TCONS_00059604 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059604
Unique NameTCONS_00059604
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2563

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059604 ID=TCONS_00059604|Name=TCONS_00059604|organism=Clytia hemisphaerica|type=transcript|length=2563bp
atgataaataaaaacaaattatagAAATCAACATAAAAAAACGAAAGCAA
AAATGATAGGAGAATCGTTGGGAAGCATCAACAAGAAAATTTACCAGTCC
ATTAAGAATGCCAGAAAAATGTTGGATGTCTCCATCAAAGTTGCTAATAA
AAGATTTGATGAATCCATCAATGATGCTAAGATGAAATTCGAAGAGTCGA
TCGCCAGTTCCAAACATATACTGGAAACGTCAGTGAATATTGCCAAACAG
GCTTTGGAAGAGTCCATAAACGAAGCAAAACTACATCTAGTGGAGAAATC
GGATCAAAATTCTTTATCTGATACaatcaaagaagaaattattgatgacG
AAACAACTTCGGAATGTACGGTTGATTGCGCAATACGACTGATTGATTAC
GATTCTTCAGATTCTGAGAACATTGATGATTTACAATCCCAACAAACGCC
AATGGACACTGAAGAACGATCTTCAAAGAAGACGAGTAAAAGTAAACCTA
AAAATAAAGACGACCTTTTGAACTTGAACGTTGATTCTAAATCAGGCCAA
CAGACTGCAAAAGAGACTACTAAAGGACCGAGAGGTTCTACAAAGAAGGC
AATTGCGAGTATACAGAAAGATAGTGATATTAACAATTCCCACTTAAATG
TAGATTCTGTGTGCTGCCAACAGACCATAGACATGACCGACCAAACGGaa
aatgaaatatctttatCTGATCAAAGTGCAACACCCACTTCGAAAGATCT
ATCGAAAAAGCTTACAAAAACTAATTCGAAGGCTTCTAATGATACCTTTT
CTCCTCCAAATCATTTACCGAACTCAGatgccaatccacaagaaggcAAA
GTAAGAACTCATTTCACTGGCCAACAGTCGAATGGCGTGGTCAGGCATGA
AATAGCAAATGATAGCAATGAAAGTACAAGAAATATTCATCGGGCatcaa
atgaatttttttcggcaTCATTTTGTCCTCCATACCAAACACATCAACAT
CATGGGAACCATCGTTTTCATGGACCTTTCAACGCTAGAGCTGGCTTACC
AAATAATGGTTTCCGAATGATGAGGTGGATACCAAGTGACAATCATATGC
GTATACATTCACCACGCATAATCAATCATTACTCAGAAGATGGTCTATTA
CCTGCACCAGGTGAAGAGCTATATCCTGATGATGGTCTATTACCTCATCC
TTCCCCGGGATGGGGTTTACTTCCTCAACcccaatttttgttaagagCAC
ATCCTCCAATGAGGTTGTTTCATCCACCACAAACAGTTTTAAACTCGAAT
GTTAGTAACGGCAGAGATTTGCCAAGTGTTCACGATAATTCTGTTATGGA
ACAAGAGTACATTGGCAGTTGCGTTCAAAGTCCTGAGAATCACACTGGGC
CTATTGTTGAAGCTTTAATAAATGAAACTTCTTCCGTTGAAGTTCGTGGT
GAACCGTCCAATAATGCATTACGACAAGAAGAACATTTATCCGGCATGGG
ACATACTAAAGGGAATGCACAGAAACAGAACGTCACTCAACAACAAGGAG
CTACAAAGAAATTTAAAAGGTATAGGCATGATACACGGAAGATCAAAAAA
TTGTTGACAAATGCAAAGgaacaaaaaaagattgaaaaagaattaagaAA
AGCATTAGAAATAGCAACATCAATGAACAAAGAAAGTGGATCCTAAATAT
TATTAAATCGGATCAAATTATCAGTTGGCACTGACATtgattgtttactt
gctttgtTATATGATGATCGTGAAAATAATTTTGCTCATAATTATCTTGA
TGATGGGAACTAACTTTTGCAGAAACTAACTTTGATGGTGCAACGGTAcg
atcaaacttttttttgtgaCTGACActcaaattttatgaaaattgtacTT
