TCONS_00059450 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059450
Unique NameTCONS_00059450
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1840

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059450 ID=TCONS_00059450|Name=TCONS_00059450|organism=Clytia hemisphaerica|type=transcript|length=1840bp
GGATGTGAATCAGTACCCTTTGATAAATCAGCAGTCACCAACTCAAGAAA
ACGAAAATCAACAACCAGTAGACTTGGAAATCCACATTGATCTGGACAAG
GACTTATCAAATAGAGATGATGAAAGTGACGTTTTCTTGCCAGAAATCAT
ATCCGAATCGAATCACCCGAAGGAAAAATCGTCCAAAGACGAACGGAATT
GCAATCGAATAGAAGATAGTGATGATGAAGGTGGACATTGTGATGAAATA
CAACAAATACTCAAAATGGACAAAGCTGACATTGGGAATAAAAATGATAT
AGAAAATGCTTCTCGGAGAGCATCaaggaagaataaaaaaatcagcTACG
AAGGCATGGATTCGGACAATGCCTTGGAACCTTTAGGCGATCCTGACTTA
ATACCCTCATTTGAAGATGACGAAGACAAAGATGACAAAAATGAAAGAAG
AGCAAATGAAGCATTGGAAAGAGCAATTGCAAGAATTGATGCTTTGTGTG
CGCCGTTTGAACAATCCTCTCCTGTACGAGAAATCAGTATTTTAAACGAT
TCCGCCATCGGTTTGGGTGACAGTGTTGGTCAGATAATTGACACCGACAA
TGAATCTGACGAAAACGATAATGTCATCTTAGAAATGGAACAGCCGCAAG
AGACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCG
CAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACA
GCCGCAAGAGACAGAACAGCCTAAGACAAAACAGCCGAAAATTCATCGGC
CCTGTCCATACTGTAGCGTGGGGCAGAGCGACTTAACTCGGCATCTAAAG
CTAAAGCACAAGAACGAAACAGCTGTCATTAGTGCAATGAAAAAAGGAAG
GGTTGAACGCAATAAAGCCTTTGACTTACTGAAGAAAGAAGGTATTTTCC
AGCATAACCAAAAGCAAATGGAAAAGGAAAGCCCAACCTTTATGCGGGAA
AGAAAGACAAAGAACGACGAAAAGGTGAAAGTTGAGGTTTTAGTTGTTTG
CGCCGCCTGTCATGGAACCTATTCAAAGACATACAAAGCGAGACATCGAC
TGGAGTGCGGGAACACAAGTGGGCAGGTAATGATCCCAATGATTCCTGCA
AAAGATCTTGTCATCACCCATTATGCGGATGACTTCAAGAAGGTGTTGGA
TAAAATGAAGATAGACGACGTTTCGTCTCTGGCCAAAACCGATCCATATA
TCATGGTGGTTGGAGCAAGAATCTACAACGGAAACAAATGTAAAGACGAG
AAAATACACGAAACTGAAAAACGCGTCCGCTCAGCAATGCGTTTGCTGAG
CCGTTTGTTAATTCAATTCAGAATCTCGTTTGGCGAAGACAAAAACTTAT
CTTTCTTGTACAACAAAAATAATCTCAGTCACTTGCGCTTCGCAATCGAG
GTGCTGTCCGAAGGTGAAGCAGAAATGAAGTCTGGGCTGAAGGTACAGAT
CCAAAACGTGATAAAGCAAGCAGGAAAAATCTTAGAAGCGCATTTTTTAG
TAGAAGGGGAGAGCCAACTTCCCGAAGATGTGTGTGACTTCATCAAGGTT
TTTCATCTTGTTGAAAATGAAATCTTCAACGGAGCCCTctataaaatcaa
acaaaaacgtAATAAATCCACAAGGAAGCCCGCCAATCTTCCTGACGAAG
AGCTGGTGCAAGAACTCAGGAAATACTTACTAAAGACCATgctcaaagaa
aattttatattcaAGTCTCCTGAGGATGTTTTTGTGGAAGTTCGAGACTC
TGCGTGTGCCAGACTGACCATGTTCAATGGGCGTCGAGGT
Run BLAST on NCBI

protein sequence of TCONS_00059450-protein

>TCONS_00059450-protein ID=TCONS_00059450-protein|Name=TCONS_00059450-protein|organism=Clytia hemisphaerica|type=polypeptide|length=613bp
DVNQYPLINQQSPTQENENQQPVDLEIHIDLDKDLSNRDDESDVFLPEII
SESNHPKEKSSKDERNCNRIEDSDDEGGHCDEIQQILKMDKADIGNKNDI
ENASRRASRKNKKISYEGMDSDNALEPLGDPDLIPSFEDDEDKDDKNERR
ANEALERAIARIDALCAPFEQSSPVREISILNDSAIGLGDSVGQIIDTDN
ESDENDNVILEMEQPQETDQPQETDQPQETDQPQETEQPQETEQPQETEQ
PQETEQPKTKQPKIHRPCPYCSVGQSDLTRHLKLKHKNETAVISAMKKGR
VERNKAFDLLKKEGIFQHNQKQMEKESPTFMRERKTKNDEKVKVEVLVVC
AACHGTYSKTYKARHRLECGNTSGQVMIPMIPAKDLVITHYADDFKKVLD
KMKIDDVSSLAKTDPYIMVVGARIYNGNKCKDEKIHETEKRVRSAMRLLS
RLLIQFRISFGEDKNLSFLYNKNNLSHLRFAIEVLSEGEAEMKSGLKVQI
QNVIKQAGKILEAHFLVEGESQLPEDVCDFIKVFHLVENEIFNGALYKIK
