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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061922 ID=TCONS_00061922|Name=TCONS_00061922|organism=Clytia hemisphaerica|type=transcript|length=1732bp
ATAGGGTAAGGCGTTATAATGCTTTACTCTCTCTTTCTCTCAGACAATtt
cacaaaataacaaaattgaaagaaaacaaaCCACCAAACAGACCAGATGG
AAGGTTTAGaaatTGGATTGTTCGTGGGCGGTATTTTGGTGACACTGACA
ATGATCATCCTAATCATCAaatcaattatgaaattgaaaCGACCAAAAAG
GGCCTGGGAAGAGGACGAATCAAATAACTTTATTGAACAAACACAAAAAT
CATCAGACGAAAAAGACGGTGATGGTAAAGGAAATCGTCCCAAAATCTTC
ATGAGGGAACATCATTTCCACTTACCACTTTCCTATGAAAAGATTCAGAA
CCAGAAACCATGGAAACACAGAGCTGTACCAACCGTCAGTGTTACTCAGC
ACAGTCCCACATCAGCGAGTGCGCCAACAAACCTTTTGCCTTCATCCTCC
GCTGCTAAACATCATGGAGTATTGAATCAACGGAGAAGATCAATCACCAA
CCAAATGATGGCAGACCTTCACAAACACGGCAAACATGTGATGTATTCAT
CTTTCCACAGTGGAGCAGAATCAGGTGGTGATTCGGGAAGTGAATATCAT
TTAGGACCAAATTTCAGCGACGACGGCTCCTTGACCGCTTCAAGCGTTGA
ACATAACTCAGCTGATGATGGAAAAGCACATTATTTAGATTCAAACGTAC
ACGGAATCAAGAAACGTGTTACTCGCACAAGACGTCTCGGACGCAAAACA
CATCACAGTCCTGTTAAACCTTCGTTCAAGAAAACTGGCAAACTTTTCTT
CGAAGCTGAATACATACGACATGAACGAAAACTAGTTCTAAACATTATAA
AATGCTCTGAATTAAAAATGAAGACGGATATACACCACTCCAACACTTTT
GTGAGAGCTTATTTGGTACCCGGCAAAATTCAAAGACAGCAGACAAAAAT
ACGACGGGAAACTTACGAGCCGATTTTCAATGAATCTTTAGTGTTCACCG
ACCTCGATCAAGTTCAATTACAAAGACATAAATTGAGACTGAAAGTATAT
AACCATTCGAAATTGAAGAAACACGATTTGATAGGCGAGGTGGATATTGC
GTTGATTACTCTGAATACTGATGCAAAAGAAACTTTTGATGCTGATCTGT
TCGTCAAAAAGTCTGAGAACGCAAACGCTTCAATGATGATCTCAATAAGA
CACGAAGCAGCTCTTTCCAAACTACAAGTCAATATTGAAGAAGCCAAAAA
TCTTCCAAAGGCTCATCTGACTGGCCTTAACCCTGACCCATACGTGATTG
TGAAGTTATACAAAGGAGATTCGTGCGAAAAGAAAGAAACGTTACACTTA
CGGAACACGCGTGCTCCCAAATTCCACGAAACATTCCAATTCCAACTAGC
AACAGATTTCGAATATCCTTTAAGCGTTTTCTCATTGGTTGTAACTATAG
CAAATAAAGTTCTGATTGGTCGAGACGAAGTATTAGGTCACGTGATTTTT
AGCCTGGATTCGCCTCAACATTCAGCCATCACACACTGGAGGAATGTGCA
AACAGAACCTCATAAAACTCACTCACGATGGCATTCCTTGATTGACCCGG
AAGATGTTTAGTGGCATTTAACTCAGAgagtcaaaatcattttaaatatC
ATCTAGATCTAGAAtctattttctttgtttcaaatGTTAAGTTCAAATGA
ATgttaaaacttttaaagaaaatatttcgaaa Run BLAST on NCBI protein sequence of TCONS_00061922-protein >TCONS_00061922-protein ID=TCONS_00061922-protein|Name=TCONS_00061922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=504bp
MEGLEIGLFVGGILVTLTMIILIIKSIMKLKRPKRAWEEDESNNFIEQTQ
KSSDEKDGDGKGNRPKIFMREHHFHLPLSYEKIQNQKPWKHRAVPTVSVT
QHSPTSASAPTNLLPSSSAAKHHGVLNQRRRSITNQMMADLHKHGKHVMY
SSFHSGAESGGDSGSEYHLGPNFSDDGSLTASSVEHNSADDGKAHYLDSN
VHGIKKRVTRTRRLGRKTHHSPVKPSFKKTGKLFFEAEYIRHERKLVLNI
IKCSELKMKTDIHHSNTFVRAYLVPGKIQRQQTKIRRETYEPIFNESLVF
TDLDQVQLQRHKLRLKVYNHSKLKKHDLIGEVDIALITLNTDAKETFDAD
LFVKKSENANASMMISIRHEAALSKLQVNIEEAKNLPKAHLTGLNPDPYV
IVKLYKGDSCEKKETLHLRNTRAPKFHETFQFQLATDFEYPLSVFSLVVT
IANKVLIGRDEVLGHVIFSLDSPQHSAITHWRNVQTEPHKTHSRWHSLID
PEDV Run BLAST on NCBI transcript from alignment at scaffold_361:1085706..1091283+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061922 ID=TCONS_00061922|Name=TCONS_00061922|organism=Clytia hemisphaerica|type=transcript|length=5578bp|location=Sequence derived from alignment at scaffold_361:1085706..1091283+ (Clytia hemisphaerica)