TTGCAAAACTAGTCCGTATAAGAAAGTGAACACGAAATTTAGTTCCCACA
AAATTGAATTAGTTCCTGTGAAAAATTAGCAAGATACATTTGGAAATCAT
ACCTGACACCCTGGTCTTGAGGAAGTTTATTTACAAAACTAAACGAAAAA
AGTTAAGGAAAAAATTATTCGATTGATTTGAAGAATATATAAATGGATAC
GTTATGGGTGGAAAATCGAAATTATCAACGAACAGATTCACGACTGCAAA
AAAAAGCAAGGCAAATGTTGGCTGTATCCATCGAAGATGCTAACGAAATG
TTTGAAGAATCAATCACTGATGCCATAGAATGAAATTCGAGGATTCTATT
CAATTGTTCAAAACATAAACTTGATACATCCGTAGAAATTGCTAAACAAG
CCGTCACGTCAGATGATGATTTGGACACAGATTTATCCCTGACTGGGAAT
GAACATCCTTTTGATTCTACTGGCGAAGACAGAGCGAGTGCTCACGTCGA
TCAATATAATGCAATGAACAGTGTGAAATTtgtagtaaatatttttcaca
gaaaattctttttaaacAGCATCTCAATATTCATAAAGGCATTAAACCAT
TCCATTGTAAAGTTTGTGATATTAGATTTACTCAAAGAACTGCTATGGTT
AAGCACTTAAAGA
Run BLAST on NCBI

protein sequence of TCONS_00059604-protein

>TCONS_00059604-protein ID=TCONS_00059604-protein|Name=TCONS_00059604-protein|organism=Clytia hemisphaerica|type=polypeptide|length=547bp
MIGESLGSINKKIYQSIKNARKMLDVSIKVANKRFDESINDAKMKFEESI
ASSKHILETSVNIAKQALEESINEAKLHLVEKSDQNSLSDTIKEEIIDDE
TTSECTVDCAIRLIDYDSSDSENIDDLQSQQTPMDTEERSSKKTSKSKPK
NKDDLLNLNVDSKSGQQTAKETTKGPRGSTKKAIASIQKDSDINNSHLNV
DSVCCQQTIDMTDQTENEISLSDQSATPTSKDLSKKLTKTNSKASNDTFS
PPNHLPNSDANPQEGKVRTHFTGQQSNGVVRHEIANDSNESTRNIHRASN
EFFSASFCPPYQTHQHHGNHRFHGPFNARAGLPNNGFRMMRWIPSDNHMR
IHSPRIINHYSEDGLLPAPGEELYPDDGLLPHPSPGWGLLPQPQFLLRAH
PPMRLFHPPQTVLNSNVSNGRDLPSVHDNSVMEQEYIGSCVQSPENHTGP
IVEALINETSSVEVRGEPSNNALRQEEHLSGMGHTKGNAQKQNVTQQQGA
TKKFKRYRHDTRKIKKLLTNAKEQKKIEKELRKALEIATSMNKESGS
Run BLAST on NCBI

transcript from alignment at scaffold_329:629203..635327-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059604 ID=TCONS_00059604|Name=TCONS_00059604|organism=Clytia hemisphaerica|type=transcript|length=6125bp|location=Sequence derived from alignment at scaffold_329:629203..635327- (Clytia hemisphaerica)
ATGATAAATAAAAACAAATTATAGAAATCAACATAAAAAAACGAAAGCAA AAATGATAGGAGAATCGTTGGGAAGCATCAACAAGAAAATTTACCAGTCC ATTAAGAATGCCAGAAAAATGTTGGATGTCTCCATCAAAGTTGCTAATAA AAGATTTGATGAATCCATCAATGATGCTAAGATGAAATTCGAAGAGTCGA TCGCCAGTTCCAAACATATACTGGAAACGTCAGTGAATATTGCCAAACAG GCTTTGGAAGAGTCCATAAACGAAGCAAAACTACATCTAGTGGAGAAATC GGATCAAAATTCTTTATCTGATACAATCAAAGAAGAAATTATTGATGACG AAACAACTTCGGAATGTACGGTTGATTGCGCAATACGACTGATTGATTAC GATTCTTCAGATTCTGAGAACATTGATGATTTACAATCCCAACAAACGCC AATGGACACTGAAGAACGATCTTCAAAGAAGACGAGTAAAAGTAAACCTA