TCONS_00060855 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060855
Unique NameTCONS_00060855
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2845

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060855 ID=TCONS_00060855|Name=TCONS_00060855|organism=Clytia hemisphaerica|type=transcript|length=2845bp
tttttgcttgtttgcTTCAACAAAACAATAGTCAAAATCACCAAAAGTTA
AACAATGACAGTGGATTTTGATGAGCGGACATGTGGGTGAAACAACTGTC
GTCACCAGTCCTCGTCTTCATTTTCATCCTCCTCTTTATCCAAAATAATC
ATGgGTCAGAGGTGGACTCCGAAGAAGAGGCTGCTTCATTTCTTCTCCAG
AAATCACTGATCAAAGCACGAATGAAAATCAACAGACATGTTATCCATAG
ACGACAAGCGTTATATCATCATTTTGTTGAACTGGAGGACAACTTTTTCG
AGGAAAACGATGCAGACTCTGATAATGATGCGGATGGCGACGGTCGTGAT
GTAGACCAAGAGGAAAACATTAGACTAGAAACAAGGAATCTTACATCTGA
TGCCATATCGGATTCCACGAAAAACGAATTCGAAAATCCTTTCGATGACG
AAGATATAGAAGAATCAGGAGCTCATAGACCATCAGATGATCCCAATGTA
GCCTACACAACATTGACAAGACAGAACGATGATAAAAGTATTGAAACAGG
TTTAAAGGATGGACTGCAGGCTAAGGTACAACACCCTGTTCTAAAGAGAA
ACCATACAACAAACAATACGAAACGTCATCACAAAAATAATAACCAATCA
ACAACTGTTATAAAAGACTTATCCACAAAACAGTTTATTCAGTCGAAAAC
GTATGAACCACGACTACGTGAAAATAGAAGTATTCAAAATGAACATGATC
cttttggaaaattgaaaaggAACACGACTTTTCCTAGATTCTTACCATCA
GATAGAAGAAGATCGAACTCTACGCTTGGCACAGGCATCTCTGATAGCGA
AaactcaaaaacaacaaaaatacaGGAATCAAAGCCAATGCTCCCTATAA
ATatcaatgttaaaaaagactttaaatcaaataaaacaCATGGAGACATA
GACACAGACATAGATAATGAACAAGACTTACGCTTAACTAATAGACTGAA
ATCGAACGCGCAACTTCGCACACGCATAAATGCTATAAAAGATTCACACT
TGACAAACCGATCGAAATCGAACGGGCAACAGCGTACAGACATCGGTGTT
TTAAAAGACCCACACTTAACTAACCGATCGAAATCGAATGCGCAACTGCG
TACAGGTATAGACGATAAACAAGTCTCACGGTTAACTAATACACTAAAAT
CGAAAGCGCAACTGCGTACAGACATAAATGCTATAAACGGCCCAGTATTC
GGCGACGAAATCATTCACCAAACATCAATTGCGCATGCTCCATGTCAACC
ACAACCAGGATGTAACCTCATGCTCATCCCAAACACCGTCCCTTCACATA
AGAACGAAGAAAAGTATTTACTATCTCAGGCGCATGCGCTTAAACAAAAT
GCTCAACTCATGTCCATGCAAGCGGATATCCTAGAACACGAGGTAACTTC
CATCAAGGGCGGAAGCGGACAACACGTAATGACAGTTGAAGGCGGCCACC
CTTTACAAGGTTTACACGCCCATAATATGCGTTTACacaatgattatttt
aatgttgaTAAACCGGTTCATTTGCCTTCCGGGCACCACGGGCACGGTCC
GGAACACGGTGGTACTGAAGACCTGATTCATAATGCTGAACATTATAAGG
AAGGAGATTCTCATGACGGAGGTGGTAGCCTCAAGGTGGAAGGCGGGAGC