QKRNKSTRKPANLPDEELVQELRKYLLKTMLKENFIFKSPEDVFVEVRDS
ACARLTMFNGRRG
Run BLAST on NCBI

transcript from alignment at scaffold_327:456975..462304-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059450 ID=TCONS_00059450|Name=TCONS_00059450|organism=Clytia hemisphaerica|type=transcript|length=5330bp|location=Sequence derived from alignment at scaffold_327:456975..462304- (Clytia hemisphaerica)
GGATGTGAATCAGTACCCTTTGATAAATCAGCAGTCACCAACTCAAGAAA ACGAAAATCAACAACCAGTAGACTTGGAAATCCACATTGATCTGGACAAG GTGACAATGGTTTGTTTTTAACAGTGGTTAATGATAATTGCGGTTTGGTA GTTGATTCAGAGAATTTGACAAATGTCAATCCTTCTTTAACTTATAATTC CCGGACGAGAGGAAATACTTAAATACTTAAATTTTTAGGATTCAAAATGA ATCTAAGTCTATCTTAANCAATCCTTCTTTAACTTATAATTCCCGGACGA GAGGAAATACTTAAATACTTAAATTTTTAGGATTCAAAATGAATCTAAGT CTATCTTAAGACTTAGCTTAAGGCTTAGCCAGCGCACCGCTTTTTGAAAA GTTGATTTATTTTGCAATTTTTTTCTTTGAAATCAAAAAACTTCAAAATG GGCTAAACGCTTGTAGCTTGAGAGTTAGACAATGGTTTTGGTACCATTGA AAAGCAATTTTCATACTCTTTCTAAAAGCATTCGGTTTATGCCCCTTTAA AGCAAGTAGTCAGGAGCTATGACCAAAAGACACTGTATCAGTAAAACGTC CTTTTCAAACCGTATATCTACGTTATCCGCCGTCTAAGGGTTAAGAGAAC TAATTTTCGCGCTTGACACCCACTTTAGGCTAAATTCTTTGATTTTCCTA CCGGGATATTTGAAATTTTAGAAAAAATTACATNAAAACGTCCTTTTCAA ACCGTATATCTACGTTATCCGCCGTCTAAGGGTTAAGAGAACTAATTTTC GCGCTTGACACCCACTTTTGGCAAAATTCTTTGATTTTCCTACCGGGATA TTTGAAATTTTAGAAAAAATTACATTTTGAGGAACCTATATCACTTAAGG AGGCCTAAGGAGGCCTCCAGAGGCCTAATTTTGCATTCATCCATTGTTTG GAAATCCTTTATCGGAGACTATCAAAATTCTCATCTTTCATTCCCCATTT TTTAACATAAACCCAGGATGTCTACTGGACCTCGAAATAATTCTCATCCT TCATTCCCCATATTTTAATATAAACCAGGATGTCTGATGTCTGTCAAACA TTTCAAATCTTGAAATTCCAACACCCTGTAGCGTGTTGTACACATTATAA ATAGACTGGTGTAATATATTTAACTATTTTCCCTTTCAGGACTTATCAAA TAGAGATGATGAAAGTGACGTTTTCTTGCCAGAAATCATATCCGAATCGG TACGTTCCCATTATAAATCGAAAAATTTAGTCAAACCAATCTTCATTGTT GGGAAATTCGTCCATTTAGGAACCAAATCTTTTTCTCACTAAATATCCGC GTGTTCTTATTATAGAACAATGTAATCATGGTTTCAGCCCCCCCCTCTCC CAACGAAAGAGGTCCCCTTGAAAATTTGCCTTGAGCTAGGTACCCCCAGT GACTTGAAATTTCTTTTGAATTCCAAGTTTCTGTTCTTTTGTTATCTCTA AAATCTTCAAGATACTGTACGCTTTTCCAGTGTGAGAAGCGCTCACATGT ATATACCCCTTTAAAAAAACTTTTTATTACGCTATGGAAAACTACGCTTC ATTCAAAACAAAACAAACAAAACAAACAAAAATTTGAGCAGAGTATATGA AAATAGAAAAGTGGAATAAAGAATTTCCTAATTTGGAAAATATAGAGAAA GCCCACTGAGTTTCTATCAGATTAGTCACAGGTACCCCCCATATAATTGC TATACTGTAGCCCCCTCCTAGAGATTGGACCTCGGTCACCTTTAGAAACC TGGGGGGGGGCTGAAACCGTGGTATTGCACCGCAAGAATCGTGTCCATTG AACAACGTTTTCTGGTTATATGGTAGATTATGTCCTCATTTTTTAAGAAT CACCCGAAGGAAAAATCGTCCAAAGACGAACGGAATTGCAATCGAATAGA AGATAGTGATGATGAAGGTGGACATTGTGATGAAATACAACAAATACTCA AAATGGACAAAGCTGACATTGGGAATAAAAGTAAGTAGTCACAATTTTGA TTTGAAAGCTCTGTTCAAAAATCATTTCGCCAAAGTTAGGTAATGATATA TTGAACTTGTAAAAAAAAATCTCTTCTACTATACTAATGGTACTTACAGA ACACTATAATAATATGCCTTTCTGTGTTACAGATGATATAGAAAATGCTT CTCGGAGAGCATCAAGGAAGAATAAAAAAATCAGCTACGAAGGCATGGAT TCGGACAATGCCTTGGAACCTTTAGGCGATCCTGACTTAATACGTAAGCT ACGCAAATTTTACTACCATTGTTATACAGTAATGTTTTCAAAATTAAAGC CGATGTTTTTTAAGGAGTGGTTCGGTTAAAAAATCATTTCTTTCTCAAGT ATCCCCTCGTCGGATTCTCATTTTCAAAAGAGGAACAAAAATATATACAT TTATATAGCAAGTCTTGTTCATTTAAAACAAAGTTTTAAAAATAATAAGA