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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059922 ID=TCONS_00059922|Name=TCONS_00059922|organism=Clytia hemisphaerica|type=transcript|length=1785bp gtcCGTTTGACCACGGATAAAAAGAAGGCACTCGAGGTCTGGAAAACACA TggccaaaattcaaaacaaaaaaacaaaaaaatctcacGTCCAACGTCCA CGCAGCTgaaaaatacttgaaaatactaTACTAAAGATCATGTCCAACAA ACTGAATATCTTGAATAAAATAATTGACTGTAAATATGAGAAAGGACAAC CTTATTATTTGGTCAAATGGAAGCCATCTTGGGAACCAGCAGATAAACTA GAACCGCTTTTTCAAGATTATATCGAAGACTTTTGGGAAAGGATAAACAT TTGTAAGGATGCAAAAGATGGAATACTACGCCCTCCAAGAAAGAGAAAAA GAATAGAGGATCATTCAACCATAGCACCAACGATAAATGGTACAGACTTC ACACAACCAACGCAAAATAATAACACATCACAGaacaACTTCACAAATAA TTTTGGTCATCATGTATCAGGACAACCGATGATGCAAACACCTAACCAAC CTCAACATATAAATCAACATCACCACCAGCAAGCACAACAAAATCAACCA CAACCCCAACCCCAACTACAACACAGTATGAACCAACTGATGGGTTTTAC TGACCAACAAAACATGGCCGCTGGTGTCGCTAGCAATCTTTTTCAAACAG GTCTCCCCTCACCAGGAGGTGCTGGCGAAAAGAAGACTCGTGGAAGAGGC CGAGGTCGGGGTTCCAAAGGACGTGGAGGTCAGGGTCGTGGTGGTATGTC AAACAACATTCAACAACAGCAGCCTCAACAACagatgatgcaaaatgata tgCAAAACTATGGTGGTGGTATGGGTGTTAGTCCGTTTGGTATGATGAGC CCTGCTCAATCACCTGGTGCATTCAACTTTGACACCAAACCTGTTATAtc acagcaacaacaacaacaacatcaatCACTTCAAGATATTAAACCAACCA TCGGACCAGGGGGAGTCATTGTTGACCCTTATCAACAACATCAACAAATC TCTCAACCTCAACCAATTATGCCGGGCGGGATGACTTTTGGAGATTCACC ACGTGGCAAGGGAAGAGGTGGTGGTGGAAGAGGGCGGGGAAGATCGAGTT CAACTGGCGGCGTGACTCCCataaaagaagaatttaaaGGTGAACCAGTT GCAGGCGAAGAACTGAAAATCTTGCTGAACAATGCAGAGAATTACCCTGC ATCTAGTTACAAAGACGATTTAAAAGTCATTGAACAGTGGCAAAACCCTT TCGTACGCTTACTTCTGGCCTGTCGTGTTTGTAGTAAGGAACAGAAATCC ATGAACGTTAGTACATGGAAAATGCACTTTTTAACACACTCCAACAAAAA ACCCTTCAACTGCAGTGTCTGCCAAAAGGGGTTCGTCCAGCAGACTGCTT TTAAAACACACATGAAAACAAACCATCCAGAAATGGCTGCAACCACCCAA ACGCCGCAACAAATGCAAGCACCTCCGCCCATGCCGCCTCAAATGCATGG TGGATTTCACGGGCAGTTTAAAACAGAATAAAGAATACTTTTTGACGtct aaaagtcacaaaatcaaGCTCCCCCTTGGGAAATTTTTATATTATGGACA TGTAGATGTGTAGAGGGCTCAGAGAAGCTCACCAGAAAATGTAAAATAGT AGTCTTTTTATGTCTATATTTAAAGAGATTTATATACTGTATGTATTAGC GTAGGATGGGTTTCTGTTGCTTTCTACAAACAAAAACGGAGTAAAACTAC AAGGTCGGTtctaaaatttagattttagttTTTGG Run BLAST on NCBI transcript from alignment at scaffold_331:1096292..1103619- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059922 ID=TCONS_00059922|Name=TCONS_00059922|organism=Clytia hemisphaerica|type=transcript|length=7328bp|location=Sequence derived from alignment at scaffold_331:1096292..1103619- (Clytia hemisphaerica) GTCCGTTTGACCACGGATAAAAAGAAGGCACTCGAGGTCTGGAAAACACA
