TCONS_00060014 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060014
Unique Name	TCONS_00060014
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1168

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_333:354348..358969+
coding sequence from alignment at scaffold_333:354348..358969+

transcript sequence

>TCONS_00060014 ID=TCONS_00060014|Name=TCONS_00060014|organism=Clytia hemisphaerica|type=transcript|length=1168bp
GTTGAAttgttaattaattttttcatattttacacAAACGATAAATTTGT
AAGActgaataataaaattttaaaatttgtatGTGAAATGAACGAAAATG
TTACAAATTAAATAAtcaatttgtttttcaattttttgaagaatatatAT
TTCTGGCCAGATTCCCTCTAATTCTAAAGAATGACGAAAAACATACAATA
GTACTAGAAATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTT
GACTGATACTGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGG
GCAAAAGATTGACTTCAGgaaatattttgttatctttACAAGAAATTGGA
AGTCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGGCTCAACTAAATG
CAAGTCAGTAAATTACAACAAGGTAACCAAAGAATGCCAATTGATAgacg
aaaatcaaaatttatttgatgaagaaaaatttgaagagAATGATGATTGG
ATATATTATGGAAACCGTGAAAGAACACGAAAGcCCGAATGCAAAACAAA
GGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACATTTTGAGTTGCA
GGAAACctCAATCATGTCAAGACATAAAAGATTCCTGTCCCACGTGTGAC
ACGGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTGCATTTTTAATGA
CAACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATCATTAA
AAACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAATTTTAT
TGTGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAATTTGAC
TATATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGATCAAAA
AAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGCTCTT
GCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTGAGAT
TCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTGGTTC
TAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAAATTG
GAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCATTTTA
CCCAGCTTACAATACATT

Run BLAST on NCBI

protein sequence of TCONS_00060014-protein

>TCONS_00060014-protein ID=TCONS_00060014-protein|Name=TCONS_00060014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MKATVIKLILILYLTDTGFGQSITLNFALRGKRLTSGNILLSLQEIGSPS
ICVTNCLAFGSTKCKSVNYNKVTKECQLIDENQNLFDEEKFEENDDWIYY
GNRERTRKPECKTKEAGTDCCLPSNDILSCRKPQSCQDIKDSCPTCDTGN
YVIKEKSVVCIFNDNNYPTCKVLKQRYPSLKTGFHRVGYGEDVVEFYCDM
DLEGGGWLLVANLTISDVSEAPNLHYDLIKKTQLTSLQEVRTGAYALAYE
TLRNLRTQNAFSEIRIKCRKAVFGKLVHVVLMNVDQFVGIVSKNQKLEGT
DFRFLPDDEFKSFYPAYNT