AATGGCTAAAAGAGCTCCAAGCCAAAATAATATTACATCGTNTAAAAATA ATAAGAAATGGCTAAAAGAGCTCCAAGCCAAAATAATATTACATCGTAGA TGTTTGAAAAGTTTAGACTACCCAGTCTACAAGACTCTACTGGGGTTTTA ATGTAAATCACTGTATAAATTGGCTTTTCTTCTAAAACNCGTAGATGTTT GAAAAGTTTAGACTACCCAGTCTACAAGGCTCTACTGGGGTTTTAATGTA AATCACTGTATAAATTGGCTTTTCTTCTAAAATAAGCTTTATTCGCATAA GGCCCTCGTGAAGTCACATACATTAAAGTTGCTCAAAATAGCAGGGTTCT TTCTGTAAAAAATGAGAATCGATTGGCTAAAATAAAATTTGAGAGCACTC GTGTTTTCAGTAGTAAAGTTTAAAAAAAATTAATTGAGTTAGAAACGCTG GACTCCTCATCATAAGATATTAAAAAAAACATTTTTAGCGAACCATTCGT AATGTTGGATTTTTCATCTTTTATCTACCTTAAGGGAGCTAATTTTCGCG GTCCGAACCAAACTGGTTCTTCAGGATTTCCAGAATTTCCCAAAGCTGTG TATTTAATGGCTTAAAAGCTACCAATGTTCAGAATTTAGATAAAAAAACT TTTGAGTGGTGCGGATGTGAAAACTACTTATTAGCGAAGTTTCGCAAGAG GCTATTTAGGATTTGAAATGTACCACTTGAACCTGTACATAACCCGACCG ACCAAAATCTTCATGTGTATAATTCTTAATGTACAGGAAGTCGTACATTT CAAGTCACTAAGGTTGGGCTGAACCCTTTACAGTCTGGTTGCTTATATAA AATGTGTATACTAAAAATGGCGATTTAAAAATATCAGTGGGCGTTACAGG AGAACTTTGCAACAGGGTATCACCATTTTCGAGCTTGCTTCTTATATAAA ATATTTAGTAGATTATTCTAAATCCGTTATAGCCTCATTTGAAGATGACG AAGACAAAGATGACAAAAATGAAAGAAGAGCAAATGAAGCATTGGAAAGA GCAATTGCAAGAATTGATGTAAGTTGAGAATCTCGATTAGTTTTGGGATG GATTCCAGAAAGAACACATTCAATACAACGACCTACAGAGTTTTTTTTGC TGAATATAGCAGTTTAAAAGATTCCGTATGGATTTAATTTCGATCTCAGG TATTTTAGACCCTCTCTCCTCCCCCTTGTTTGCTTGGATAATGTATATGA CGTCATAAAACACTAGCTGTTTGTCTCACCCCCTTGAGCGAATGCTCCCT AAGCAACTTAAAAAAATTCAGCTCATTTCTGTCACAGGGCTTGTGTTGCT CAGCCAACTTGCAAATTATTTTGGTCATCTTCTTCAGGGTCAAACGTCAG TCAATACGGAAAATATTGACCTTATCCTAACGAATATGTAAAATTAGTCA TTACCCAATAATTTTTTTTTTAATTATTAGGCTTTGTGTGCGCCGTTTGA ACAATCCTCTCCTGTACGAGAAATCAGTATTTTAAACGATTCCGCCATCG GTTTGGGTGACAGTGTTGGTCAGATAATTGACACCGACAATGAATCTGAC GAAAACGATAATGTCATCTTAGAAATGGAACAGCCGCAAGAGACAGACCA GCCGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACAG AACAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGAG ACAGAACAGCCTAAGACAAAACAGCCGAAAATTCATCGGCCCTGTCCATA CTGTAGCGTGGGGCAGAGCGACTTAACTCGGCATCTAAAGCTAAAGCACA AGAACGAAACAGCTGTCATTAGTGCAATGAAAAAAGGAAGGGTTGAACGC AATAAAGCCTTTGACTTACTGAAGAAAGAAGGTATTTTCCAGCATAACCA AAAGCAAATGGAAAAGGAAAGCCCAACCTTTATGCGGGAAAGAAAGACAA AGAACGACGAAAAGGTGAAAGTTGAGGTTTTAGTTGTTTGCGCCGCCTGT CATGGAACCTATTCAAAGACATACAAAGCGAGACATCGACTGGAGTGCGG GAACACAAGTGGGCAGGTAATGATCCCAATGATTCCTGCAAAAGATCTTG TCATCACCCATTATGCGGATGACTTCAAGAAGGTGTTGGATAAAATGAAG ATAGACGACGTTTCGTCTCTGGCCAAAACCGATCCATATATCATGGTGGT TGGAGCAAGAATCTACAACGGAAACAAATGTAAAGACGAGAAAATACACG AAACTGAAAAACGCGTCCGCTCAGCAATGCGTTTGCTGAGCCGTTTGTTA ATTCAATTCAGAATCTCGTTTGGCGAAGACAAAAACTTATCTTTCTTGTA CAACAAAAATAATCTCAGTCACTTGCGCTTCGCAATCGAGGTGCTGTCCG AAGGTGAAGCAGAAATGAAGTCTGGGCTGAAGGTACAGATCCAAAACGTG ATAAAGCAAGCAGGAAAAATCTTAGAAGCGCATTTTTTAGTAGAAGGGGA GAGCCAACTTCCCGAAGATGTGTGTGACTTCATCAAGGTTTTTCATCTTG TTGAAAATGAAATCTTCAACGGAGCCCTCTATAAAATCAAACAAAAACGT AATAAATCCACAAGGAAGCCCGCCAATCTTCCTGACGAAGAGCTGGTGCA AGAACTCAGGAAATACTTACTAAAGACCATGCTCAAAGAAAATTTTATAT TCAAGTCTCCTGAGGATGTTTTTGTGGAAGTTCGAGACTCTGCGTGTGCC AGACTGACCATGTTCAATGGGCGTCGAGGT

Coding sequence (CDS) from alignment at scaffold_327:456975..462304-