AAGATACAGTCTATAGGGACTGGGTATCCGCAATATAATTTACCAACCAA
ACCAATGGGTGGAGGGGGAGCTTCAGGTGCGGCAGGTGCTAGCAGTAGTG
GTGGTTTATTCGAATTCGTTAGACCTTTGCCACCTGCGGCAGGACCCAAC
CCGTATGAAGTATTGACGTCCGCTACCCTTGGTCAAGACTACCCAGGGGT
GTCTCAGAAACAATCAGCTTCAGCCATGGGTTTCAACGAAGCTGGCGGAG
CTGGTATGCAATAtgaagtgctgacgtcagctaATCTTGGTAAAGAACTA
CCTGGTGTAACGCAGGAGCAATCTGCGGCAGCCATGGGTTTTAATAATGG
CGGTGGAGGTGCTATGGTGATTTCGAAACCGATGAAATTTGTTGTTTCTT
TGAAAGGACTTAAAGTCAAAGAACAGAAAGCTCAGAAGCTGATCAATTTC
ACTGTAAAGAGAGATGGGGGTAAAAGTGACTAGGCTACATTCGAAacgta
aaataaataaaacgcGAAAAAAGAGGGAAAAGCGCCGTAAAAGACGAGAA
AGACGTAAATTGAAGATTCATAACGGACGTTAAATTGATTGACATAAAAT
GgcttaagaaaaaataaaaaaagaaaagttgaagTCTCGCAGTGTAATTG
TAATTGTGTCCACTAAAATATCATTGGACGTTATTGATATATTTTGTGCC
ACCCAAGTAGGCCCCAaatggacttttccagaaaaaaaacgtataccccC
TGCTATTCCAAGAAGGTAAGGTTTTATAtatggcggaattccatagggag
atgcAAATGGtagtagctttttaaatcctactaaaactcacaattccaga
ggggtttaaacctgaaattgcctggaattccagagggttacagcatttcc
agccacagaggTATGGACCTCCTCTACAGggggtatacgttttttttttc
tggaatagcccaatcttTTTGGGAAAACTTATGAAAAGAAAGCAAACAAT
CGTGTTGGATGATAAATTAAAGTCGTGTTCATGAAAAGATAGATAGATAA
TTGCAAATAAATAGACTTCTCTTCACTCTTTGTCTTTACTTTGGAGCCGG
ACAACGACCAGGGTCTCTTCTATCTCATCATAGCTGCGAATTCTA
Run BLAST on NCBI

protein sequence of TCONS_00060855-protein

>TCONS_00060855-protein ID=TCONS_00060855-protein|Name=TCONS_00060855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=700bp
MWVKQLSSPVLVFIFILLFIQNNHGSEVDSEEEAASFLLQKSLIKARMKI
NRHVIHRRQALYHHFVELEDNFFEENDADSDNDADGDGRDVDQEENIRLE
TRNLTSDAISDSTKNEFENPFDDEDIEESGAHRPSDDPNVAYTTLTRQND
DKSIETGLKDGLQAKVQHPVLKRNHTTNNTKRHHKNNNQSTTVIKDLSTK
QFIQSKTYEPRLRENRSIQNEHDPFGKLKRNTTFPRFLPSDRRRSNSTLG
TGISDSENSKTTKIQESKPMLPININVKKDFKSNKTHGDIDTDIDNEQDL
RLTNRLKSNAQLRTRINAIKDSHLTNRSKSNGQQRTDIGVLKDPHLTNRS
KSNAQLRTGIDDKQVSRLTNTLKSKAQLRTDINAINGPVFGDEIIHQTSI
AHAPCQPQPGCNLMLIPNTVPSHKNEEKYLLSQAHALKQNAQLMSMQADI
LEHEVTSIKGGSGQHVMTVEGGHPLQGLHAHNMRLHNDYFNVDKPVHLPS
GHHGHGPEHGGTEDLIHNAEHYKEGDSHDGGGSLKVEGGSKIQSIGTGYP
QYNLPTKPMGGGGASGAAGASSSGGLFEFVRPLPPAAGPNPYEVLTSATL
GQDYPGVSQKQSASAMGFNEAGGAGMQYEVLTSANLGKELPGVTQEQSAA
AMGFNNGGGGAMVISKPMKFVVSLKGLKVKEQKAQKLINFTVKRDGGKSD
Run BLAST on NCBI