ATAGGGTAAGGCGTTATAATGCTTTACTCTCTCTTTCTCTCAGACAATtt
cacaaaataacaaaattgaaagaaaacaaaCCACCAAACAGACCAGATGG
AAGGTTTAGGTAAGAATTATCTCATATCAGAGTGCTATCCTGTGACctga
tttatatttttattttgacacaTCCGTCTCCTAGAAGGTTTTTTTCGGCA
AATTTGGAGTCCCACCGTCTCTATATTACAGGAACCTCAGAATGAAGAAG
AACTCTGCCAAATAAAATATACTCAAATAAAGTCCCCTTCTGTGAATTTC
AAACATCctcaataattctttttttattcaagaaatTGGATTGTTCGTGG
GCGGTATTTTGGTGACACTGACAATGATCATCCTAATCATCAaatcaatt
atgaaattgaaaCGACCAAAAAGGGCCTGGGAAGAGGACGAATCAAATAA
CTTTATTGAACAAACACAAAAATCATCAGACGAAAAAGACGGTGATGGTA
AAGGAAATCGTCCCAAAATCTTCATGAGGGAACATCATTTCCACTTACCA
CTTTCCTATGAAAAGATTCAGAACCAGAAACCATGGAAACACAGAGCTGT
ACCAACCGTCAGTGTTACTCAGGTAAGTCCTCTCTGCTTTGACCTGGTAG
TTTGATCAGAGATATCACGTACACCGCGGTACCACCCAGAGACGATAGAT
ACCAATACACGAGTAAAAgtaactacagttgacgctctgtAATTCAACGt
tttactattcgatacgctcgattattcgataatattgaaagacACCGTCa
ataagaaactctcataaatgacGCACTTTTATTCGATACGTTCCATtttt
tcgataatattgaaagacaccgtcaacaagaaactgtcataaacgacgct
ctactattcgatacgctccttattcgatgaaaattctccttaaaaatcga
actaaagagagagagtcaactgtagtcTTTGGTTGATGGCCTTTAGACTA
AATATTCATAGTTGCTTTTTCTCACATACAGCATTCTATAAAAACCTTTG
GCACATTTTAGCACAGTCCCACATCAGCGAGTGCGCCAACAAACCTTTTG
CCTTCATCCTCCGCTGCTAAACATCATGGAGTATTGAATCAACGGAGAAG
ATCAATCACCAACCAAATGATGGCAGACCTTCACAAACACGGCAAACATG
GTATGGTGCAATCCTTTTGATACATCACTGACCATTTTCTCTTTGTCTAT
TAATTGTACGCTTTACAGGTGTAATTTCGCTAAAAATCGAATCGACGCTA
AGTCCTAGCGGATAGGTTGTCCGCTACCAATCCTTTTTGTCTAActcagc
tggcacataacgttgttttaacgtttaaataacgttcacaacgtcatata
acgttaaatgaacgttgaaacaacgttgtgtgccagctgggaaatgTCAT
TGCCCCGGGTCTGTATCacattcataatggcagatatgAGCCGGAATATG
ACCTTTTTTGGATCCGTCGGTAATTAAATCTTAGATCAAAGCTGAAGAAC
CCATTCTATTCGAACCATTCTATTTTCAAGGCAAAAGTCTCCAACCACTC
TTCGGTGGTCACTCTACTTATAAGAGGAAAAAATTTGACCAGGTAATATG
GGGCACCAGGCACCACGTTAGCGTTGAAAAGATTAGAACTGgtttttatt
ctaaaaaatcGCAATGGTTTTCATACTAACTAAGGAACATTTCGAAGAtt
gcttttctttttcgttttccAGTGATGTATTCATCTTTCCACAGTGGAGC
AGAATCAGGTGGTGATTCGGGAAGTGAATATCATTTAGGACCAAATTTCA
GCGACGACGGCTCCTTGACCGCTTCAAGCGTTGAACATAACTCAGCTGAT
GATGGAAAAGCACATTATTTAGATTCAAACGTACACGGAATCAAGAAACG
TGTTACTCGCACAAGACGTCTCGGACGCAAAACACATCACAGTCCTGTTA
AACCTTCGTTCAAGAAAACTGGCAAACTTTTCTTCGAAGCTGAATACATA
CGACATGAACGAAAACTAGTTCTAAACATTATAAAATGCTCTGAATTAAA
AATGAAGACGGATATACACCACTCCAACACTTTTGTGAGAGCTTATTTGG
TACCCGGCAAAATTCAAAGACAGCAGACAAAAATACGACGGGAAACTTAC
GAGCCGATTTTCAATGAATCTTTAGTGTTCACCGACCTCGATCAAGTTCA
ATTACAAAGACATAAATTGAGACTGAAAGTATATAACCATTCGAAATTGA
AGAAACACGATTTGATAGGCGAGGTGGATATTGCGTTGATTAATCTGAAT
ACTGATGCAAAAGAAACTTTTGATGCTGATCTCTTCGTCAAAAAGTCTGA
GGTAAATACATTGCTTTTCAATACTACTGTATCCCTGCAGCGATTTTAGT
AGGAACGTTAGAGTTTATACTAANAAAAGTGTATAACCATTCGAAATTGA
AGAAACACGATTTGATAGGCGAGGTGGATATTGCGTTGATTACTCTGAAT
ACTGATGCAAAAGAAACTTTTGATGCTGATCTGTTCGTCAAAAAGTCTGA
GGTaaatacttttttctgattcaaTACATTGTGTTTCAATACTCCTGTCT
CCCTACAGCGATTTTAGGAAAATTAGAGTTTATACTAAATGCAATATAAA
CATAATATGAGGGTCCCATCCCTGTTTGACAACACAGTGTCTCCTGGGCC
TGggcttttcaaagaaaaaatgtaaactCTAAAGATTGTCTATGCAATTC
AAGGTTTTCTAATCTTTCCCCTTATGAATGGAAATGCACTTAAAGTTGGA
GGGTAGGACTTTTTCTTTACACTGATTAGTTTGTATtttgacaaaaacaa
aagatatgAAGATAATAAATTTGatacgtaatagttatcggacataCCAA
