TCONS_00059846 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059846
Unique NameTCONS_00059846
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1338

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059846 ID=TCONS_00059846|Name=TCONS_00059846|organism=Clytia hemisphaerica|type=transcript|length=1338bp
ATTGTCACCAAGAAAGAATGCCACGAATTATCAGATCCTTCACTGCTAAT
CACAATATAGTCAATGTCCTTGTCGATGATAAaCATGTTGGAATGGTTAG
TTTTTTAGAAGACTCTTTGGATGATTTGACACACAGCCGTAGAGAATCAG
CGGATTCTGTGCAACGTTACATGAGTCCTAACGCAACAGCATCAACAATT
TTAGTTGCTAACGTCCCATACATTGAACAGCCACTTTTGATTTTCGTTCG
CTTAGAGGAAGCTCGTAAACTTGGtaatttgaatgaaatttcACTGCCAG
TACAAGCGCTCTTTCTTTTGTTAGCACCTGAGGAAAGTCGAGAAGAAGCA
TTCCAAGTTGGACGTACTATTGGTATTTTACTGTCGGATGAAAGTTTTTG
GAGTCTGGTCAATGAGTGCCAGtTATGGTCAATACATGCGAAAGTCGTTT
CAAGTTAGTAAAGGTATTACGTAAATTGAATACCGAGTACCAAAGAACAA
GAGATATTTTATCAAGCAAAGCTTTAGAAGTGGCAATTCTTGGTGATGGC
AAGAAGATCGATAAACGAATGGCATGTTTAAAGACGATCGAAATACCAAC
TGAAGAAGACATTTTCACCGAAAAACCACCCGCTAAATTGATCGGGaaaC
ATTACCTACGATTAAACTTCAATAAGATAGTACTGGAAGTTTTCAATAAA
GAATTACAGAACGGATTTCCACTCTTGAATACTCTACCCACGGAAgatgg
aaaaatagaaaagctgagagaaattcaaaatgaaatccagaAGAGATTGA
AAAACCAGACCAGCAATATTGAGAAACAACTTGAGtTATTCAAGGATGCT
GCCAAAATTAATGGGCTTGATATTGCATTGACTGAACAACAagcttttaa
actgaaaatcaaactacaattcattgaaatgaaaaatgaaaaggaatATT
CAGAATGTTTTAACGAATTTGCAAGATTACGACAATTCTTCAATAATTTA
CGATACTTTTACGAAGATTTTATTGCGGATGGCAAAGTTCGTATCAGACA
ATGCCGGTTATTTGGTTGATGAGAAAGCGACTTGTGATATTTTGTACATT
GTATCTTTTAAGGATTTTTagtattatttattttataggGTAATTTATAA
TTAAAGTCTGTTCGTCTGACCTCTTGTGCACACTTAtagtgaatagactt
taggaatcataatttaggtaatataatataatatttataggagaaaatag
aaaaataaaattcgttTTTAACATGTATCTGGAAGAGCAGAGCAGAGCAG
AGCAAAGCACATTTTGATGTAATACTCTGCTCCAGGAC
Run BLAST on NCBI

protein sequence of TCONS_00059846-protein

>TCONS_00059846-protein ID=TCONS_00059846-protein|Name=TCONS_00059846-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MVNTCESRFKLVKVLRKLNTEYQRTRDILSSKALEVAILGDGKKIDKRMA
CLKTIEIPTEEDIFTEKPPAKLIGKHYLRLNFNKIVLEVFNKELQNGFPL
LNTLPTEDGKIEKLREIQNEIQKRLKNQTSNIEKQLELFKDAAKINGLDI
ALTEQQAFKLKIKLQFIEMKNEKEYSECFNEFARLRQFFNNLRYFYEDFI
ADGKVRIRQCRLFG
Run BLAST on NCBI

transcript from alignment at scaffold_331:913404..929876+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059846 ID=TCONS_00059846|Name=TCONS_00059846|organism=Clytia hemisphaerica|type=transcript|length=16473bp|location=Sequence derived from alignment at scaffold_331:913404..929876+ (Clytia hemisphaerica)
ATTGTCACCAAGAAAGAATGCCACGAATTATCAGATCCTTCACTGCTAAT CACAATATAGTCAATGTCCTTGTCGATGATAAGTGAGTAAAAACACTATT TACCTCAAGGGAATCAATTCTTCCTCTCCTCTTCTCTCTTCTAATTTAGG TGAAAGAGCTAAAATCgccaaaaacttattttttaccATGATTTTTATCA GTGTATAAATTGACACTCTGAAGCCATCCTATATAAATTAAAttctgtct caaaagtatgcGAGCATCTTTTAGACCATTCTTCTTAGAagtatctttcc aacgatgaaGAAAATGACGGAAATTCGTCGGTGACGAAAATTTCAACTAA AGCAGTCActtcatttttctgttttctataTTTGCTGCTTTTATATTTCA CGTctcctttccaacggtgtatagcTTATTTATAATATAACATTAATACG TGTtgagaaattgtcaaaaaagttAATGATTTTTGCGAAAGATAGGGTAA ATCAGTTCTTTTCTTCCCTTTCGATCTTCCTCAAGGAAGCGTATGGCACC ACCCTTTCCATTGGATTACTACATCCTGTCCCTCGTGATCCAAGTTTTCA TAGTTAACGGTGatcctttttattttatttttctatagaCATGTTGGAAT GGTTAGTTTTTTAGAAGACTCTTTGGATGATTTGACACACAGCCGTAGAG