AAAATAAAGACGACCTTTTGAACTTGAACGTTGATTCTAAATCAGGCCAA CAGACTGCAAAAGAGACTACTAAAGGACCGAGAGGTTCTACAAAGAAGGC AATTGCGAGTATACAGAAAGATAGTGATATTAACAATTCCCACTTAAATG TAGATTCTGTGTGCTGCCAACAGACCATAGACATGACCGACCAAACGGAA AATGAAATATCTTTATCTGATCAAAGTGCAACATCCAGNACATGACCGAC CAAATGGAAAATGAAATATCTTTATCTGATCAGTGTGCAACACCCACTTC GAAAGATCTATCGAAAAAGCTTACAAAAACTAATTCGAAGGCTTCTAATG ATACCTTTTCTCCTCCAAATCATTTACCGAACTCAGATGCCAATCCACAA GAAGGCAAAGTAAGAACTCATTTCACTGGCCAACAGTCGAATGGCGTGGT CAGGCATGAAATAGCAAATGATAGCAATGAAAGTACAAGAAATATTCATC GGGCATCAAATGAATTTTTTTCGGCATCATTTTGTCCTCCATACCAAACA CATCAACATCATGGGAACCATCGTTTTCATGGACCTTTCAACGCTAGAGC TGGCTTACCAAATAATGGTTTCCGAATGATGAGGTGGATACCAAGTGACA ATCATATGCGTATACATTCACCACGCATAATCAATCATTACTCAGAAGAT GGTCTATTACCTGCACCAGGTGAAGAGCTATATCCTGATGATGGTCTATT ACCTCATCCTTCCCCGGGATGGGGTTTACTTCCTCAACCCCAATTTTTGT TAAGAGCACATCCTCCAATGAGGTTGTTTCATCCACCACAAACAGTTTTA AACTCGAATGTTAGTAACGGCAGAGATTTGCCAAGTGTTCACGATAATTC TGTTATGGAACAAGAGTACATTGGCAGTTGCGTTCAAAGTCCTGAGAATC ACACTGGGCCTATTGTTGAAGCTTTAATAAATGAAACTTCTTCCGTTGAA GTTCGTGGTGAACCGTCCAATAATGCATTACGACAAGAAGAACATTTATC CGGCATGGGACATACTAAAGGGAATGCACAGAAACAGAACGTCACTCAAC AACAAGGAGCTACAAAGAAATTTAAAAGGTATAGGCATGATACACGGAAG ATCAAAAAATTGTTGACAAATGCAAAGGAACAAAAAAAGATTGAAAAAGA ATTAAGAAAAGCATTAGAAATAGCAACATCAATGAACAAAGAAAGTGGAT CCTAAATATTATTAAATCGGATCAAATTATCAGTTGGCACTGACATTGAT TGTTTACTTGCTTTGTTATATGATGATCGTGAAAATAATTTTGCTCATAA TTATCTTGATGATGGGAACTAACTTTTGCAGAAACTAACTTTGATGGTGC AACGGTACGATCAAACTTTTTTTTGTGACTGACACTCAAATTTTATGAAA ATTGTACTTTTGCAAAACTAGTCCGTATAAGAAAGTGAACACGAAATTTA GTTCCCACAAAATTGAATTAGTTCCTGTGAAAAATTAGCAAGATACATTT GGAAATCATACCTGACACCCTGGTCTTGAGGAAGTTTATTTACAAAACTA AACGGTAATTTGGAATTTCCTGTTGTGTACAATTTTTGTTGTGTTACGTG AATTTTTGTTGTTTTCGTTAAATATTTTTACATAAAGTTGTCGTTTGGCC CCGTTAAAACAGCTGATCAAAATTTGTGTGGCCTTTTTGGTATTTTTGGT ATTTTCTGTCATGACCTTCCACTACTAAATCGATTTTCGAATCGGTCGAT TTCAAATTCTTATTCAAGCTATGTGACTAAGTTTTCTTTTAATAAAATGT CGTGAATCTTGAGTATTTCTCTATAATTTTACTTTTTCCTTCCGGTAAAA ATCAGATTTTCTTCTTTGGGGAAATTCTCTTTTGGCACTAGGGAAAACGA GCATTTCTCGCGATTTAGGACATGTTTGTGGTAAATCCTTTACATTTAGC TTATAAGTGGTCTAATAATCTATTTCAGAAGAGGAAAAAAAAATTCAAAC AAGACGACTTGAAGTCGAAAATTTCGCATAATACTCGAACATCAACGACG AAGACGCGTGAAACGTGAATCCTGCAGCATTATGCATTTTAAATGGAGCG TTACACAAAATATACACAATGTATTGTACACACAGATCATAGATACCCTG