TCONS_00059565 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059565
Unique NameTCONS_00059565
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2720

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059565 ID=TCONS_00059565|Name=TCONS_00059565|organism=Clytia hemisphaerica|type=transcript|length=2720bp
TAATATCGGTTTAGAATTCCGTCATAAAATGGTGCATCGCTTGAAAGATT
TACGGGAAGCTTACACAGTTGAAGAACTTCAAGCTAATGGCTCAGAAAAG
TTTAATTCAACCAGATTGGAAAGTATTCTATTTTTCAATGGATTGGTTGA
ACATTTCTGCTAAGAAAATAAAATCGAGATGAAACTACATATTCCAAACA
AATACAAGTCATTGTATGAATGGATGTGTTTTACTTCGccttcctttgaa
aatgaacTATTAGATGAAGTTGATTCAAAGATCTTCCCAAGGAGTTCACT
TCCCTTAGAGAAGATGAAGAAATACCATGGTCTTGAGATGAAAGGTACCA
TTCCATTGAAATATATTGCATTGGTGAAGTGCAATTAGAAGAGCATAAAT
CGTTGGATAGACATTTATCACAGTTACCGAAAACGTTTGGTCGCACTGCC
ATGAGAataaacaacaacaacaaaagaattACGTAAACAAAAGACCAATT
GTGTTCAAAGAATCAAGTTCAAATGGATATCAATTTATTACCAGATGAGA
TACTAGAAATAATCATTGCGTTCTCGGAAAAGGAAGATGCAAAAGCTTTA
TCACGAACATCAAAAAGAATGTATAATCTTACTATTGAACGAATTNCATT
GCGTTCTCGGAAAAGGAAGATGCTAAAGCTTTATCACAAACATCAAAAAG
AATGTATAATCTTACTATTGAACGAATTTGGTCAAAACCAAGATTTTATG
GGAAACGAGATCATTCTTTCTTGACAAAAATAACGAAATTTCCGATTAAA
GAGTTGCATACAAACGATTTTAATTGTCTTTGGTCCAAAATTTGTGATAT
CGTTTCTGGACTTGACTTATTACATATTGATTATAACGACAATGATGAAA
CCTTTGAAGACAGATTAGACGATATTTGTGAAATTGCAAAACCACCAATT
GTTCTGCACACAAATGCCCTTAATATGAAATACAGAGACgactttgattt
gtttttgaacGGAATTCTCGGCGGTGCTTGTTCGATACGAAAGTTGATAA
TCAATCCCAAGTTTAGTAGCGATGAAAGAAGAAACTGTGCTTGGTCACCT
AAACAACTTGAAATGGTCagtgaaaaagttttcattgaGGAAATTTTGTC
GAGTTCTTTATCGATCACTGATTTTGATGAGCTTGTTAAAGTTTTGTGTA
AACTTAAAGGAACACGTGTCAATATTTCTGAAACGTTCAATAACCAATAT
ATTTTAACTGTTGAAGATTTGGATAAACTTGCATCGAATAACATAAAAGT
TTTCAAGATTGATTGTGTTGCCCTTGAATATGGTTTGTCGAGTGATGGCC
TTACAAAGTTTGCTCCtgtactttcaaaatttcaatctttGGAAGAGTTT
AGCATTCGTCATGCTTACTGCCAAGATCCAATACCTATTCAGTTATTTAT
TGGTTTACCGCTAATTACGCTTTCTACAACACAGATTCGTTGGGAAGCTG
GTAAAATTGCTGAGATTGTTAAATTATTATCTGAAATCAAAACCCTGACC
CATTTAGACTTAATAAAAAGTAATCATTCAGATTATAAACTTTCCCTTGC
GgattttgaacttttcaaaattttaccagTAGTAATGTTTTTGGAGTTGG
AAGCTTTAGATTTGACAAAGAAAAACGTTCCAGAATTTCGTAACATCATG
CTTgagatgaaaattgaagatattTACTGGTCTTCTACGGGTGAATATtc
gaattttgatatttctctaAAATCACATGGACCAGATGATTACAAAACCA
TTTAAATCATTTAAAGATCAGGATNAGGAGCTAgtctttttttcattatt
ttattctGTTCCCTCTAGACAataataaaagaagaaaaatatacaGAAAG
GGAAATATAAAAGATAACTAAagtgcaaccgatatgaaccGAGAAAGCAC