AATCAGCGGATTCTGTGCAACGTTACATGAGTCCTAACGCAACAGCATCA ACAATTTTAGTTGCTAACGTCCCATACATTGAACAGCCACTTTTGATTTT CGTTCGCTTAGAGGAAGCTCGTAAACTTGGtaatttgaatgaaatttcAC TGCCAGTACAAGCGCTCTTTCTTTTGTTAGCACCTGAGGAAAGTCGAGAA GAAGCATTCCAAGTTGGACGTACTATTGGTATTTTACTGTCGGATGAAAG TTTTTGGAGTCTGGTCAATGAGTGCCAGGTGAGTggttttttaaatgatt tattttccttttccttttacTTTGATTTAACGAATCAGACCGAATGCTAT TCTGTAGCCCTTTTCAGACGAGAAAAATCTGATTTTCTAACATCTCCTAT ATGTAAGTAAAAGTAGAGTTATTTCCTGAAGATCCAATCGAAACTAAACA GtagttttaaagttatttttaagaataacaATCGAAGCTAACTAGCAGTT TTGTCTGCAACTGTAGAGACATGTAATAATAAGATCCAGTAGGCTGATTA CTGGAAGAAGATTTCTTATTATATAGTTAGAAGTTAGAGTATATATTTTA GAAGTTACACGCagtttatattttcaatatatttatAGTTACCAAGTGAC ATTATATCAGGTATAGAGGCGTTCCTCTTAAACAGTAGTTTACTACATCA CGGAGAATGGACACCACAAGTCATCAACCAATCCGTTAACAAATGGGTTG AAGCAAACAAAAACCGAGACACAAAAGCCGTATTACGACGCCGTACGACA ACTATGTGTGCAACAGTCGCTGACACCGAAATCGGGAAACCGGTTCGCGA TTCCGATCCGTTAGTCCGTACTGGGCGAATATTCGGTTGTTTGGTGCAAG ATGTGAAACGGAAACTACCGCATGTTAGAAGTGATTTCACGGACGCGTTC AATGCGAGATGTCTTATAACAGTCGTATTGATCTATTTCTCTTTCATGGC ACCTGCTATCACATTTGCAGCGTTAATGTCTAAAGAAACTAACGGATTAT TGGGTGTTTCAGAAATGATCGCCGCAACATCAGTCAGTGGTGTTATCTTC GGTCTTTTCTCCGGTCAACCGCTTATCATTCTTGGTGCTACCGGACCTCT TCTAGTGATGGAAGAGAAAATCTACAATCTGTGTCAAAGCCTTCAGATTG AATTTCTACCATATCGTGTTTGGATTGGATTTTGGATCACTATTTTCTGT ACGTTAATAGTGGCACTCGATCTTTCATATCTGGTCCGTAAATTTACTCT CTTTACCGAAGAAGTTGTAACAGCGCTTATCTCTACTGTCTTTATCTACG AATCTGTTCGCTATATCTGGTTAAACTTTTCCACATACTACTTCCCTAAT CTAACCTTGACACCTACTTCTATTATCAATCAAACATTTTTGAACACAAC AATAGAGAATGGGACTTTGTACAACACAACTCATGGCAACTCATCAAATA TCGTGGTAGGGAACAATACAATTATCCAAAATGGTATCGATAAACGATTT GAGGTTGCCATGCCATTCCTGATCACTATACTCATGATGGGCACCTTCTT GCTCTGTTATTACATCAGAAGATTACGTCATAGTATATTCTTCCCAGCTA AACTAAGACGTCTTGTCTCAGATTTCGGTATTGCGCTGGCTGTGCTGACA TTCGTTGCCGCTGATTGGTTATTGGATGATCAATTTACACCTAAACTCGA TATCCCAGACGGATTAACACCTACATCACCTTCACAACGGAACTGGATGA TCGAGTTTATGGATAAAGACAAGATGTTATCACCGTTGCAAATCGTAGGT GCAAGCGTGCCTGCTCTGCTGGTCACAATCATTCTTTTCATGGAAACTGA ACTAACAGGCACTATAGTTGATCGAAAAGAATACAAACTGAAGAAAGGTT CAGGTTATAATCTAGACTTGTTGATTGTCGGTTTATTAGCCACATTCTGC TCTTTATTTGGTCTTCCTTGGATGTGTGCATGTCCAGTACACTCGATATC TCATCTTAATTCATTGACAATATGGAACCCACATACACCGCCCGGTACGC GACCGCAAGTCGAGAGCGTCATAGAGCAACGTGTCACTAACATTCTTATC CATATTTTAATTGGTTTTTCCGTACTTCTTGCACCTATCCTACGTTTGAT CCCAATCGCCGTGTTATACGGTGTTTTTCTATACCTTGGAATAACCGCAC TTTCCCATCTACGATTTGTAGAACGCGTAAAACTTCTTTTCGTGGCATCC AGTAACCACCCGGACCGTAGATACATTCGTAAagtcaaaacaagaaaaat tcacTTCTTCACACTTATACAAATCGTGTGTTTGATTATTGTTCTTGTTG TCAAAAGCAGTCTATTGGCCCCTACCTTCCCGTTCTTCATTGTGCTAATG GTGCCGCTACGGAGCCAGTTGAAACGTACTTTTACAAAGGAGGAGCTAGA GGAATTGGATACCGATATCATGGATGATATAGTTGATGAAGATCTTGACG AGTATGATATAGTCCATGTACCAATGTGAAAAGAGTTGTATAAAGGacat taattttgcttttattatattttcctagtcataaaaaaatatttgaaaat caaattctttATGTCTAAATTTTTTCTCACATCCTACATTTCATCGACAC ACATATGCGCTTTATgctgttggaaagatatttttgagaacaATAATAAA TTTCGAAAACTTGAAACATCAGGATAGAAATTTAGAAATTATGACATGTA CCAGTTTGATAAAGtacttttaaattttagaaatgtttcaaagtttaaaa attatagTTATCAGATACCGTGGATCACTACTCCAAGGTCCCGAATAAAC GTCCCCCcgcttatcaatttttgaaaagttttctttaaatCTTTAGCTAC CACACCACACCAGAATAAtctaataaattaaaaaaaattctttcttgaaa aatgaaaaagaaaaatgacgatgaaaatcaaaatttatgttgtttcaaaa attatgacatCAGACTTTTTGGAATATTTGAACCTTACTGATATCAAATC