transcript from alignment at scaffold_349:472566..478578-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060855 ID=TCONS_00060855|Name=TCONS_00060855|organism=Clytia hemisphaerica|type=transcript|length=6013bp|location=Sequence derived from alignment at scaffold_349:472566..478578- (Clytia hemisphaerica)
TTTTTGCTTGTTTGCTTCAACAAAACAATAGGTAAGTAAGAATTGTTACA TTTTTGTACTTTAAAATGTTTTATGTTTTTATGTAATATTTTAGACAGTA CCGGCTTGATGGTTTTCACAAAATATTAACAGTTTTGCTATAAACACAAG TTGAGAAGTTAGTTGCAGGATCTCAATGTTTAGAGTGTTTTAAATAACTG TTTTCTTGCGCTTGAATGAATTTGAAACTATAATTTAAAGTTTGTTTTTG CTTAAAATTAGCAACCATTAAAAAATGCAATTAACAGACCATTCGACTGT TCGAATCAGTTTAAGCAATGTTAATTTATGCCTTTTTGATTTAAACACGT ATTTTTGGCTGGTTGAAAATCTGGTCAGAAATGCTCGTCTGGTTAAGAAT GGTTTGATTTTTCTTTGTTTGGTTTTAACTGTGCTATGAGAGAAAGGTTG GTCTGCAAAACTGATTTTTTATATTGTAGTGAACTACACGCTAAGGGGGT ACATGTTTTAATTAATAATTTAGAGTATTGTATATCATGGTCAAAATATA TTGAGATTTAAGTGCATTTCAACGTTTTTCATAATTTAAAGTTCGGGCGA GATTGCTATTTTAGGTTATTTTTAGCTTTCTTTCATTGAATATTTCAATT TTGGAGGGGTTCGGTGGCTTCTAGGCTATATTCCAAGCCTTATTTGAGCA AATTTGAGCTTTTAAATCCTGAGATTCTGAAGTCTTAAAGTCTCATGTTA AAACTCAGAGTTAAAACTCTCTTACCAACTGTAGTTTAACGCACTTAAAA ATCATTTGTGGTGTTTAAAATTCCGCAGGAAAATCCCCTTTGTCTCAAAT ATTTTGTCCATGATTGAAGATTATGTAAAAACTATTTTCTCTTGTGCTCT TCCAGTCAAAATCACCAAAAGTTAAACAATGACAGTGGATTTTGATGAGC GGACATGTGGGTGAAACAACTGTCGTCACCAGTCCTCGTCTTCATTTTCA TCCTCCTCTTTATCCAAAATAATCATGGTAAGTCTAAAGGCTTGGGGACA CGAGAAGTTTTTTCGCGTTGATGCAATGCAACATGCTCTGTCCCACCAAC CTGAAACGCTTTCTCGTGTCTCCACCCCATTTTTCTTTTAATAACATTTG TGCTTCTCTAACTTTTGTTCTAATCAGCGTGTCTTTTGGGTATTTTCCTT ATTTTTTGTCCCGTGAGCATGTTGCATTGGGCTCTTCCAGTAAATGTCCG TACATGGGGGGGGGGGTGGAGGATATATTGTCCGGGGGTAGTGAAAAATC ATCAAAATTTGCCTTGTTCGGGGGTAAATTTTGCTCTGTCCGGGGGTAAT TTGAGTTGTCCAGGGGGTCAACTGATGCTTGTCTGGGAGGGGCAGGGGGC AAAAGTCACTTTGTCCGGGGGTAAATCATTGAAAATTGTTCATAATCAAA ATTTGCCTTGTTCGGGGGTAAATTTTGCTCTGTCCGGGGGTAATTTGAGT TGTCCAGGGGGTCAACTGATGCTTGTCTGGGAGGGGCAGGGGGCAAAAGT CACTTTGTCCGGGGGTAAATCATTGAAAATTGTTCATAATCAAAATTTGC CTTGTTCGGGGGTAAATTTTGCTCTGTCCGGGGGTAATTTGAGTTGTCCA GGGGGTCAACTGATGCTTGTCTGGGAGGGGCAGGGGGCAAAAGTCACTTT GTCCGGGGGTAAATCATTGAAAATTGTTATATCCTCTAACCCCCATATTC