TCONS_00059504 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059504
Unique NameTCONS_00059504
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1152

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059504 ID=TCONS_00059504|Name=TCONS_00059504|organism=Clytia hemisphaerica|type=transcript|length=1152bp
cccccactATATATACAGCGTAACCATTTTGTGGTAATATTACAGGAATA
CGTAGTGACGTAACTCTCCCTTTATTGTTTCAGGTACGGTCGATCCAGCA
CCGACAAGTCTTCACGATTCACTTGTGTTCCCTTCAACTGCAAATGATTT
CACTTCAAAATTAGAATACGCTTATTCAAAGAGTGGACAAGACTTGAAAG
CCTTACAAAAAGAAGTAGAAGAAAGACGATCGAAGCTTGTACGTAGTCCA
CTTTATGGTAAAGATCAATCGTGTAAGAATAATAATCGAATCGCTGGACT
TACCAAATTGTTTGATGCATGGGCACACATGGCAAAATTGTtcaacattc
aatattttttgacatATGGATCGTTAATCGGAGCGGAGAGAGATCGTAAC
ATCATCCCCTATGATTTAGACACTGACATTATGATGCCAGAAGATGACGT
GccaaaactccaaaaaatgATAGATGATAATTTCTCAGTCGGTGATAACA
AGATTCATCTTCGAATCCATCCAGAATATAAGACACATTGGCGAAAACGT
ACCAAGATTTNCATCTTCGAATCCATCCAGAATATAAGACACATTGGCGA
AAACGTACCAAAATTTGTTGTAATGGCAAAGTCAGCCGTGGATCAAACAG
TAACACGTGCTGGGATCAATGTGCAGTACCCAATCCTCTAGGTCGTCTCA
TACTTGGCCCAGTACTGCATATAGGAATTACAGGTTACAAGGTGATTAAG
AATCATACCGTTTTGAAAATGACTTGTCATGAAGAATATGGTTTTAAAAC
TGAGTATAATTGGAAAGATTTAGCACCTCGTGATTGTGAATTTCTTGGAC
ATAAGACATACTGTCCAACAAATGCGAATTTGATAAACACGGAAGTCTAT
GGTGAATATTGGACAGATCCCCATAAGAAATGCAAAAATGGAATTTGGAC
TAAAACAAGCAGACCACAAAAGaatttctaactgatattttatTGGAATT
TATTTTTATGATATAATGTGAGCCATCCCCACtggggaatgggtcctact
ccttacgaattaggaattcctcctttttcaagtTGGAACGCTTAGCACGC
AAAACACAGATACCATGATGAATAGTGGTGACACTCGAACTAAAGAATAA
GN
Run BLAST on NCBI

transcript from alignment at scaffold_329:148469..167738+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059504 ID=TCONS_00059504|Name=TCONS_00059504|organism=Clytia hemisphaerica|type=transcript|length=19270bp|location=Sequence derived from alignment at scaffold_329:148469..167738+ (Clytia hemisphaerica)
cccccactATATATACAGCGTAACCATTTTGTGGTAATATTACAGGAATA CGTAGTGACGTAACTCTCCCTTTATTGTTTCAGGTACGGTCGATCCAGCA CCGACAAGTCTTCACGATTCACTTGTGTTCCCTTCAACTGCAAATGATTT CACTTCAAAATTAGAATACGCTTATTCAAAGAGTGGACAAGACTTGAAAG CCTTACAAAAAGAAGTAGAAGAAAGACGATCGAAGCTTGTACGTAGTCCA CTTTATGGTAAAGATCAATCGTGTAAGAATAATAATCGAATCGCTGGACT TACCAAATTGTTTGATGCATGGGCACACATGGCAAAATTGTtcaacattc aatattttttgacatATGGATCGTTAATCGGAGCGGAGAGAGATCGTaag ttcaaaaaatttcttttaaaacctCTTAACCTGGACTGAAAATATTTGGT GCGATATCATGATTTTAAAACCAATCTTCGTTCACTTTTTCATCTTAATT TTTCGATATATCTAACAAAATTAGCAGTTCAGATAATGCCACCCAGATGA AAATACCTTTTCTAAAGGTCTTGCGcccacttgaaaaaaaatttcttcaa