TGTGTCTTTGTTGGATAAAAGGACTGCGGATTAAGTCATATTTATGCTGG GAAATTACATCTTTCAATTGGAAGTTTTCAGCCAAACTTTTGTGCTTGCT CCGCTCGTGTAATTCTTATGAACATACTTTACTTTTAATAAGGGGCGTCA AAATCCCAGTTTTTGATAATCGCCTCCTCAGTTTTGGCTGATCCACCACG CTACTGTGTCTACATACTTGTGAGATAGACTTTAAGTAGTTCGTTATGTG AGGTGCCTTTACCTTTAAACGTTATATTTTGAGAATGTTTCACAAAATTA CTTTCGACTTCTCAAAAATGACGTATCACTTTTGTAAAAATGctttataa gaaatttttgtttttggagAACTCTCCTGTTCAATGGGAAATCAACCGTT CCTTGAATGTCATTGCAAAGCTTTTCGCAGTGTCTATTCAAAGCGtccct tttatattgatttcGAGAAAGAAATATGCTTCTAGCAATATCATCAAgca gtgacgtcattttaatcTCATTAAAATGACCGTATGATAATGATCTTACT GTACAAAACATTGTGAAGCTTTACTGTAATGTAAAATGCCTCGTACACTT TAAACTTCCCCTATTGAATCGCATACCGAAATCGACCATTATCCTTTGTT AAATTATTGTAATGAACAATTAGAACTGATTAACCATGTCATTACTGTAC ACTATCAATCTGATAGAAGcctgatagttgaaagattgcAAGCTCTATTG TAATAaggaaaaaatttcatgtttttctaAAAGTGCCCAACTATCAACCA GTGTCAACCGTCAAGGTAGAAGTGTAAAATTCCCTTTGATTCTAGAAGTG TATTTAAGCCACAAAGGAAAAATGGCGACTCAAAAGTCATTTAGGGAAGA TATATTCAGACATGAACAAGAACAAGATGAAGTTATTCTTATTGGTCTCC TTAACTTTATTCGCAGTACATAGTAGGTTACTTTTTGTTGAAATAAACAT AGTGAATTCCACTGAATATTCGAACCACACTTTAGCCAAGCATTATTTTG ATACGTTTTGTTATGGCTGATTACTCTAGCTCACTCTCTAGTTCGATCTT CGGTTATTAGTCACAATTCAAGTCTGTAAAACTTTCAACTTAAGGGAACT ATTTTGCTTTATTTCGAATTTAAAACAAGATGACAAGATAGTCATTCATA GCCACAATTCCTCCAAAAGACTTCAgcaattttcttttctcttttagcAC GAACATGCAACGGTGGTCTAGCAAAGAAACTACGCACTTTGGCGCTTGAA TATCAATCAGGCAAAACATTGGCTTATGAAGCACTGGAAAAGCTGGTAAG TGCATTAATCacaatcaatcaatttttgaatgcACCTTcttgaccgtagt cgcgcggccAGGTGCGTGCCACTTTATAATCTAATTATCCCCCTGAGCTC GATCCAATCCTcttttacacctttttttattgtCTATAAGTGCGAAAAAT GCTTAATCTTAATATGAAGTGCTCTACATCTTCAAATCTTTGGATATTGA AACCCGTAAAAAAGGAGATGGCGGTGGTGATGAAACGCAGGAGATGACAG TGATATATTGCCCCTCATATATACGAGATAAGATTATGTATTGGAGGCTG CCCAAACTGTAGTACCAtatatttataaagcccgaagggctacaTGACGT GCTTTTGCTGAACTGCGTACTTTTCtcgggtttttgaaaacaatattttt tccgatattcacttttttttgcctgcaatGGCTTagagcacgacatctag cccttcgggctttacaaatcAATGGTAGTACCCTACAGTAACCACTGATA AATTTGATTAATGGTTGAGTGTACTAGTCTgagaactttctaaaaatatt tattttcatcttctttcTATAGGAGACGGACGTggaaattaagcaaaaat atttcccgAAAGACTTCAGTGCGTGGAAAGTAACTCATCAGCAttatttt tggatgaaatttgtcaagaaaGCTTTGGAAATCTTTCAAAGCAAGCTAGC AGGTGGCTTCAATCCCTCCTTTCGAAACGAAACACGGGGGTTGTTCTATG TGATGCTTCGAAATCAAATCGGCAACGTCACAAAGATGGCAGAGGTATGT TAACTCCCACAACACCTTTTTATGTTCATTTTTATGAGCCAAATGATTAA AACAACGAGTTGagttttttcgcaaaaaaatgaTGCATGATAAAAAGGAT TTTGAAAGCAACGTAGGACTTCCTCTTTTGGATGGCTTTTTTATCGGAAG TAAATATGATAATTTAAAATCCGCCGTCAATAGCTATGTCTAAAATAACC AAAACCAGAACGGGTAAATTAAGCCCAATTCAAGGACTTGTAATTTCAAG TGTAAAATAGATATAATGGTTTGTAATTAAGCGATAAATCAACGAAGCTG AAAGTTAACGCATGAATATTTTTGGcccaataaaaaataaaaatattcat tttcatATCATTCTTGATCTTTTCAAAAGAAGCTTTAGAACTGTCCACTC ATAATTACCTTTTTTCAACGAGGCATTTCTTATCTATAATGTAAAACTGT AAATATGTATTTACAACGAGTATTTAGAGAATAAAAATAAGTTATATCTT CAAGTTTTAATACCATTATTTTTTGCAGGTCTATCGGCGGAAACGCACTC TATCGTTctccaaaaagtttgaaaagagcATGAATAGGAATCTGaatgac tttaaaatttcattcaaaaaagaCTTGCTTCAAAAGTATCTAAACGTTGG TACAAGCGACGAAACGAGGTATCGTATTTTACTGCAAGAGTTGGTCACGT TTTTCAATGTCTTTATTTCACATAACAAGAAAGGAATCAAACGTCTCAAA AGATTTGGTTGAGTAAATTTTGGAATTAATGTTACTATACGAGGAAAATC AAGTACTCTTGGGCTTCAAGACAATCTTTCAATTGAGTGCATGGGGTCCA TGAtcagctatctatgaactgaacggattATTGGAACGGCCAATCCttgg tttgagacgctgacaGTTTaatcacagatctgtaaagcccgaagggctag