TGGCCAAAATTCAAAACAAAAAAACAAAAAAATCTCACGTCCAACGTCCA
CGCAGCTGAAAAATACTTGAAAATACTATACTAAAGATCATGTCCAACAA
ACTGAATATCTTGAATAAAATAATTGACTGTAAATATGAGGTAAAATATA
ACTTTATTATGGTTGCTTTTTATTTCATTTCATAATCAATCAGCCTTTTG
AGGGAGGGGGTGGCATCGGAATAACAGAATTACAGGATCAGGCTCTTTTT
AAACAGTATTCTAGGATTTAACGAACTTGCCAACTCTCATGCATGGAGCC
TGAGACTCGCGCATTTCAACATTGTCTTACGCAATTTTTGAAAAACTTGA
TTTCTGATTATGTGTTTACCGTAAGCTGCAGGACCCTGCCGACGCACCGG
ACTTTAACGAACACCGGACACGCAAAAGTCCGATGTAAAATGGGAATTTT
TTTACCACCGGACAATTTCTACACCAGACTTAAAAAAGTCGGATGTCCGG
TGTCGGAGAAGGATATTTTTCCCACCGGACAATCTAAACACCGGACATGA
CCAGTCCGGTGCGTCCGGTGTTTCTTAATTTTTTAAATTTTCACAAGGCA
GATCTCTAAAAATTGTTTGGTTCCCGTCATCCGACCGACCCTGATTTTTG
CTCTGAAGTTAGAGTCAGAGACCCCTTTTGCCACTTCTGGATTCCTAATT
GTCAACCTCTGCGTGCTCAGTGTTTGCAAGTTTTCAGCGCGCCAGCGGAA
AGTGAACCAAAAACTAGTTTATCCATGATTTCCCGATTTTTTAACCCGAT
TTCATAATTTGGACCTTCGTGGAAGCAGACCACGCTCGCGAAGCATCACT
TTCTAAAAAACAAGATGTTGCATGATGATTATGGGGCTCACAATGCAGGT
ACCTACAATGAACAAAGATGAGATGTATGCACAAAAAAATATTTTCGACC
GACCGACCCACTTTGTAAAGTCGAAATGACGGGAACCAAACAATTTTTAC
AGATCCGCCCAATGCCCTGTCACAACACTCGCTAAAAAATGGCTCTACTA
AAAGTCAGCCCTATTTTCCACTCGTATTGGCTGTTGTTCAAATCGTCAAA
TTCGGAAAATTGATCTTATGGTAAACACGAAATCAAATTCGATCGGCCTT
TTTGAAAAAACTCTCTCCAATTTTCCGATTTTTGGCCAAAATATTTTCTG
ATTTTAGGAAAAATATTTCCTTGATTTTCCAATTTCAGGAAAAACCTTTC
CCTGGATATCTTAGTTTTTTCGGAAAGAAGATTCCCAAATTTTTCGAATT
TCAGAAAAAATTTTCCCTGATTTTCTGAAATTTTGGGAAAAGTTTTCCTG
ATTTCTGATTTTGGAAAATACACCTTATCGGAAATTCCACAAAAACAATC
GCGCTAAAATGGATCCGTTGAAATTGGGAGGTAAACATAAATGGGACCAA
TGGTAGCGCAAGTAGCGCTAAAAGTTCCCGCGTAAAACAAGAACTCGTTT
GCTTATATCTGGCTTGTTTATTATATGTTCCTAAAAATACACTGAATTAA
AAAAAAACAAAAAAACAATGCTTTCGAGATGCTAGCACAAGCTATAAGAA
AGAGAAAAACAACAACTTCGGTGGTTTTTCAGTTGATTTGGAGGCTCTTT
TGGCATCAATATTTTGGGTGTTTTGTAAGGCTTTTTGCCCGTGTTGTGTA
GCAACAACGCAAGGAGGTGAAATTTCCGATAAGGTGTATTGGAAAATCTG
GCTAAGATTTCAGATTTCACTTGGAAATTTTTATCTCACGCAAAATGGAC
ATCTCAATTTGGCAGGTCTGAATTTGATTGAAAATACATTGGGAAAACCC
GATACGGGGATTCCACCATTAAATGTAACAATAAAAGGGTAATCAAGAAA
