatatataatatatgtggTATTACT TCAAATTTCAATTAGATGCCCTGGGTGTTTATAAATACCCCTCCTTAAAA TTGTTCAcctttttggggggggggtatttaaaagaagggggtgtttattc AAGGTTAATCAGCTTTATACCCTTGCATTAAATTCTGCTTTTGTCATTGA ACATTACAAAGATTTTGATAAACTGATTATGCCCAAAGTCatctaaaaac ataattttctttGTAAAGACAAATAAAGAGAACTTTTCTAATAGCATACA TTGAAAATTCTCAATACATTTTGCGCGCAGTAGCACTTTGACCCACGTAT TAATTGATGTATATCACAGCTGTGAGTAGCAGACACTAATCTTTACAAAT ATACAATAGACAAGATAGGGCGTAAAAATTCAAGATAAGATTTCAATAGA CAAGATAGATGGACTTCTGCAACacaagcaaaaaactttatgcCTCTTTT ATGAGCtataatcaaaaatcaatttaaacACAGGTTGTTCGTCTTGGTCA CCCTGCAAGGATCATTGAAGATGTGCAGCGATATTCACTTGATGCTATCA TTGATTCTCATGATTCcagtgacgtcatcagagagttGAAAGCTGAAATA ACAACAAAATGTGTatgttttattcaaaaaacacaTTTAGATATTAGATA TTCAATATATGCAACACTGCATTGGCTTCAGACGCAAAATTATGCATCCT TTTTTGTTTTACCTAGTCATTATTTGACGTAATGGCAGAATAAATGATGA ATGTGTTTAGCCTGGGAATGTAAAAAAACCTTGGAGAGGGCTAGTCGATT TAATCATCCATTTCACAAGTTCTTGGAGTATCAGAATTAGTATTATTTTA CCAGGAGGGAAACTTTATTACAATTACTCAAAATTATATGTATAAATAAT AGtaatattttcactttgtcAGGCTGCAAAAAGTAAAGGTGGCAGCAAGC AAAAATGGGATGAAGTGAAGGTTTTACGTAAAGACTTGGCGCACAGAGag caaaatttgatgaaaagtattCTTGTTGATGCTGATGTCATATTATCAAC AACAACCAGTGCTTCCAAAGAAGGTAAGAAATTGCAGATAAATTAATTAA GCTTGGTCATTTTGAAAACATATGTGTTCTAATGTTTACTATTTAcatga aatctatttttgtaAACTAATGATGAAAGAATTTCGTTTTATGGCTTTAA CTCTAGTTAATTTGAGACCAAAACTTTGTCCAGACCAAGTAGACTTGCGT AGATCATACTATGTTGTGGATTTCCTGGCAGGataacaaatttttttatg gttttttaGGTCCATTAAAATTATTGGAGGATGATCATTTTGACTTACTG ATCATTGATGAAGCTGCACAGGCAATGGAAATAAGTTGTTGGATACCAAT GCTTAAAGTAAAGAGGTATTAAAGAACTCAATATGTTTCTCTCATGAATA CAGCTATTAGTCTTCAGTgatcaaagttcttccgtctcagacggatttcc gtctcacagaaatttttgtcaaagttttccgtCTTAGTTAGAAATGGTTA TTTAGCAAGAAATAGTGATTTTATGCTCTAGAAACATTCTAAGTTGtttt aattaacaaattttagtgCCTTTCTAGCCAATCTAGGGGGTAAAAAATCC GAAAATTTTCTTGATCTCGGCCCCAACAATGGTGGGGCCTGCGGGTGTCA CAGTATACGGAAATAtctttatcaagaaattttccgtctcacaaaaaaaa ctgcttttttTCACTAGCCCCCAGACactatcctccacccccatgtacga tcattttttggaagagcccaatcacAGATGGAAATTGACTCACATAGATA ACATTAACATGAGCATAAAGTAGAAAAACAATACACATAATACTTGACTC TAATTTGAAACTAATTGAAATTAAATCCAAGTtcttacaaaatgaaaatt ctatTTGCAAGTGTATCGAttgtattttgtattttattctaACTATATTC TGTTGATACtatgaaaaacttaaaatttttcacCTCTTAAAACCTCTTaa atctttcgtttttaacaGATGTATATTGGCTGGGGATCATTTACAATTGC CACCAACTATTATCAGTGAAAAAGCGGCAAGAGAGGGCTTGGAAGTCACC CTGCTAGAGCGAGTTGTACATGGGCTTGGTCAAAATGCTGTACAAATGTT AACAACACAATATAGGTTTAAATTGTCCAACTCTCATTTTTAACCTTTGT AGTTtacagtgttaaaagttcttcctgTGCAGACAGATTTCTGTCTCAGT GAAGCATATAAAGAGATGCTTTTCTGTCTCATAATCATCcactaaaattt caagaatatgtgctaaatgctgtgtaaaatccattttctgtCTTAGATGA AAAGCCTTGCTTCGACCACTGATTAGTTAGTAGGTTGTTTTGCATTTTTT CCTGAATAATTTTTGTCTAAACTTAATGACTTTGTTACTTTCATAGAATG AATGATTTGGTCATGCGCTGGCCATCAGAAGAATTGTATGAAAACAAACT TGTAGCTGCAGACATGGTTGCAAATCACTTGTTATGTGATCTAGAAGGTG TTACCAAAACTGAAAATACTTCAAACCCATTGGTTTTTGTTGACACTGCA GGTAAAATCTTGATAAATGTTGTTGGCATTTTATGGCGTAACTAACAAAA GATCCTATTTATTAGAAATAACTGTCAGAAATTTCTACAAACTTTTAAAC AACTGCTAAACTCTAACAAATAGTTTGGTAGTTTTGTTGTGAGTGGCTGA TTAATGTCGCAGCATTATCTAactaaatgtttttgaattagagaaagatt cgaattttgagtaatttaaaaCCACTCCAACTATAAGGGAAcaatatttt agtttgtattgtagaaagattcgaataatagaggttcgaattagagagag agttgactgtagttTGGTAGTTTTGGCGTTTGTCATGCACCATTATCTAA CTAATATTTTTTATCTCCTTAAGGTTGTAACATGTACGAACTGGAGGATC AAGAGGAAGATTCAAAAGGGAACACATGGGAAGTGGACATTGTCTATGAA CATATAGTACAATTGGTTGAGGATGGAGTCAATATGCGACAGATTGGTGT CATCACGCCCTATAATCTACaagtattttcttattttttataaaaattat