Run BLAST on NCBI

transcript from alignment at scaffold_333:354348..358969+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060014 ID=TCONS_00060014|Name=TCONS_00060014|organism=Clytia hemisphaerica|type=transcript|length=4622bp|location=Sequence derived from alignment at scaffold_333:354348..358969+ (Clytia hemisphaerica)
GTTGAAttgttaattaattttttcatattttacacAAACGATAAATTTGT
AAGActgaataataaaattttaaaatttgtatGTGAAATGAACGAAAATG
TTACAAATTAAATAAtcaatttgtttttcaattttttgaagaatatatAT
TTCTGGCCAGATTCCCTCTAATTCTAAAGAATGACGAAAAACATACAATA
GTACTAGAAATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTT
GACTGATACTGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGG
GCAAAAGATTGACTTCAGgaaatattttgttatctttACAAGAAATTGGA
AGTCCAAGTATTTGCGTAACGAATTGTTTGGTAAGTATCCTTTCTTAGTT
TTCTTAGAGTTCAGTTAGCAACACTTTCAGACCTTTTAGATTTAATAGCC
CCAGACAACTTTTTTAAGGGTAtaacacctccttctcacagacctactgG
GACCTCTTTCAACTGGAAAGATAAGCGAAAacatcgtccccggtggaaaa
gtatactccaatttttgtccccactgaaaataaccaaaaagaCAATCCTC
acttcaaaatattatgctatttttcctaTCCTCACTGAATttcctgactt
gaaaacaatagaatttaaatccccagccataaaataTATGGTATTCTCAA
TCTCcttcgagtttcagtccgttatttttacccccactggctgtgGCCGA
TCTTGTGACTATGAGCCCCTAAAAATATCTTTACGTTTACACTTTTAGGC
TTTTGGCTCAACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAG
AATGCCAATTGATAgacgaaaatcaaaatttatttgatgaagaaaaattt
gaagagAATGATGATTGGATATATTATGGAAACCGTGAAAGAACACGAAA
GGTAATTTTTAACAACATTTCTCGTAATGTTAGTGAGTTTACGTacttgc
acttttgaggacggtggagtgactgaagcgatttggaataatcAGCAGTT
TTGACGCGAAAAATCAAGGACAGTAAAAGTGCTGTTTTACCATCGTCCTC
AGTTTGTCAAAATCTAGTCCAGAGGGCGGGAACTTATTTATATGCGgtgg
gcgtttgctagaataggagctgcgtaggagaacgagaaaaagttggtgag
aggctgctttcagctcttcctacgcttacctaactcctacgctcacctTT
CACGCGTGATACCGGAAGCCCGACTGGTGTGTCAGTctggatctagtcaa
attagagccttaccgtctccgtcacagAAAAACACAGAATACATGAACTC
GCTGTTATTTCAATGTTTATGGTTCCGTTATATATGGACGTTATTGTTTC
TTTCCTCACATAGATAATGTTATGTAAGCCCCAAATTTTACGCGTTTACG
CTGATTGTTCTTTGATTcacaaaaaggaaagaaaaatcttttcggGAAAT
TTTCGTGGAAATAATTGAggaaaaattgctaaaataagAGATATTTGCAC
AAAGATTTATATGCCTTCAttagttctatttatactgagacgattgagac
gagcaatttagaaaatgagcattatggaggagtgtactttccattcatgt
ttcaataaataggatcttctccacagatcacattttacaaactactcgtc
tcagacgatttttccgtctcagtataaatggaactattGGAACTATTGCG
AATCTTACGCATTCAGGCAATTAAAAAGTGGAGTTTCACGGATTAAAACT
GTGGACTTCTTTCAATTAGGAAGTGTTTTGAATTCTTTATTAGCTGCTGT
CATCAAGGACAGAGACATCTAATGTTTTCtatatttgacatttttcagcC
CGAATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATG
ACATTTTGAGTTGCAGGAAACGTAAGCTTTATGAATGGTTGAAACTGATG
TCGAATATTGAtacattaaaaaaatcattaacatttttttgaaagcgagt
ttccttcttcggcacgtttttttataacaacatccaaaattttgaggcCT
GATTGAATAAATCCCATCGGAGAGAAATGATAGTTGGCCTTTTAATTGCA