ATATTTCTCAGGATTCCGGTATTTAGACAAATTTCTGTTTGTTTATCACA
AAGTTTAGATGTAGCCCAGCTGTAACGTTGGTTCAACATATACATATATC
TGATGTTCACAACGCCCATTTAATGCTACATGAACGTTGAAGCAACGTAC
GTTGTGTGCCAGAAAAGAACAAGGCATTAAACATTTTGGTAATAAACAAG
TGTTGAAGTGTTCAAATCCCCTGTCAAACAGCCCTGGTGCAACATTTTTC
CACCTTGGGGATAAAGATTTCTTTTAAAATGAAATCCCTATGAGGATAGA
ATTTTTATTGCTCCATTGCTAAAAAATCCAGTGGAATGGTTCCATGTGGA
AAGGTGGTTGAAGGAAACGAATTAGTTTCAATGATGGCTAAGGCCACATC
TAAATATATTGTTTGTAATACATTAGTAATCTGGACATCTCCCCTTCCTG
GAGAGGTCATGGTCACTGTAGATAGTGTTCGGTTTCTTATACATTTCAAT
GGCTCTTTCCCCTATTGGCGGGGAGCAAGTGGTTGTTGTTCCAAGCAGGG
GGGTCAGTGTACTAGAAGGCGGCATGTATGTGTACTACAAGGTATTTTTC
AAAACTTGAAANAGTTTCTTATACAGTTCAATGGCTCTTTCCCCTGTTGG
CGGGGAGCAAGTGGTTGTTGTTCCAAGCAGGGGGGTCAGTGTACTAGAAG
GCGGCATGTATGTGTACTACAAGGTATTTTTCAAAACTTGAAAAATCCTG
GAACAACCCCATACCCCCTATTTACTACCAGGTAGTACCTGGAAAAAAAC
CAGACCACCTCATATCCCCATTTACTACCAGCTACNTATATTTACTACCA
GGTAGAGGTAGTACCTGGAAAAAAACCAAACCACCTCATACCCCCATTTA
CTACCAGGTACTACCTGGAAAAAAGCCCCAAACCTGCCAAACCACCCCGT
ACTGCCTACTACCAGACACTACCTGGAATAATGCCAAAATCACTTCATAC
CCCTGCATAAGTACCTCCATACCTTGTTTTACTAAGTTTACAGCTGTTTA
CAGAATTGTAACCCAGAGTGTAACAAATTGCACAGCCTTCCTTCAAGAAT
GCTAAATACAGAAAAATTCCTCCCAATATAATTGGTCCTTTACTTTGTAA
GCTAACCCAGATGTTTATGCAAACCAAAATATTCTTAAGAATTGGCCAAA
TTTGAGGGTGAAGAAATTATTTGTACTCTTATTCTTTGAGTGAATATTTA
TAGGTTTACGCACAAGGGCTGTTGAACCCAACTGGGGGTGCGGCACATCA
AAGGCCGACTATTATTCCTCTCCGATGGGAAATTGGCCCGCTCCTTTAGA
GCTTTAGCGTGGGCAGCCGCCGGTTGGATTAGTTGTATCATACGTAGTCG
AGTCTGGGGTATTACTCTACTACTGAGGTGTTGGAGAATCTTCATTATAT
CCCCAATAACTGTAATGCCCAGGTCTCTAAGGAATGATCTGTCCATAGAG
GGCAATATCTCTAATATCATTCGATTCTCTGTGAATCTCTTTGCATACTG
GTGTGCAGCTTCTTCTGGGATTCCAGCATCCCGCAGGTATTTTTCCCAGT
CTTGATCTGACTCTGACAGCGCCATGTAGAAAGGTGATTGAAGGAAACGA
ATTTGTTTCAATGATGGCTAAGGCCACATCTAAATATATTGTTTGTAATA
CATTAGATCTAAATGAAAAGAAAGAAGAATATATAAACTAATCTGAACAT
CCGGAATGCAATCTGTATTTCAAATGAAAATGAAATATAATCAATTTCCC
ACAGAAGTATAATAGTGGAGCTGAGGTTCCAGCGGGTCTGTGACATTGTT
TAATAAAGAAGCTTGTTTGAGAAAGAAAATCCTCACTCAATTTTAGATGG
CATGTGACACCAAAGGTGCAAATCTCGTGCAATGTAATGTGATTTCAGAT
TTTGGAAACAGGAAAAATTGAAAAAATTATAGACTGGCTTTTTAGAGCAA
AATGTGGTACTCTTCTTTTGACAGGTGAAATACTTTCAAAAATTGATAAA
CAGGGGTCTTGACCACTTCTAGAAAATTTTCTATCAATTTCACTTTGTTT
CTTTGTGTTATTTGTTACTCTCTTTCTCTCTGTTCTTCCTACAGAAAGGA