TTTTTTTTTAATGAAAAATCTCAATCTATTAAAAAAAAATATTCCTTCAA AAATGCGACTAAAGAATTCCATTCTATAAAGCGTAAACAAAATCTTTCAA TTCAGAATAATTCAGAGAACTGCAATATACTTGAGAAAAATAATTNNNNN NNNATTAAAAAAAAGATTCCTTCAAAAATGCGACTAAAGAATTCCATTCT ATAAAGCGTAAACAAAATCTTTCAATTCAGAATAATTCAGAGAACTGCAA TATACTTGATAAAAATAATTAAAATTTTTTTTGAAAATGAAAAAGAAAAA ATGAACTTTTCATTCTTTGATGCCAGAAACCTCGTTTAGTGCTTTGAAGG AACTTGTGATAAAGACTTCTTTCACAATCCCCCAGGACAAGGCAAATTTT GTAGATTTTTCACTACCCCCTCCAGACACTATATCCCCCACCCCCATGTA CGGACATTTTCTGGAAGAGCCAATTAAAGGCAAAAAGCAGTTGAGTAGTT GAGCTCCAGCTTCTGGACTAGAAAATTGCAGGGTAAAAACTAGCCAACTT TAAGCTTTAAAGAAATAATACTCCTCGAGATTAAACTTTGACTCCTTCAT AACTGCTTTAAACTGCATCCCATTAAACAAACCTTTCCCAATATCTTGCC GTTCATCCAGTGAAGAGAATATATAGAGGAAAGATTCCAGAAAAGTAACA AGAATCTTAGTGCAGAAATGGGAATCTTATGCAAACAACGGTACCATGAT TCAAAATGAAAATCCTAATTAGCAAAAGGTGTATCAAGATCGGTGAAGTT TGATTGAAGCTCGATTAGTTTGATTTATTACTTTGTTGCCCATTCTTTTT ACATTCCGACGGCTTATTAGCAGACGCCCACGCTAAAGCTTTTAAGGGCT CTGACCATAGTGAATTTTTCATGATTGCCGTGTTTAAGATGTGTTTTCTG ACTGATGTAACCAACAAAACTATGGCATGTTATACATTTTCTCTTAGACA AACTATTCCTGAATCTGAAAATTCAAAAATTGCAATGAAAAAATTTGATG AAGAAGAAAAGGAAGACTTTTGCGAGGAAGAGTATTTCAACTTTGAAGAG CTTAGTTTCGGCGAAGAAAAAACATTTTGAAAATTTTTTCGAAGTAGATG GTGTATCTTTTAGCGAACAGTAAAAATTTTTGCGGAAAATTTTTGTAAAT GCTTCTTTGTCTCGAAATCTTCAAAATAGTGGTTTTTCATCAATTTTTCA TCTGGATTTTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAAAAAAACAGTC ATAACTTTTGACACATCTTTTTAGAAAAATTTTCCGCAAAATTTAAAATA GTTCAATTCTTTGCGGACAGTGTAAAGAAATTTTGAAACTTAGCACTTTT TATAAAAGAAGGTGATGCAACATATTATTAACGTCTTTTTAAAGTTCATA ACGTCATTTCTGCAATTAAAATCTTAATTACTCTGAAGAGAATTGATTAA AAAGCAATTTATAAAGGCAATTCTTTGTTAAAAGTGTTAAAGAACTTAAA ACATAACTTTTATGTTCAAATACTAAAATCAATTTTCTGACTATGGTCAG AGCCCTTAAAGAGCGAGCCAATATCTATCATCCCATCGGGAAGGAAAAGC TGGAACTTTTACTAACCAAACTCATCTAGCACCAATCAAAATTCATCGAA TAAAAAACTGTCATCATTTTAAAGAGGGACTGCTGCACATTGTGCAGTGG TGTATGGTGGGCTGGATCTAAATGTCCTTTGTACAGGGGTGAAAATAGGT TAATTTGAAATCTGCTATACTGTACACCCCACCTTACCCACCGTAAATCA CCGTACAATGACAATGTACGGCAGTGTCTAGGCAGGGTCGTTTCGATTAT ACAAAAATCATTGCTGAATTTCAATTTGACATGATTTCTAAGAAATATAA TGAGATGGGCGCTGGTAACTTGCATCAGTGGAGGCAGGAGATTTTTGAGG GCATGCATAGCCCTCAAGAAATGAATGACCCGTTTGGTCATTAAAATACA AAGTTAAATCAAAACAAAAATGGTAGGTTAGAGCTGCAAGCAGAGCTGCG TAGTTCATTTGTTTTGAAATTTTGCTGCTTTGGTCAAATGCTATGCAAGT