ACTTGAAGAAGCAATTCGTAATACCAGAAATTTATTGGGCGTTTCAATTA
ACCTCAGGAAGAAAAAGTTTGAACAATATCTTTCAGATGCTACAAAACAA
TTCGAATAAGCGATAACACAATCAAAACATATTTTAGAAACATCAATCAC
AATTGCAAGGAGATCACTTGAAGATGTCATTTCACAGTTGTCTTTAAATC
CATCATTGACTCAGATCAATGCGAATTCTAAAAGAGGTTTAAAGGAAGAT
GAACGCGAATTGAAAATTTCTAGACAAGAACGCTCTTGTACTAGTGATAA
TCCAATTAATCACAACTACCTCAGCACCACTATAAAACAAGGGTTTGCAG
ATGATATTGATATTTCAACCACTGGTGATGACATTTCCTTTAGTCAACAA
CGCTGACCTGCTGAGAATTTTAAGTATACCCCACGTAATGATGAGACATC
CCAAAAACAATATTTGGCAGACATTTCAATGCCATTATACAGTGAAGAAA
ACTCGCCCCTTAGTCAACACTGTCCAGCAAATGAACTGCTAACTCCTTCA
GTGGAACCTATAGGTCAGCAATCACAGACAAGCTTGGACCATAATCGGGT
ACACATTGATTTGTTGTGCAACCTGCTACCAAATGTTATCGGTTTAGAAT
TCCGTCATAAAATGGTGCATCGCTTGAAAGATTTACGGGAAGCTTACACA
GTTGAAGACCTTCAAGCTAATGGCTCAGAAAAGAGGGCGGGGGAATGCCA
AACCTGAAAGACTTCCAGCA
Run BLAST on NCBI

transcript from alignment at scaffold_329:817807..829399+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059565 ID=TCONS_00059565|Name=TCONS_00059565|organism=Clytia hemisphaerica|type=transcript|length=11593bp|location=Sequence derived from alignment at scaffold_329:817807..829399+ (Clytia hemisphaerica)
TAATATCGGTTTAGAATTCCGTCATAAAATGGTGCATCGCTTGAAAGATT
TACGGGAAGCTTACACAGTTGAAGAACTTCAAGCTAATGGCTCAGAAAAG
GTattgtttaatttttagttagggaattacatgtttttctttcataagCA
AAACGTTTATGAGAATATaaaggctcagtttttggtaccttaacaatggc
tctattgtttgagaacaatagaatgctaagcataatgcgagcctgatata
gggacagacacttgcttataaaaaaaatgtaagtgTTTATTCCTGAGAAA
ATGTTATTCTGTTTACAGCTAAGGGTAACATTTTATAAGCAGTTCACTAT
AATATTTGTAAACACGGCCAGTCttacattttcatcttaaaacaACTTTT
CTGAAGTGATTACTTACGGATTTGAGGCCAACAAATTGCTTGCACTTGCC
GAATTGGACTGGCAGAGTTGTGAAGTCTTTCAGGTTTCTCAGAGGATACT
CACTGTATAACAAAGAAGGAAAATTGTCTTTATGGAAGAATACAATCGAT
TTTGAAAAGGTGGCTCTTTATCCAAACCGAAtgatttttattagtttttt
tttcataaagggCGGGTGAATGTGACTAAGCCAAACCTGAAAGACTTCCA
GTAGCTTAGACAAGAGGAGCCACagtacattttatttttattttacgaat
gGATAAAAACAGTGTCATGAAAATCTgcacacaaattttgcgccccacTT
GTCTTCGCTTCTGAATTTTTATCCCCAGAACAAGTCAATTTTCTTTCCAT
TTCAGTTTAATTCAACCAGATTGGAAAGTATTCTATTTTTCAATGGATTG
GTTGAACATTTCTGCTAAGAAAATAAAATCGAGATGAAACTACATATTCC
AAACAAATACAAGTCATTGTATGAATGGATGTGTTTTACTTCGccttcct
ttgaaaatgaacTATTAGATGAAGTTGATTCAAAGATCTTCCCAAGGAGT
TCACTTCCCTTAGAGAAGATGAAGAAATACCATGGTCTTGAGATGAAAGG
TACCATTCCATTGAAATATATTGCATTGGTGAAGTGCAATTAGAAGAGCA
TAAATCGTTGGATAGACATTTATCACAGTTACCGAAAACGTTTGGTCGCA