atccacggcctttatcgaaaagtggagcaagttttggtaggattttctac caaagaaatcacgtgacaacaagcaatttcactggtttgagaaatgcgaa atagcgtttgccgccgaATCTAATTAAAATGCTACATCCTATCCATCGGC cctaaatttaaaaagtcaaatttttgattcacttttttttgctggagaaa gcttattTGAATTAAATCGTTGTCATATTTATAATTGTAAATAGTATTGT AAAAATGTAATATTTAATACATATTTTTATACTTGGGGTTCGATTCGAAT TAAATCGTTGTCATATTTATAATTGTAAATAGTATTGTAAAAATCGTAAT ACATAATACATATTTTTATACTTGGGGTTCGATTCGAATTAAATCGTTGT CATATTTATAATTGTAAATAGTattgtaaaattgtaatatataatacata ttttTATACTTGGGGTTCGATTCGAATTAAATCGTTGTCATATTTATAAT TGTAAATAGTattgtaaaattgtaatatataatacatattttTATACTTG TACTTTTTGTCTAGTTTTATCATCTTATTTTCTCAGCTTTGCTCCCAGAG ATGTTTGGGGTATGAAGAATAATCTTCAGTGGTCGTAGTTTAAAGGTAGA GAGCATTTGGCTACGGTAGGTAACGTCGTTGATTCAATATATGGCTGGGT CTTACCAAAGATTACCAAAATGGTACTCGATATCTCTCTGCttaatgctc agcaactaaagacacccctgtctcacagcaccggtggaacttttttcctc agcgggggataaaaattcctattgaaatttcaatgggaatagaaaattta ttgttcaaaggataaaaaatccagtgggatggttttggagtgcaattttt aaacatttaatttcgagtgtggatgaaatataagtcaatttcccagtgcg GCTTAAATTCCAGGGTATTCTCCTACCGGGGATgaaatttttgccagatt ttctagtggggctgaggtcccagcgggtctgtgacacaggggtgtctaaa GAGAAAGATCAAGGCCAGTTGGGCAATCAAGGGAGAAAATGTGCCGCCTG TAGGGACCTTCTGGTAGACAGTGATGGATTGGAGACTTCTCCTCTAATTT TGGTCACAAGGCTTACATTCTTGTCTCCTACTACCGTAAGATGCTGCTAT GTATTTCAGTATTTTTTTACTGCCAAAGAATAAAAGCAATTTTAGAAATC TTATACTCGCAATTCTTTCAAACAGACATACTTCTGTAAAGCCCCCGAAG GGCTAAATAGAGTGCTTTAACCTTTccgagcaaaaaaaagtgaatatcgc aaaaaatattgttgatattGTTTTCGATAATCCGCGAAACTTCtaattgg tcaagcgctgaaattctattgtgatgtcacgtgacctaggtaggactTTC TTTCAAACCACGGTACCCTTTTAAACCAAAGCACGTCAACTAGtcctttg ggctttataaacCTGCGGTTAAACAGTGCTCTGGGATGTCTTATCATCCT AAACTAGGAAGTATCATCGCATTGATTTCTCAGAAAGTTGTCCCTAGAAA TTTCATCAATAAATGAGACCAAATTAGATTTTAATAGCTCAGCAACGACT GGTTTAGAAAATCCTTCAAACTATTTTAGGGCCGtcaaatttattgaatt taCCGTAGCGTAGGCAAtcaacaaatcaaaatacacGAACTTGATGTCCC CTCAATTACTATTGCATCAAGAATTTTTGACTATTTAAGCAAATTTGTTA TGTATTTCTTCTCCCTAGAGTTCGTTGATTTCCtcctttttttacaaatt ttttttatcagacCTGTCCATGCCTCATTAAAATTCCTTCGTATACTAAA ATGATTTtatgagttttgtttataaaaagtGGGATGTTGTGTGTAATATC TGTGTTTTTAGATTAATCCTATTTAAGTCAGTTTTGGATTGAAATAGGAA GCTATCTATACCGATAAGCTATTAATTAATAGCATAGTATAGTAACCAAG GTCAATCATTTTATGAGAATTACTCATCTCTGCTCCAGGACTAGACAGGC CTCTANAGAGCTGTATTAATTAATAGCATAGTATAGTAACCACCCAGTAA CCAAGAtcaatcatttttatgagaGTTACTCATCTGCTCCAGGACTAGAC AGGCctcatacacattttttttataagaacaaactatataagaacacaag gcttcgatggccaaaatgttaagaacaagtaaagaacattttaagccttt gTGAACTCTAAAACAcacgatttcttaggaaatcgtggacaaaaatacac aaaaatggggaaaataagaacatgttaagaacatttttagacataaaact caaaaaagttaagaacacttataaaaaacgtgtaagtgtATAGTATAGCA ACCAATCTCTCATCTCTTCTCTGCTCCAGGACTCTACTGTAAAAAGTAGG TCATATTCGTTGTTTTTTGGTCATCTTGGTTGTTTATGTTAAGGTCGTTA AGTGATAGCTGAGAAATTGTCAACAAAGTAAAGTATCCGCACTCAAAAGT TACTCACCTCTGCTCCAGGACTAGACAGATCTCATAGTTAACTCGTCTCG AGTCATGATTCATTTTTAAGGCTAGGAAGTGAAGACCCGTTAAGTTTGAA GCTCTGAAAAGGGctagcccagctggcacacaacgttttttcgacgttta tataacgttcacaacgtccatataacgttaggtgaacgttgaaataacgt tgtgtgggAAGGGAAATCTTCAGCCATTTTCAAGCAAGGAAAAAAAAGAA GCCTTAAGTTTGTCctgcatttaaaaaattggtttgAAAACACACGAGTC ACGTATTCTggttgggaaataagtggcttcatttcccatccaggagtttc ggAACTAGCTCTTTCGGAGTTTTGAAATCAATGTTGAGACCACCTGGCAG GGTCCAAATTTTATCTGTCAGATTGTAACTTTGTATTACATGGTCTTATT TTTTGCTAAAGCTTTTTAGCAGGTTCTAGTGTTCTAGCTTAGGCAGCACG