>TCONS_00059450 ID=TCONS_00059450|Name=TCONS_00059450|organism=Clytia hemisphaerica|type=CDS|length=11034bp|location=Sequence derived from alignment at scaffold_327:456975..462304- (Clytia hemisphaerica)
GCTTTGTGTGCGCCGTTTGAACAATCCTCTCCTGTACGAGAAATCAGTAT
TTTAAACGATTCCGCCATCGGTTTGGGTGACAGTGTTGGTCAGATAATTG
ACACCGACAATGAATCTGACGAAAACGATAATGTCATCTTAGAAATGGAA
CAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGAC
AGACCAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAG
AGACAGAACAGCCGCAAGAGACAGAACAGCCTAAGACAAAACAGCCGAAA
ATTCATCGGCCCTGTCCATACTGTAGCGTGGGGCAGAGCGACTTAACTCG
GCATCTAAAGCTAAAGCACAAGAACGAAACAGCTGTCATTAGTGCAATGA
AAAAAGGAAGGGTTGAACGCAATAAAGCCTTTGACTTACTGAAGAAAGAA
GGTATTTTCCAGCATAACCAAAAGCAAATGGAAAAGGAAAGCCCAACCTT
TATGCGGGAAAGAAAGACAAAGAACGACGAAAAGGTGAAAGTTGAGGTTT
TAGTTGTTTGCGCCGCCTGTCATGGAACCTATTCAAAGACATACAAAGCG
AGACATCGACTGGAGTGCGGGAACACAAGTGGGCAGGTAATGATCCCAAT
GATTCCTGCAAAAGATCTTGTCATCACCCATTATGCGGATGACTTCAAGA
AGGTGTTGGATAAAATGAAGATAGACGACGTTTCGTCTCTGGCCAAAACC
GATCCATATATCATGGTGGTTGGAGCAAGAATCTACAACGGAAACAAATG
TAAAGACGAGAAAATACACGAAACTGAAAAACGCGTCCGCTCAGCAATGC
GTTTGCTGAGCCGTTTGTTAATTCAATTCAGAATCTCGTTTGGCGAAGAC
AAAAACTTATCTTTCTTGTACAACAAAAATAATCTCAGTCACTTGCGCTT
CGCAATCGAGGTGCTGTCCGAAGGTGAAGCAGAAATGAAGTCTGGGCTGA
AGGTACAGATCCAAAACGTGATAAAGCAAGCAGGAAAAATCTTAGAAGCG
CATTTTTTAGTAGAAGGGGAGAGCCAACTTCCCGAAGATGTGTGTGACTT
CATCAAGGTTTTTCATCTTGTTGAAAATGAAATCTTCAACGGAGCCCTCT
ATAAAATCAAACAAAAACGTAATAAATCCACAAGGAAGCCCGCCAATCTT
CCTGACGAAGAGCTGGTGCAAGAACTCAGGAAATACTTACTAAAGACCAT
GCTCAAAGAAAATTTTATATTCAAGTCTCCTGAGGATGTTTTTGTGGAAG
TTCGAGACTCTGCGTGTGCCAGACTGACCATGTTCAATGGGCGTCGAGGT
CCTCATTTGAAGATGACGAAGACAAAGATGACAAAAATGAAAGAAGAGCA
AATGAAGCATTGGAAAGAGCAATTGCAAGAATTGATATGATATAGAAAAT
GCTTCTCGGAGAGCATCAAGGAAGAATAAAAAAATCAGCTACGAAGGCAT
GGATTCGGACAATGCCTTGGAACCTTTAGGCGATCCTGACTTAATACAAT
CACCCGAAGGAAAAATCGTCCAAAGACGAACGGAATTGCAATCGAATAGA
AGATAGTGATGATGAAGGTGGACATTGTGATGAAATACAACAAATACTCA
AAATGGACAAAGCTGACATTGGGAATAAAAGACTTATCAAATAGAGATGA
TGAAAGTGACGTTTTCTTGCCAGAAATCATATCCGAATCGGATGTGAATC
AGTACCCTTTGATAAATCAGCAGTCACCAACTCAAGAAAACGAAAATCAA
CAACCAGTAGACTTGGAAATCCACATTGATCTGGACAAGGCTTTGTGTGC
GCCGTTTGAACAATCCTCTCCTGTACGAGAAATCAGTATTTTAAACGATT
CCGCCATCGGTTTGGGTGACAGTGTTGGTCAGATAATTGACACCGACAAT
GAATCTGACGAAAACGATAATGTCATCTTAGAAATGGAACAGCCGCAAGA
GACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGC
AAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAG
CCGCAAGAGACAGAACAGCCTAAGACAAAACAGCCGAAAATTCATCGGCC
CTGTCCATACTGTAGCGTGGGGCAGAGCGACTTAACTCGGCATCTAAAGC
TAAAGCACAAGAACGAAACAGCTGTCATTAGTGCAATGAAAAAAGGAAGG
GTTGAACGCAATAAAGCCTTTGACTTACTGAAGAAAGAAGGTATTTTCCA
GCATAACCAAAAGCAAATGGAAAAGGAAAGCCCAACCTTTATGCGGGAAA
GAAAGACAAAGAACGACGAAAAGGTGAAAGTTGAGGTTTTAGTTGTTTGC
GCCGCCTGTCATGGAACCTATTCAAAGACATACAAAGCGAGACATCGACT
GGAGTGCGGGAACACAAGTGGGCAGGTAATGATCCCAATGATTCCTGCAA
AAGATCTTGTCATCACCCATTATGCGGATGACTTCAAGAAGGTGTTGGAT
AAAATGAAGATAGACGACGTTTCGTCTCTGGCCAAAACCGATCCATATAT
CATGGTGGTTGGAGCAAGAATCTACAACGGAAACAAATGTAAAGACGAGA