AAGTTTATATTCTATCTTGGTCCTTTCATTTTAGAACGCAAACGCTTCAA
TGATGATCTCAATAAGACACGAAGCAGCTCTTTCCAAACTACAAGTCAAT
ATTGAAGAAGCCAAAAATCTTCCAAAGGCTCATCTGACTGGCCTTAACCC
TGGTAAAGCTTTTTAACTTATTTTGGTTCTTCTTCGATGCCAGTTTCTTC
GAGAATCCGTTTTAGTCCCTTTAAGATTGTTTAAGGAGTGAGGTAGTAGG
TACACGTCATCCTGCAAACCTAGCGACCTGGGCCCCAATGCTACATTATT
TGAACTGCACTCGTTAACAAATTTCCACCTTTCGATTATTGAACTGATAA
ACAACATACGTTCGAGAATCTTTGGAAATAAACAGTGTGTTAGTATGCCA
AGTCAATGTTAGTGGTAGAAAGAGATATTCTCTTTCCCCAGTTGGGCACA
CAacgtagcctatactagacgtcacccgcgtttttttacgcaattaatgt
ctattccactttgcgactttttcgaatgttttgagcctgggttttcgggc
tctaaacattcgattttttgacgtcacttttaactttcgaagctcctgca
gtagcaaaataatcgaatttgcgtcaaataTGCCGGCCATTCTGTAGCAA
TAATCAATCTTTCgaatatttagttcaatccaatccttaatgccgatatt
tagttcaatccaattcccatatttagttcaatctctatatttcattcaat
ccaatccctatatttcattcaatccaatccctatatttcattcaatccaa
tccctatatttcattcaatccaatccctatattttattcaatccaatccc
catatttagttcaatccctgtatttcattcaatccaatcccgatatttta
ttcaatccaatcccgatattttattcaatccaatcccgatattttattca
atccaatcccgatttttcattcaatccaatcccgatatttcattcaatct
tttttttcaatcttttttttaattcaatcttttttcattcaatctttttt
ttattcaatcttttttttaattcaatcttttttttattcaatcttttttt
ttcaatcttttttttttattcaatctttttttttattcaatctttttttt
cattcaatcttcCTGGGTACGAGCGTAATTATTATCTCCCTAATGTAGTT
TCCACATGGTTTGAAGTGATTTAAGACGTAAAAGTTTAGTAGGATCTGAC
TAAAGTATGTTAGGAGATCGCACCAGACTTAGAGCATCCGGTGGTGCTGG
TGCTTCTTCTGTTGTTAGTGAAGAAGCTGGTAGCGGTGTTATTTCTGAAG
ATGATGGAGAACCAATGATTCGTCAGAAGATTTTGACTGCCCTGAAGGAC
AAATTTCCACTTTTAGGGCagaatgactttgattttgTCGAGGTACGACG
TAAAGAGATAACAAAAATGAGCTTGGCAACAGGCATGGAGTATAGTTTCA
ATGTAGTTAAGAAACTTGCCGGTCAAGGACAGCTATATGTGCAAGTCAAA
TCAAATCGTGGAACATTCCTTCATGATGATAACAGTTCTGATGATGAAAA
GGACGAGCTTGCTTTACCACCAGTAGGCTGGAAGCAAAAGAATTGTCCTG
ATCCTTTTGAGCAATTGGGCTCAGATAGGAGTGCTGAAGGTAAATCACAA
AATGCAATTGTTATAAAGGAGGAAAAGGAAAACGATGACACCAATCAAAA
GCACAAAGTGGAACAAGTAGACACCAAAGACAAAGAAGAAGTAAAAATTC
AACTCAGCCTGAATCCTGCTGTTGAAGCCGCCCTAAACGAAATTATTCAA
CAAAAACTTTGTGATCCAACAGAAATCATGCGATTTCTTCAAATGAAATT
GCAAGTAGGTAGGGAACTAGATATAACACATATTGACCTTCCAGATGGCG
GAGGAGAGTTTGGAGACACCAATTACCTTTCTATAGACAGAGATCAAATC
TTACAGTCAACTTTCTCAGAGATGAAAGATNACAACGTTGCTTCGACGTT
TATTCAACGTTcacaacgttagatgaacattgaaacaacgttgtctgTCA
GCTGGTTCTGCATTTAAAGGATATCCTCCAAGAACACCAAGATAGGctta
attgttttctttatatttttcaacattataGACCCATACGTGATTGTGAA
GTTATACAAAGGAGATTCGTGCGAAAAGAAAGAAACGTTACACTTACGGA
ACACGCGTGCTCCCAAATTCCACGAAACATTCCAATTCCAACTAGCAACA
GATTTCGAATATCCTTTAAGCGTTTTCTCATTGGTTGTAACTATAGCAAA
TAAAGTTCTGATTGGTCGAGACGAAGTATTAGGTCACGTGATTTTTAGCC
TGGATTCGCCTCAACATTCAGCCATCACACACTGGAGGAATGTGCAAACA
GAACCTCATAAAACTCACTCACGATGGCATTCCTTGATTGACCCGGAAGA
TGTTTAGTGGCATTTAACTCAGAgagtcaaaatcattttaaatatCATCT
AGATCTAGAAtctattttctttgtttcaaatGTTAAGTTCAAATGAATgt
taaaacttttaaagaaaatatttcgaaa Coding sequence (CDS) from alignment at scaffold_361:1085706..1091283+ >TCONS_00061922 ID=TCONS_00061922|Name=TCONS_00061922|organism=Clytia hemisphaerica|type=CDS|length=10605bp|location=Sequence derived from alignment at scaffold_361:1085706..1091283+ (Clytia hemisphaerica)
ATGGAAGGTTTAGaaatTGGATTGTTCGTGGGCGGTATTTTGGTGACACT