TACCCTCCGCTCCACTGATGCAAGTTACCCGACTTCAGTTCACGGTACTT GCTAAAACTGACTGTTTGTCACAACTGGTTTCACTATTAACACATAACTA TCTGGTGAAAAAAGGGAAAAATATCATACCTGTGCTGTTTGTAGTTTTGG TGAAGAAGAGAAGAGAGGGCTAATAATATGTTGTTGTTCTGGAAAATTAA CTCTTTTTGTACTACTTACTGAGCGTGATCAATGTGTTGGTGCATTCACT AACTACACAAACATAAAATACTTAGTAGTAAACAAATAATAAACCTCTTT AAATGCTCTGCAAAAGACCAGAAAACATGATAAAAATTTATAAAAGCAGC AGCAAGTTTCAGCAAGCATGTGCGATCAAGCAGCCATTAAAAAGTTCTCA CGATGAATAATGTTTACAAAGGCTTGGTTACACTTCTTGCACTAGCGAAT TTTATTTATTAAGAAAAGTCCTGTTTTTTTATCACTTTTTATCTTTGTGA GTGAGTCCACCTTTAGAATATTGGCCGAAGTACGCCCGCAGCCAAACGCC CACGCCATAATTTGCGCCCCAAAAAATGTCTCGCCACATACATACACGGA AGGCTATCGTAATTAATAATAATTATATAATTGCAATTTTATTTTTTCTC GTTATAGAAAAAAGTTAAGGAAAAAATTATTCGATTGATTTGAAGAATAT ATAAATGGATACGTTATGGGTGGAAAATCGAAATTATCAACGAACAGATT CACGACTGCAAAAAAAAGCAAGGCAAATGTTGGCTGTATCCATCGAAGAT GCTAACGAAATGTTTGAAGAATCAATCACTGATGCCATAGAATGAAATTC GAGGATTCTATTCAATTGTTCAAAACATAAACTTGATACATCCGTAGAAA TTGCTAAACAAGCCGTCACGTCAGATGATGATTTGGACACAGATTTATCC CTGACTGGGAATGAACATCCTTTTGATTCTACTGGCGAAGACAGAGCGAG TGCTCACGTCGATCAATATAATGCAATGAACAGTGTGAAATTTGTAGTAA ATATTTTTCACAGAAAATTCTTTTTAAACAGCATCTCAATATTCATAAAG GCATTAAACCATTCCATTGTAAAGTTTGTGATATTAGATTTACTCAAAGA ACTGCTATGGTTAAGCACTTAAAGA

Coding sequence (CDS) from alignment at scaffold_329:629203..635327-

>TCONS_00059604 ID=TCONS_00059604|Name=TCONS_00059604|organism=Clytia hemisphaerica|type=CDS|length=3288bp|location=Sequence derived from alignment at scaffold_329:629203..635327- (Clytia hemisphaerica)
ACCCACTTCGAAAGATCTATCGAAAAAGCTTACAAAAACTAATTCGAAGG
CTTCTAATGATACCTTTTCTCCTCCAAATCATTTACCGAACTCAGATGCC
AATCCACAAGAAGGCAAAGTAAGAACTCATTTCACTGGCCAACAGTCGAA
TGGCGTGGTCAGGCATGAAATAGCAAATGATAGCAATGAAAGTACAAGAA
ATATTCATCGGGCATCAAATGAATTTTTTTCGGCATCATTTTGTCCTCCA
TACCAAACACATCAACATCATGGGAACCATCGTTTTCATGGACCTTTCAA
CGCTAGAGCTGGCTTACCAAATAATGGTTTCCGAATGATGAGGTGGATAC
CAAGTGACAATCATATGCGTATACATTCACCACGCATAATCAATCATTAC
TCAGAAGATGGTCTATTACCTGCACCAGGTGAAGAGCTATATCCTGATGA
TGGTCTATTACCTCATCCTTCCCCGGGATGGGGTTTACTTCCTCAACCCC
AATTTTTGTTAAGAGCACATCCTCCAATGAGGTTGTTTCATCCACCACAA
ACAGTTTTAAACTCGAATGTTAGTAACGGCAGAGATTTGCCAAGTGTTCA
CGATAATTCTGTTATGGAACAAGAGTACATTGGCAGTTGCGTTCAAAGTC
CTGAGAATCACACTGGGCCTATTGTTGAAGCTTTAATAAATGAAACTTCT
TCCGTTGAAGTTCGTGGTGAACCGTCCAATAATGCATTACGACAAGAAGA
ACATTTATCCGGCATGGGACATACTAAAGGGAATGCACAGAAACAGAACG