tttcctAAACTTTATTGCAAATAGCAAAACTCGTCTCAgagaaatctcaa aaaaccatTTCTGTCACTGTAATAAAAggtaaaaaacattttctgcaact GTTTCTGTCTAAACAGAAActattgattaattttttgaaacattttttgt tttagaaaaaCTATATGCTTTCTTTCCATCATTtgagcgggggggggggg cccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGtca ctacaatcagtgccataatatattggcacttttggctaatttaccatttt tcgaaaattgaagttcgaccgagactgtcaatttttaggccttcaacttg atttcatcgatcatttcgatctgggagggatttattatTTATCGaggtgc caagtattttgtcactgattgtagcaatttttcatcaaagtgaaactttt tgcgtttttcagttttcaaatatttctatttgatgaaaaatgtttcaagt ggCCCCAGACCTTAAAAAGTAAAGTGTCTATCAGTAGAGTAGTGGGTCGA CAAAAATTTGGGTGAACTGGGGAGGCAAATTTGGAATATTATGACTTTGG CACCCCGCCCCCTATGAAATACTTTGGGCTCTGACCatcatagtgaattt ttaatatttgccacgtaaaaaatatgaatttctacttgatgtagcacgCA AAACTGTGGCATATTATACATTTtatgttaggccaattatccttgagtct gaaaatttgaaattgataaacaataaaatgaagatttttacgAAGAAggg tatttcaactttgaagagcttagtttcggcgaagaaaaaacattttgaaa atttttttacggTAGATGGTGTAACCtttaccgaactaaaaatagatttt cggaaaattttctcaaatcttaTTTGTcttaatttggaaaaaatttacga aaaatttaaaacagttcaattctttgcgtaCAGgcaaattctttgttaaa agttttaaagaaactAAAACATGGCTAAAACcaatttttcgactatggtA AGAGCCCTTaagagcagaaacttttgcgggcagaaactttcacgatgtta caaaatcgtgaaattgCACGAacttaactttcgcgaattttactTTTGGA ACGAGTTCTGCGGATATAACTTTTAGAATATCATTTCATTTTGCAGGTAA AAAAGCATAAAATAGCAACAAAAGTGTATCTTTTGCGGAAAAGACTTTGG CGAATTTCTCGTGAAATTTCTTACTTggcagaaattttcgcggaaaagga cgaaaatcacgaaaatttctgcttgcgaaagtttctgcccttaaagtata aATATCTCTGTAAAGGTTACGCGGGTAAAGCAAGCacgaaaattttgggg tattttctctctttttggccgaaaactgccatttctaaggtgtaaaagag aACAGGGCGCCGTAATTAGTAATCAGAGGAGTTCATTTTGGCGACCCCTC AAAATAATCGGCCGCTTGCTTtgggtggggggggggcactgctCCCTGCC ACCACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgcaaaaaatcgagatt ccagtccaatatattgcgtgaagctatgaatgcctccTCAGTCGCTGCGC TCCTTGCGGGGGCAATAATAACTGGCTAAAAGGTCAATGCAGGAAAATAT TGACTGCAGCCGAAGTATTCATGCACCATTGTAATGTAtttcacggaccc aacagccgattggttgcaagtgaggTATTGACTGATTTTGCGTTACTTAC AACCAGTctgttgggtccatgatgtaatgttagagTACATTGCAATTGTG CATATCATGATTAGACCACGAAACAACCAATACTAACAACGCATTTCACC TGTTTTAGACCGCTTACATTATAACCAGTTAATGAAGCTTTGTATATATC AATTATGGCAATATTGTTTTGATGATGACCGCGTTGAGAAAGTTcagacg aaatttttgtcaaagaaaCTTCAAATGAGGCTCTATAGTCTTCAAAATAG TTTGGCTGATATCTTAATGTAATTTCCATTATTACTACAGGTAACATCAT CCCGTATGATTTAGACACTGACATTATGATGCCAGAAGATGACGTGccaa aactccaaaaaatgATAGATGATAATTTCTCAGTCGGTGATAACAAAATC CATCTTCGGATCCATCCAGAATATAAGACACATTGGCGAAAACGTACCAA AATTTGTTGTAATGGCAAAGTCAGCCGTGGATCAAACAGTAACACGTGCT