AAATTCTTTCTAAGCCTATTATACAATTTTTTGGTAAAAGTCCATCTTAG CCTAGGGGGCCTTTATTGAATTTATTCATATGAATTCCTTGATCCTATTT GCTTTTCCATGTAAGAGGCAATCAAGGAGTTAGACGATTTTTTATTAGGA GTAAATCAAAATTGAAAATTCCTTTCACCTAAGCTTTTTTTTCAAAAATG AGGTAAAATTTCGTTATGTTGAGGGTTCCTTGAAAGATTCCCGAAGATAA TATTGTCTTCAAAATTCATCTGCATGTTCTTTCTTACCTACTTTAATGGG ATAAATTTTCGCGGGGATTAAATTTCGCGGTTGAGCTCATCCGCGAACTT TTAAGATTTCGCGGGGATTAATTTTCGCGGATGAGGGATTTCCTGATTTT TCGCGGGGATTTAATTTCGCGGATTGGGGTACAAATTAAAATTTTTGAAA AGAGTCAAAACATTGAAATAAAATTTTTCCAGGAAATTAAGAATTTTTTT TTCAAGTAATAAGAGGGTGTTTTGGAATAGGGCGAGGTGATATGTATTAC AACTATCAAAAGTTGAATTTGAACTTCCATGGTGCGGAGCTAAATTTTCA CAGCCTATTTGGGAAAAAATCTTACATATCCTTTTAAATGTTTAATTTCA AGTCAGTTGGATTACCCTCTTGCATTGAAAAGCTTTTAACAATAAGCGAT CACTTTAGATAAAAATTTTTCCAATACCGCTTCCAAGTTTGTAAATTTGT GAAGAAAATTTTGAGGAAAACGATTTTTTGCTAACAAGCATATCGAGGAT TTGACCTTTTTCGAGGGTTGCCTCATGTAGAAAAAAATAAATAAAAAACG ATAAAAATAGAAATTTCGCGGATTGCAAAAAAAATTCAAATTTTTCGCGG GAACTAATTTTCGCGGATGGGCCTTTCTCAAATTTCCAATGGGAATTATT TTCGCGGATGACACCCAAATCCGCGAAATCCGCGAAAATTAATCCCCGCG AAAATTTATCCCATTAAAGTAATAGCCGATGGGGGGATTGGAATAAGCAG GGGTTGGAAAAATATACAAAACTTAATAAGCGAGGGGGGGGTTGGAATAA AAATGTCCTGGGTAGAAAATTTTTAAAAAGGAGGTTAATACTGCAGATTT AAAACAAAAGAGGGAACTTTCAAAAACATTTTCCCAAAAAAAAATAAGCG GGGGGTTGGAATAAGAATGTCCTGGGTGGAAAATTTTTGAAAAATTTATT AGCGGAGGGGGGAGGGGCTATTAGGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNGGCTATTAGGTACCCGAGAGTAAGAATTGTTTGAAATTTGGTTG GATTTTCTCAATGTAAATAAAAATGTTAATATAAATTAAAAGTTTGCACA ATTTGAAAATGTTTTTTTGCATTTTCCAGGGTCAGAGGTGGACTCCGAAG AAGAGGCTGCTTCATTTCTTCTCCAGAAATCACTGATCAAAGCACGAATG AAAATCAACAGACATGTTATCCATAGACGACAAGCGTTATATCATCATTT TGTTGAACTGGAGGACAACTTTTTCGAGGAAAACGATGCAGACTCTGATA ATGATGCGGATGGCGACGGTCGTGATGTAGACCAAGAGGAAAACATTAGA CTAGAAACAAGGAATNTGAGGAAAACGATGCAGACCCTGATAATGATGAG GATGGCGACGGTTGTGATGTAGACCGAGAGGAAAACATTAGACTAGAAAC AAGGAATCTTACATCTGATGCCATATCGGATTCCACGAAAAACGAATTCG AAAATCCTTTCGATGACGAAGATATAGAAGAATCAGGAGCTCATAGACCA TCAGATGATCCCAATGTAGCCTACACAACATTGACAAGACAGAACGATGA TAAAAGTATTGAAACAGGTTTAAAGGATGGACTGCAGGCTAAGGTACAAC ACCCTGTTCTAAAGAGAAACCATACAACAAACAATACGAAACGTCATCAC