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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059996 ID=TCONS_00059996|Name=TCONS_00059996|organism=Clytia hemisphaerica|type=transcript|length=963bp
CTTAAACTCATCTCTAAGGTCAGGGAACGATCTGTATGCGGATGCCATCT
CCAACAAAGGTTGACAAGTATGCGCGATTGGTCTCCGCTGGTTTATTGTC
TCAAAGACAATGAACATTATTTCAATCTTTTCAACCAAGATTATATCAGC
TCCCGTGACaaaatgtagaaaagtttttaacaaagTCGTTTCCAATCCCA
TTACATATTGCCTAAGGTAGGAAAGTACGTCCCGCTCAGCAATGTTCTTT
GGATTTCCTTTTAAGTTTAACTACCTTCCTGTTGGTTGGTGAGATTTTTG
AATAAAGATCTTGAATGGATTTCACCTCTGGAAAGCTTCTTTTGATAGTC
ACCAGCGCATTCCTCCATGTGACCACCATTAGATATGGTTTCTAGATCAA
TTCTTGTCTAGCAAGCTCGAGAACAACACCATAGACGTTCATACATGTAA
CCCGTGTTCTGCAATTGTATCGGTCAAGAAAACTTATAAAATCGTCATCT
TCAAATACTTTTGACGATTGACCAGCAGTCAGAGCTGCATTTACAACAAT
TTCTTCTGGCTTTGTGAGGTATTTCAAAAAGGAATCCAAAAGCATTTTGT
CGGTCAACCCTTCAGCATGGAACAAGCAATTTATGATGAAAGCTTTTGAC
AATAGCATGGGGAAGTAACCACATTGCTGGAAACCTTTCACTAAAATTAA
ACCAAGAATCGACCACTCCTGGACGTAGTAGTCGTGTACGACTAAAGGCA
CCCTCTCCCGATCACCAAGTAATCTCGTGTCGAGAATCTCCTTCCAAAAT
GATGTATAAACATCCCTTATGACCCCGATTCCTTCACCAACTTCTTGTTT
TCCATGGTGATAGATAACAATGAAATTTATTTACATTTCGATACCATTAA
CTCTTGCAAAGCCTTTAATCAAATCTTCAGGAAGCATTGCCCTTCTTAGA
CGAATCGTAATTC Run BLAST on NCBI transcript from alignment at scaffold_331:1319741..1320703 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059996 ID=TCONS_00059996|Name=TCONS_00059996|organism=Clytia hemisphaerica|type=transcript|length=963bp|location=Sequence derived from alignment at scaffold_331:1319741..1320703 (Clytia hemisphaerica)
GAATTACGATTCGTCTAAGAAGGGCAATGCTTCCTGAAGATTTGATTAAA
GGCTTTGCAAGAGTTAATGGTATCGAAATGTAAATAAATTTCATTGTTAT
CTATCACCATGGAAAACAAGAAGTTGGTGAAGGAATCGGGGTCATAAGGG
ATGTTTATACATCATTTTGGAAGGAGATTCTCGACACGAGATTACTTGGT
GATCGGGAGAGGGTGCCTTTAGTCGTACACGACTACTACGTCCAGGAGTG
GTCGATTCTTGGTTTAATTTTAGTGAAAGGTTTCCAGCAATGTGGTTACT
TCCCCATGCTATTGTCAAAAGCTTTCATCATAAATTGCTTGTTCCATGCT
GAAGGGTTGACCGACAAAATGCTTTTGGATTCCTTTTTGAAATACCTCAC
AAAGCCAGAAGAAATTGTTGTAAATGCAGCTCTGACTGCTGGTCAATCGT
CAAAAGTATTTGAAGATGACGATTTTATAAGTTTTCTTGACCGATACAAT
TGCAGAACACGGGTTACATGTATGAACGTCTATGGTGTTGTTCTCGAGCT
TGCTAGACAAGAATTGATCTAGAAACCATATCTAATGGTGGTCACATGGA
GGAATGCGCTGGTGACTATCAAAAGAAGCTTTCCAGAGGTGAAATCCATT
CAAGATCTTTATTCAAAAATCTCACCAACCAACAGGAAGGTAGTTAAACT
TAAAAGGAAATCCAAAGAACATTGCTGAGCGGGACGTACTTTCCTACCTT
AGGCAATATGTAATGGGATTGGAAACGActttgttaaaaacttttctaca
ttttGTCACGGGAGCTGATATAATCTTGGTTGAAAAGATTGAAATAATGT
TCATTGTCTTTGAGACAATAAACCAGCGGAGACCAATCGCGCATACTTGT
CAACCTTTGTTGGAGATGGCATCCGCATACAGATCGTTCCCTGACCTTAG
AGATGAGTTTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059996-exon-scaffold_331-1491911889:1319741..1320703 | TCONS_00059996-exon-scaffold_331-1491911889:1319741..1320703 | Clytia hemisphaerica | exon |
| TCONS_00059996-exon-scaffold_331-1510915933:1319741..1320703 | TCONS_00059996-exon-scaffold_331-1510915933:1319741..1320703 | Clytia hemisphaerica | exon |
| TCONS_00059996-exon-scaffold_331-1575043694:1319741..1320703 | TCONS_00059996-exon-scaffold_331-1575043694:1319741..1320703 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_331 | supercontig | scaffold_331:1319741..1320703 . |
Blast
The following BLAST results are available for this feature:
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