AAATACACGAAACTGAAAAACGCGTCCGCTCAGCAATGCGTTTGCTGAGC
CGTTTGTTAATTCAATTCAGAATCTCGTTTGGCGAAGACAAAAACTTATC
TTTCTTGTACAACAAAAATAATCTCAGTCACTTGCGCTTCGCAATCGAGG
TGCTGTCCGAAGGTGAAGCAGAAATGAAGTCTGGGCTGAAGGTACAGATC
CAAAACGTGATAAAGCAAGCAGGAAAAATCTTAGAAGCGCATTTTTTAGT
AGAAGGGGAGAGCCAACTTCCCGAAGATGTGTGTGACTTCATCAAGGTTT
TTCATCTTGTTGAAAATGAAATCTTCAACGGAGCCCTCTATAAAATCAAA
CAAAAACGTAATAAATCCACAAGGAAGCCCGCCAATCTTCCTGACGAAGA
GCTGGTGCAAGAACTCAGGAAATACTTACTAAAGACCATGCTCAAAGAAA
ATTTTATATTCAAGTCTCCTGAGGATGTTTTTGTGGAAGTTCGAGACTCT
GCGTGTGCCAGACTGACCATGTTCAATGGGCGTCGAGGTCCTCATTTGAA
GATGACGAAGACAAAGATGACAAAAATGAAAGAAGAGCAAATGAAGCATT
GGAAAGAGCAATTGCAAGAATTGATATGATATAGAAAATGCTTCTCGGAG
AGCATCAAGGAAGAATAAAAAAATCAGCTACGAAGGCATGGATTCGGACA
ATGCCTTGGAACCTTTAGGCGATCCTGACTTAATACAATCACCCGAAGGA
AAAATCGTCCAAAGACGAACGGAATTGCAATCGAATAGAAGATAGTGATG
ATGAAGGTGGACATTGTGATGAAATACAACAAATACTCAAAATGGACAAA
GCTGACATTGGGAATAAAAGACTTATCAAATAGAGATGATGAAAGTGACG
TTTTCTTGCCAGAAATCATATCCGAATCGGATGTGAATCAGTACCCTTTG
ATAAATCAGCAGTCACCAACTCAAGAAAACGAAAATCAACAACCAGTAGA
CTTGGAAATCCACATTGATCTGGACAAGGCTTTGTGTGCGCCGTTTGAAC
AATCCTCTCCTGTACGAGAAATCAGTATTTTAAACGATTCCGCCATCGGT
TTGGGTGACAGTGTTGGTCAGATAATTGACACCGACAATGAATCTGACGA
AAACGATAATGTCATCTTAGAAATGGAACAGCCGCAAGAGACAGACCAGC
CGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGAA
CAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGAGAC
AGAACAGCCTAAGACAAAACAGCCGAAAATTCATCGGCCCTGTCCATACT
GTAGCGTGGGGCAGAGCGACTTAACTCGGCATCTAAAGCTAAAGCACAAG
AACGAAACAGCTGTCATTAGTGCAATGAAAAAAGGAAGGGTTGAACGCAA
TAAAGCCTTTGACTTACTGAAGAAAGAAGGTATTTTCCAGCATAACCAAA
AGCAAATGGAAAAGGAAAGCCCAACCTTTATGCGGGAAAGAAAGACAAAG
AACGACGAAAAGGTGAAAGTTGAGGTTTTAGTTGTTTGCGCCGCCTGTCA
TGGAACCTATTCAAAGACATACAAAGCGAGACATCGACTGGAGTGCGGGA
ACACAAGTGGGCAGGTAATGATCCCAATGATTCCTGCAAAAGATCTTGTC
ATCACCCATTATGCGGATGACTTCAAGAAGGTGTTGGATAAAATGAAGAT
AGACGACGTTTCGTCTCTGGCCAAAACCGATCCATATATCATGGTGGTTG
GAGCAAGAATCTACAACGGAAACAAATGTAAAGACGAGAAAATACACGAA
ACTGAAAAACGCGTCCGCTCAGCAATGCGTTTGCTGAGCCGTTTGTTAAT
TCAATTCAGAATCTCGTTTGGCGAAGACAAAAACTTATCTTTCTTGTACA
ACAAAAATAATCTCAGTCACTTGCGCTTCGCAATCGAGGTGCTGTCCGAA
GGTGAAGCAGAAATGAAGTCTGGGCTGAAGGTACAGATCCAAAACGTGAT
AAAGCAAGCAGGAAAAATCTTAGAAGCGCATTTTTTAGTAGAAGGGGAGA
GCCAACTTCCCGAAGATGTGTGTGACTTCATCAAGGTTTTTCATCTTGTT
GAAAATGAAATCTTCAACGGAGCCCTCTATAAAATCAAACAAAAACGTAA
TAAATCCACAAGGAAGCCCGCCAATCTTCCTGACGAAGAGCTGGTGCAAG
AACTCAGGAAATACTTACTAAAGACCATGCTCAAAGAAAATTTTATATTC
AAGTCTCCTGAGGATGTTTTTGTGGAAGTTCGAGACTCTGCGTGTGCCAG
ACTGACCATGTTCAATGGGCGTCGAGGTCCTCATTTGAAGATGACGAAGA
CAAAGATGACAAAAATGAAAGAAGAGCAAATGAAGCATTGGAAAGAGCAA
TTGCAAGAATTGATATGATATAGAAAATGCTTCTCGGAGAGCATCAAGGA
AGAATAAAAAAATCAGCTACGAAGGCATGGATTCGGACAATGCCTTGGAA
CCTTTAGGCGATCCTGACTTAATACAATCACCCGAAGGAAAAATCGTCCA
AAGACGAACGGAATTGCAATCGAATAGAAGATAGTGATGATGAAGGTGGA
CATTGTGATGAAATACAACAAATACTCAAAATGGACAAAGCTGACATTGG
GAATAAAAGACTTATCAAATAGAGATGATGAAAGTGACGTTTTCTTGCCA
GAAATCATATCCGAATCGGATGTGAATCAGTACCCTTTGATAAATCAGCA
GTCACCAACTCAAGAAAACGAAAATCAACAACCAGTAGACTTGGAAATCC
ACATTGATCTGGACAAGGCTTTGTGTGCGCCGTTTGAACAATCCTCTCCT