GACAATGATCATCCTAATCATCAaatcaattatgaaattgaaaCGACCAA
AAAGGGCCTGGGAAGAGGACGAATCAAATAACTTTATTGAACAAACACAA
AAATCATCAGACGAAAAAGACGGTGATGGTAAAGGAAATCGTCCCAAAAT
CTTCATGAGGGAACATCATTTCCACTTACCACTTTCCTATGAAAAGATTC
AGAACCAGAAACCATGGAAACACAGAGCTGTACCAACCGTCAGTGTTACT
CAGCACAGTCCCACATCAGCGAGTGCGCCAACAAACCTTTTGCCTTCATC
CTCCGCTGCTAAACATCATGGAGTATTGAATCAACGGAGAAGATCAATCA
CCAACCAAATGATGGCAGACCTTCACAAACACGGCAAACATGTGATGTAT
TCATCTTTCCACAGTGGAGCAGAATCAGGTGGTGATTCGGGAAGTGAATA
TCATTTAGGACCAAATTTCAGCGACGACGGCTCCTTGACCGCTTCAAGCG
TTGAACATAACTCAGCTGATGATGGAAAAGCACATTATTTAGATTCAAAC
GTACACGGAATCAAGAAACGTGTTACTCGCACAAGACGTCTCGGACGCAA
AACACATCACAGTCCTGTTAAACCTTCGTTCAAGAAAACTGGCAAACTTT
TCTTCGAAGCTGAATACATACGACATGAACGAAAACTAGTTCTAAACATT
ATAAAATGCTCTGAATTAAAAATGAAGACGGATATACACCACTCCAACAC
TTTTGTGAGAGCTTATTTGGTACCCGGCAAAATTCAAAGACAGCAGACAA
AAATACGACGGGAAACTTACGAGCCGATTTTCAATGAATCTTTAGTGTTC
ACCGACCTCGATCAAGTTCAATTACAAAGACATAAATTGAGACTGAAAGT
ATATAACCATTCGAAATTGAAGAAACACGATTTGATAGGCGAGGTGGATA
TTGCGTTGATTACTCTGAATACTGATGCAAAAGAAACTTTTGATGCTGAT
CTGTTCGTCAAAAAGTCTGAGAACGCAAACGCTTCAATGATGATCTCAAT
AAGACACGAAGCAGCTCTTTCCAAACTACAAGTCAATATTGAAGAAGCCA
AAAATCTTCCAAAGGCTCATCTGACTGGCCTTAACCCTGACCCATACGTG
ATTGTGAAGTTATACAAAGGAGATTCGTGCGAAAAGAAAGAAACGTTACA
CTTACGGAACACGCGTGCTCCCAAATTCCACGAAACATTCCAATTCCAAC
TAGCAACAGATTTCGAATATCCTTTAAGCGTTTTCTCATTGGTTGTAACT
ATAGCAAATAAAGTTCTGATTGGTCGAGACGAAGTATTAGGTCACGTGAT
TTTTAGCCTGGATTCGCCTCAACATTCAGCCATCACACACTGGAGGAATG
TGCAAACAGAACCTCATAAAACTCACTCACGATGGCATTCCTTGATTGAC
CCGGAAGATGTTTAGATGGAAGGTTTAGaaatTGGATTGTTCGTGGGCGG
TATTTTGGTGACACTGACAATGATCATCCTAATCATCAaatcaattatga
aattgaaaCGACCAAAAAGGGCCTGGGAAGAGGACGAATCAAATAACTTT
ATTGAACAAACACAAAAATCATCAGACGAAAAAGACGGTGATGGTAAAGG
AAATCGTCCCAAAATCTTCATGAGGGAACATCATTTCCACTTACCACTTT
CCTATGAAAAGATTCAGAACCAGAAACCATGGAAACACAGAGCTGTACCA
ACCGTCAGTGTTACTCAGCACAGTCCCACATCAGCGAGTGCGCCAACAAA
CCTTTTGCCTTCATCCTCCGCTGCTAAACATCATGGAGTATTGAATCAAC
GGAGAAGATCAATCACCAACCAAATGATGGCAGACCTTCACAAACACGGC
AAACATGTGATGTATTCATCTTTCCACAGTGGAGCAGAATCAGGTGGTGA
TTCGGGAAGTGAATATCATTTAGGACCAAATTTCAGCGACGACGGCTCCT
TGACCGCTTCAAGCGTTGAACATAACTCAGCTGATGATGGAAAAGCACAT
TATTTAGATTCAAACGTACACGGAATCAAGAAACGTGTTACTCGCACAAG
ACGTCTCGGACGCAAAACACATCACAGTCCTGTTAAACCTTCGTTCAAGA
AAACTGGCAAACTTTTCTTCGAAGCTGAATACATACGACATGAACGAAAA
CTAGTTCTAAACATTATAAAATGCTCTGAATTAAAAATGAAGACGGATAT
ACACCACTCCAACACTTTTGTGAGAGCTTATTTGGTACCCGGCAAAATTC
AAAGACAGCAGACAAAAATACGACGGGAAACTTACGAGCCGATTTTCAAT
GAATCTTTAGTGTTCACCGACCTCGATCAAGTTCAATTACAAAGACATAA
ATTGAGACTGAAAGTATATAACCATTCGAAATTGAAGAAACACGATTTGA
TAGGCGAGGTGGATATTGCGTTGATTACTCTGAATACTGATGCAAAAGAA
ACTTTTGATGCTGATCTGTTCGTCAAAAAGTCTGAGAACGCAAACGCTTC
AATGATGATCTCAATAAGACACGAAGCAGCTCTTTCCAAACTACAAGTCA
ATATTGAAGAAGCCAAAAATCTTCCAAAGGCTCATCTGACTGGCCTTAAC
CCTGACCCATACGTGATTGTGAAGTTATACAAAGGAGATTCGTGCGAAAA
GAAAGAAACGTTACACTTACGGAACACGCGTGCTCCCAAATTCCACGAAA
CATTCCAATTCCAACTAGCAACAGATTTCGAATATCCTTTAAGCGTTTTC
TCATTGGTTGTAACTATAGCAAATAAAGTTCTGATTGGTCGAGACGAAGT
ATTAGGTCACGTGATTTTTAGCCTGGATTCGCCTCAACATTCAGCCATCA
CACACTGGAGGAATGTGCAAACAGAACCTCATAAAACTCACTCACGATGG