CTGCCATGAGAGTAAGAATACTTTACCAACTTCAAATATATCTTATACGA
TTTCATTGTTGTGAGGTGATTTTCTCATTAGAGATGCTTCAGACCCGGTG
GAAGCAGTGAGACTGGGGAGACTCCCCATTGTTGCGTAAATGAGATTTTT
CCcctcaaattcctagcgaattttatctcattttgagccttcagcctgcT
CTCTCTTACAGGAGAGGAAGATTGTGATCTTTTAACAATATAGTGAACGC
AGGTTCTTTTCCTTCCCTTAGATAGTCTTAGTATTCATTCCAGTATTTCC
ATCAATGGTTTTTaccatacacgcttttttttataagaatacactttata
agaatgtccatgatgaaaatggccaaaaaattaagaatatgctaagaatc
accatcatggaattttgctactcaagctaagaatgctattgttagagcat
tttcaattataaattgtcaattacccccaagtaaggcccactcctttcac
aaaaatgccatgcTTGAGACGCATGTACTAAATGTTATATCTAGTCTGAA
TATTAGAACCATAACCtaagaatgctgtaagaatattttaggatgatttt
cccaaaaaagttaagaatatccatgatgaaatggatttacaccattctta
tataaaaaaaagcgtgtatcattGATTTTGTGGTTTTTGGGTTTGTTTTC
TCTAGTTTTTAGGTTCAAAACTTTCATTTGGAAAGGTGGATTTTGGTCTT
TAACAACAAAACTGTAATGCTTTTTTCATGTCTCTCCCTTTCAGATAGCC
CAAAAGAAGACTTTTGAGGTCTTTAACAATCAAATTGAAAGTTATTGTAA
TAAACGGGTTTTGAATATCCAGGAATTTGTTAAAAATATgagaaagaata
aagaaatcGAAATGGAAGATGTACTGTCTAATCAAGATACAGGACATACT
ATGgaatataataataatagtaataataatatACTAAGCCTTCAATTTGT
ATAGTCAGAATGTTTGTACAGATTTGTATGTCAGGTCTGCGGCTGAAATC
TTACTTTGTGTTTTACTGGAAAACGAAAATGGTGTCTTCACAATCAAGTC
TTCCAAAGGAGAATGGATCCTATATTTAGCAAACTAATTGAACTTAATTA
ATGatgaaatttgtgtttttgataTAATGAGGTAATCTCGTCGTTTTGAG
TTCTCGGTGTTAATTGAATGAAAACTAAcacatgaaaaaattttcgattt
ccaaggctggaaatttcaagttttcttagttggaaaaaagataaaatcca
atggaaaatccaacctggaaatgtgggacattctccaaggctggaaattt
caagttttcttagttggaaaaaagataaaatccaatggaaaatccaacct
ggaaatgtgggacattctccaaggttggaaattttgcattttccatggca
tagaattttcaaaaatttagttggaaaaaagccaaaatccaaatttaaca
aggctggaattttttaaaattcagttggaaaaaagccaaaatccaaattt
aacaaggctggaattttttaaaattcagttggaaaaaaagacaaaatcca
aatttaacaaggttggaattttcaaaaattcagttggaaaaaagccaaaa
tccaaatttaacaaggttggaattttttggccacttttttttctcaatgt
gTTCTTAGAGTATGTTTCAGTCAGatattttgatctgttctgattagagA
TTTGTAAATCATTCAGAAATGATTATGTGTTCTAAcgcgagacaggggta
taatcaaggttATCTAGCGCGATCTTGTTGCCTAGCAACCCAAGTAAGTT
TCAAAACACATCTTTTGTGGAAAATAACGAACATCTTGCGAGTACTCtct
ggtacctaatagccggggggtttggaataagcaaagggattggaaaaaat
ctcaacacTTGATAAGCGGGAAGGAGGGGGTGGCAATAAAAATGTCgtag
gtggaaaattttcaaaaaggagGGTAATATATGGAATGCCATAGCTGCTA
TAAGTGCACTTTACGCAAGAcctcttttttcaatttccaatggaaatttg
aaagGGACTttgccaaaaaatatttttgaaccaAACTTAAAAAGTCAAGT
AACtacttttcatatttttactgGTATCAAAGAAGTGCTAATAATGCTTA
TTTTAACCGATATGCTTAATTTGGCagttaaaaaggaaaaaatcgtTAAA