TCACTCAACAACAAGGAGCTACAAAGAAATTTAAAAGGTATAGGCATGAT
ACACGGAAGATCAAAAAATTGTTGACAAATGCAAAGGAACAAAAAAAGAT
TGAAAAAGAATTAAGAAAAGCATTAGAAATAGCAACATCAATGAACAAAG
AAAGTGGATCCTAAATGATAGGAGAATCGTTGGGAAGCATCAACAAGAAA
ATTTACCAGTCCATTAAGAATGCCAGAAAAATGTTGGATGTCTCCATCAA
AGTTGCTAATAAAAGATTTGATGAATCCATCAATGATGCTAAGATGAAAT
TCGAAGAGTCGATCGCCAGTTCCAAACATATACTGGAAACGTCAGTGAAT
ATTGCCAAACAGGCTTTGGAAGAGTCCATAAACGAAGCAAAACTACATCT
AGTGGAGAAATCGGATCAAAATTCTTTATCTGATACAATCAAAGAAGAAA
TTATTGATGACGAAACAACTTCGGAATGTACGGTTGATTGCGCAATACGA
CTGATTGATTACGATTCTTCAGATTCTGAGAACATTGATGATTTACAATC
CCAACAAACGCCAATGGACACTGAAGAACGATCTTCAAAGAAGACGAGTA
AAAGTAAACCTAAAAATAAAGACGACCTTTTGAACTTGAACGTTGATTCT
AAATCAGGCCAACAGACTGCAAAAGAGACTACTAAAGGACCGAGAGGTTC
TACAAAGAAGGCAATTGCGAGTATACAGAAAGATAGTGATATTAACAATT
CCCACTTAAATGTAGATTCTGTGTGCTGCCAACAGACCATAGACATGACC
GACCAAACGGAAAATGAAATATCTTTATCTGATCAAAGTGCAACACCCAC
TTCGAAAGATCTATCGAAAAAGCTTACAAAAACTAATTCGAAGGCTTCTA
ATGATACCTTTTCTCCTCCAAATCATTTACCGAACTCAGATGCCAATCCA
CAAGAAGGCAAAGTAAGAACTCATTTCACTGGCCAACAGTCGAATGGCGT
GGTCAGGCATGAAATAGCAAATGATAGCAATGAAAGTACAAGAAATATTC
ATCGGGCATCAAATGAATTTTTTTCGGCATCATTTTGTCCTCCATACCAA
ACACATCAACATCATGGGAACCATCGTTTTCATGGACCTTTCAACGCTAG
AGCTGGCTTACCAAATAATGGTTTCCGAATGATGAGGTGGATACCAAGTG
ACAATCATATGCGTATACATTCACCACGCATAATCAATCATTACTCAGAA
GATGGTCTATTACCTGCACCAGGTGAAGAGCTATATCCTGATGATGGTCT
ATTACCTCATCCTTCCCCGGGATGGGGTTTACTTCCTCAACCCCAATTTT
TGTTAAGAGCACATCCTCCAATGAGGTTGTTTCATCCACCACAAACAGTT
TTAAACTCGAATGTTAGTAACGGCAGAGATTTGCCAAGTGTTCACGATAA
TTCTGTTATGGAACAAGAGTACATTGGCAGTTGCGTTCAAAGTCCTGAGA
ATCACACTGGGCCTATTGTTGAAGCTTTAATAAATGAAACTTCTTCCGTT
GAAGTTCGTGGTGAACCGTCCAATAATGCATTACGACAAGAAGAACATTT
ATCCGGCATGGGACATACTAAAGGGAATGCACAGAAACAGAACGTCACTC
AACAACAAGGAGCTACAAAGAAATTTAAAAGGTATAGGCATGATACACGG
AAGATCAAAAAATTGTTGACAAATGCAAAGGAACAAAAAAAGATTGAAAA
AGAATTAAGAAAAGCATTAGAAATAGCAACATCAATGAACAAAGAAAGTG
GATCCTAAATGATAGGAGAATCGTTGGGAAGCATCAACAAGAAAATTTAC
CAGTCCATTAAGAATGCCAGAAAAATGTTGGATGTCTCCATCAAAGTTGC
TAATAAAAGATTTGATGAATCCATCAATGATGCTAAGATGAAATTCGAAG
AGTCGATCGCCAGTTCCAAACATATACTGGAAACGTCAGTGAATATTGCC
AAACAGGCTTTGGAAGAGTCCATAAACGAAGCAAAACTACATCTAGTGGA
GAAATCGGATCAAAATTCTTTATCTGATACAATCAAAGAAGAAATTATTG
ATGACGAAACAACTTCGGAATGTACGGTTGATTGCGCAATACGACTGATT
GATTACGATTCTTCAGATTCTGAGAACATTGATGATTTACAATCCCAACA