GGGATCAATGTGCAGTACCCAATCCTCTAGGTCGTCTCATACTTGGCCCA GTACTGCATATAGGAATTACAGGTTACAAAGTGATTAAGAATCATACCGT TTTGAAAATGACTTGTCATGAAGAATATGGTTTTAAAACTGAGTATAAGT GGAAAGATTTAGCACCTCGGGATTGTGAATTTCTTGGACATAAGACATAC TGTCCAACAAATGCCAATTTGATAAACACGGAAGTCTATGGTGAATATTG GACAGATCCCCATAAGAAATGCAAAAATGGAATTTGGACTAAAACAAGCA GACCACAAAAGaatttctaactgatattttatTGGAATTTACTTTTATGA AATAATGTGAGCCATCCCCACtggggaatgggtcctactccttacgaagt aggaattcctcctttttcaagtTGGAACGCTTAGCACGCAAAACACAGAT ACCATGATGAATAGTGGTGACACTCGAACTACGCGGGAGAGCATATAGCT CGTCGCAGGCGCAAAacaaaaatatcgataattttcaatatttaaaccaa aatatctcgagatttagacatcgaaagttaacaaaccataccatttttgg atactactaattcagggctatccagttgtgggaatgattttttctaNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNaattctacaccctattaggagcataa tatcaaaaatttgccctgatctaaggggtgccctacgaagtgacacaatc cactgcctcggccgctggtctaagAGCaaaggaatgtaaagagattcgaa aacagcttttctgattactcaaagttcaacgatcacttctattgaaaatt ctattgtaaaaacgttgattaggtcattaaatgaaagtccagaaaaaaCG GCTCGCCAGACAAATCAgactacatgatttgacgataaaaatgaaaattt gtttttccttttttgccgattactagttcaatttttaagaataaggagaa atatttttaccaatgtgaatgaaatgaaattcttaacgcaacgATATTAA ATTGgctcttgtaaaactgtcagaagtcgagtaaaatcaagatgaagtta taattttctcgagctctagctttccatattattgtgcggtcatgatgcgg ttatatcagtagaatcgctaggaaattctgagcaagaagatataggtacc ttttcgtacaggagaggtgtacccaaaatataggcctaaaagtttgcgca taatcaggcttgaaacaaaagaattttgtcacaacacgctaattatgcag atttttcccagatttttatagcgacaacaaaagaaacctatttactcgac ataaactcccttaagggctctgaccatagtccaaaaattgattttggtat ttgaacataaaagttatatttcaggttccttaatacttttaacaaagaat tgcctttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACAA Aaaatttccgcaaaaatttttattgttcggtaaaagatacaccatctact gcgaaaaatttttcaaaatgttttttcttcgccgaaactaagctcgaaac acaactatgagtagaaagttttgtgtgcgtgttcacaaaattgtatttta agctctccctcttttttctttgtcatttcgATTAATtaatacgttgtaac taccttttgtaataagcctgtgtgatggagaacgttcttatattttagcg ataacacacacacaaacttttgtactcaatcgcatgttcaaactcgatac tttaattagggacaccctgtacagtgggaatcgaactcAGACCTCCTAGA CGGGTGTTAAGAGTGATGACCACCAAACCATTACACCTATTTACGAGCAC ACATAACTATCACCTGACTACGGAGAAACGCATCTCCATCTAATCTAGTA GTACACCTGAATGTTTAAGGGCTCTgttcatagtgaaaaatcaatttcag aatttgaagataaaatctTATGTTTTCgtttctttgacatgtttaagaac aaattgcttttgaaaaaatgaatttaagtaattacatcatgagtaattaa ggaataagtgtggcatggaccttaataaaacgtcataacaacGCTATCCA TAtacatttcacaaaaaaagcctaatctccttggggaaatcattttattg tttcaaactttttttaagttaatgacaaataatttctttatttagatttt ttcggaaaaattttctatttggctacatccaaagttatagctgttttcgt atggaaatttagtgggaaaaattgccaaaaataagattttttggagattt