ATGTAATTTCTCAATAGTGTCATCcgtgaaattaaatccccgtGAAATGA
TAAAATGTCGCGGATAAGTTCAACCGCGAAGTTTAATCCCTGCGTAAATT
TATCCGTTTAAAGTAACAGTCTTTCAATGTTTTCAAGTCCTAACATCATA
AATCTCGGGATATTCTTTGGATCTTAAGCATTCTAAACCTTATTCTGTTT
TCTTAACTAGATAAACAACAAAAGAATTACGTAAACAAAAGACCAATTGT
GTTCAAAGAATCAAGCTCAAATGGATATCAATTTATTACCAGATGANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTGTAGGGATTCTCATGCTTGGTTGAGTTACGTAATT
TCGGTCATTATGGGAGCAAACATTCGAataggctcttccagaaaatggaA
AGATATATTGGATATATGGTCcggaaaatagtcaaaaaattcaaaatttg
ccttgattGGGGGCAAAACTGCTCTGTTTAGGGGTATTTATGAATGTCCG
GTGGTCAAAAGTCTCAATGTCCAATCTGTAGATGCATTCCTTACACAATT
CGTATGTTGGCTTcgataatggcggaaattacgtaacatGAAAATCTCTC
TGCGCAACGGTACTATATTTAAATGGACGTCCTTCTTTTCAAGATGCATC
CTTAAGATTAAGGACGATTTTCCCACTGATTATTACCAATCTATTTTCCG
TAAACGTTGATTTACTTTAATGGGACGAATTTCTGCAGGGAATAAATTTC
GCGGGCTTTGCAAAAAGGCCTTTccaaggaaatatttttgaagaaaactt
aAAAACTCAAGTAACTATACTTTACATATTGTTTACTGGTAAAAAAGCAG
TGCTAATAATCCTTTTTTCGATAACCGACATGCTTAATTTGGCAGTTAAA
AGGCAaaaaaccatgaaaatattATCTCTCAATAGTGTCATCcgtgaaat
taagtccccgtgaaatgaaaaaaattcgcaGATAAGTTTAACAGCGAagt
ttaatccccgcgaaaatttattcttttaaagTAACAgtctttcaagtttt
tcaagttCTTACAGGGCTcaaaataacggtcggacattggacattgtccg
acccaaatagcttcatgtccgacccaaaaatcataattttcaagctaaag
caaccctgatcggacattttgtcccacccacttgaaatcgttatttcgag
ccttatCATAAATCTCGGGATATTCTTTGGATCTTAAACATTCTAAACCT
TACTGTCTTTTCTTCACTAgataaacaacaacaaaaaaaaaacacgtaaa
CAAAAGTGTTCAAAGAATCAAGCTCAAATGGATATCAATTTATTACCAGA
TGAGATACTAGAAATAATCATTGCGTTCTCGGAAAAGGAAGATGCAAAAG
CTTTATCACGAACATCAAAAAGAATGTATAATCTTACTATTGAACGAATT
NAAGCTTTATCACGAACATCAAAAAGAATGTATATTCTTACTATAGAACG
AATTTGGTCAAAACCAAGATTTTATGGGAAACGAAATCATTCCTTCTTGT
CAAAAATAACGAAATTTCCTATTAAAGAATTGCATACAAATGAGTTTAAT
TGTCTTTGGTCTAATATTTGTGATATCGTTTCTGGGCTTGAGTTAATACA
TATTGATAATAACAACAATAATGCAACCTTTAAAGACAGATTAGACGATA
TTTGTGAAATTGCAAAACCATCAATTGTTCTGCACACAAATGCCCTTAAT
ATGAAATACAGAGACgactttgatttgtttttgaaagaaattctcGGCGG
TGCTTGTTCGATACGAAAGTTGATAATCAATCACAAGTTTAGTAGTGATG
AAAGAAGAAACTGTGCTTGGTCACCTAAACAACTTGAAATGGtcaatgaa
aaagttttcattgaGGAACTTTTGTTGAGTTGTTTATCGATCACTGATTT
TGATGAGCTTCTTAAAGTTTTGTGTAAACTTAAAGGAACACGTGTCAACA
TTTCCAAAACAAGCTTCAATAACCAATATCTTTTAACTGTTGAAGATTTG
GATAAACTTGCAACGAATAacataaaagttttcaaaattgattgTGTTGC
CCTTGNNNNNNNNNNNNNNNNNNTGCTCctgtaatttcaaaatttcaatc
tttGGAAGATTTTAACATTCGTCATGCTTACTGCAAAGATCCAATACCTA