ccATCTACAAAGGCACTAAACTTAAATTTATTCTTCTTTAAATTTCCAAG CCTAactaaattttgccaaaaatgcaTGGTCTTTTGTaagctgcacacat cccctctaaAATGTTTTGATAATAAAGGGTATGCTCATTGTGTATAAACT TCTTGTCTGAGAATTACCCCAAATTCAGCATtccctatatcaaatcatat cagagggaaTGTGTGCAGCCTAggtatttttggacctaccccggtggagg tcctataaattaacctttgtccgtccgtccgtccgtccgttagttaccag cttttctcgagattagctcattagttttttctgattttttgcacaatgat gcaaaatggcaatgcccaaaatgtgacggagcccgattttcggaaaaaaa aatttttgcccaaatttgagccaaaaaacggctaaaaaacgggttttttg gactttgtgaaaaattggatcattaattttttctgattttttgtatgaaa gtagagtaccatcataggtaaaagatgtctcaagcagatttttgcaaaaa aattttgctggctcaaaaaacgcatgtttatctataagaatcactattaa taagcatacatcaatgttcttagtcaaattactcattttgtttatgagat agatgtttttattgctcacgagggcttacttttgaagaatatgtctgttt agacaggaaattttgactgcttagcgtgtttttatagaaaaactggccaa attcgatatttttttataagcacattatcaattacttaggtattagcttt tctcgaggtTGCCGCTTTCaatgtttatgattttttgcacaaagatgcat aactataaaccctcgaatgtgacggagcccgatttttgaaaaaagaattt tttgggcaaatttgggccaaaaaacggctaaaaaacgggttttttggact ttgcgaaaaattggatcattatttttttctgattttttgtatgaaagtag gtaaaagatggctcaagcagatttttgtaaaaaacgaatttttcagctca aataacgcacgtttatctataagaatcactattaataagcatacatcaat gttcttactcaaattactcaattttttttatgagatagatgttttttttt gcttgcttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNgctctcaactttggcaagctat ttttttcaagtcataaaaaaaattattggagtgacaaaggggattcaaaa gtataacCGCAGtttaaattctgcatttcaaagttgaaaaagttgataaa atatgtTACAAACTTGTaaagaaattcgaaaataacttttttgtgcatta ggagtaatgttcaagctctatcaatctttttacctaaataattcaaagaa ataaaattatagtggaatattgtcggatttttcataccaattttggaaaa caggcggcaacgaagctcgcttcaaagagacaataaaagatagatgtcca gtcgtttatatgttcatgcttgaatatgaaagaatatttaaagagcatga aattttggtttctaaacggttttttataagaaacaaacaactaattttaa tagatcgtcactatttgtgttctgaatgattgtttaatggtcacgctcac ttagatatcaattatatatgtgttaaatgcaaatccaggtaggtccataa aagtatcacttgttggacttggtgcaaaattgcttcattagtttttcctg atttttggcagaaagatagtctagcaagctagacgactaattcatacata gtagaaataaagcaaaaagtaatgaagggaacaattttagtcgtctagaa acctttgtgcactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNagtttgttgttgcttgataaatttttttctcgctacgc aagtttctgcgtagctagcccctgtatctataaagctggaacaccggatt cttccagtcgtttatacagactaaatcccgtattattatcattagtattg gtattattagtattacacgcattataaacgactccagtctagcagaaaga tagagtgcaaggtaccctaaaatgtggctgaagtaatttttctcggaaaa ttttttttcgtcgttaaatacggattttcgttttttggggaaattccctt ttaccattttcctgttagcagcttttctcgggattggctcattagttttt tttaattttttgcacaatgatacaaaatagcaatgcctaaaaagtgacgg agcccgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNtgaaaaaaaattttggggggcaaatttgggccaa aaactacctaaaaataaggttttttggactttgtgcaaaattgcttcatt agttttttctgattttttggacaaagatgaagggcaaggttctctaaaaa gtggctgaagcagtttttttcgggaaattttttttggccgtaaaaatcgg attttcttatttgggaaattcccttttgtcatatttagggaaaatgagca tttctcgagattggcgtggtatttttttcttattttttgtatagtggtaa tttgggtagaaaagtgcctaatgtttgttttttttagattttttcgacTA ATTTGAGctctgatactcacggtaatctattcaagctgctcactacactt tcttattcccttgctatttgtcctatttttttctgattttgatcgacagg taggtccattcagcatgttgcttgttccagaaaaaaacttatGATACCCA AAAGCTCTTTCACCAACCTCTGATATTCTACAAAAAAGGATATTCTGGTA TTGCATACCTTTGGGGGAAGTTTTCCTTTTGTAGTACACACTTTTTGTAA GAGACAGTAGATTTAAGGCCAGCCTCTGCTGTtctaatgttcttaaattt tctacATTTGTTTTTGATAGATTGTGCTATTTCACTATTTCATTCCCGAA AGCCTTTAGAATTACCCTAAATTTGATATCTCGGTAATCTTAATTCATTA ATTTATTTTCTTAGCTTGTGGCTAAATTTAAACCTTTTGGCCTTATtatg attgttcttataaaatatcttcaaaagtNAATTTAATTTCTCAGATTTTG