taaaggaaaaatacttccacaaaaaatttccgaaattgtattcttagata ctaaatagatacgtcacctgaaccaaaattccaaaatgtttgatttttac cgagattagggctttgaaaggtgaaatactcttcttcgaaaaactcttcg tttttttcttcatttaattttttcatctcaatttttcgatttttaaattc taataaAGTAGGTTcaacaggacatataaaaaaagttatacattaatctt ttcaaaatgcagaaattgccatttaagttggtgtaaaatcgaaaaattgg gtatgtccgGAGGCCTTTAAGAAGTAAAGAGTCGCGACCAAgcagtgttt ggtgtttttggtccaaactatgaacatttctGATGAGGAAAAACGCGCGA CGGAGTAGTGTTTGGTTTGTTTgatcaaaattatgaacATTTCTTATGAG TGAAAAGGCATGACGAagtagtgtttgatgtttttggtCCAAAATATAAA GATTTCTAATGAATAAAAAGACGTGACCAAGTAGTATTTTGTGTTTTCGG TCCAGATTTggaatatttcttatgagtaaaaTGGCGAGACGAAGTAGTGT TTGGTCTTTTTGGTCCAAACTATGGACATTTCTAATGAGAAAAAAGGCGt aaccaagtagtgtttgatgtCTTTGGACCAAGTAAAAAGGCGTGAGCAag tagtgtttgatgttttgggtgcaaattaggaatatttcttggcgtgacca agtagtgtttggtgttttggtcCGAATTATAAACATTTCTTATGAgtgaa aaggcgtgaccaagtagagTTTGGTGTTTTTAGTCCGAATTATGAACCTT CCTAATGAAGAGCGAAATGTGACCAaatagtgtttggtgttttcgTGTGA AAGTATTATCATTCCTGATAAGTAagaaggcgtgaccaagtagtgtttgg tgtttttggtcgaaattataaacatttttaatgactaaAAAGACGTATCA CCAAGTAgtatttgatgtttttgatccaaactatgaacatttctaATAAG AAAAAagacgtgaccaagtagtgtttggtgtttttggacaaaacaatgaa aataaatttcacgagtaaaaaggcgtgaccaaatAGTGCTTCGTGTTTTT GGTCGAATTTATGAATATTTCTAATGAGTAAGAAGGCGTGACGAAGTAGT GTTTTGTGTTTTTAGTCcaaattatgaacttttctaaagaaggaaaaaat gtgaccaagtagtgtttggtgtatTGGAAGCAAATTAGGAAAATTTCTTG TGAGTAAAAAGACGTGACCAAGTAgtatttggtgtttttgtgtGGAAAGT ATGATCATTTCTAATGGGTAAAAacgcgtgaccaagtagtgtttggtgtt ttggtcCAAATAATGAACATTTCTTATGAgtgaaaaggcgtgaccaagta gtatttggtgtttttgtgtGGAAAGTATGATCATTTCTAATGGGTAAAAa cgcgtgaccaagtagtgtttggtgttttggtcCAAATAATGAACATTTCT TATGAgtgaaaaggcgtgaccaagtagtgtttggtgttttcgTGGAAACA TATTAGCACCTATTTTTGAAttaatctgcaaaatctaactttcaagtcat gtgaccaagtaaggataattttttttgactgatctgcaaaatctaacttt caagtcgtgtgaccaagtaaggataaattgttttgactgatctgcaaaat ctaactttcaagtcatgtgacaaagtaaggataaatttttttgactgatc tgcaaaatctaactttcaagtcatgtgaccaagtaaggataatctttttt gactgatctgcaatatctaactttcaagtcatgtgaccatgtaatgaaat ttttttgaataatctgtaaaatctatcTTTTAAATCACgggaccgtgtag tgggaatataaagttttgtgaaagttttaaagaactcttacgcaatgcat ggtgaccaagtaaggataaatttttttgaataatctgtaaaatctaactt ttaaatcacatgaccgtgtagtgagaatataaatttttgcaaaattttta aagaactcttacacaATGCATCGTGACAAAGTAAGgatcaatttttttgc ctgatctgcgaaatctaactttcaagtcatgtgaccaagtaaggataaat tttttgcctgatctgcaaattctaactttcaagtcatgtgaccaagtaag gataaattttttgcctgatctgcaaattctaactttcaagccatgtgacc aagtaaggataaaattttttgcctgatctgcaaaatttaactttcaagtc atgtgaccaagtaaggataattttttttgacagatctgcaaattctaact