TCONS_00060014 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060014
Unique NameTCONS_00060014
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1168

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060014 ID=TCONS_00060014|Name=TCONS_00060014|organism=Clytia hemisphaerica|type=transcript|length=1168bp
GTTGAAttgttaattaattttttcatattttacacAAACGATAAATTTGT
AAGActgaataataaaattttaaaatttgtatGTGAAATGAACGAAAATG
TTACAAATTAAATAAtcaatttgtttttcaattttttgaagaatatatAT
TTCTGGCCAGATTCCCTCTAATTCTAAAGAATGACGAAAAACATACAATA
GTACTAGAAATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTT
GACTGATACTGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGG
GCAAAAGATTGACTTCAGgaaatattttgttatctttACAAGAAATTGGA
AGTCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGGCTCAACTAAATG
CAAGTCAGTAAATTACAACAAGGTAACCAAAGAATGCCAATTGATAgacg
aaaatcaaaatttatttgatgaagaaaaatttgaagagAATGATGATTGG
ATATATTATGGAAACCGTGAAAGAACACGAAAGcCCGAATGCAAAACAAA
GGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACATTTTGAGTTGCA
GGAAACctCAATCATGTCAAGACATAAAAGATTCCTGTCCCACGTGTGAC
ACGGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTGCATTTTTAATGA
CAACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATCATTAA
AAACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAATTTTAT
TGTGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAATTTGAC
TATATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGATCAAAA
AAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGCTCTT
GCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTGAGAT
TCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTGGTTC
TAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAAATTG
GAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCATTTTA
CCCAGCTTACAATACATT
Run BLAST on NCBI

protein sequence of TCONS_00060014-protein

>TCONS_00060014-protein ID=TCONS_00060014-protein|Name=TCONS_00060014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MKATVIKLILILYLTDTGFGQSITLNFALRGKRLTSGNILLSLQEIGSPS
ICVTNCLAFGSTKCKSVNYNKVTKECQLIDENQNLFDEEKFEENDDWIYY
GNRERTRKPECKTKEAGTDCCLPSNDILSCRKPQSCQDIKDSCPTCDTGN
YVIKEKSVVCIFNDNNYPTCKVLKQRYPSLKTGFHRVGYGEDVVEFYCDM
DLEGGGWLLVANLTISDVSEAPNLHYDLIKKTQLTSLQEVRTGAYALAYE
TLRNLRTQNAFSEIRIKCRKAVFGKLVHVVLMNVDQFVGIVSKNQKLEGT
DFRFLPDDEFKSFYPAYNT
Run BLAST on NCBI

transcript from alignment at scaffold_333:354348..358969+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060014 ID=TCONS_00060014|Name=TCONS_00060014|organism=Clytia hemisphaerica|type=transcript|length=4622bp|location=Sequence derived from alignment at scaffold_333:354348..358969+ (Clytia hemisphaerica)
GTTGAAttgttaattaattttttcatattttacacAAACGATAAATTTGT AAGActgaataataaaattttaaaatttgtatGTGAAATGAACGAAAATG TTACAAATTAAATAAtcaatttgtttttcaattttttgaagaatatatAT TTCTGGCCAGATTCCCTCTAATTCTAAAGAATGACGAAAAACATACAATA GTACTAGAAATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTT GACTGATACTGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGG GCAAAAGATTGACTTCAGgaaatattttgttatctttACAAGAAATTGGA AGTCCAAGTATTTGCGTAACGAATTGTTTGGTAAGTATCCTTTCTTAGTT TTCTTAGAGTTCAGTTAGCAACACTTTCAGACCTTTTAGATTTAATAGCC CCAGACAACTTTTTTAAGGGTAtaacacctccttctcacagacctactgG GACCTCTTTCAACTGGAAAGATAAGCGAAAacatcgtccccggtggaaaa gtatactccaatttttgtccccactgaaaataaccaaaaagaCAATCCTC acttcaaaatattatgctatttttcctaTCCTCACTGAATttcctgactt gaaaacaatagaatttaaatccccagccataaaataTATGGTATTCTCAA TCTCcttcgagtttcagtccgttatttttacccccactggctgtgGCCGA TCTTGTGACTATGAGCCCCTAAAAATATCTTTACGTTTACACTTTTAGGC TTTTGGCTCAACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAG AATGCCAATTGATAgacgaaaatcaaaatttatttgatgaagaaaaattt gaagagAATGATGATTGGATATATTATGGAAACCGTGAAAGAACACGAAA