CATTCCTTGATTGACCCGGAAGATGTTTAGATGGAAGGTTTAGaaatTGG
ATTGTTCGTGGGCGGTATTTTGGTGACACTGACAATGATCATCCTAATCA
TCAaatcaattatgaaattgaaaCGACCAAAAAGGGCCTGGGAAGAGGAC
GAATCAAATAACTTTATTGAACAAACACAAAAATCATCAGACGAAAAAGA
CGGTGATGGTAAAGGAAATCGTCCCAAAATCTTCATGAGGGAACATCATT
TCCACTTACCACTTTCCTATGAAAAGATTCAGAACCAGAAACCATGGAAA
CACAGAGCTGTACCAACCGTCAGTGTTACTCAGCACAGTCCCACATCAGC
GAGTGCGCCAACAAACCTTTTGCCTTCATCCTCCGCTGCTAAACATCATG
GAGTATTGAATCAACGGAGAAGATCAATCACCAACCAAATGATGGCAGAC
CTTCACAAACACGGCAAACATGTGATGTATTCATCTTTCCACAGTGGAGC
AGAATCAGGTGGTGATTCGGGAAGTGAATATCATTTAGGACCAAATTTCA
GCGACGACGGCTCCTTGACCGCTTCAAGCGTTGAACATAACTCAGCTGAT
GATGGAAAAGCACATTATTTAGATTCAAACGTACACGGAATCAAGAAACG
TGTTACTCGCACAAGACGTCTCGGACGCAAAACACATCACAGTCCTGTTA
AACCTTCGTTCAAGAAAACTGGCAAACTTTTCTTCGAAGCTGAATACATA
CGACATGAACGAAAACTAGTTCTAAACATTATAAAATGCTCTGAATTAAA
AATGAAGACGGATATACACCACTCCAACACTTTTGTGAGAGCTTATTTGG
TACCCGGCAAAATTCAAAGACAGCAGACAAAAATACGACGGGAAACTTAC
GAGCCGATTTTCAATGAATCTTTAGTGTTCACCGACCTCGATCAAGTTCA
ATTACAAAGACATAAATTGAGACTGAAAGTATATAACCATTCGAAATTGA
AGAAACACGATTTGATAGGCGAGGTGGATATTGCGTTGATTACTCTGAAT
ACTGATGCAAAAGAAACTTTTGATGCTGATCTGTTCGTCAAAAAGTCTGA
GAACGCAAACGCTTCAATGATGATCTCAATAAGACACGAAGCAGCTCTTT
CCAAACTACAAGTCAATATTGAAGAAGCCAAAAATCTTCCAAAGGCTCAT
CTGACTGGCCTTAACCCTGACCCATACGTGATTGTGAAGTTATACAAAGG
AGATTCGTGCGAAAAGAAAGAAACGTTACACTTACGGAACACGCGTGCTC
CCAAATTCCACGAAACATTCCAATTCCAACTAGCAACAGATTTCGAATAT
CCTTTAAGCGTTTTCTCATTGGTTGTAACTATAGCAAATAAAGTTCTGAT
TGGTCGAGACGAAGTATTAGGTCACGTGATTTTTAGCCTGGATTCGCCTC
AACATTCAGCCATCACACACTGGAGGAATGTGCAAACAGAACCTCATAAA
ACTCACTCACGATGGCATTCCTTGATTGACCCGGAAGATGTTTAGATGGA
AGGTTTAGaaatTGGATTGTTCGTGGGCGGTATTTTGGTGACACTGACAA
TGATCATCCTAATCATCAaatcaattatgaaattgaaaCGACCAAAAAGG
GCCTGGGAAGAGGACGAATCAAATAACTTTATTGAACAAACACAAAAATC
ATCAGACGAAAAAGACGGTGATGGTAAAGGAAATCGTCCCAAAATCTTCA
TGAGGGAACATCATTTCCACTTACCACTTTCCTATGAAAAGATTCAGAAC
CAGAAACCATGGAAACACAGAGCTGTACCAACCGTCAGTGTTACTCAGCA
CAGTCCCACATCAGCGAGTGCGCCAACAAACCTTTTGCCTTCATCCTCCG
CTGCTAAACATCATGGAGTATTGAATCAACGGAGAAGATCAATCACCAAC
CAAATGATGGCAGACCTTCACAAACACGGCAAACATGTGATGTATTCATC
TTTCCACAGTGGAGCAGAATCAGGTGGTGATTCGGGAAGTGAATATCATT
TAGGACCAAATTTCAGCGACGACGGCTCCTTGACCGCTTCAAGCGTTGAA
CATAACTCAGCTGATGATGGAAAAGCACATTATTTAGATTCAAACGTACA
CGGAATCAAGAAACGTGTTACTCGCACAAGACGTCTCGGACGCAAAACAC
ATCACAGTCCTGTTAAACCTTCGTTCAAGAAAACTGGCAAACTTTTCTTC
GAAGCTGAATACATACGACATGAACGAAAACTAGTTCTAAACATTATAAA
ATGCTCTGAATTAAAAATGAAGACGGATATACACCACTCCAACACTTTTG
TGAGAGCTTATTTGGTACCCGGCAAAATTCAAAGACAGCAGACAAAAATA
CGACGGGAAACTTACGAGCCGATTTTCAATGAATCTTTAGTGTTCACCGA
CCTCGATCAAGTTCAATTACAAAGACATAAATTGAGACTGAAAGTATATA
ACCATTCGAAATTGAAGAAACACGATTTGATAGGCGAGGTGGATATTGCG
TTGATTACTCTGAATACTGATGCAAAAGAAACTTTTGATGCTGATCTGTT
CGTCAAAAAGTCTGAGAACGCAAACGCTTCAATGATGATCTCAATAAGAC
ACGAAGCAGCTCTTTCCAAACTACAAGTCAATATTGAAGAAGCCAAAAAT
CTTCCAAAGGCTCATCTGACTGGCCTTAACCCTGACCCATACGTGATTGT
GAAGTTATACAAAGGAGATTCGTGCGAAAAGAAAGAAACGTTACACTTAC
GGAACACGCGTGCTCCCAAATTCCACGAAACATTCCAATTCCAACTAGCA
ACAGATTTCGAATATCCTTTAAGCGTTTTCTCATTGGTTGTAACTATAGC
AAATAAAGTTCTGATTGGTCGAGACGAAGTATTAGGTCACGTGATTTTTA