TCATCCAAGTCGGTTTCATATGCATTAGTgcataaacataaaaagttttc
cgGCTAGAGCAACCAATCTCCGAAAATTTTGCTGTAAAATTCTTGATACG
GCCTTGAAAAATTACTtaatctaaaccttctaaagtctgttcacgataag
tgtgcactcttttttcatttacctataacttttgaaggaattcttcaatc
tttataaatttggtatcattggaaagatattagtgagtgaaacaatttgg
aataaaaaaatcgataaaaaaattctaaaaacgaagatgaaaatgaagaa
gaaaaaaattaagatcttgtagaaaagtgctataactatcattttcactg
aagtgaatccttgattatcgaacgtcatcactgtgaaaaaaattctcaaa
aattctcattcagtcaaaagatatcaaacaaagttataagctgattgacg
tctaaaagcGCTGTTTTctcctgttttctgctgttttttggggtcaatca
cttataaactttgtatcataactttattttgaataaatattttagtgaaa
tttcttcacagtgatgacctcctaagatcaaagaatctatcaagtgaaaa
tgaaagttatagcacttctctacaagatcttcatttttttcttcttcatt
ttcatcttcgtttttagaattttttcaaagacttttttatttcaaattgt
tccactcacaaatatctttccaatgataccaaatttataaagatttaaga
attccttcaaaagttataggtaaaagaaaaaagagtgcacacttatcgtg
aacagactttagatgctgattttttttataaaagtacaCATTCTTTTAGA
TAAGTTCATTTCTGTGTAAAATAATTGACTGAGTGCCAGGATTACACAAA
TGAAGCGAGAGCTTGAAAGCTAGACGAGTCCTTTCACCCCAATGAtaatc
ttcttcattttttcagctCAATCATGTCAAGACATAAAAGATTCCTGTCC
CACGTGTGACACGGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTGCA
TTTTTAATGGTAAGTAGaacacacgttttttataagaacaaactacataa
gaacagaaggcttcgatggccaacatcttaagaacaagttaagaacattt
taaggctttgctgactctaaaacaccaattTCATACGTAATTAAACTCCG
GTTAAGGAGTTTgttaaaatcagtgtttttcatttgtaattgtaCGTAAA
TCCGATCAATCGCGATATTCGggttcgatttcccgatctttccAGTTTTA
TTTCCCGATTTGGTTTGAGTTTGTGCTCGTACCTACTAGGATATACCCTT
TCaaattttatgttagatataNGATCTTTCCAGTATTATTTCCCGATTTG
GTTTGAGTTTGTGCTCGTACCTACTAGGATATGTTAAGAAAGGCTGACCA
CGATAAAGATGTTTGCATAATGGTTCGCTATTCAAAAATGACAACTACCG
GAGTTTGCAGCCGTCATTACggctgttttatttattttccttaGTTTTAT
AAtcgtttttctcatttttcttagACAACAACTATCCTACTTGTAAAGTG
CTCAAGCAGAGATACCCATCATTAAAAACCGGCTTCCACCGAGTTGGTTA
TGGAGAAGACGTGGTTGAATTTTATTGTGATATGGACCTAGAAGGTGGta
agtaaatataaaaaaaacttcgTTTACCCTGCGGGGTATTGCGGGCCGGG
GTATTTGTGCAAAATAGGTACCGTATGATCTGTAAAGCTACTTTTTTACC
CCTCAAATTCTGACAAAAAGTCACTCCCAAATATCTAATAGCCCTCTAAC
AAGGACACCAAATAATTTGCACAAATTCCTATGTTTTCTTTTCAGGAAAA
CTATCGATAAgaacattcaacatttttaaagccttcagatgttcttaact
taggtttcaaaatgctcttaaattgttcttattttcaccattttctgatt
atttttgtGCTATTTCCTAAGGAATTGGGTCCGTAAAGTCTTATAATGTC
TTTATTTGTTCGTAATATTTTGACCAGAGAAGGCTTACAAAACGTCTAAA
CCTTCTGAATGAACATTATATTCTAGGTGGCTGGCTATTGGTAGCAAATT
TGACTATATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGATC
AAAAAAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGC
TCTTGCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTG
AGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTG
GTTCTAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAA
ATTGGAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCAT
TTTACCCAGCTTACAATACATT