GTACGAGAAATCAGTATTTTAAACGATTCCGCCATCGGTTTGGGTGACAG
TGTTGGTCAGATAATTGACACCGACAATGAATCTGACGAAAACGATAATG
TCATCTTAGAAATGGAACAGCCGCAAGAGACAGACCAGCCGCAAGAGACA
GACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGAACAGCCGCAAGA
GACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCTA
AGACAAAACAGCCGAAAATTCATCGGCCCTGTCCATACTGTAGCGTGGGG
CAGAGCGACTTAACTCGGCATCTAAAGCTAAAGCACAAGAACGAAACAGC
TGTCATTAGTGCAATGAAAAAAGGAAGGGTTGAACGCAATAAAGCCTTTG
ACTTACTGAAGAAAGAAGGTATTTTCCAGCATAACCAAAAGCAAATGGAA
AAGGAAAGCCCAACCTTTATGCGGGAAAGAAAGACAAAGAACGACGAAAA
GGTGAAAGTTGAGGTTTTAGTTGTTTGCGCCGCCTGTCATGGAACCTATT
CAAAGACATACAAAGCGAGACATCGACTGGAGTGCGGGAACACAAGTGGG
CAGGTAATGATCCCAATGATTCCTGCAAAAGATCTTGTCATCACCCATTA
TGCGGATGACTTCAAGAAGGTGTTGGATAAAATGAAGATAGACGACGTTT
CGTCTCTGGCCAAAACCGATCCATATATCATGGTGGTTGGAGCAAGAATC
TACAACGGAAACAAATGTAAAGACGAGAAAATACACGAAACTGAAAAACG
CGTCCGCTCAGCAATGCGTTTGCTGAGCCGTTTGTTAATTCAATTCAGAA
TCTCGTTTGGCGAAGACAAAAACTTATCTTTCTTGTACAACAAAAATAAT
CTCAGTCACTTGCGCTTCGCAATCGAGGTGCTGTCCGAAGGTGAAGCAGA
AATGAAGTCTGGGCTGAAGGTACAGATCCAAAACGTGATAAAGCAAGCAG
GAAAAATCTTAGAAGCGCATTTTTTAGTAGAAGGGGAGAGCCAACTTCCC
GAAGATGTGTGTGACTTCATCAAGGTTTTTCATCTTGTTGAAAATGAAAT
CTTCAACGGAGCCCTCTATAAAATCAAACAAAAACGTAATAAATCCACAA
GGAAGCCCGCCAATCTTCCTGACGAAGAGCTGGTGCAAGAACTCAGGAAA
TACTTACTAAAGACCATGCTCAAAGAAAATTTTATATTCAAGTCTCCTGA
GGATGTTTTTGTGGAAGTTCGAGACTCTGCGTGTGCCAGACTGACCATGT
TCAATGGGCGTCGAGGTCCTCATTTGAAGATGACGAAGACAAAGATGACA
AAAATGAAAGAAGAGCAAATGAAGCATTGGAAAGAGCAATTGCAAGAATT
GATATGATATAGAAAATGCTTCTCGGAGAGCATCAAGGAAGAATAAAAAA
ATCAGCTACGAAGGCATGGATTCGGACAATGCCTTGGAACCTTTAGGCGA
TCCTGACTTAATACAATCACCCGAAGGAAAAATCGTCCAAAGACGAACGG
AATTGCAATCGAATAGAAGATAGTGATGATGAAGGTGGACATTGTGATGA
AATACAACAAATACTCAAAATGGACAAAGCTGACATTGGGAATAAAAGAC
TTATCAAATAGAGATGATGAAAGTGACGTTTTCTTGCCAGAAATCATATC
CGAATCGGATGTGAATCAGTACCCTTTGATAAATCAGCAGTCACCAACTC
AAGAAAACGAAAATCAACAACCAGTAGACTTGGAAATCCACATTGATCTG
GACAAGGCTTTGTGTGCGCCGTTTGAACAATCCTCTCCTGTACGAGAAAT
CAGTATTTTAAACGATTCCGCCATCGGTTTGGGTGACAGTGTTGGTCAGA
TAATTGACACCGACAATGAATCTGACGAAAACGATAATGTCATCTTAGAA
ATGGAACAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGCA
AGAGACAGACCAGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGC
CGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCTAAGACAAAACAG
CCGAAAATTCATCGGCCCTGTCCATACTGTAGCGTGGGGCAGAGCGACTT
AACTCGGCATCTAAAGCTAAAGCACAAGAACGAAACAGCTGTCATTAGTG
CAATGAAAAAAGGAAGGGTTGAACGCAATAAAGCCTTTGACTTACTGAAG
AAAGAAGGTATTTTCCAGCATAACCAAAAGCAAATGGAAAAGGAAAGCCC
AACCTTTATGCGGGAAAGAAAGACAAAGAACGACGAAAAGGTGAAAGTTG
AGGTTTTAGTTGTTTGCGCCGCCTGTCATGGAACCTATTCAAAGACATAC
AAAGCGAGACATCGACTGGAGTGCGGGAACACAAGTGGGCAGGTAATGAT
CCCAATGATTCCTGCAAAAGATCTTGTCATCACCCATTATGCGGATGACT
TCAAGAAGGTGTTGGATAAAATGAAGATAGACGACGTTTCGTCTCTGGCC
AAAACCGATCCATATATCATGGTGGTTGGAGCAAGAATCTACAACGGAAA
CAAATGTAAAGACGAGAAAATACACGAAACTGAAAAACGCGTCCGCTCAG
CAATGCGTTTGCTGAGCCGTTTGTTAATTCAATTCAGAATCTCGTTTGGC
GAAGACAAAAACTTATCTTTCTTGTACAACAAAAATAATCTCAGTCACTT
GCGCTTCGCAATCGAGGTGCTGTCCGAAGGTGAAGCAGAAATGAAGTCTG
GGCTGAAGGTACAGATCCAAAACGTGATAAAGCAAGCAGGAAAAATCTTA