GCTAAatttaaaccttttgttcttataaaagtatTGTAAGCGTGTATGAT ATCTTTAGTCATTGTTCATTGTTTCAGGTGGATATGATCCGAAAAAAGGT GCAACCAAAATATCCATCGATTGAAGTCAATTCTGTGGATGGATTTCAGG GACGTGAAAAAGAAGCCATCTTGATTTCACTGGTCCGGTCAAACCAAGAA GGTACAATCACTGACAAAGTGTCAGTTTTTCCACTAGCCTTTGTAAACCC TGGACTAAGCTAGCTATATCAGTTATGTTTAATCGGAGTTTTTCCGAAAG TGATAACCGCAAAGAAGCAATTGTAGTGTTAAAACTTTACCCAATaagcc atttcacagtcgaaatggatcatgggtaatcaggactgattgtaCCTCCA TAACGGCTTCCCATTGGCTAGGCGCAAAATtcttcaacatttttcaaaac caaTAGTAAAAAGTCGTCATTAGTGCGCAGTGNGGCTAGGCGCAAAATtc ttcaacatttttcaaaaccaaTAGTAAAAAGTTGTCATTAGTGCGCAgta gtcctgattacccattacgcttttcgactgtgaaatggcctatacaAAAC AGTGCTACATCACAAACAGTCAtagaaaagtagatctagcttCACCCATA TTGGGAACTAGTACCCTTTAGGGTACCAGTTTCTCAAAAACTCGGaccaa agattttgcttggtgAGGATTGAGAAATGGCCTCCAGGGTTTAAATAAAT CTCTTTTTGTCACAAAATGAAAAGATAAAACCCAAGATGtcgaagcaaaa taatgcggcACCTAAACAAAAAAACTCGGTGCCGGCAAAGTTCATCCTTT TCTTCTCTAAGTGAGAAACGAAGTagacaaaatgaattttttatctTACA TTTATATTAAGACAATTTGAGTAacccttaaaaataaagatgaaaatatt ttcttcttttttctcgtAGGCAAAGTTGGTTTCCTCAAAGAGGACCGACG TATTAACGTAGCTATAACGCGAGCACGTCGTCATTTATTCGTGGTTGGAG ACACGTCAACCATTTCACGTCATCCGTTCCTTGAGTCGTTCTCTAATTTC ATGTTTGAGAAGGCTGTGGTGAGGTCCCCACTTGTAGACCAACAAGATAT AAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037395XLOC_037395Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059405-exon-scaffold_327-1491911889:171202..171469TCONS_00059405-exon-scaffold_327-1491911889:171202..171469Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:171202..171469TCONS_00059405-exon-scaffold_327-1510915933:171202..171469Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:171202..171469TCONS_00059405-exon-scaffold_327-1575043694:171202..171469Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:171784..171967TCONS_00059405-exon-scaffold_327-1491911889:171784..171967Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:171784..171967TCONS_00059405-exon-scaffold_327-1510915933:171784..171967Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:171784..171967TCONS_00059405-exon-scaffold_327-1575043694:171784..171967Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:172389..172662TCONS_00059405-exon-scaffold_327-1491911889:172389..172662Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:172389..172662TCONS_00059405-exon-scaffold_327-1510915933:172389..172662Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:172389..172662TCONS_00059405-exon-scaffold_327-1575043694:172389..172662Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:172870..172941TCONS_00059405-exon-scaffold_327-1491911889:172870..172941Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:172870..172941TCONS_00059405-exon-scaffold_327-1510915933:172870..172941Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:172870..172941TCONS_00059405-exon-scaffold_327-1575043694:172870..172941Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:173585..173713TCONS_00059405-exon-scaffold_327-1491911889:173585..173713Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:173585..173713TCONS_00059405-exon-scaffold_327-1510915933:173585..173713Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:173585..173713TCONS_00059405-exon-scaffold_327-1575043694:173585..173713Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:174024..174174TCONS_00059405-exon-scaffold_327-1491911889:174024..174174Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:174024..174174TCONS_00059405-exon-scaffold_327-1510915933:174024..174174Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:174024..174174TCONS_00059405-exon-scaffold_327-1575043694:174024..174174Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:174411..174516TCONS_00059405-exon-scaffold_327-1491911889:174411..174516Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:174411..174516TCONS_00059405-exon-scaffold_327-1510915933:174411..174516Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:174411..174516TCONS_00059405-exon-scaffold_327-1575043694:174411..174516Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:175170..175316TCONS_00059405-exon-scaffold_327-1491911889:175170..175316Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:175170..175316TCONS_00059405-exon-scaffold_327-1510915933:175170..175316Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:175170..175316TCONS_00059405-exon-scaffold_327-1575043694:175170..175316Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:175598..175752TCONS_00059405-exon-scaffold_327-1491911889:175598..175752Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:175598..175752TCONS_00059405-exon-scaffold_327-1510915933:175598..175752Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:175598..175752TCONS_00059405-exon-scaffold_327-1575043694:175598..175752Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:176125..176273TCONS_00059405-exon-scaffold_327-1491911889:176125..176273Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:176125..176273TCONS_00059405-exon-scaffold_327-1510915933:176125..176273Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:176125..176273TCONS_00059405-exon-scaffold_327-1575043694:176125..176273Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:180279..180402TCONS_00059405-exon-scaffold_327-1491911889:180279..180402Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:180279..180402TCONS_00059405-exon-scaffold_327-1510915933:180279..180402Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:180279..180402TCONS_00059405-exon-scaffold_327-1575043694:180279..180402Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1491911889:181171..181355TCONS_00059405-exon-scaffold_327-1491911889:181171..181355Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1510915933:181171..181355TCONS_00059405-exon-scaffold_327-1510915933:181171..181355Clytia hemisphaericaexon
TCONS_00059405-exon-scaffold_327-1575043694:181171..181355TCONS_00059405-exon-scaffold_327-1575043694:181171..181355Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:171202..181355 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (0.779662 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.203437 0.218005 0.599566 0 0 2.51475e-06 0 0.734927 0 0 0 0 0 0.267906 0.185187 0.186306 0.412384 0 0.0863403 0.271721 0 0.172555 0.186697 0.127531 0.502327 0.779662 0.139632 0.238062 0.0451707 0.229073
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059405 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
20040060080010001200140016001800Expect = 0.00e+0 / Id = 47.21SequenceSMBP2
Match NameE-valueIdentityDescription
SMBP20.000e+047.21DNA-binding protein SMUBP-2 OS=Homo sapiens GN=IGH... [more]
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