Coding sequence (CDS) from alignment at scaffold_333:354348..358969+

>TCONS_00060014 ID=TCONS_00060014|Name=TCONS_00060014|organism=Clytia hemisphaerica|type=CDS|length=5742bp|location=Sequence derived from alignment at scaffold_333:354348..358969+ (Clytia hemisphaerica)
ATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTTGACTGATAC
TGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGGGCAAAAGAT
TGACTTCAGgaaatattttgttatctttACAAGAAATTGGAAGTCCAAGT
ATTTGCGTAACGAATTGTTTGGCTTTTGGCTCAACTAAATGCAAGTCAGT
AAATTACAACAAGGTAACCAAAGAATGCCAATTGATAgacgaaaatcaaa
atttatttgatgaagaaaaatttgaagagAATGATGATTGGATATATTAT
GGAAACCGTGAAAGAACACGAAAGcCCGAATGCAAAACAAAGGAAGCTGG
CACCGATTGCTGCTTGCCGTCAAATGACATTTTGAGTTGCAGGAAACctC
AATCATGTCAAGACATAAAAGATTCCTGTCCCACGTGTGACACGGGAAAC
TAtgtaatcaaagaaaaaagtgtTGTCTGCATTTTTAATGACAACAACTA
TCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATCATTAAAAACCGGCT
TCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAATTTTATTGTGATATG
GACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAATTTGACTATATCAGA
TGTTTCAGAGGCTCCAAATTTACATTATGATTTGATCAAAAAAACACAAT
TGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGCTCTTGCGTACGAG
ACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTGAGATTCGCATTAA
GTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTGGTTCTAATGAATG
TCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAAATTGGAAGGAACA
GATTTCAGATTCCTTCCTGATGATGAGTTCAAATCATTTTACCCAGCTTA
CAATACAATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTTGA
CTGATACTGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGGGC
AAAAGATTGACTTCAGgaaatattttgttatctttACAAGAAATTGGAAG
TCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGGCTCAACTAAATGCA
AGTCAGTAAATTACAACAAGGTAACCAAAGAATGCCAATTGATAgacgaa
aatcaaaatttatttgatgaagaaaaatttgaagagAATGATGATTGGAT
ATATTATGGAAACCGTGAAAGAACACGAAAGcCCGAATGCAAAACAAAGG
AAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACATTTTGAGTTGCAGG
AAACctCAATCATGTCAAGACATAAAAGATTCCTGTCCCACGTGTGACAC
GGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTGCATTTTTAATGACA
ACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATCATTAAAA
ACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAATTTTATTG
TGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAATTTGACTA
TATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGATCAAAAAA
ACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGCTCTTGC
GTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTGAGATTC
GCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTGGTTCTA
ATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAAATTGGA
AGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCATTTTACC
CAGCTTACAATACAATGAAAGCTACTGTGATTAAGTTGATATTGATTCTT
TATTTGACTGATACTGGATTTGGACAATCAATCACATTAAATTTTGCATT
ACGGGGCAAAAGATTGACTTCAGgaaatattttgttatctttACAAGAAA
TTGGAAGTCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGGCTCAACT
AAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAGAATGCCAATTGAT
AgacgaaaatcaaaatttatttgatgaagaaaaatttgaagagAATGATG
ATTGGATATATTATGGAAACCGTGAAAGAACACGAAAGcCCGAATGCAAA
ACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACATTTTGAG
TTGCAGGAAACctCAATCATGTCAAGACATAAAAGATTCCTGTCCCACGT
GTGACACGGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTGCATTTTT
AATGACAACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATC
ATTAAAAACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAAT
TTTATTGTGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAAT
TTGACTATATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGAT
CAAAAAAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACG
CTCTTGCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGT
GAGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGT
GGTTCTAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAA
AATTGGAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCA
TTTTACCCAGCTTACAATACAATGAAAGCTACTGTGATTAAGTTGATATT
GATTCTTTATTTGACTGATACTGGATTTGGACAATCAATCACATTAAATT
TTGCATTACGGGGCAAAAGATTGACTTCAGgaaatattttgttatctttA
CAAGAAATTGGAAGTCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGG
CTCAACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAGAATGCC
AATTGATAgacgaaaatcaaaatttatttgatgaagaaaaatttgaagag
AATGATGATTGGATATATTATGGAAACCGTGAAAGAACACGAAAGcCCGA
ATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACA
TTTTGAGTTGCAGGAAACctCAATCATGTCAAGACATAAAAGATTCCTGT
CCCACGTGTGACACGGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTG
CATTTTTAATGACAACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGAT
ACCCATCATTAAAAACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTG
GTTGAATTTTATTGTGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGT
AGCAAATTTGACTATATCAGATGTTTCAGAGGCTCCAAATTTACATTATG
ATTTGATCAAAAAAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGT
GCTTACGCTCTTGCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGC
TTTTAGTGAGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAG
TTCATGTGGTTCTAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAG
AACCAAAAATTGGAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTT
CAAATCATTTTACCCAGCTTACAATACAATGAAAGCTACTGTGATTAAGT
TGATATTGATTCTTTATTTGACTGATACTGGATTTGGACAATCAATCACA
TTAAATTTTGCATTACGGGGCAAAAGATTGACTTCAGgaaatattttgtt
atctttACAAGAAATTGGAAGTCCAAGTATTTGCGTAACGAATTGTTTGG
CTTTTGGCTCAACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAA
GAATGCCAATTGATAgacgaaaatcaaaatttatttgatgaagaaaaatt
tgaagagAATGATGATTGGATATATTATGGAAACCGTGAAAGAACACGAA
AGcCCGAATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCA
AATGACATTTTGAGTTGCAGGAAACctCAATCATGTCAAGACATAAAAGA
TTCCTGTCCCACGTGTGACACGGGAAACTAtgtaatcaaagaaaaaagtg
tTGTCTGCATTTTTAATGACAACAACTATCCTACTTGTAAAGTGCTCAAG
CAGAGATACCCATCATTAAAAACCGGCTTCCACCGAGTTGGTTATGGAGA
AGACGTGGTTGAATTTTATTGTGATATGGACCTAGAAGGTGGTGGCTGGC
TATTGGTAGCAAATTTGACTATATCAGATGTTTCAGAGGCTCCAAATTTA
CATTATGATTTGATCAAAAAAACACAATTGACGTCGCTCCAAGAAGTACG
AACGGGTGCTTACGCTCTTGCGTACGAGACGTTAAGAAATTTACGTACCC
AAAATGCTTTTAGTGAGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGG
AAACTAGTTCATGTGGTTCTAATGAATGTCGATCAGTTTGTTGGCATTGT
TTCTAAGAACCAAAAATTGGAAGGAACAGATTTCAGATTCCTTCCTGATG
ATGAGTTCAAATCATTTTACCCAGCTTACAATACAATGAAAGCTACTGTG
ATTAAGTTGATATTGATTCTTTATTTGACTGATACTGGATTTGGACAATC
AATCACATTAAATTTTGCATTACGGGGCAAAAGATTGACTTCAGgaaata
ttttgttatctttACAAGAAATTGGAAGTCCAAGTATTTGCGTAACGAAT
TGTTTGGCTTTTGGCTCAACTAAATGCAAGTCAGTAAATTACAACAAGGT
AACCAAAGAATGCCAATTGATAgacgaaaatcaaaatttatttgatgaag
aaaaatttgaagagAATGATGATTGGATATATTATGGAAACCGTGAAAGA
ACACGAAAGcCCGAATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTT
GCCGTCAAATGACATTTTGAGTTGCAGGAAACctCAATCATGTCAAGACA
TAAAAGATTCCTGTCCCACGTGTGACACGGGAAACTAtgtaatcaaagaa
aaaagtgtTGTCTGCATTTTTAATGACAACAACTATCCTACTTGTAAAGT
GCTCAAGCAGAGATACCCATCATTAAAAACCGGCTTCCACCGAGTTGGTT
ATGGAGAAGACGTGGTTGAATTTTATTGTGATATGGACCTAGAAGGTGGT
GGCTGGCTATTGGTAGCAAATTTGACTATATCAGATGTTTCAGAGGCTCC
AAATTTACATTATGATTTGATCAAAAAAACACAATTGACGTCGCTCCAAG
AAGTACGAACGGGTGCTTACGCTCTTGCGTACGAGACGTTAAGAAATTTA
CGTACCCAAAATGCTTTTAGTGAGATTCGCATTAAGTGTCGCAAAGCCGT
GTTTGGGAAACTAGTTCATGTGGTTCTAATGAATGTCGATCAGTTTGTTG
GCATTGTTTCTAAGAACCAAAAATTGGAAGGAACAGATTTCAGATTCCTT
CCTGATGATGAGTTCAAATCATTTTACCCAGCTTACAATACA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037764	XLOC_037764	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00060014-protein	TCONS_00060014-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_333	supercontig	scaffold_333:354348..358969 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.66091	0.685434	0	0.0847032	0	0	0	0	0.118804	0	0.335922	0.110411	3.33802	3.32061	0.607405	1.39769	0.174395	0.464104	3.34841	3.59932	1.57381	1.41317	0.437663	0.925521	0.223559	0.564258	0	0	0	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR003609	Pan_app
IPR014716	Fibrinogen_a/b/g_C_1
IPR002181	Fibrinogen_a/b/g_C_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00060014 vs. Swiss-Prot (Human)

BLAST of TCONS_00060014 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00060014 (transcript) - C. hemisphaerica