AAAAATAATAACCAATCAACAACTGTTATAAAAGACTTATCCACAAAACA GTTTATTCAGTCGAAAACGTATGAACCACGACTACGTGAAAATAGAAGTA TTCAAAATGAACATGATCCTTTTGGAAAATTGAAAAGGAACACGACTTTT CCTAGATTCTTACCATCAGATAGAAGAAGATCGAACTCTACGCTTGGCAC AGGCATCTCTGATAGCGAAAACTCAAAAACAACAAAAATACAGGAATCAA AGCCAATGCTCCCTATAAATATCAATGTTAAAAAAGACTTTAAATCAAAT AAAACACATGGAGACATAGACACAGACATAGATAATGAACAAGACTTACG CTTAACTAATAGACTGAAATCGAACGCGCAACTTCGCACACGCATAAATG CTATAAAAGATTCACACTTGACAAACCGATCGAAATCGAACGGGCAACAG CGTACAGACATCGGTGTTTTAAAAGACCCACACTTAACTAACCGATCGAA ATCGAATGCGCAACTGCGTACAGGTATAGACGATAAACAAGTCTCACGGT TAACTAATACACTAAAATCGAAAGCGCAACTGCGTACAGACATAAATGCT ATAAACGGCCCAGTATTCGGCGACGAAATCATTCACCAAACATCAATTGC GCATGCTCCATGTCAACCACAACCAGGATGTAACCTCATGCTCATCCCAA ACACCGTCCCTTCACATAAGAACGAAGAAAAGTATTTACTATCTCAGGCG CATGCGCTTAAACAAAATGCTCAACTCATGTCCATGCAAGCGGATATCCT AGAACACGAGGTAACTTCCATCAAGGGCGGAAGCGGACAACACGTAATGA CAGTTGAAGGCGGCCACCCTTTACAAGGTTTACACGCCCATAATATGCGT TTACACAATGATTATTTTAATGTTGATAAACCGGTTCATTTGCCTTCCGG GCACCACGGGCACGGTCCGGAACACGGTGGTACTGAAGACCTGATTCATA ATGCTGAACATTATAAGGAAGGAGATTCTCATGACGGAGGTGGTAGCCTC AAGGTGGAAGGCGGGAGCAAGATACAGTCTATAGGGACTGGGTATCCGCA ATATAATTTACCAACCAAACCAATGGGTGGAGGGGGAGCTTCAGGTGCGG CAGGTGCTAGCAGTAGTGGTGGTTTATTCGAATTCGTTAGACCTTTGCCA CCTGCGGCAGGACCCAACCCGTATGAAGTATTGACGTCCGCTACCCTTGG TCAAGACTACCCAGGGGTGTCTCAGAAACAATCAGCTTCAGCCATGGGTT TCAACGAAGCTGGCGGAGCTGGTATGCAATATGAAGTGCTGACGTCAGCT AATCTTGGTAAAGAACTACCTGGTGTAACGCAGGAGCAATCTGCGGCAGC CATGGGTTTTAATAATGGCGGTGGAGGTGCTATGGTGATTTCGAAACCGA TGAAATTTGTTGTTTCTTTGAAAGGACTTAAAGTCAAAGAACAGAAAGCT CAGAAGCTGATCAATTTCACTGTAAAGAGAGATGGGGGTAAAAGTGACTA GGCTACATTCGAAACGTAAAATAAATAAAACGCGAAAAAAGAGGGAAAAG CGCCGTAAAAGACGAGAAAGACGTAAATTGAAGATTCATAACGGACGTTA AATTGATTGACATAAAATGGCTTAAGAAAAAATAAAAAAAGAAAAGTTGA AGTCTCGCAGTGTAATTGTAATTGTGTCCACTAAAATATCATTGGACGTT ATTGATATATTTTGTGCCACCCAAGTAGGCCCCAAATGGACTTTTCCAGA AAAAAAACGTATACCCCCTGCTATTCCAAGAAGGTAAGGTTTTATATATG GCGGAATTCCATAGGGAGATGCAAATGGTAGTAGCTTTTTAAATCCTACT AAAACTCACAATTCCAGAGGGGTTTAAACCTGAAATTGCCTGGAATTCCA GAGGGTTACAGCATTTCCAGCCACAGAGGTATGGACCTCCTCTACAGGGG GTATACGTTTTTTTTTTCTGGAATAGCCCAATCTTTTTGGGAAAACTTAT GAAAAGAAAGCAAACAATCGTGTTGGATGATAAATTAAAGTCGTGTTCAT GAAAAGATAGATAGATAATTGCAAATAAATAGACTTCTCTTCACTCTTTG TCTTTACTTTGGAGCCGGACAACGACCAGGGTCTCTTCTATCTCATCATA GCTGCGAATTCTA

