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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061214 ID=TCONS_00061214|Name=TCONS_00061214|organism=Clytia hemisphaerica|type=transcript|length=1162bp
AAGGTAAAAGAGACAAAAGTTGGGGGCTAAATTGGGGGCATTTGTCTCAA
TTATCCTGTATTTCAATGCAGCTTTGCTAGACTAAACAAGACAAACCAAA
ACATAATGACATCACAGTGAATTGGTCTAGAAGTTGTNgacccccggatt
gttcatcgcataatttctacgggaaatcgaaagtaatttcattctgCTTG
TGATGTTTCACGGCTGTTTCAGTAAGCCAAAAATCGAACGTCTGGAATCG
AACCAACAcaaaaattgacgaaaatttACCTTACTCATTGATCTGTAGGT
CTAGCTCTGAAGATCATTttaaaattctgtaaaaagccTCTTGAAGCCGA
AAGATAGTTCTTTCCGAATNACATAGGTTCACACAAAATTTTCCTCGCCT
CGAGAAAAATTTCGTACggcttttttcatgttttggtcacgtgatcgaCG
CCTTCCATTTCTCGAAAAACAAGCCAATCAGAGTTGACGATTTTCCCGCG
GCACATTTTGATTGGCCGATTTCAGCGTAACGGGTGGCAACATGGTAGCC
AAAGAAGCGATAATTTCATTCAACTTGCTATTTTGGTGGTGGATGGAGGT
tttgtcaaactttttcaaGTTAAGTGAATCGATctaatttttaaacttca
aaaagctttttagcaatttgattggcttgtttttaaTGTTTCTTTTGGAT
AGAACCAGGGGTTGAGTGACTTCAAATCTCTAAGATAGCCCTTCAAACAA
TCTTACTTCTTCCCAAATATTTTCTAGAATTTCTGTTGCAAATCACCTCA
TCAGCCTCTAATATTCTGACTTGTGGTAATAGATACTAGATTAGAATTTC
ATAGCTGGATTTTGTTTTCCTTcaatatcttttctttcttctgTTTTCTT
CAGGTCTTTGATCTGGGGGATGGAGGGTTCAACAACCAACAACTGACGAC
CGAGAAAGCTAAGTTCGACCAAAAAAGTTACACGAAATGAAAGACTTGAC
CCTGGATTTTAAGGACGACTTGTGCGGTCCTGCAGCAACATGTAAATTTA
TGGCTGGATAGTTGGACTCCTTGACTAATACTGCTCAGCTGCTTGCTGAT
TTCTCCATATCCAAGTGTAGAAGATGGAAATATACCTGTTGTCATGCTGG
AATCGTATCANN Run BLAST on NCBI transcript from alignment at scaffold_354:1068620..1069929- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061214 ID=TCONS_00061214|Name=TCONS_00061214|organism=Clytia hemisphaerica|type=transcript|length=1310bp|location=Sequence derived from alignment at scaffold_354:1068620..1069929- (Clytia hemisphaerica)
AAGGTAAAAGAGACAAAAGTTGGGGGCTAAATTGGGGGCATTTGTCTCAA
TTATCCTGTATTTCAATGCAGCTTTGCTAGACTAAACAAGACAAACCAAA
ACATAATGACATCACAGTGAATTGGTCTAGAAGTTGTNGACCCCCGGATT
GTTCATCGCATAATTTCTACGGGAAATCGAAAGTAATTTCATTCTGCTTG
TGATGTTTCACGGCTGTTTCAGTAAGCCAAAAATCGAACGTCTGGAATCG
AACCAACACAAAAATTGACGAAAATTTACCTTACTCATTGATCTGTAGGT
CTAGCTCTGAAGATCATTTTAAAATTCTGTAAAAAGCCTCTTGAAGCCGA
AAGATAGTTCTTTCCGAATNACATAGGTTCACACAAAATTTTCCTCGCCT
CGAGAAAAATTTCGTACGGCTTTTTTCATGTTTTGGTCACGTGATCGACG
CCTTCCATTTCTCGAAAAACAAGCCAATCAGAGTTGACGATTTTCCCGCG
GCACATTTTGATTGGCCGATTTCAGCGTAACGGGTGGCAACATGGTAGCC
AAAGAAGCGATAATTTCATTCAACTTGCTATTTTGGTGGTGGATGGAGGT
TTTGTCAAACTTTTTCAAGTTAAGTGAATCGATCTAATTTTTAAACTTCA
AAAAGCTTTTTAGCAATTTGATTGGCTTGTTTTTAATGTTTCTTTTGGAT
AGAACCAGGGGTTGAGTGACTTCAAATCTCTAAGATAGCCCTTCAAACAA
TCTTACTTCTTCCCAAATATTTTCTAGAATTTCTGTTGCAAATCACCTCA
TCAGCCTCTAATATTCTGACTTGTGGTAATAGATACTAGATTAGAATTTC
ATAGCTGGATTTTGTTTTCCTTCAATATCTTTTCTTTCTTCTGTTTTCTT
CAGGTCTTTGATCTGGGGGATGGAGGGTTCAACAACCAACAACTGACGAC
CGAGAAAGCTAAGTTCGACCAAAAAAGTTACACGAAATGAAAGACTTGAC
CCTGGATTTTAAGGTAGGACTTATTTGAAATATTCTTAAGAGAATTAAGG
TACTATTAGTTCTTTTCAAGGCTGAGGGAAATGGTGATTGGGTATGAACT
GATGAAAATAGACATAGTTTTTTTGTTGTTTTTTATTTAAAATGTTTTCT
TCATTTTGTAGGACGACTTGTGCGGTCCTGCAGCAACATGTAAATTTATG
GCTGGATAGTTGGACTCCTTGACTAATACTGCTCAGCTGCTTGCTGATTT
CTCCATATCCAAGTGTAGAAGATGGAAATATACCTGTTGTCATGCTGGAA
TCGTATCANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061214-exon-scaffold_354-1575043694:1068917..1069929 | TCONS_00061214-exon-scaffold_354-1575043694:1068917..1069929 | Clytia hemisphaerica | exon |
| TCONS_00061214-exon-scaffold_354-1575043694:1068620..1068768 | TCONS_00061214-exon-scaffold_354-1575043694:1068620..1068768 | Clytia hemisphaerica | exon |
| TCONS_00061214-exon-scaffold_354-1510915933:1068917..1069929 | TCONS_00061214-exon-scaffold_354-1510915933:1068917..1069929 | Clytia hemisphaerica | exon |
| TCONS_00061214-exon-scaffold_354-1510915933:1068620..1068768 | TCONS_00061214-exon-scaffold_354-1510915933:1068620..1068768 | Clytia hemisphaerica | exon |
| TCONS_00061214-exon-scaffold_354-1491911889:1068917..1069929 | TCONS_00061214-exon-scaffold_354-1491911889:1068917..1069929 | Clytia hemisphaerica | exon |
| TCONS_00061214-exon-scaffold_354-1491911889:1068620..1068768 | TCONS_00061214-exon-scaffold_354-1491911889:1068620..1068768 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:1068620..1069929 - |
Blast
The following BLAST results are available for this feature:
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