ttcaagtcatgtgaccaagtaaagataaatttttgcgaaatttttaaaga actcttacacaatgcatcgtgaccaagtaaggataaatttttttgcctga tctgcgaaatctaactttcaactcatgtgaccaagtaaggataaattttt ttgcctcatctgcaaattttaactttcaagttatgtgaccaagtaaggat aaattgttttgactgatctgcaaaatctaactttcaagtcatgtgaccaa gtaaggaaaatttttttgactgatcttcaaattttaactttcaagtcatg tgaccaagtaaggataaatttttttgactgatctgcaaaatctaactttc aagtcatgtgaccaagtaaggataaatttttttgactgatctgcaaaatc taactttcaagtcatgtgaccaagtaaggataaatttttttgacagatct gcaaaatctaactttcaagtcatatgaccaagtaaggataaattttcttG CCTCATCTGCAAattttaactttcaagtcatgtgaccaagtaaggataaa tttttttgactgatctgcaaaatctaactttcaagtcatgtgaccaagta aggaaaatttttttgactcatcttcaaattttaactttcaagtctgtgac caagtaaggataaatttttttgactgatctgcaaaatctaactttaaaGC CATGTGACCaggtaaggataaatttttttgactgatctgcaaaatctaac tttcaagtcatgtgaccaagtaaggataatcttttttgactgatctgcaa tatctaactttcaagtcatgtgaccaagtaaggataaatttttttgcctg atctgcaaaatctaactttcgagtcatgtgaccaagtaaggataagcttt tttgactgatctgcaatatctaactttcaagtcacgtgaccatgtaatga aattttttttgactaatctgtaaaatctatcTTTTAAATCACgggaccgt gtagtgggaatataaatttttgtgaaagttttaaagaactcttacgcaat gcatggtgaccaagtaaggataaatctttttgactgatctgcaaaatcta actttcaagtcatgtgaccaagtaaggataaatttttttgcctgatctgc aaattttaactttcaagtcatgggaccaagtaaggataaaattttttgac tgatctgcaaaatctaactttcaagtcatgttacaaagtaaggataattt tttttgactgatctgcaaaatctaactttcaagtcatgtgaccatgtaat gaaattttttttgactaatctgtaaaatataacttttaaatcacgtgacc gtgtagtgggaatataaatttttgcgaaagttttaaagaactcttacgca atgcatggtgaccaagtaaggataaacttttttgactaatctgtaaaatc taacttttaaatcacgtcaccgtgtagtgagaatataaatttttgcaaaa tttttaaagaactttttaaagaacttatacgcaatgcatcgtgaccaagt aaggataaatctttttgactgatctgcaaaatctaNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaacaattcaaagaaa taaaattacgacggattattgtcggattttttatagcaattttgaaatac aggcggcaacgaagctcgcttcaaagagataataaaagatggatgtccag tcgtttatatgttcatggaccaagtaaggataattttttttgacagatct gcaaattctaactttcaagtcatgtgaccaagtaaggataaatttttaca aaatttttaaagaactcttacacaatgcatcatgaccaagtaaggataaa gttttttgcctgatctgcgaaatctaactttcaagtcatgtgaccaagta aggataaatttttttgcctgatctgcgaaatctaactttcaagtcatgtg accaagtaaggataaatttttttgcctgatctgcgaaatctaactttcaa gtcatgtgaccaagtaaggataaattattttgactgatctgcaaaatcta actttcaagtcatgtgaccaagtaaagaaaatttttttaactgatcttca aattttaactttcaagtcatgtgaccaagtaaggataaatttttttgcct gatctgcaaattttaactttcaagtcatgggaccaagtaaggataaaatt ttttgactgatctgcaaaatctaactttcaagtcatgttacaaagtaagg ataaatttttttgcctgatctgcaaattttaactttcaagtcatgggacc