Coding sequence (CDS) from alignment at scaffold_349:472566..478578-

>TCONS_00060855 ID=TCONS_00060855|Name=TCONS_00060855|organism=Clytia hemisphaerica|type=CDS|length=6309bp|location=Sequence derived from alignment at scaffold_349:472566..478578- (Clytia hemisphaerica)
ATTAGACTAGAAACAAGGAATCTTACATCTGATGCCATATCGGATTCCAC
GAAAAACGAATTCGAAAATCCTTTCGATGACGAAGATATAGAAGAATCAG
GAGCTCATAGACCATCAGATGATCCCAATGTAGCCTACACAACATTGACA
AGACAGAACGATGATAAAAGTATTGAAACAGGTTTAAAGGATGGACTGCA
GGCTAAGGTACAACACCCTGTTCTAAAGAGAAACCATACAACAAACAATA
CGAAACGTCATCACAAAAATAATAACCAATCAACAACTGTTATAAAAGAC
TTATCCACAAAACAGTTTATTCAGTCGAAAACGTATGAACCACGACTACG
TGAAAATAGAAGTATTCAAAATGAACATGATCCTTTTGGAAAATTGAAAA
GGAACACGACTTTTCCTAGATTCTTACCATCAGATAGAAGAAGATCGAAC
TCTACGCTTGGCACAGGCATCTCTGATAGCGAAAACTCAAAAACAACAAA
AATACAGGAATCAAAGCCAATGCTCCCTATAAATATCAATGTTAAAAAAG
ACTTTAAATCAAATAAAACACATGGAGACATAGACACAGACATAGATAAT
GAACAAGACTTACGCTTAACTAATAGACTGAAATCGAACGCGCAACTTCG
CACACGCATAAATGCTATAAAAGATTCACACTTGACAAACCGATCGAAAT
CGAACGGGCAACAGCGTACAGACATCGGTGTTTTAAAAGACCCACACTTA
ACTAACCGATCGAAATCGAATGCGCAACTGCGTACAGGTATAGACGATAA
ACAAGTCTCACGGTTAACTAATACACTAAAATCGAAAGCGCAACTGCGTA
CAGACATAAATGCTATAAACGGCCCAGTATTCGGCGACGAAATCATTCAC
CAAACATCAATTGCGCATGCTCCATGTCAACCACAACCAGGATGTAACCT
CATGCTCATCCCAAACACCGTCCCTTCACATAAGAACGAAGAAAAGTATT
TACTATCTCAGGCGCATGCGCTTAAACAAAATGCTCAACTCATGTCCATG
CAAGCGGATATCCTAGAACACGAGGTAACTTCCATCAAGGGCGGAAGCGG
ACAACACGTAATGACAGTTGAAGGCGGCCACCCTTTACAAGGTTTACACG
CCCATAATATGCGTTTACACAATGATTATTTTAATGTTGATAAACCGGTT
CATTTGCCTTCCGGGCACCACGGGCACGGTCCGGAACACGGTGGTACTGA
AGACCTGATTCATAATGCTGAACATTATAAGGAAGGAGATTCTCATGACG
GAGGTGGTAGCCTCAAGGTGGAAGGCGGGAGCAAGATACAGTCTATAGGG
ACTGGGTATCCGCAATATAATTTACCAACCAAACCAATGGGTGGAGGGGG
AGCTTCAGGTGCGGCAGGTGCTAGCAGTAGTGGTGGTTTATTCGAATTCG
TTAGACCTTTGCCACCTGCGGCAGGACCCAACCCGTATGAAGTATTGACG
TCCGCTACCCTTGGTCAAGACTACCCAGGGGTGTCTCAGAAACAATCAGC
TTCAGCCATGGGTTTCAACGAAGCTGGCGGAGCTGGTATGCAATATGAAG
