TCONS_00059755 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059755
Unique NameTCONS_00059755
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length249

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059755 ID=TCONS_00059755|Name=TCONS_00059755|organism=Clytia hemisphaerica|type=transcript|length=249bp
AGCCGGTAGGGAAAAAAGCTTGTTTTAGATTTTCGGTACAAAAAGAACat
cttttaaaacaattttaactTTCTCAGTCGTATCCTTAACTGTCAATTGT
ACATCGCCTTTTCCATAAGAGTATAAAATACTCTCATCAGCAAGTCTCAC
TGTGTGTTATAGGTTCTTTAAAAGCAACATAATTTTCGATACTTTCTTTT
TGGGGCGTCATATGTTGGGTAGCGCCAGAGTCTATCCACCAATTTTCGT
Run BLAST on NCBI

transcript from alignment at scaffold_330:33964..34212

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059755 ID=TCONS_00059755|Name=TCONS_00059755|organism=Clytia hemisphaerica|type=transcript|length=249bp|location=Sequence derived from alignment at scaffold_330:33964..34212 (Clytia hemisphaerica)
ACGAAAATTGGTGGATAGACTCTGGCGCTACCCAACATATGACGCCCCAA
AAAGAAAGTATCGAAAATTATGTTGCTTTTAAAGAACCTATAACACACAG
TGAGACTTGCTGATGAGAGTATTTTATACTCTTATGGAAAAGGCGATGTA
CAATTGACAGTTAAGGATACGACTGAGAAagttaaaattgttttaaaaga
tGTTCTTTTTGTACCGAAAATCTAAAACAAGCTTTTTTCCCTACCGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037584XLOC_037584Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059755-exon-scaffold_330-1491911889:33964..34212TCONS_00059755-exon-scaffold_330-1491911889:33964..34212Clytia hemisphaericaexon
TCONS_00059755-exon-scaffold_330-1510915933:33964..34212TCONS_00059755-exon-scaffold_330-1510915933:33964..34212Clytia hemisphaericaexon
TCONS_00059755-exon-scaffold_330-1575043694:33964..34212TCONS_00059755-exon-scaffold_330-1575043694:33964..34212Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:33964..34212 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.778846	0	1.27572	0	18.804	0.994567	0	0.937433	1.96896	7.08703	0	0	0	0	1.94894	0.474607	1.75403	0.599275	0	0	0	0	0	0.811876	0	0	2.90248	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059755 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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