AACGCCAATGGACACTGAAGAACGATCTTCAAAGAAGACGAGTAAAAGTA
AACCTAAAAATAAAGACGACCTTTTGAACTTGAACGTTGATTCTAAATCA
GGCCAACAGACTGCAAAAGAGACTACTAAAGGACCGAGAGGTTCTACAAA
GAAGGCAATTGCGAGTATACAGAAAGATAGTGATATTAACAATTCCCACT
TAAATGTAGATTCTGTGTGCTGCCAACAGACCATAGACATGACCGACCAA
ACGGAAAATGAAATATCTTTATCTGATCAAAGTGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037491XLOC_037491Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059604-proteinTCONS_00059604-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059604-exon-scaffold_329-1575043694:634596..635327TCONS_00059604-exon-scaffold_329-1575043694:634596..635327Clytia hemisphaericaexon
TCONS_00059604-exon-scaffold_329-1575043694:633224..634536TCONS_00059604-exon-scaffold_329-1575043694:633224..634536Clytia hemisphaericaexon
TCONS_00059604-exon-scaffold_329-1575043694:629203..629720TCONS_00059604-exon-scaffold_329-1575043694:629203..629720Clytia hemisphaericaexon
TCONS_00059604-exon-scaffold_329-1510915933:634596..635327TCONS_00059604-exon-scaffold_329-1510915933:634596..635327Clytia hemisphaericaexon
TCONS_00059604-exon-scaffold_329-1510915933:633224..634536TCONS_00059604-exon-scaffold_329-1510915933:633224..634536Clytia hemisphaericaexon
TCONS_00059604-exon-scaffold_329-1510915933:629203..629720TCONS_00059604-exon-scaffold_329-1510915933:629203..629720Clytia hemisphaericaexon
TCONS_00059604-exon-scaffold_329-1491911889:634596..635327TCONS_00059604-exon-scaffold_329-1491911889:634596..635327Clytia hemisphaericaexon
TCONS_00059604-exon-scaffold_329-1491911889:633224..634536TCONS_00059604-exon-scaffold_329-1491911889:633224..634536Clytia hemisphaericaexon
TCONS_00059604-exon-scaffold_329-1491911889:629203..629720TCONS_00059604-exon-scaffold_329-1491911889:629203..629720Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:629203..635327 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.88838 3.38028 2.0648 2.07017 2.8251 2.63395 3.2165 3.62801 1.37163 1.66752 1.84757 1.04389 1.12262 1.53018 1.37783 1.4327 1.61789 2.13374 0.464611 0.502947 1.26774 1.00217 4.76939 3.99044 2.57283 2.7872 0.454645 0.683704 2.39209 2.8462
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059604 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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