GCCTGGATTCGCCTCAACATTCAGCCATCACACACTGGAGGAATGTGCAA
ACAGAACCTCATAAAACTCACTCACGATGGCATTCCTTGATTGACCCGGA
AGATGTTTAGATGGAAGGTTTAGaaatTGGATTGTTCGTGGGCGGTATTT
TGGTGACACTGACAATGATCATCCTAATCATCAaatcaattatgaaattg
aaaCGACCAAAAAGGGCCTGGGAAGAGGACGAATCAAATAACTTTATTGA
ACAAACACAAAAATCATCAGACGAAAAAGACGGTGATGGTAAAGGAAATC
GTCCCAAAATCTTCATGAGGGAACATCATTTCCACTTACCACTTTCCTAT
GAAAAGATTCAGAACCAGAAACCATGGAAACACAGAGCTGTACCAACCGT
CAGTGTTACTCAGCACAGTCCCACATCAGCGAGTGCGCCAACAAACCTTT
TGCCTTCATCCTCCGCTGCTAAACATCATGGAGTATTGAATCAACGGAGA
AGATCAATCACCAACCAAATGATGGCAGACCTTCACAAACACGGCAAACA
TGTGATGTATTCATCTTTCCACAGTGGAGCAGAATCAGGTGGTGATTCGG
GAAGTGAATATCATTTAGGACCAAATTTCAGCGACGACGGCTCCTTGACC
GCTTCAAGCGTTGAACATAACTCAGCTGATGATGGAAAAGCACATTATTT
AGATTCAAACGTACACGGAATCAAGAAACGTGTTACTCGCACAAGACGTC
TCGGACGCAAAACACATCACAGTCCTGTTAAACCTTCGTTCAAGAAAACT
GGCAAACTTTTCTTCGAAGCTGAATACATACGACATGAACGAAAACTAGT
TCTAAACATTATAAAATGCTCTGAATTAAAAATGAAGACGGATATACACC
ACTCCAACACTTTTGTGAGAGCTTATTTGGTACCCGGCAAAATTCAAAGA
CAGCAGACAAAAATACGACGGGAAACTTACGAGCCGATTTTCAATGAATC
TTTAGTGTTCACCGACCTCGATCAAGTTCAATTACAAAGACATAAATTGA
GACTGAAAGTATATAACCATTCGAAATTGAAGAAACACGATTTGATAGGC
GAGGTGGATATTGCGTTGATTACTCTGAATACTGATGCAAAAGAAACTTT
TGATGCTGATCTGTTCGTCAAAAAGTCTGAGAACGCAAACGCTTCAATGA
TGATCTCAATAAGACACGAAGCAGCTCTTTCCAAACTACAAGTCAATATT
GAAGAAGCCAAAAATCTTCCAAAGGCTCATCTGACTGGCCTTAACCCTGA
CCCATACGTGATTGTGAAGTTATACAAAGGAGATTCGTGCGAAAAGAAAG
AAACGTTACACTTACGGAACACGCGTGCTCCCAAATTCCACGAAACATTC
CAATTCCAACTAGCAACAGATTTCGAATATCCTTTAAGCGTTTTCTCATT
GGTTGTAACTATAGCAAATAAAGTTCTGATTGGTCGAGACGAAGTATTAG
GTCACGTGATTTTTAGCCTGGATTCGCCTCAACATTCAGCCATCACACAC
TGGAGGAATGTGCAAACAGAACCTCATAAAACTCACTCACGATGGCATTC
CTTGATTGACCCGGAAGATGTTTAGATGGAAGGTTTAGaaatTGGATTGT
TCGTGGGCGGTATTTTGGTGACACTGACAATGATCATCCTAATCATCAaa
tcaattatgaaattgaaaCGACCAAAAAGGGCCTGGGAAGAGGACGAATC
AAATAACTTTATTGAACAAACACAAAAATCATCAGACGAAAAAGACGGTG
ATGGTAAAGGAAATCGTCCCAAAATCTTCATGAGGGAACATCATTTCCAC
TTACCACTTTCCTATGAAAAGATTCAGAACCAGAAACCATGGAAACACAG
AGCTGTACCAACCGTCAGTGTTACTCAGCACAGTCCCACATCAGCGAGTG
CGCCAACAAACCTTTTGCCTTCATCCTCCGCTGCTAAACATCATGGAGTA
TTGAATCAACGGAGAAGATCAATCACCAACCAAATGATGGCAGACCTTCA
CAAACACGGCAAACATGTGATGTATTCATCTTTCCACAGTGGAGCAGAAT
CAGGTGGTGATTCGGGAAGTGAATATCATTTAGGACCAAATTTCAGCGAC
GACGGCTCCTTGACCGCTTCAAGCGTTGAACATAACTCAGCTGATGATGG
AAAAGCACATTATTTAGATTCAAACGTACACGGAATCAAGAAACGTGTTA
CTCGCACAAGACGTCTCGGACGCAAAACACATCACAGTCCTGTTAAACCT
TCGTTCAAGAAAACTGGCAAACTTTTCTTCGAAGCTGAATACATACGACA
TGAACGAAAACTAGTTCTAAACATTATAAAATGCTCTGAATTAAAAATGA
AGACGGATATACACCACTCCAACACTTTTGTGAGAGCTTATTTGGTACCC
GGCAAAATTCAAAGACAGCAGACAAAAATACGACGGGAAACTTACGAGCC
GATTTTCAATGAATCTTTAGTGTTCACCGACCTCGATCAAGTTCAATTAC
AAAGACATAAATTGAGACTGAAAGTATATAACCATTCGAAATTGAAGAAA
CACGATTTGATAGGCGAGGTGGATATTGCGTTGATTACTCTGAATACTGA
TGCAAAAGAAACTTTTGATGCTGATCTGTTCGTCAAAAAGTCTGAGAACG
CAAACGCTTCAATGATGATCTCAATAAGACACGAAGCAGCTCTTTCCAAA
CTACAAGTCAATATTGAAGAAGCCAAAAATCTTCCAAAGGCTCATCTGAC
TGGCCTTAACCCTGACCCATACGTGATTGTGAAGTTATACAAAGGAGATT
CGTGCGAAAAGAAAGAAACGTTACACTTACGGAACACGCGTGCTCCCAAA
TTCCACGAAACATTCCAATTCCAACTAGCAACAGATTTCGAATATCCTTT