TTCAGTTATTTACCGATTTACCGATAATTATACGCTTTCTACAGCACAGA
TTTGTTGGGAAGCTGGTAAAATTGCTGAGattgttaaaatattatctGAA
ATCAAAACCCTGACTGATTTAGACTTGGAGGTAAATAATCATTCAGATTA
TAAACTTTCCCTTGCGGATTTTGAACgtttcaaaattttaccaaTAGTCA
TGTGTTTGGACTTGGATGCTTTAGATTTGACAAAGGAAAACGTTCCAGAA
TTTCGTAAAATCATGCTTgagatgaaaattgaagatatATACTGGTCTTC
TACGGGTGAATATtcgaattttgatatttctctaAAATCACATGGACCAG
ATGATTACAAAACCATTTAAATCATTTAAAGATCAGGANNNNNNNNNNNN
NNNNNNNNNNNGAAGATATTTACTGGTCTTCTACGGGTGAATATtcgaat
tttgatatttctctaAAATCACATGGACCAGATGATTACAAAACCATTTA
AATCATTTAAAGATCAGGATACAGTATGCCATACTTATAAGGGNATATTT
ACTGGTCTTCTACGGGTGAATATtcgaattttgatatttctctaAAATCA
CATGGACCAGATGATTACAAAACCATTTAAATCATTTAAAGATCAGGATA
CAGTATGCCATGCTGATAAGGACGGTATGCATAAACCTGCCACCCAAATC
TTccgagtgaatatagttggacagaagtttttatttctttaatttttatt
ttatttcactgatgattggtgcctgagcaccatgaaactctgagtttgaa
acatagatattgtgtcaactctttattaaatttctttaaatatagataac
ctccaagcagctcttcgtgctccacacattccacgcatgcgctctaaagg
gaatggttctgcaagaagacctgcgaaggttctcgggttttctttgatgg
ccgacactctgaaatttcagagtactTTTCACGATTCAATCGCGGGCATT
CGCATAGAATTTATCGATTTACTCGGGCCGTCTTTGGATGCGTGGGCTAA
AGAAAACCGATTCTACTGCGACCGTGGCTTTCTTGCTCCGAACCAAATTT
CAAGATGGCGCCTGAAATTCACGTTTTGGCTAttggtcaatgttttgatt
ttttttatggaTTCTGAGACTTATAAAGGAAAGTTCAATGTTCCAaatgt
tgtttatttattttagtgtAGCTCTGACATACACCCACAGAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCTT
TTAAAGTAACAGtctttcaaggttttcaagtcCTAACATCATAAATCTCG
GGATATTCTTTGGATCTTAAACATTCTAAACCTTGTTCTCTTTCCTTAAC
TAgataaacaacaacaacaaaagaattACGTAAACAAAAGACCAATTGTG
TTCAAAGAATCAAGTTCAAATGGATATCAATTTATTACCAGATGAGATAC
TAGAAATAATCATTGCGTTCTCGGAAAAGGAAGATGCAAAAGCTTTATCA
CGAACATCAAAAAGAATGTATAATCTTACTATTGAACGAATTNCATTGCG
TTCTCGGAAAAGGAAGATGCTAAAGCTTTATCACAAACATCAAAAAGAAT
GTATAATCTTACTATTGAACGAATTTGGTCAAAACCAAGATTTTATGGGA
AACGAGATCATTCTTTCTTGACAAAAATAACGAAATTTCCGATTAAAGAG
TTGCATACAAACGATTTTAATTGTCTTTGGTCCAAAATTTGTGATATCGT
TTCTGGACTTGACTTATTACATATTGATTATAACGACAATGATGAAACCT
TTGAAGACAGATTAGACGATATTTGTGAAATTGCAAAACCACCAATTGTT
CTGCACACAAATGCCCTTAATATGAAATACAGAGACgactttgatttgtt
tttgaacGGAATTCTCGGCGGTGCTTGTTCGATACGAAAGTTGATAATCA
ATCCCAAGTTTAGTAGCGATGAAAGAAGAAACTGTGCTTGGTCACCTAAA
CAACTTGAAATGGTCagtgaaaaagttttcattgaGGAAATTTTGTCGAG
TTCTTTATCGATCACTGATTTTGATGAGCTTGTTAAAGTTTTGTGTAAAC
TTAAAGGAACACGTGTCAATATTTCTGAAACGTTCAATAACCAATATATT
TTAACTGTTGAAGATTTGGATAAACTTGCATCGAATAACATAAAAGTTTT