GGTAATTTTTAACAACATTTCTCGTAATGTTAGTGAGTTTACGTacttgc acttttgaggacggtggagtgactgaagcgatttggaataatcAGCAGTT TTGACGCGAAAAATCAAGGACAGTAAAAGTGCTGTTTTACCATCGTCCTC AGTTTGTCAAAATCTAGTCCAGAGGGCGGGAACTTATTTATATGCGgtgg gcgtttgctagaataggagctgcgtaggagaacgagaaaaagttggtgag aggctgctttcagctcttcctacgcttacctaactcctacgctcacctTT CACGCGTGATACCGGAAGCCCGACTGGTGTGTCAGTctggatctagtcaa attagagccttaccgtctccgtcacagAAAAACACAGAATACATGAACTC GCTGTTATTTCAATGTTTATGGTTCCGTTATATATGGACGTTATTGTTTC TTTCCTCACATAGATAATGTTATGTAAGCCCCAAATTTTACGCGTTTACG CTGATTGTTCTTTGATTcacaaaaaggaaagaaaaatcttttcggGAAAT TTTCGTGGAAATAATTGAggaaaaattgctaaaataagAGATATTTGCAC AAAGATTTATATGCCTTCAttagttctatttatactgagacgattgagac gagcaatttagaaaatgagcattatggaggagtgtactttccattcatgt ttcaataaataggatcttctccacagatcacattttacaaactactcgtc tcagacgatttttccgtctcagtataaatggaactattGGAACTATTGCG AATCTTACGCATTCAGGCAATTAAAAAGTGGAGTTTCACGGATTAAAACT GTGGACTTCTTTCAATTAGGAAGTGTTTTGAATTCTTTATTAGCTGCTGT CATCAAGGACAGAGACATCTAATGTTTTCtatatttgacatttttcagcC CGAATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATG ACATTTTGAGTTGCAGGAAACGTAAGCTTTATGAATGGTTGAAACTGATG TCGAATATTGAtacattaaaaaaatcattaacatttttttgaaagcgagt ttccttcttcggcacgtttttttataacaacatccaaaattttgaggcCT GATTGAATAAATCCCATCGGAGAGAAATGATAGTTGGCCTTTTAATTGCA TCATCCAAGTCGGTTTCATATGCATTAGTgcataaacataaaaagttttc cgGCTAGAGCAACCAATCTCCGAAAATTTTGCTGTAAAATTCTTGATACG GCCTTGAAAAATTACTtaatctaaaccttctaaagtctgttcacgataag tgtgcactcttttttcatttacctataacttttgaaggaattcttcaatc tttataaatttggtatcattggaaagatattagtgagtgaaacaatttgg aataaaaaaatcgataaaaaaattctaaaaacgaagatgaaaatgaagaa gaaaaaaattaagatcttgtagaaaagtgctataactatcattttcactg aagtgaatccttgattatcgaacgtcatcactgtgaaaaaaattctcaaa aattctcattcagtcaaaagatatcaaacaaagttataagctgattgacg tctaaaagcGCTGTTTTctcctgttttctgctgttttttggggtcaatca cttataaactttgtatcataactttattttgaataaatattttagtgaaa tttcttcacagtgatgacctcctaagatcaaagaatctatcaagtgaaaa tgaaagttatagcacttctctacaagatcttcatttttttcttcttcatt ttcatcttcgtttttagaattttttcaaagacttttttatttcaaattgt tccactcacaaatatctttccaatgataccaaatttataaagatttaaga attccttcaaaagttataggtaaaagaaaaaagagtgcacacttatcgtg aacagactttagatgctgattttttttataaaagtacaCATTCTTTTAGA TAAGTTCATTTCTGTGTAAAATAATTGACTGAGTGCCAGGATTACACAAA TGAAGCGAGAGCTTGAAAGCTAGACGAGTCCTTTCACCCCAATGAtaatc ttcttcattttttcagctCAATCATGTCAAGACATAAAAGATTCCTGTCC CACGTGTGACACGGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTGCA TTTTTAATGGTAAGTAGaacacacgttttttataagaacaaactacataa gaacagaaggcttcgatggccaacatcttaagaacaagttaagaacattt taaggctttgctgactctaaaacaccaattTCATACGTAATTAAACTCCG GTTAAGGAGTTTgttaaaatcagtgtttttcatttgtaattgtaCGTAAA TCCGATCAATCGCGATATTCGggttcgatttcccgatctttccAGTTTTA TTTCCCGATTTGGTTTGAGTTTGTGCTCGTACCTACTAGGATATACCCTT TCaaattttatgttagatataNGATCTTTCCAGTATTATTTCCCGATTTG GTTTGAGTTTGTGCTCGTACCTACTAGGATATGTTAAGAAAGGCTGACCA CGATAAAGATGTTTGCATAATGGTTCGCTATTCAAAAATGACAACTACCG GAGTTTGCAGCCGTCATTACggctgttttatttattttccttaGTTTTAT AAtcgtttttctcatttttcttagACAACAACTATCCTACTTGTAAAGTG CTCAAGCAGAGATACCCATCATTAAAAACCGGCTTCCACCGAGTTGGTTA TGGAGAAGACGTGGTTGAATTTTATTGTGATATGGACCTAGAAGGTGGta agtaaatataaaaaaaacttcgTTTACCCTGCGGGGTATTGCGGGCCGGG GTATTTGTGCAAAATAGGTACCGTATGATCTGTAAAGCTACTTTTTTACC CCTCAAATTCTGACAAAAAGTCACTCCCAAATATCTAATAGCCCTCTAAC AAGGACACCAAATAATTTGCACAAATTCCTATGTTTTCTTTTCAGGAAAA CTATCGATAAgaacattcaacatttttaaagccttcagatgttcttaact taggtttcaaaatgctcttaaattgttcttattttcaccattttctgatt atttttgtGCTATTTCCTAAGGAATTGGGTCCGTAAAGTCTTATAATGTC TTTATTTGTTCGTAATATTTTGACCAGAGAAGGCTTACAAAACGTCTAAA CCTTCTGAATGAACATTATATTCTAGGTGGCTGGCTATTGGTAGCAAATT TGACTATATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGATC AAAAAAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGC TCTTGCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTG AGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTG GTTCTAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAA ATTGGAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCAT TTTACCCAGCTTACAATACATT