AAGCGTTTTCTCATTGGTTGTAACTATAGCAAATAAAGTTCTGATTGGTC
GAGACGAAGTATTAGGTCACGTGATTTTTAGCCTGGATTCGCCTCAACAT
TCAGCCATCACACACTGGAGGAATGTGCAAACAGAACCTCATAAAACTCA
CTCACGATGGCATTCCTTGATTGACCCGGAAGATGTTTAGATGGAAGGTT
TAGaaatTGGATTGTTCGTGGGCGGTATTTTGGTGACACTGACAATGATC
ATCCTAATCATCAaatcaattatgaaattgaaaCGACCAAAAAGGGCCTG
GGAAGAGGACGAATCAAATAACTTTATTGAACAAACACAAAAATCATCAG
ACGAAAAAGACGGTGATGGTAAAGGAAATCGTCCCAAAATCTTCATGAGG
GAACATCATTTCCACTTACCACTTTCCTATGAAAAGATTCAGAACCAGAA
ACCATGGAAACACAGAGCTGTACCAACCGTCAGTGTTACTCAGCACAGTC
CCACATCAGCGAGTGCGCCAACAAACCTTTTGCCTTCATCCTCCGCTGCT
AAACATCATGGAGTATTGAATCAACGGAGAAGATCAATCACCAACCAAAT
GATGGCAGACCTTCACAAACACGGCAAACATGTGATGTATTCATCTTTCC
ACAGTGGAGCAGAATCAGGTGGTGATTCGGGAAGTGAATATCATTTAGGA
CCAAATTTCAGCGACGACGGCTCCTTGACCGCTTCAAGCGTTGAACATAA
CTCAGCTGATGATGGAAAAGCACATTATTTAGATTCAAACGTACACGGAA
TCAAGAAACGTGTTACTCGCACAAGACGTCTCGGACGCAAAACACATCAC
AGTCCTGTTAAACCTTCGTTCAAGAAAACTGGCAAACTTTTCTTCGAAGC
TGAATACATACGACATGAACGAAAACTAGTTCTAAACATTATAAAATGCT
CTGAATTAAAAATGAAGACGGATATACACCACTCCAACACTTTTGTGAGA
GCTTATTTGGTACCCGGCAAAATTCAAAGACAGCAGACAAAAATACGACG
GGAAACTTACGAGCCGATTTTCAATGAATCTTTAGTGTTCACCGACCTCG
ATCAAGTTCAATTACAAAGACATAAATTGAGACTGAAAGTATATAACCAT
TCGAAATTGAAGAAACACGATTTGATAGGCGAGGTGGATATTGCGTTGAT
TACTCTGAATACTGATGCAAAAGAAACTTTTGATGCTGATCTGTTCGTCA
AAAAGTCTGAGAACGCAAACGCTTCAATGATGATCTCAATAAGACACGAA
GCAGCTCTTTCCAAACTACAAGTCAATATTGAAGAAGCCAAAAATCTTCC
AAAGGCTCATCTGACTGGCCTTAACCCTGACCCATACGTGATTGTGAAGT
TATACAAAGGAGATTCGTGCGAAAAGAAAGAAACGTTACACTTACGGAAC
ACGCGTGCTCCCAAATTCCACGAAACATTCCAATTCCAACTAGCAACAGA
TTTCGAATATCCTTTAAGCGTTTTCTCATTGGTTGTAACTATAGCAAATA
AAGTTCTGATTGGTCGAGACGAAGTATTAGGTCACGTGATTTTTAGCCTG
GATTCGCCTCAACATTCAGCCATCACACACTGGAGGAATGTGCAAACAGA
ACCTCATAAAACTCACTCACGATGGCATTCCTTGATTGACCCGGAAGATG
TTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061922-exon-scaffold_361-1491911889:1085706..1085814 | TCONS_00061922-exon-scaffold_361-1491911889:1085706..1085814 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1510915933:1085706..1085814 | TCONS_00061922-exon-scaffold_361-1510915933:1085706..1085814 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1575043694:1085706..1085814 | TCONS_00061922-exon-scaffold_361-1575043694:1085706..1085814 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1491911889:1086038..1086327 | TCONS_00061922-exon-scaffold_361-1491911889:1086038..1086327 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1510915933:1086038..1086327 | TCONS_00061922-exon-scaffold_361-1510915933:1086038..1086327 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1575043694:1086038..1086327 | TCONS_00061922-exon-scaffold_361-1575043694:1086038..1086327 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1491911889:1086767..1086905 | TCONS_00061922-exon-scaffold_361-1491911889:1086767..1086905 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1510915933:1086767..1086905 | TCONS_00061922-exon-scaffold_361-1510915933:1086767..1086905 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1575043694:1086767..1086905 | TCONS_00061922-exon-scaffold_361-1575043694:1086767..1086905 