CAAGATTGATTGTGTTGCCCTTGAATATGGTTTGTCGAGTGATGGCCTTA
CAAAGTTTGCTCCtgtactttcaaaatttcaatctttGGAAGAGTTTAGC
ATTCGTCATGCTTACTGCCAAGATCCAATACCTATTCAGTTATTTATTGG
TTTACCGCTAATTACGCTTTCTACAACACAGATTCGTTGGGAAGCTGGTA
AAATTGCTGAGATTGTTAAATTATTATCTGAAATCAAAACCCTGACCCAT
TTAGACTTAATAAAAAGTAATCATTCAGATTATAAACTTTCCCTTGCGga
ttttgaacttttcaaaattttaccagTAGTAATGTTTTTGGAGTTGGAAG
CTTTAGATTTGACAAAGAAAAACGTTCCAGAATTTCGTAACATCATGCTT
gagatgaaaattgaagatattTACTGGTCTTCTACGGGTGAATATtcgaa
ttttgatatttctctaAAATCACATGGACCAGATGATTACAAAACCATTT
AAATCATTTAAAGATCAGGATNAGGAGCTAgtctttttttcattatttta
ttctGTTCCCTCTAGACAataataaaagaagaaaaatatacaGAAAGGGA
AATATAAAAGATAACTAAagtgcaaccgatatgaaccGAGAAAGCACACT
TGAAGAAGCAATTCGTAATACCAGAAATTTATTGGGCGTTTCAATTAACC
TCAGGAAGAAAAAGTTTGAACAATATCTTTCAGATGCTACAAAACAATTC
GAATAAGCGATAACACAATCAAAACATATTTTAGAAACATCAATCACAAT
TGCAAGGAGATCACTTGAAGATGTCATTTCACAGTTGTCTTTAAATCCAT
CATTGACTCAGATCAATGCGAATTCTAAAAGAGGTTTAAAGGAAGATGAA
CGCGAATTGAAAATTTCTAGACAAGAACGCTCTTGTACTAGTGATAATCC
AATTAATCACAACTACCTCAGCACCACTATAAAACAAGGGTTTGCAGATG
ATATTGATATTTCAACCACTGGTGATGACATTTCCTTTAGTCAACAACGC
TGACCTGCTGAGAATTTTAAGTATACCCCACGTAATGATGAGACATCCCA
AAAACAATATTTGGCAGACATTTCAATGCCATTATACAGTGAAGAAAACT
CGCCCCTTAGTCAACACTGTCCAGCAAATGAACTGCTAACTCCTTCAGTG
GAACCTATAGGTCAGCAATCACAGACAAGCTTGGACCATAATCGGGTACA
CATTGATTTGTTGTGCAACCTGCTACCAAATGTTATCGGTTTAGAATTCC
GTCATAAAATGGTGCATCGCTTGAAAGATTTACGGGAAGCTTACACAGTT
GAAGACCTTCAAGCTAATGGCTCAGAAAAGGTattgtttaatttttagtt
agggaattacatgtttttttcttttataagcaaaacatttataagcatat
gaaggctcagtttttggtaccttaacaatggctctattgtttgagaacaa
tagaatgctaagcataatgcctGATATAGAAGCAGACACTTATAAAATAC
ACGTAAGTGTTTATTCTTGAGAAATGTTATTCTGTTTGTTACATCATGGG
TAACGTTTTATGTGCAGTACACTATAATATTTGTAAACACACCTAGTTTT
ATATTTTGATCTCAGAATGATTTTTATGAAGTGATTACGGATTTGAGGCC
AACAAATTGGTTTGCACTTGCCGATTTCTTACTAGTTGTTAAGTAGAAGT
CTACCAGGTTCATCAAGGGAggcgtccacatagtacgtacgcactaaagg
GGGGAGTCATCttaaaagcgtatgcttgcgtacggaaatgtacgtacgca
gagaaaatcttttcatagcccttttttgcttgttttttgtcgatttttac
gCTTCTtttacgcatcaaggaaaaaaaaagtttcttaataaaaattgagt
ttcatgtatgaattaaaggtccgaaccaaacgatttgaattcgaaatttt
cttcaaccgaggggggtTGTGGatgaaaagtacgtacttaccaggggggg
ggtaaagccatttgcgtacgcttgcgtacagggggtatccgattttcgac
attttagtgcgtacgtactatgtggacgccCCAAGGATACTTATAACAAA
GAAAGGAAATTTGTTATTATGGAAGAATACAATCGATTTTGAAAAGGTGA
CTCTTTATCCACTCACTCCCAGTTTTTAGGGTTTTATATGAGACCTTTTA