aagtaaggataaaattttttgactgatctgcaaaatctaactttcaagtc atgttacaaagtaaggataaatttttttgactgatctgcaaaatctaact tttaagtcatgtgaccatgtaatgaaattttttttgactaatctgtaaaa tataacttttaaatcacgtgaccgtgtagtgggaatatgaatttttgcga aagatttaaagaactcttacgcaatgcatggtgaccaagtaaggataaac tttttttactaatctgtaaaatctaacttttaaatcacgtcaCCGTGTAG tgagaatttaaatttttgcaaaatttttaaagaactttttaaagaactta tacgcaatgcatcgtgaccaagtaaggataaatctttttgactgatctgc aaaatctaactttcaagttatgtgaccaagtaaggataattttttttgac tgatctgcaaaatctaactttcaagtcatgtgaccatgtgTATAGCATTT GCGCTTGCGTATTATGGTTTCTTCGAGATATttctttagaatttcaatcA CGATTGTTCATCGTGCACTCAATCTTCAAAATATTACATGTATAGTAGTT ATTTGATTAGTCAGTTAAAAAAATGTACTatccataattttcattaaagt gccaccgcagaagaacgatcaaatgtgtccatctcatagatatcttctta tagttatagagataagataaagttacttatctgtttttttgtcacctctt ttattaccaaaataatggtatataatggtttgtttatatcatactaaacg ctacagtactaaactgccattttactgtaatagtcaaacgacaagttttt gaaaggataaaaatttctaatttgcaTTGCTCAGAGCGgctaataactac ttgtggtttaaatagggaaattcccaacaaaaaaggaatttcccttaatt cgactctctgaggtaataaaaaaagacatatacagtagagctttgaaaat gggtaatcagatcaaaacaaatccggaaaagtgtttttaatgatgataaa acaatagaaatacagtcaagctaagaatgttaccggtacaccatttaacc agaactaaaatattgaaaaactattacaacaaaattatgagatgtttgcc caacttccttatgcgtgaagctatgaatgccatcctggCTTCCTGCGGTG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTTCACACCTAACGGTAATTATTTTATGtattctagaa aaatatatctgtcaatcaatcttccatattttattcaaagatatctgtca atcaacttcttAGCCTGCATAATAGCATATGCTACGTCATGTTTTAAATG ATTCACAATAATCTAGTAGAAACCATGTATATTtagctgtttaattttta agcataaattatgacgtagaaaagaaaataacaataggagacgaagtaag gatatgtaacgaagtagtgctatgcacaccCTGCCCAGCAGAACGTCCCC ATGCCCAATTTTGACTAAGTGCCCCCCTCCGGGAAATTAACAAAACATTG GCTATAAAACAACAGTTTAGTAANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgaaatatcatattttttcaa tatatttcagATATTTACACGTTCGAAAGATGGACTTTCAAAGTCcgctt gaaattcattgaaataccattttttatacatatttttactatatttacaa tttgggaaatctatgatttcgcccagtgccagtctatcaaaaagctttaa gtggaccccgggctaatcATGAATACAATCAAGGACATTGATACAATAGA CCACTAAAGAACCAACCAGAACAACGTATTTCAACTGTATTGGACCACTT ACATTAACCAGTTAATAAAGCTTTGTAtggcaattttgttttgatgacga gCCCATGGAGGAAGTCCAGAAAGAATTCTGGACAAAGAAGCTTCAAATAA GGCTCTATAATcgttaaaatcttaaaatatatAGTTTGGTTgatagacag gagacccgttctgtatttttttataatctgatatatacaggacgggtatg acctATGAGGTAGATTTCTGCCACAAAAAATTTatagtgggaaattcgaa tttagcgctgtcctcacttactaaaataaaaaccaaatttagGACCTTGC GCTTTCTCTATGAATGTGACCAGTAACagaataacaaattttgattagct gtgttttcaaccgtcatTTGGATCTAAGAAATTCAAACTCctagcccata ccatgctatgtatttcgccatcagtatataaaataagaaatcatagcatg