CAACCTTATTATTTGGTCAAATGGAAGCCATCTTGGGAACCAGCAGATAA
ACTAGAACCGCTTTTTCAAGATTATATCGAAGACTTTTGGGAAAGGATAA
ACATTTGTAAGGATGCAAAAGATGGAATACTACGCCCTCCAAGAAAGGTA
CTGAATTTGAAATGATAAATTGTCTGACACAGTTAATAAAAGTCCTGGCT
ATGTTAGCTTAGATGAAGAGTTTGATCCAGCGCAGACCTATTTTTTTCTG
TGTTTGTGTTTCGTTTTGACATGAATTTTCTATATCACATCAAAAAAATA
TTTCTTTAATGAGATGACTATCATTTTTTCAACAGAAGGTTTGTGCAACT
GTGCTATATAATGTTATGAGAAGGGATGTTTAGGTGTAATCTGATTCTAT
TGCCAACAGTATAAAACTAAAATCAGTCAGAGTCAGAGCATTTAATACCA
GGTTTAGAATTCTGCAATAGAAAGTGTTTTGTGATGGCAAAGCATTTACA
GGATTTTACTCGCTACTTCTTTCTTATCATTTCATAGAGAAAAAGAATAG
AGGATCATTCAACCATAGCACCAACGATAGTAACTACTTTTTTCAATACA
TATTTTTTTTTAGTTTTTTCCTTTTTCATTCTACGCATTCCAAATTTCTA
TTGAAGTGTCATTACTTTTGATATTGTTTTATTGTGCCTTACCACCCTTT
TATTACCCAATTTATGAGTATTTCAAACCTTGAGAGCACTCTTTTAAGCA
GGAGCAACTTTAAAGATTCCTAATTTTCATTTCAGAATGGTACAGACTTC
ACACAACCAACGCAAAATAATAACACATCACAGGTAATTTTCTTATAAGT
TATCGGCGATCCAAAAAATATCTGCAATCTGATTGGTTAAAAAGAGTACA
GTATAATATCTTGTATTTTACATGTACAAAATATAAATTGACGAAAAGAA
AAAAGTGCATTTCTTGGGTCACCGATAAACCAGTTATCAGACATTTGATA
GTACAATATGAGAAATATTTCACTCATTCCAGATTTTCCGTATATTTTCC
TCACCTAAAGGCTTGTACGGAAAAATCTCGGAACTCGTAAAATATTTCTC
ATATTGTACTCGCAACTGTCCGATAACTATTACTTATCACATCAGAGGCC
AACTTTACCTGGGGATTACTTTTTTAATGTCCATACCTGGATCAAATAAG
TTTTCGCGATATTTAATTTTGCATTTTTGTGAACTTCTGAAATCAAATCC
ACATGAACATTTTGCTTTTTTTGGCCCTAACGGGGTCGATTTAAAATTTT
TTTTCATAGAACAACTTCACAAATAATTTTGGTCATCATGTATCAGGACA
ACCGATGATGCAAACACCTAACCAACCTCAACATATAAATCAACATCACC
ACCAGGTTTTAAAATCTACTTTTTTTCATATAAGGGACATTAAAAAAGTA
TACATTTTTTCTATTTGGTATTTTCATACAATGGAAATAACTAGATTAAA
ATTTTAATTGTTCATTCGGTCTAACTAAATGAAGTAAATGGTGCTGAATT
GACATTTTTATCAACCCTAAAAGATGATCCAAAGAATCCCACTAGTGCCG
ATTATAAAGCGAAGTATAGTTTGCAAAGTCTCTTGGCTACTTGAATAAAG
GGTTGTTTTGAAGTGGATCAATTTTGTATGGACTTCGTGTGGAAAAAATT
TGGTAATTCAGCCTCTTTTTCACCCAATTTCTTTCATTTCTCCTAGTGGT
TTTGGCAGAAATCCTGACTTAAAAATTTTCGCGACGACTAAATTTCATCC
ACTCAATCTGTTTTTTACAGCAAGCACAACAAAATCAACCACAACCCCAA
CCCCAACTACAACACAGTATGAACCAACTGATGGGTTTTACTGACCAACA
AAACATGGCCGCTGGTGTCGCTAGCAATCTTTTTCAAACAGGTCTCCCCT
CACCAGGAGGTGCTGGCGAAAAGAAGACTCGTGGAAGAGGCCGAGGTCGG
GGTTCCAAAGGACGTGGAGGTCAGGGTCGTGGTGGTATGTCAAACAACAT
TCAACAACAGCAGCCTCAACAACAGATGATGCAAAATGATATGCAAAACT
ATGGTGGTGGTATGGGTGTTAGTCCGTTTGGTATGATGAGCCCTGCTCAA