CGAACGTCNCGTATTACTGTACATGGTCCTATTTTTTGCTAAAGCTTTTT AGCAGGTTCTAGTGTTCTAGCTTAAGCAGCACGCGAACGTCGGTCATCAA GCCCTTCCTGGAAAACTATGTATGATTCAGGAcactttcatatttttttc caatGGTGGGGCTCCTTCTTATGAATTTAGCATtaaaaatatattagaat tagCAGTAGACTGACAGTAGGCACATTTTAAAACATTAccttcgaagaaa aaaaaggttttttttattgaGGCCTCTGTGCCTGCCTATCACaattgtct tttttataagcgaTTTAATCTTTGTTAAATACAGTGTAAATTGTCATAAC GAAGCATTTTACAGAGAGACATCTGTAACATACTGAACGACTGTTGCGTT TCTATGCGTAATCAAAAGTTTTTCTTGGTATTTGACGAAAATAAATTACT TGGTTGGCGTCATCAATGGCATACTACTAAGGAATTTTTCAATGCTATGA TAGAACCCAAATAATtggttttgatttcttttttctctaCGTAAATGCTA CATAGGCATATTATGCGGTAATTGTCGACTTAAAGATACCGAGAAATAAT ATTTAAAAGCTTTTGTAAGCTTGCGGTGAAACATTGAATAATGATTTAGC CTGTGACAGTCAAATCTCCTTTACTGATTTTAACTCTTGTAGAGAACAAG AATTGATAGTTGGGTGCAGGCAAGAACATCTCCATTGAATATCTCCATTT CTAcatcaaaaactgatttttcagTGATAAAATTCgtgaagttttgaaat taaCGAGATTAAACCCTCATAAAATCAGAGGTTCTAAAAGCATTTAGCAC TTTTTCTAAGATTTAtgaatgatttttgattttttgcattgtTAGCCCTG ATTCTGAAATACTAAAACCTTATAAACTTACAAATGGGAATAAACTTTCG TTTCGTTTTCTGAAAAATAGCTGATAGTTGAACATGCACTGaatgtcccg ggggggggggcacttaggcaaaattgggtacagTTTCGTACCGCTGGTCA CGGTCCCTTGTTTAGGCtctaagggtcccaaatttactaactTTCAAGAT GTATCTAACAAGGTCaacttttgaatgtttttacaattttcagggaaatt cttttcgattttttgttcTAATATACAGGACCTTGTATTTACCAAACATT TATATCCGACAGGGTCGTCTTTTTAAACTGCAGTGACACGTCCCCGTCGG AATTTAAGGTTACAATATTCTCGGGCTTTAAATCAAAATTCTTCTTTCTG GCTCAGAAAAGATACACCCTGTTTCAACTATTCAATGATAGTTGAGAATT CTGTAAGCAGTAACAAAAGGTTTAGTTGATGTGAATTGGGGCCAATTAAC ATCTGAGTTTTATCCCGATAACTTTTAGTCAGTACAAAGAACACTTGTTT ATTGCATCTTCCTGAGTGGATTTTCTCTCGAAAAGTCCTAGTGACAGTCC CCAGTTattgaaatggaaaaaaaatcgttttcagCTAGACTTTAAAGTAT GATGTAATCTTGAAATGATATCAGAGCTCAACGCTCAGTCCTTTTAAAAT TGATCCAAAACAGCTCCGTATACCGCTGAGATATACAAGTAGGAAGTAAA GCAATCCAAAGCAATCTATGCAAGctattataagaacattaaaagATTGC TAACATTTTTTCTAATAATTACGACAAGGTAGTTTAATTTGATTGGaatg tttctgatttttttctctgacTTTGCTGATAGCTAATAGCTGAGATATAA TAGATTTCCTAGAAAGGNTCTGACTTTGCTGATAGCTTTGATAGCTAATA GCTGAGATATAATAGATTTCCTAGAAAGGACATACGTAACATACTAGTAG AGAGGTCGATACCACGAGGAAAGAGAAGTAGTTTCGCCAGACTAGTATAA ATAGCACCCAAGAATTGCTGATTTTAAACATAGAGAAATTAGTCGAAATT TGAACTGGTCGAGCGAGGATAGAGAAGTCGTGATGAAGTTGATAGAATGT ATTTTGGTTTTGGCTGGTGAGTTTGGTTTTGAATTGTTTCTCTGAAGTAG GAATAATAGGTCGTGTATTCTTTGTGACAGGAGAAGACATTTGATGTTTT TGACGAGAGGGTAGCAATGTAATGTTACTTCGGTCTTGTGTAGCCTAACA AAGTCAACTCCGCCTTACCAAAATGACGGATGCACCCTTCCCTCATGTAT CGTCAATCTGACATATATTTATttagcagacctatactacctggggtttt gtagaggtctgcgattcagacttaagatattttaaaattggGTTGGTATA TTGTGCGACCCAAtaacccgaaggctcctctttcgatagctatctaccct cGAAGGCtttctcacttttttttgtATGATTCAACGCCCTCTGCTGCCAT CTTTTCCGTGCCTTTTTCCGTATTACCAAAAGGCTGGACAAATGATAAAG TCGCATGGCCCCCCTCGTATACTAAGACAAGCACTATGatattttcgttt attttctttcttcagtTATGGTCAATACATGCGAAAGTCGTTTCAAGTTA GTAAAGGTATTACGTAAATTGAATACCGAGTACCAAAGAACAAGAGATAT TTTATCAAGCAAAGCTTTAGAAGTGGTAAGTGAAATACCATTTAGTAGTC TTCAAATGCCGTGGTAACTTCTTGCTAGATTTTCTACAAAATCAGTCGAT TCACTTAAAGGAAAATCATCACAGCCGNTTAGATTTTCTACAAAATCAAT CGATTCACTTAAAGGAAATCATTTAACGCATCATACCTACAATTTGCTTA CACGGtgttttaaaaaaagaagaactcTTCCTCCCGTGCCAAGCGAACAC AAATTGCTTTGTCAATTCTGCTTCATCAGCATAAAGGCGAGCCCCTTGTT ATATCGTAAAAAAGAATAAACTTCAAATAAGTGAATTGATACCGAAGCAT GGTGGGTTCGGGTAAATGGAGTCCGTTGACTTGCCATTGACCTTTttaaa