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1491911889:1087478..1088023 | TCONS_00061922-exon-scaffold_361-1491911889:1087478..1088023 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1510915933:1087478..1088023 | TCONS_00061922-exon-scaffold_361-1510915933:1087478..1088023 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1575043694:1087478..1088023 | TCONS_00061922-exon-scaffold_361-1575043694:1087478..1088023 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1491911889:1088224..1088306 | TCONS_00061922-exon-scaffold_361-1491911889:1088224..1088306 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1510915933:1088224..1088306 | TCONS_00061922-exon-scaffold_361-1510915933:1088224..1088306 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1575043694:1088224..1088306 | TCONS_00061922-exon-scaffold_361-1575043694:1088224..1088306 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1491911889:1088690..1088807 | TCONS_00061922-exon-scaffold_361-1491911889:1088690..1088807 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1510915933:1088690..1088807 | TCONS_00061922-exon-scaffold_361-1510915933:1088690..1088807 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1575043694:1088690..1088807 | TCONS_00061922-exon-scaffold_361-1575043694:1088690..1088807 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1491911889:1090837..1091283 | TCONS_00061922-exon-scaffold_361-1491911889:1090837..1091283 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1510915933:1090837..1091283 | TCONS_00061922-exon-scaffold_361-1510915933:1090837..1091283 | Clytia hemisphaerica | exon |
| TCONS_00061922-exon-scaffold_361-1575043694:1090837..1091283 | TCONS_00061922-exon-scaffold_361-1575043694:1090837..1091283 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:1085706..1091283 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000008 | C2_dom |
Blast
BLAST of TCONS_00061922 vs. Swiss-Prot (Human)
Match: SYT7 (Synaptotagmin-7 OS=Homo sapiens GN=SYT7 PE=1 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 1.511e-32 Identity = 80/270 (29.63%), Postives = 144/270 (53.33%), Query Frame = 1
Query: 787 GKLFFEAEYIRHERKLVLNIIKCSELKMKTDIHHSNTFVRAYLVPGKIQRQQTKIRRETYEPIFNESLVFTDLDQVQLQRHKLRLKVYNHSKLKKHDLIGEVDIALITLNTDAKETFDADL-FVKKSENANASMMISIRHEAALSKLQVNIEEAKNLPKAHLTGLNPDPYVIVKL-YKGDSCEKKETLHLRNTRAPKFHETFQFQLATDFEYPLSVFSLVVTIANKVLIGRDEVLGHVIFSLDSPQHSAITHWRNVQTEPHKTHSRWHSL 1590
G++ F Y E L + I+K EL K S+ FV+ YL+P K + +TK++R+ P +NE+ +F ++ + L L+V ++ + ++D IGEV I L ++ +TF DL + +++S+ + + + + VNI +A+NL KA G DPYV V L YK EKK+T+ ++ P F+E+F F + T+ L ++++T+ +K + R++V+G + S S + HW+++ P + ++WH L
Sbjct: 137 GRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPCSDGSGSRGELLLSLCYNPSANSIIVNIIKARNL-KAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTMKRNLNPIFNESFAFDIPTE---KLRETTIIITVMDKDKLSRNDVIGKIYLSWKS-GPGEVKHWKDMIARPRQPVAQWHQL 401
The following BLAST results are available for this feature:
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