GATGCTAATTTGAAGAAAGACCTTATCAGTCTGAATTCAAACCTTTTAGA
TTTAGTTTTGAGACCTTAGCCGGTTATGATTTTATTTGTCTCTTTTTTTC
TCATAGAGGGCGGGGGAATGCCAAACCTGAAAGACTTCCAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037478XLOC_037478Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059565-exon-scaffold_329-1491911889:817807..817906TCONS_00059565-exon-scaffold_329-1491911889:817807..817906Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1510915933:817807..817906TCONS_00059565-exon-scaffold_329-1510915933:817807..817906Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1575043694:817807..817906TCONS_00059565-exon-scaffold_329-1575043694:817807..817906Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1491911889:818612..818967TCONS_00059565-exon-scaffold_329-1491911889:818612..818967Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1510915933:818612..818967TCONS_00059565-exon-scaffold_329-1510915933:818612..818967Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1575043694:818612..818967TCONS_00059565-exon-scaffold_329-1575043694:818612..818967Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1491911889:826160..828386TCONS_00059565-exon-scaffold_329-1491911889:826160..828386Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1510915933:826160..828386TCONS_00059565-exon-scaffold_329-1510915933:826160..828386Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1575043694:826160..828386TCONS_00059565-exon-scaffold_329-1575043694:826160..828386Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1491911889:829363..829399TCONS_00059565-exon-scaffold_329-1491911889:829363..829399Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1510915933:829363..829399TCONS_00059565-exon-scaffold_329-1510915933:829363..829399Clytia hemisphaericaexon
TCONS_00059565-exon-scaffold_329-1575043694:829363..829399TCONS_00059565-exon-scaffold_329-1575043694:829363..829399Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:817807..829399 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.622488	1.1127	0	0.78726	0.229168	0.456856	0.529524	0.547457	0	0	0	0.413406	0	0.280688	0	0	0.38398	0	0	0.00293482	0	0	2.15598	1.20622	0	0.871672	0.00949925	0.00051258	1.08366	0.220791
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059565 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top