Coding sequence (CDS) from alignment at scaffold_333:354348..358969+

>TCONS_00060014 ID=TCONS_00060014|Name=TCONS_00060014|organism=Clytia hemisphaerica|type=CDS|length=5742bp|location=Sequence derived from alignment at scaffold_333:354348..358969+ (Clytia hemisphaerica)
ATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTTGACTGATAC
TGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGGGCAAAAGAT
TGACTTCAGgaaatattttgttatctttACAAGAAATTGGAAGTCCAAGT
ATTTGCGTAACGAATTGTTTGGCTTTTGGCTCAACTAAATGCAAGTCAGT
AAATTACAACAAGGTAACCAAAGAATGCCAATTGATAgacgaaaatcaaa
atttatttgatgaagaaaaatttgaagagAATGATGATTGGATATATTAT
GGAAACCGTGAAAGAACACGAAAGcCCGAATGCAAAACAAAGGAAGCTGG
CACCGATTGCTGCTTGCCGTCAAATGACATTTTGAGTTGCAGGAAACctC
AATCATGTCAAGACATAAAAGATTCCTGTCCCACGTGTGACACGGGAAAC
TAtgtaatcaaagaaaaaagtgtTGTCTGCATTTTTAATGACAACAACTA
TCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATCATTAAAAACCGGCT
TCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAATTTTATTGTGATATG
GACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAATTTGACTATATCAGA
TGTTTCAGAGGCTCCAAATTTACATTATGATTTGATCAAAAAAACACAAT
TGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGCTCTTGCGTACGAG
ACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTGAGATTCGCATTAA
GTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTGGTTCTAATGAATG
TCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAAATTGGAAGGAACA
GATTTCAGATTCCTTCCTGATGATGAGTTCAAATCATTTTACCCAGCTTA
CAATACAATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTTGA
CTGATACTGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGGGC
AAAAGATTGACTTCAGgaaatattttgttatctttACAAGAAATTGGAAG
TCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGGCTCAACTAAATGCA
AGTCAGTAAATTACAACAAGGTAACCAAAGAATGCCAATTGATAgacgaa
aatcaaaatttatttgatgaagaaaaatttgaagagAATGATGATTGGAT
ATATTATGGAAACCGTGAAAGAACACGAAAGcCCGAATGCAAAACAAAGG
AAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACATTTTGAGTTGCAGG
AAACctCAATCATGTCAAGACATAAAAGATTCCTGTCCCACGTGTGACAC
GGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTGCATTTTTAATGACA
ACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATCATTAAAA
ACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAATTTTATTG
TGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAATTTGACTA
TATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGATCAAAAAA
ACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGCTCTTGC
GTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTGAGATTC
GCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTGGTTCTA
ATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAAATTGGA
AGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCATTTTACC
CAGCTTACAATACAATGAAAGCTACTGTGATTAAGTTGATATTGATTCTT
TATTTGACTGATACTGGATTTGGACAATCAATCACATTAAATTTTGCATT
ACGGGGCAAAAGATTGACTTCAGgaaatattttgttatctttACAAGAAA
TTGGAAGTCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGGCTCAACT
AAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAGAATGCCAATTGAT
AgacgaaaatcaaaatttatttgatgaagaaaaatttgaagagAATGATG
ATTGGATATATTATGGAAACCGTGAAAGAACACGAAAGcCCGAATGCAAA
ACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACATTTTGAG
TTGCAGGAAACctCAATCATGTCAAGACATAAAAGATTCCTGTCCCACGT
GTGACACGGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTGCATTTTT
AATGACAACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATC
ATTAAAAACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAAT
TTTATTGTGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAAT
TTGACTATATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGAT
CAAAAAAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACG
CTCTTGCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGT
GAGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGT
GGTTCTAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAA
AATTGGAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCA
TTTTACCCAGCTTACAATACAATGAAAGCTACTGTGATTAAGTTGATATT
GATTCTTTATTTGACTGATACTGGATTTGGACAATCAATCACATTAAATT
TTGCATTACGGGGCAAAAGATTGACTTCAGgaaatattttgttatctttA
CAAGAAATTGGAAGTCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGG
CTCAACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAGAATGCC
AATTGATAgacgaaaatcaaaatttatttgatgaagaaaaatttgaagag
AATGATGATTGGATATATTATGGAAACCGTGAAAGAACACGAAAGcCCGA
ATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACA
TTTTGAGTTGCAGGAAACctCAATCATGTCAAGACATAAAAGATTCCTGT
CCCACGTGTGACACGGGAAACTAtgtaatcaaagaaaaaagtgtTGTCTG
CATTTTTAATGACAACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGAT
ACCCATCATTAAAAACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTG
GTTGAATTTTATTGTGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGT
AGCAAATTTGACTATATCAGATGTTTCAGAGGCTCCAAATTTACATTATG
ATTTGATCAAAAAAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGT
GCTTACGCTCTTGCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGC
TTTTAGTGAGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAG
TTCATGTGGTTCTAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAG
AACCAAAAATTGGAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTT
CAAATCATTTTACCCAGCTTACAATACAATGAAAGCTACTGTGATTAAGT
TGATATTGATTCTTTATTTGACTGATACTGGATTTGGACAATCAATCACA
TTAAATTTTGCATTACGGGGCAAAAGATTGACTTCAGgaaatattttgtt
atctttACAAGAAATTGGAAGTCCAAGTATTTGCGTAACGAATTGTTTGG
CTTTTGGCTCAACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAA
GAATGCCAATTGATAgacgaaaatcaaaatttatttgatgaagaaaaatt
tgaagagAATGATGATTGGATATATTATGGAAACCGTGAAAGAACACGAA
AGcCCGAATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCA
AATGACATTTTGAGTTGCAGGAAACctCAATCATGTCAAGACATAAAAGA
TTCCTGTCCCACGTGTGACACGGGAAACTAtgtaatcaaagaaaaaagtg
tTGTCTGCATTTTTAATGACAACAACTATCCTACTTGTAAAGTGCTCAAG
CAGAGATACCCATCATTAAAAACCGGCTTCCACCGAGTTGGTTATGGAGA
AGACGTGGTTGAATTTTATTGTGATATGGACCTAGAAGGTGGTGGCTGGC
TATTGGTAGCAAATTTGACTATATCAGATGTTTCAGAGGCTCCAAATTTA
CATTATGATTTGATCAAAAAAACACAATTGACGTCGCTCCAAGAAGTACG
AACGGGTGCTTACGCTCTTGCGTACGAGACGTTAAGAAATTTACGTACCC
AAAATGCTTTTAGTGAGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGG
AAACTAGTTCATGTGGTTCTAATGAATGTCGATCAGTTTGTTGGCATTGT
TTCTAAGAACCAAAAATTGGAAGGAACAGATTTCAGATTCCTTCCTGATG
ATGAGTTCAAATCATTTTACCCAGCTTACAATACAATGAAAGCTACTGTG
ATTAAGTTGATATTGATTCTTTATTTGACTGATACTGGATTTGGACAATC
AATCACATTAAATTTTGCATTACGGGGCAAAAGATTGACTTCAGgaaata
ttttgttatctttACAAGAAATTGGAAGTCCAAGTATTTGCGTAACGAAT
TGTTTGGCTTTTGGCTCAACTAAATGCAAGTCAGTAAATTACAACAAGGT
AACCAAAGAATGCCAATTGATAgacgaaaatcaaaatttatttgatgaag
aaaaatttgaagagAATGATGATTGGATATATTATGGAAACCGTGAAAGA
ACACGAAAGcCCGAATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTT
GCCGTCAAATGACATTTTGAGTTGCAGGAAACctCAATCATGTCAAGACA
TAAAAGATTCCTGTCCCACGTGTGACACGGGAAACTAtgtaatcaaagaa
aaaagtgtTGTCTGCATTTTTAATGACAACAACTATCCTACTTGTAAAGT
GCTCAAGCAGAGATACCCATCATTAAAAACCGGCTTCCACCGAGTTGGTT
ATGGAGAAGACGTGGTTGAATTTTATTGTGATATGGACCTAGAAGGTGGT
GGCTGGCTATTGGTAGCAAATTTGACTATATCAGATGTTTCAGAGGCTCC
AAATTTACATTATGATTTGATCAAAAAAACACAATTGACGTCGCTCCAAG
AAGTACGAACGGGTGCTTACGCTCTTGCGTACGAGACGTTAAGAAATTTA