tatttggaaaaatctCTAAAAGGTCGCAAATTCACTCAGCTTTCAAAAGT ATATCTGAAGGACTGACTTTTCGGTACCTTTTACTACTTTTCATCAGGGA GCATTTGTTGAAAACTATATGACAGGGGTCCATCcctttttgatagaatt tcaTATCTAACAGGGTCTTTTTTTTCGATTCTTACCCTCATCTAGATTTG TGACTTCTAAAAAACCATAgacttctgctcatcctctagtgAAAAGATTT CTTATATAGGAAGTAAATCTAGAGGTCTGTGATTTAGACTCCAAAAACCA TTGTGAGGGGTTTGTCCTGTTAGTCGGCAAGGGTAGCGCATGCTTTTACT GCTGTAAGCGATTCCTGATGTTAGCTTCTCTAAAAAAGAGGCTTGGTTTA AATTATAACATGGTTAAAatactaaaaactaattacttGTTTCAAAAGTT CCACGCTGTACAATTTAGGACCATCTTAGATTGACCCATTATAACTAATT TGATGTAATCATGCGGCATCATAAGTAATATATATCTATCTAATTAGTCT AGAAACATAGTTCCTTCTCTCTTTCTAAACTTTTTCTATTTATATCTTTT ACCGTTGGAGACAAGGCAGAGAGAgttattttttatgctttataGCTTTT CTTCTTTTAACTCAGTGCAAGATTCTCATAATCCAACAAGCTTCTACATA CTACATACACTTTCACATAAATAAGCAATTCTAGCATATTACCCATCAAA ctataaacctttttttttttttaaagtggtcCCTCTGTGTTGGAGCTATC AATCAATCttgtacccagagccacttgctctactttttggtttttctaat AAATGTTGGTAAAATCCTTTCGGactcagagttaaaaatctacccttcga acctactttagagcacttacaaatcgattgtggtttcaaaacaccccggt gaatttcccttttgtgccaaatatTTTGTCCCTGATTGTGgagtttttac aagctcttatgtgatttggttggtcgttaagatgtaataaatacaatttt attacattttctaaagaacgcgtcatctatattacttcaaatgaccaatt agtgaagtatcttataaaaactccagctcgtCGCTTTTTTCTCTACAGGC AATTCTTGGTGATGGCAAGAAGATCGATAAACGAATGGCATGTTTAAAGA CGATCGAAATACCAACTGAAGAAGACATTTTCACCGAAAAACCACCCGCT AAATTGATCGGGGTAAGTTTTTATCCTCGTAAACAGGCTTTTTAGTGCCG TTAACTAGCGTCGTTGTATCGTTACTTTGACAATCTTACAAAAGTTTAGA CTGAATTAATAAAGTATAGCCGAAAAGTAGATTGTAAATTAAAGTACACT CCTTTAGAAGATATTTGCTCTTCCAAAAGGGTGTTTTAAATTACATCGGA ATAATCTTTTTCAAGAATACGAAAATGATTGCCAAATTCATATAAGAAAT CTGTTAAAAAATGGTGTATCCAGTCAGACGATAGACTACtgctggctgaa ctttgctttttggtgatttttgatGAGGCTGAGTTCACCGCCattcagtc tatcaaaaagctttaattggaccccgggctagtcaaaaaaaatgaaaaca tagtttATAATAAGGAATATTATCTAGGCCACGTGGATATAAAAATACTT TAACAGCAATATTGATGGATATCTTTCCTATCAGCAAAATGATAATCACC CAATTTCCGCTCTCGTGTAGCGTGCAGTATAAAAACAATTTCCGGAGGGA GCTTTCCCTTGCTTTTTCTTCACTGAGggagaaaaaaaactgaaaaaaat aatatgctGAGTTTGTTACTTTCGTTAAACACAGGAAATCGGTGATCGTA ATAACTGCCAAACATCCTGCTATCCTTTTTGGCATTTCggttttaagctt ttttctGATTCGGAACATTTTTCCTCAATGGGGGATAAGAATCCCTATTG AAATCCcgatggggataaaaattctattgtttaaaagttaaaaaatccag ttggAATGGTTTcggatttttaaacatttaattccaagtggggataaaat ataagtcaatttcccagtggggctaaaattccagggtattttcctatCGG GTACGAAATTTTTACTGGGGTCCCAGtggatctgtgacacaggggtgtat gagACAAGCATGAactaataattatttttcttttagaaaCATTACCTACG ATTAAACTTCAATAAGATAGTACTGGAAGTTTTCAATAAAGAATTACAGA ACGGATTTCCACTCTTGAATACTCTACCCACGGAAgatggaaaaatagaa aagctgagagaaattcaaaatgaaatccagaAGAGATTGAAAAACCAGAC CAGCAATATTGAGAAACAACTTGAGGTTGGTACTTTATTACTCATtctaa aaaatggttttttcctcaatttgattttgagcACATATCATTAAAATGCA TCCTTTTTAGCCTAAACCGTGTAACTAAGTCTCAAAGGACAGCCAGCCTA TTCCAAGCCATTAATTACAAaggaacacccctgtctcacagccccagtgg aatTTTTTACCTCATTGtggataaaaactcctattgaaatcccaatgggg atagaaattctattgtttcaaggttaaaaaatccaatggGGGATGgattt ggagtgcaatttttaaacagtCCAGTGGGACTAAAATTCAAGAGTATTTT CCCaccagggaagaaatttttgttaaattttccagtggattGGGGTTCCC AACGGGTCTGAGACACAGGGGTAGGGGTGTAAAGGATAAACAACCGAGTA TTTGGAAAGTTATACTTTAGAAATTGTATATTTATGGTCCTAAAAATCGt tatttccttcatttttttagtTATTCAAGGATGCTGCCAAAATTAATGGG CTTGATATTGCATTGACTGAACAACAagcttttaaactgaaaatcaaact acaattcattgaaatgaaaaatgaaaaggaatATTCAGAATGTTTTAACG AATTTGCAAGATTACGACAATTCTTCAATAATTTACGATACTTTTACGAA GATTTTATTGCGGATGGCAAAGTTCGTATCAGACAATGCCGGTTATTTGG TTGATGAGAAAGCGACTTGTGATATTTTGTACATTGTATCTTTTAAGGAT TTTTagtattatttattttataggGTAATTTATAATTAAAGTCTGTTCGT CTGACCTCTTGTGCACACTTAtagtgaatagactttaggaatcataattt aggtaatataatataatatttataggagaaaatagaaaaataaaattcgt tTTTAACATGTATCTGGAAGAGCAGAGCAGAGCAGAGCAAAGCACATTTT GATGTAATACTCTGCTCCAGGAC