TCACCTGGTGCATTCAACTTTGACACCAAACCTGTTATATCACAGCAACA
ACAACAACAACATCAATCACTTCAAGATATTAAACCAACCATCGGACCAG
GGGGAGTCATTGTTGACCCTTATCAACAACATCAACAAATCTCTCAACCT
CAACCAATTATGCCGGGCGGGATGACTTTTGGAGATTCACCACGTGGCAA
GGGAAGAGGTGGTGGTGGAAGAGGGCGGGGAAGATCGAGTTCAACTGGCG
GCGTGACTCCCATAAAAGAAGAATTTAAAGGTGAACCAGTTGCAGGCGAA
GAACTGGTAAATTTACTCTATTTGTTTAAAAAAAATTACTTTGGCCTTTT
TCATAGGGAGACGTTAAAGTTTGCTATGACTGAAAAATGTAAAAGAATTA
GCGAATTATCGTGATTTTCATAGCTAAGACTGTCTTTTTTTCGTTTTGCT
CTTTTTAGAAAATCTTGCTGAACAATGCAGAGAATTACCCTGCATCTAGT
TACAAAGACGATTTAAAAGTCATTGAACAGTGGCAAAACCCTTTCGTACG
CTTACTTCTGGCCTGTCGTGTTTGTAGTAAGGAACAGAAATCCATGAACG
TTAGTACATGGAAAATGCACTTTTTAACACACTCCAACAAAAAACCCTTC
AACTGCAGTGTCTGCCAAAAGGGGTTCGTCCAGCAGACTGCTTTTAAAAC
ACACATGAAAACAAACCATCCAGAAATGGCTGCAACCACCCAAACGCCGC
AACAAATGCAAGCACCTCCGCCCATGCCGCCTCAAATGCATGGTGGATTT
CACGGGCAGTTTAAAACAGAATAAAGAATACTTTTTGACGTCTAAAAGTC
ACAAAATCAAGCTCCCCCTTGGGAAATTTTTATATTATGGACATGTAGAT
GTGTAGAGGGCTCAGAGAAGCTCACCAGAAAATGTAAAATAGTAGTCTTT
TTATGTCTATATTTAAAGAGATTTATATACTGTATGTATTAGCGTAGGAT
GGGTTTCTGTTGCTTTCTACAAACAAAAACGGAGTAAAACTACAAGGTCG
GTTCTAAAATTTAGATTTTAGTTTTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00059922-exon-scaffold_331-1575043694:1103430..1103619 | TCONS_00059922-exon-scaffold_331-1575043694:1103430..1103619 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1575043694:1099373..1099525 | TCONS_00059922-exon-scaffold_331-1575043694:1099373..1099525 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1575043694:1098941..1098982 | TCONS_00059922-exon-scaffold_331-1575043694:1098941..1098982 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1575043694:1098687..1098734 | TCONS_00059922-exon-scaffold_331-1575043694:1098687..1098734 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1575043694:1098115..1098210 | TCONS_00059922-exon-scaffold_331-1575043694:1098115..1098210 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1575043694:1097064..1097699 | TCONS_00059922-exon-scaffold_331-1575043694:1097064..1097699 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1575043694:1096292..1096911 | TCONS_00059922-exon-scaffold_331-1575043694:1096292..1096911 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1510915933:1103430..1103619 | TCONS_00059922-exon-scaffold_331-1510915933:1103430..1103619 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1510915933:1099373..1099525 | TCONS_00059922-exon-scaffold_331-1510915933:1099373..1099525 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1510915933:1098941..1098982 | TCONS_00059922-exon-scaffold_331-1510915933:1098941..1098982 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1510915933:1098687..1098734 | TCONS_00059922-exon-scaffold_331-1510915933:1098687..1098734 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1510915933:1098115..1098210 | TCONS_00059922-exon-scaffold_331-1510915933:1098115..1098210 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1510915933:1097064..1097699 | TCONS_00059922-exon-scaffold_331-1510915933:1097064..1097699 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1510915933:1096292..1096911 | TCONS_00059922-exon-scaffold_331-1510915933:1096292..1096911 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1491911889:1103430..1103619 | TCONS_00059922-exon-scaffold_331-1491911889:1103430..1103619 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1491911889:1099373..1099525 | TCONS_00059922-exon-scaffold_331-1491911889:1099373..1099525 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1491911889:1098941..1098982 | TCONS_00059922-exon-scaffold_331-1491911889:1098941..1098982 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1491911889:1098687..1098734 | TCONS_00059922-exon-scaffold_331-1491911889:1098687..1098734 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1491911889:1098115..1098210 | TCONS_00059922-exon-scaffold_331-1491911889:1098115..1098210 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1491911889:1097064..1097699 | TCONS_00059922-exon-scaffold_331-1491911889:1097064..1097699 | Clytia hemisphaerica | exon |
TCONS_00059922-exon-scaffold_331-1491911889:1096292..1096911 | TCONS_00059922-exon-scaffold_331-1491911889:1096292..1096911 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_331 | supercontig | scaffold_331:1096292..1103619 - |
Blast
The following BLAST results are available for this feature:
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