GAAGCGCATTTTTTAGTAGAAGGGGAGAGCCAACTTCCCGAAGATGTGTG
TGACTTCATCAAGGTTTTTCATCTTGTTGAAAATGAAATCTTCAACGGAG
CCCTCTATAAAATCAAACAAAAACGTAATAAATCCACAAGGAAGCCCGCC
AATCTTCCTGACGAAGAGCTGGTGCAAGAACTCAGGAAATACTTACTAAA
GACCATGCTCAAAGAAAATTTTATATTCAAGTCTCCTGAGGATGTTTTTG
TGGAAGTTCGAGACTCTGCGTGTGCCAGACTGACCATGTTCAATGGGCGT
CGAGGTCCTCATTTGAAGATGACGAAGACAAAGATGACAAAAATGAAAGA
AGAGCAAATGAAGCATTGGAAAGAGCAATTGCAAGAATTGATATGATATA
GAAAATGCTTCTCGGAGAGCATCAAGGAAGAATAAAAAAATCAGCTACGA
AGGCATGGATTCGGACAATGCCTTGGAACCTTTAGGCGATCCTGACTTAA
TACAATCACCCGAAGGAAAAATCGTCCAAAGACGAACGGAATTGCAATCG
AATAGAAGATAGTGATGATGAAGGTGGACATTGTGATGAAATACAACAAA
TACTCAAAATGGACAAAGCTGACATTGGGAATAAAAGACTTATCAAATAG
AGATGATGAAAGTGACGTTTTCTTGCCAGAAATCATATCCGAATCGGATG
TGAATCAGTACCCTTTGATAAATCAGCAGTCACCAACTCAAGAAAACGAA
AATCAACAACCAGTAGACTTGGAAATCCACATTGATCTGGACAAGGCTTT
GTGTGCGCCGTTTGAACAATCCTCTCCTGTACGAGAAATCAGTATTTTAA
ACGATTCCGCCATCGGTTTGGGTGACAGTGTTGGTCAGATAATTGACACC
GACAATGAATCTGACGAAAACGATAATGTCATCTTAGAAATGGAACAGCC
GCAAGAGACAGACCAGCCGCAAGAGACAGACCAGCCGCAAGAGACAGACC
AGCCGCAAGAGACAGAACAGCCGCAAGAGACAGAACAGCCGCAAGAGACA
GAACAGCCGCAAGAGACAGAACAGCCTAAGACAAAACAGCCGAAAATTCA
TCGGCCCTGTCCATACTGTAGCGTGGGGCAGAGCGACTTAACTCGGCATC
TAAAGCTAAAGCACAAGAACGAAACAGCTGTCATTAGTGCAATGAAAAAA
GGAAGGGTTGAACGCAATAAAGCCTTTGACTTACTGAAGAAAGAAGGTAT
TTTCCAGCATAACCAAAAGCAAATGGAAAAGGAAAGCCCAACCTTTATGC
GGGAAAGAAAGACAAAGAACGACGAAAAGGTGAAAGTTGAGGTTTTAGTT
GTTTGCGCCGCCTGTCATGGAACCTATTCAAAGACATACAAAGCGAGACA
TCGACTGGAGTGCGGGAACACAAGTGGGCAGGTAATGATCCCAATGATTC
CTGCAAAAGATCTTGTCATCACCCATTATGCGGATGACTTCAAGAAGGTG
TTGGATAAAATGAAGATAGACGACGTTTCGTCTCTGGCCAAAACCGATCC
ATATATCATGGTGGTTGGAGCAAGAATCTACAACGGAAACAAATGTAAAG
ACGAGAAAATACACGAAACTGAAAAACGCGTCCGCTCAGCAATGCGTTTG
CTGAGCCGTTTGTTAATTCAATTCAGAATCTCGTTTGGCGAAGACAAAAA
CTTATCTTTCTTGTACAACAAAAATAATCTCAGTCACTTGCGCTTCGCAA
TCGAGGTGCTGTCCGAAGGTGAAGCAGAAATGAAGTCTGGGCTGAAGGTA
CAGATCCAAAACGTGATAAAGCAAGCAGGAAAAATCTTAGAAGCGCATTT
TTTAGTAGAAGGGGAGAGCCAACTTCCCGAAGATGTGTGTGACTTCATCA
AGGTTTTTCATCTTGTTGAAAATGAAATCTTCAACGGAGCCCTCTATAAA
ATCAAACAAAAACGTAATAAATCCACAAGGAAGCCCGCCAATCTTCCTGA
CGAAGAGCTGGTGCAAGAACTCAGGAAATACTTACTAAAGACCATGCTCA
AAGAAAATTTTATATTCAAGTCTCCTGAGGATGTTTTTGTGGAAGTTCGA
GACTCTGCGTGTGCCAGACTGACCATGTTCAATGGGCGTCGAGGTCCTCA
TTTGAAGATGACGAAGACAAAGATGACAAAAATGAAAGAAGAGCAAATGA
AGCATTGGAAAGAGCAATTGCAAGAATTGATATGATATAGAAAATGCTTC
TCGGAGAGCATCAAGGAAGAATAAAAAAATCAGCTACGAAGGCATGGATT
CGGACAATGCCTTGGAACCTTTAGGCGATCCTGACTTAATACAATCACCC
GAAGGAAAAATCGTCCAAAGACGAACGGAATTGCAATCGAATAGAAGATA
GTGATGATGAAGGTGGACATTGTGATGAAATACAACAAATACTCAAAATG
GACAAAGCTGACATTGGGAATAAAAGACTTATCAAATAGAGATGATGAAA
GTGACGTTTTCTTGCCAGAAATCATATCCGAATCGGATGTGAATCAGTAC
CCTTTGATAAATCAGCAGTCACCAACTCAAGAAAACGAAAATCAACAACC
