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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060065 ID=TCONS_00060065|Name=TCONS_00060065|organism=Clytia hemisphaerica|type=transcript|length=1358bp
CAGGAATCGGCCATTTGGATTACGTTTGAAATTTACAATCGCAATGATTC
CATCGTGTTTGATTACGTGAATtagttcgattgcgatttttgttcgaagt
tgttcgattgacaccgtgtCTGGGATATTATGATTTCATGAAACACAAGg
ccgagaaaaaaaacattttgttttgagaaaaaatccaatttacaaaaaag
tcaacGCTAAGAAAGGatactaatgtaacattccaaagaTAGTTAAAACT
ATAAAGGCATAAAAATTGAAGATAACCTCGATTTACCTTTCAATGTGTCA
GCATAAACAGTCCAAAGTTAAAATGAAGAGATTCGTTGGTCTTCTGCTCT
agccatcttttattgttttgaaaaatgaaacgatgctatcttattttttt
ggaatgtGAGTAATGATAAATCAGTACTTGTAGTAGACTTTGACATGAAG
CAGAAAGAAAACTCTCATCTTTGAGAAATAAAACCAGCCGTCCGACGAct
tcttgtttttaattttcactaCTGTATTGGCAACGTACTGGGAAGCTAAT
TTTTACAGTTAGCAGAAAAATCAATGAACACAGATAAAGCGGCGCGCGTT
ATTCGGGAGATAAAAATTTAGTTAACCAACTTGAACAAGAGATTATTAGA
CTGTCAACAAAAATTGGAGCAAACCGGCAATCTACTCCCGTCTTCATCCC
CAACAATCCACAGAACCGACAGACTTCAATTCCCAAACCAAAACTCTCCA
ACAAGAATGACCCTCACCAAAGACCAACACTGGATCAACCCCGCACCCCA
AAAACATACTCTCAAATCCTTTTGGAACTACCAGAAGACCCTTCGATTCT
TGGGTCTCCAAAGGAGCCAAAATTACCGCCACGTAAAAATGTTATTATAT
TTGGAGGAAAAAAACCCTTATCTTCAATTCCCAACCAAACACCAGTCATT
GGTAACCCTAAaccattttctttatttatcgGAGGATTCCATCCACAACT
ACAAATTACAGACATTCAGGAAACAATCGAAAAGGATGTAGGaattaaag
taattaaaatcGAACTCAATAAAGAAAACCAGTACAATAAGTCGGTCAAA
GTGGACATCAACGTCAGAGACAAAAACAAAGCTTTAGAGGAGAAAGCCTG
GTTTGAAGGTCTTATTGTTAAGCCATATCGTCACAGGAGAACACCCAGAA
ACATGGACAACCACCCAGAACGACAATATCAGCAATCAGAGGATAATCAT
CATAAACGAACAAATCATTACAACCAGCAAACCAGATTGAGGCGAAACAC
TCATGATGTAAACCATTGGGACTCACTTAATGATGGAAGGTGGTAGAAAG
GATACAAC Run BLAST on NCBI transcript from alignment at scaffold_333:95..1452 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060065 ID=TCONS_00060065|Name=TCONS_00060065|organism=Clytia hemisphaerica|type=transcript|length=1358bp|location=Sequence derived from alignment at scaffold_333:95..1452 (Clytia hemisphaerica)
GTTGTATCCTTTCTACCACCTTCCATCATTAAGTGAGTCCCAATGGTTTA
CATCATGAGTGTTTCGCCTCAATCTGGTTTGCTGGTTGTAATGATTTGTT
CGTTTATGATGATTATCCTCTGATTGCTGATATTGTCGTTCTGGGTGGTT
GTCCATGTTTCTGGGTGTTCTCCTGTGACGATATGGCTTAACAATAAGAC
CTTCAAACCAGGCTTTCTCCTCTAAAGCTTTGTTTTTGTCTCTGACGTTG
ATGTCCACTTTGACCGACTTATTGTACTGGTTTTCTTTATTGAGTTCgat
tttaattactttaattCCTACATCCTTTTCGATTGTTTCCTGAATGTCTG
TAATTTGTAGTTGTGGATGGAATCCTCcgataaataaagaaaatggtTTA
GGGTTACCAATGACTGGTGTTTGGTTGGGAATTGAAGATAAGGGTTTTTT
TCCTCCAAATATAATAACATTTTTACGTGGCGGTAATTTTGGCTCCTTTG
GAGACCCAAGAATCGAAGGGTCTTCTGGTAGTTCCAAAAGGATTTGAGAG
TATGTTTTTGGGGTGCGGGGTTGATCCAGTGTTGGTCTTTGGTGAGGGTC
ATTCTTGTTGGAGAGTTTTGGTTTGGGAATTGAAGTCTGTCGGTTCTGTG
GATTGTTGGGGATGAAGACGGGAGTAGATTGCCGGTTTGCTCCAATTTTT
GTTGACAGTCTAATAATCTCTTGTTCAAGTTGGTTAACTAAATTTTTATC
TCCCGAATAACGCGCGCCGCTTTATCTGTGTTCATTGATTTTTCTGCTAA
CTGTAAAAATTAGCTTCCCAGTACGTTGCCAATACAGtagtgaaaattaa
aaacaagaagTCGTCGGACGGCTGGTTTTATTTCTCAAAGATGAGAGTTT
TCTTTCTGCTTCATGTCAAAGTCTACTACAAGTACTGATTTATCATTACT
Cacattccaaaaaaataagatagcatcgtttcatttttcaaaacaataaa
agatggctAGAGCAGAAGACCAACGAATCTCTTCATTTTAACTTTGGACT
GTTTATGCTGACACATTGAAAGGTAAATCGAGGTTATCTTCAATTTTTAT
GCCTTTATAGTTTTAACTAtctttggaatgttacattagtatCCTTTCTT
AGCgttgacttttttgtaaattggattttttctcaaaacaaaatgttttt
tttctcggcCTTGTGTTTCATGAAATCATAATATCCCAGacacggtgtca
atcgaacaacttcgaacaaaaatcgcaatcgaactaATTCACGTAATCAA
ACACGATGGAATCATTGCGATTGTAAATTTCAAACGTAATCCAAATGGCC
GATTCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060065-exon-scaffold_333-1491911889:95..1452 | TCONS_00060065-exon-scaffold_333-1491911889:95..1452 | Clytia hemisphaerica | exon |
| TCONS_00060065-exon-scaffold_333-1510915933:95..1452 | TCONS_00060065-exon-scaffold_333-1510915933:95..1452 | Clytia hemisphaerica | exon |
| TCONS_00060065-exon-scaffold_333-1575043694:95..1452 | TCONS_00060065-exon-scaffold_333-1575043694:95..1452 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_333 | supercontig | scaffold_333:95..1452 . |
Blast
The following BLAST results are available for this feature:
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