CGTACCCAAAATGCTTTTAGTGAGATTCGCATTAAGTGTCGCAAAGCCGT
GTTTGGGAAACTAGTTCATGTGGTTCTAATGAATGTCGATCAGTTTGTTG
GCATTGTTTCTAAGAACCAAAAATTGGAAGGAACAGATTTCAGATTCCTT
CCTGATGATGAGTTCAAATCATTTTACCCAGCTTACAATACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037764XLOC_037764Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060014-proteinTCONS_00060014-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060014-exon-scaffold_333-1491911889:354348..354727TCONS_00060014-exon-scaffold_333-1491911889:354348..354727Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1510915933:354348..354727TCONS_00060014-exon-scaffold_333-1510915933:354348..354727Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1575043694:354348..354727TCONS_00060014-exon-scaffold_333-1575043694:354348..354727Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1491911889:355146..355298TCONS_00060014-exon-scaffold_333-1491911889:355146..355298Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1510915933:355146..355298TCONS_00060014-exon-scaffold_333-1510915933:355146..355298Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1575043694:355146..355298TCONS_00060014-exon-scaffold_333-1575043694:355146..355298Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1491911889:356246..356318TCONS_00060014-exon-scaffold_333-1491911889:356246..356318Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1510915933:356246..356318TCONS_00060014-exon-scaffold_333-1510915933:356246..356318Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1575043694:356246..356318TCONS_00060014-exon-scaffold_333-1575043694:356246..356318Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1491911889:357464..357556TCONS_00060014-exon-scaffold_333-1491911889:357464..357556Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1510915933:357464..357556TCONS_00060014-exon-scaffold_333-1510915933:357464..357556Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1575043694:357464..357556TCONS_00060014-exon-scaffold_333-1575043694:357464..357556Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1491911889:358072..358194TCONS_00060014-exon-scaffold_333-1491911889:358072..358194Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1510915933:358072..358194TCONS_00060014-exon-scaffold_333-1510915933:358072..358194Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1575043694:358072..358194TCONS_00060014-exon-scaffold_333-1575043694:358072..358194Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1491911889:358624..358969TCONS_00060014-exon-scaffold_333-1491911889:358624..358969Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1510915933:358624..358969TCONS_00060014-exon-scaffold_333-1510915933:358624..358969Clytia hemisphaericaexon
TCONS_00060014-exon-scaffold_333-1575043694:358624..358969TCONS_00060014-exon-scaffold_333-1575043694:358624..358969Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_333supercontigscaffold_333:354348..358969 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (3.59932 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.66091 0.685434 0 0.0847032 0 0 0 0 0.118804 0 0.335922 0.110411 3.33802 3.32061 0.607405 1.39769 0.174395 0.464104 3.34841 3.59932 1.57381 1.41317 0.437663 0.925521 0.223559 0.564258 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
IPR014716Fibrinogen_a/b/g_C_1
IPR002181Fibrinogen_a/b/g_C_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060014 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
10020030040050060070080090010001100Sequence
Match NameE-valueIdentityDescription
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