AGTAGACTTGGAAATCCACATTGATCTGGACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037418XLOC_037418Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059450-proteinTCONS_00059450-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059450-exon-scaffold_327-1575043694:462205..462304TCONS_00059450-exon-scaffold_327-1575043694:462205..462304Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1575043694:461056..461115TCONS_00059450-exon-scaffold_327-1575043694:461056..461115Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1575043694:460275..460407TCONS_00059450-exon-scaffold_327-1575043694:460275..460407Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1575043694:460012..460122TCONS_00059450-exon-scaffold_327-1575043694:460012..460122Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1575043694:458737..458822TCONS_00059450-exon-scaffold_327-1575043694:458737..458822Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1575043694:456975..458324TCONS_00059450-exon-scaffold_327-1575043694:456975..458324Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1510915933:462205..462304TCONS_00059450-exon-scaffold_327-1510915933:462205..462304Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1510915933:461056..461115TCONS_00059450-exon-scaffold_327-1510915933:461056..461115Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1510915933:460275..460407TCONS_00059450-exon-scaffold_327-1510915933:460275..460407Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1510915933:460012..460122TCONS_00059450-exon-scaffold_327-1510915933:460012..460122Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1510915933:458737..458822TCONS_00059450-exon-scaffold_327-1510915933:458737..458822Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1510915933:456975..458324TCONS_00059450-exon-scaffold_327-1510915933:456975..458324Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1491911889:462205..462304TCONS_00059450-exon-scaffold_327-1491911889:462205..462304Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1491911889:461056..461115TCONS_00059450-exon-scaffold_327-1491911889:461056..461115Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1491911889:460275..460407TCONS_00059450-exon-scaffold_327-1491911889:460275..460407Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1491911889:460012..460122TCONS_00059450-exon-scaffold_327-1491911889:460012..460122Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1491911889:458737..458822TCONS_00059450-exon-scaffold_327-1491911889:458737..458822Clytia hemisphaericaexon
TCONS_00059450-exon-scaffold_327-1491911889:456975..458324TCONS_00059450-exon-scaffold_327-1491911889:456975..458324Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:456975..462304 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (7.41243 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.217521 0.10707 0 0 0 0 0 0.776393 2.52489 1.36555 5.48742 5.25272 4.2532 3.59068 0.407602 0.320284 0.197282 0.0732403 0.275826 0.266162 0 0 0.274346 0 0.377188 7.41243 0 0 0.241432 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059450 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
20040060080010001200140016001800Sequence
Match NameE-valueIdentityDescription
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