Coding sequence (CDS) from alignment at scaffold_331:913404..929876+

>TCONS_00059846 ID=TCONS_00059846|Name=TCONS_00059846|organism=Clytia hemisphaerica|type=CDS|length=2580bp|location=Sequence derived from alignment at scaffold_331:913404..929876+ (Clytia hemisphaerica)
ATGGTCAATACATGCGAAAGTCGTTTCAAGTTAGTAAAGGTATTACGTAA
ATTGAATACCGAGTACCAAAGAACAAGAGATATTTTATCAAGCAAAGCTT
TAGAAGTGGCAATTCTTGGTGATGGCAAGAAGATCGATAAACGAATGGCA
TGTTTAAAGACGATCGAAATACCAACTGAAGAAGACATTTTCACCGAAAA
ACCACCCGCTAAATTGATCGGGaaaCATTACCTACGATTAAACTTCAATA
AGATAGTACTGGAAGTTTTCAATAAAGAATTACAGAACGGATTTCCACTC
TTGAATACTCTACCCACGGAAgatggaaaaatagaaaagctgagagaaat
tcaaaatgaaatccagaAGAGATTGAAAAACCAGACCAGCAATATTGAGA
AACAACTTGAGtTATTCAAGGATGCTGCCAAAATTAATGGGCTTGATATT
GCATTGACTGAACAACAagcttttaaactgaaaatcaaactacaattcat
tgaaatgaaaaatgaaaaggaatATTCAGAATGTTTTAACGAATTTGCAA
GATTACGACAATTCTTCAATAATTTACGATACTTTTACGAAGATTTTATT
GCGGATGGCAAAGTTCGTATCAGACAATGCCGGTTATTTGGTTGAATGGT
CAATACATGCGAAAGTCGTTTCAAGTTAGTAAAGGTATTACGTAAATTGA
ATACCGAGTACCAAAGAACAAGAGATATTTTATCAAGCAAAGCTTTAGAA
GTGGCAATTCTTGGTGATGGCAAGAAGATCGATAAACGAATGGCATGTTT
AAAGACGATCGAAATACCAACTGAAGAAGACATTTTCACCGAAAAACCAC
CCGCTAAATTGATCGGGaaaCATTACCTACGATTAAACTTCAATAAGATA
GTACTGGAAGTTTTCAATAAAGAATTACAGAACGGATTTCCACTCTTGAA
TACTCTACCCACGGAAgatggaaaaatagaaaagctgagagaaattcaaa
atgaaatccagaAGAGATTGAAAAACCAGACCAGCAATATTGAGAAACAA
CTTGAGtTATTCAAGGATGCTGCCAAAATTAATGGGCTTGATATTGCATT
GACTGAACAACAagcttttaaactgaaaatcaaactacaattcattgaaa
tgaaaaatgaaaaggaatATTCAGAATGTTTTAACGAATTTGCAAGATTA
CGACAATTCTTCAATAATTTACGATACTTTTACGAAGATTTTATTGCGGA
TGGCAAAGTTCGTATCAGACAATGCCGGTTATTTGGTTGAATGGTCAATA
CATGCGAAAGTCGTTTCAAGTTAGTAAAGGTATTACGTAAATTGAATACC
GAGTACCAAAGAACAAGAGATATTTTATCAAGCAAAGCTTTAGAAGTGGC
AATTCTTGGTGATGGCAAGAAGATCGATAAACGAATGGCATGTTTAAAGA
CGATCGAAATACCAACTGAAGAAGACATTTTCACCGAAAAACCACCCGCT
AAATTGATCGGGaaaCATTACCTACGATTAAACTTCAATAAGATAGTACT
GGAAGTTTTCAATAAAGAATTACAGAACGGATTTCCACTCTTGAATACTC
TACCCACGGAAgatggaaaaatagaaaagctgagagaaattcaaaatgaa
atccagaAGAGATTGAAAAACCAGACCAGCAATATTGAGAAACAACTTGA
GtTATTCAAGGATGCTGCCAAAATTAATGGGCTTGATATTGCATTGACTG
AACAACAagcttttaaactgaaaatcaaactacaattcattgaaatgaaa
aatgaaaaggaatATTCAGAATGTTTTAACGAATTTGCAAGATTACGACA
ATTCTTCAATAATTTACGATACTTTTACGAAGATTTTATTGCGGATGGCA
AAGTTCGTATCAGACAATGCCGGTTATTTGGTTGAATGGTCAATACATGC
GAAAGTCGTTTCAAGTTAGTAAAGGTATTACGTAAATTGAATACCGAGTA
CCAAAGAACAAGAGATATTTTATCAAGCAAAGCTTTAGAAGTGGCAATTC
TTGGTGATGGCAAGAAGATCGATAAACGAATGGCATGTTTAAAGACGATC
GAAATACCAACTGAAGAAGACATTTTCACCGAAAAACCACCCGCTAAATT
GATCGGGaaaCATTACCTACGATTAAACTTCAATAAGATAGTACTGGAAG
TTTTCAATAAAGAATTACAGAACGGATTTCCACTCTTGAATACTCTACCC
ACGGAAgatggaaaaatagaaaagctgagagaaattcaaaatgaaatcca
gaAGAGATTGAAAAACCAGACCAGCAATATTGAGAAACAACTTGAGtTAT
TCAAGGATGCTGCCAAAATTAATGGGCTTGATATTGCATTGACTGAACAA
CAagcttttaaactgaaaatcaaactacaattcattgaaatgaaaaatga
aaaggaatATTCAGAATGTTTTAACGAATTTGCAAGATTACGACAATTCT