gatctccaggctaagaTATCTAATATTCTAAATTCCTAAATATAATTTCC ATTATTTCTACAGGTAACATCATCCCCTATGATTTAGACACTGACATTAT GATGCCAGAAGATGACGTGccaaaactccaaaaaatgATAGATGATAATT TCTCAGTCGGTGATAACAAGATTCATCTTCGAATCCATCCAGAATATAAG ACACATTGGCGAAAACGTACCAAGATTTNCATCTTCGAATCCATCCAGAA TATAAGACACATTGGCGAAAACGTACCAAAATTTGTTGTAATGGCAAAGT CAGCCGTGGATCAAACAGTAACACGTGCTGGGATCAATGTGCAGTACCCA ATCCTCTAGGTCGTCTCATACTTGGCCCAGTACTGCATATAGGAATTACA GGTTACAAGGTGATTAAGAATCATACCGTTTTGAAAATGACTTGTCATGA AGAATATGGTTTTAAAACTGAGTATAATTGGAAAGATTTAGCACCTCGTG ATTGTGAATTTCTTGGACATAAGACATACTGTCCAACAAATGCGAATTTG ATAAACACGGAAGTCTATGGTGAATATTGGACAGATCCCCATAAGAAATG CAAAAATGGAATTTGGACTAAAACAAGCAGACCACAAAAGaatttctaac tgatattttatTGGAATTTATTTTTATGATATAATGTGAGCCATCCCCAC tggggaatgggtcctactccttacgaattaggaattcctcctttttcaag tTGGAACGCTTAGCACGCAAAACACAGATACCATGATGAATAGTGGTGAC ACTCGAACTAAAGAATAAGN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037459XLOC_037459Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059504-exon-scaffold_329-1491911889:148469..148863TCONS_00059504-exon-scaffold_329-1491911889:148469..148863Clytia hemisphaericaexon
TCONS_00059504-exon-scaffold_329-1510915933:148469..148863TCONS_00059504-exon-scaffold_329-1510915933:148469..148863Clytia hemisphaericaexon
TCONS_00059504-exon-scaffold_329-1575043694:148469..148863TCONS_00059504-exon-scaffold_329-1575043694:148469..148863Clytia hemisphaericaexon
TCONS_00059504-exon-scaffold_329-1491911889:166982..167738TCONS_00059504-exon-scaffold_329-1491911889:166982..167738Clytia hemisphaericaexon
TCONS_00059504-exon-scaffold_329-1510915933:166982..167738TCONS_00059504-exon-scaffold_329-1510915933:166982..167738Clytia hemisphaericaexon
TCONS_00059504-exon-scaffold_329-1575043694:166982..167738TCONS_00059504-exon-scaffold_329-1575043694:166982..167738Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:148469..167738 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (8.19394 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.239113 0 0 0 0 0 4.40844 3.31311 4.41551 5.84838 3.28145 2.97906 4.62458 5.54946 6.48607 8.19394 4.2447 2.9952 0.648367 0.59598 0.651426 1.80469 3.26199 3.50034 2.19069 1.74496 4.78165 4.04367 2.97559 1.92627
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059504 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
10020030040050060070080090010001100Sequence
Match NameE-valueIdentityDescription
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