TCAATAATTTACGATACTTTTACGAAGATTTTATTGCGGATGGCAAAGTT
CGTATCAGACAATGCCGGTTATTTGGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037641XLOC_037641Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059846-exon-scaffold_331-1491911889:913404..913485TCONS_00059846-exon-scaffold_331-1491911889:913404..913485Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1510915933:913404..913485TCONS_00059846-exon-scaffold_331-1510915933:913404..913485Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1575043694:913404..913485TCONS_00059846-exon-scaffold_331-1575043694:913404..913485Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1491911889:914042..914381TCONS_00059846-exon-scaffold_331-1491911889:914042..914381Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1510915933:914042..914381TCONS_00059846-exon-scaffold_331-1510915933:914042..914381Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1575043694:914042..914381TCONS_00059846-exon-scaffold_331-1575043694:914042..914381Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1491911889:925969..926078TCONS_00059846-exon-scaffold_331-1491911889:925969..926078Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1510915933:925969..926078TCONS_00059846-exon-scaffold_331-1510915933:925969..926078Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1575043694:925969..926078TCONS_00059846-exon-scaffold_331-1575043694:925969..926078Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1491911889:927602..927715TCONS_00059846-exon-scaffold_331-1491911889:927602..927715Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1510915933:927602..927715TCONS_00059846-exon-scaffold_331-1510915933:927602..927715Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1575043694:927602..927715TCONS_00059846-exon-scaffold_331-1575043694:927602..927715Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1491911889:928690..928878TCONS_00059846-exon-scaffold_331-1491911889:928690..928878Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1510915933:928690..928878TCONS_00059846-exon-scaffold_331-1510915933:928690..928878Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1575043694:928690..928878TCONS_00059846-exon-scaffold_331-1575043694:928690..928878Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1491911889:929374..929876TCONS_00059846-exon-scaffold_331-1491911889:929374..929876Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1510915933:929374..929876TCONS_00059846-exon-scaffold_331-1510915933:929374..929876Clytia hemisphaericaexon
TCONS_00059846-exon-scaffold_331-1575043694:929374..929876TCONS_00059846-exon-scaffold_331-1575043694:929374..929876Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059846-proteinTCONS_00059846-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:913404..929876 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0744463 0 0 0.228985 0.0930507 0.141164 0.235766 0 0.453424 0 0.43332 0.194617 0 0 0.0116846 0 0.4675 0 0 0.107669 0.166785 0 0.269248 0.396651 0.571575 0 0.146987 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059846 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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