TGCTGACGTCAGCTAATCTTGGTAAAGAACTACCTGGTGTAACGCAGGAG
CAATCTGCGGCAGCCATGGGTTTTAATAATGGCGGTGGAGGTGCTATGGT
GATTTCGAAACCGATGAAATTTGTTGTTTCTTTGAAAGGACTTAAAGTCA
AAGAACAGAAAGCTCAGAAGCTGATCAATTTCACTGTAAAGAGAGATGGG
GGTAAAAGTGACTAGGGTCAGAGGTGGACTCCGAAGAAGAGGCTGCTTCA
TTTCTTCTCCAGAAATCACTGATCAAAGCACGAATGAAAATCAACAGACA
TGTTATCCATAGACGACAAGCGTTATATCATCATTTTGTTGAACTGGAGG
ACAACTTTTTCGAGGAAAACGATGCAGACTCTGATAATGATGCGGATGGC
GACGGTCGTGATGTAGACCAAGAGGAAAACATGTGGGTGAAACAACTGTC
GTCACCAGTCCTCGTCTTCATTTTCATCCTCCTCTTTATCCAAAATAATC
ATGATTAGACTAGAAACAAGGAATCTTACATCTGATGCCATATCGGATTC
CACGAAAAACGAATTCGAAAATCCTTTCGATGACGAAGATATAGAAGAAT
CAGGAGCTCATAGACCATCAGATGATCCCAATGTAGCCTACACAACATTG
ACAAGACAGAACGATGATAAAAGTATTGAAACAGGTTTAAAGGATGGACT
GCAGGCTAAGGTACAACACCCTGTTCTAAAGAGAAACCATACAACAAACA
ATACGAAACGTCATCACAAAAATAATAACCAATCAACAACTGTTATAAAA
GACTTATCCACAAAACAGTTTATTCAGTCGAAAACGTATGAACCACGACT
ACGTGAAAATAGAAGTATTCAAAATGAACATGATCCTTTTGGAAAATTGA
AAAGGAACACGACTTTTCCTAGATTCTTACCATCAGATAGAAGAAGATCG
AACTCTACGCTTGGCACAGGCATCTCTGATAGCGAAAACTCAAAAACAAC
AAAAATACAGGAATCAAAGCCAATGCTCCCTATAAATATCAATGTTAAAA
AAGACTTTAAATCAAATAAAACACATGGAGACATAGACACAGACATAGAT
AATGAACAAGACTTACGCTTAACTAATAGACTGAAATCGAACGCGCAACT
TCGCACACGCATAAATGCTATAAAAGATTCACACTTGACAAACCGATCGA
AATCGAACGGGCAACAGCGTACAGACATCGGTGTTTTAAAAGACCCACAC
TTAACTAACCGATCGAAATCGAATGCGCAACTGCGTACAGGTATAGACGA
TAAACAAGTCTCACGGTTAACTAATACACTAAAATCGAAAGCGCAACTGC
GTACAGACATAAATGCTATAAACGGCCCAGTATTCGGCGACGAAATCATT
CACCAAACATCAATTGCGCATGCTCCATGTCAACCACAACCAGGATGTAA
CCTCATGCTCATCCCAAACACCGTCCCTTCACATAAGAACGAAGAAAAGT
ATTTACTATCTCAGGCGCATGCGCTTAAACAAAATGCTCAACTCATGTCC
ATGCAAGCGGATATCCTAGAACACGAGGTAACTTCCATCAAGGGCGGAAG
CGGACAACACGTAATGACAGTTGAAGGCGGCCACCCTTTACAAGGTTTAC
ACGCCCATAATATGCGTTTACACAATGATTATTTTAATGTTGATAAACCG
GTTCATTTGCCTTCCGGGCACCACGGGCACGGTCCGGAACACGGTGGTAC
TGAAGACCTGATTCATAATGCTGAACATTATAAGGAAGGAGATTCTCATG
ACGGAGGTGGTAGCCTCAAGGTGGAAGGCGGGAGCAAGATACAGTCTATA
GGGACTGGGTATCCGCAATATAATTTACCAACCAAACCAATGGGTGGAGG
GGGAGCTTCAGGTGCGGCAGGTGCTAGCAGTAGTGGTGGTTTATTCGAAT
TCGTTAGACCTTTGCCACCTGCGGCAGGACCCAACCCGTATGAAGTATTG
ACGTCCGCTACCCTTGGTCAAGACTACCCAGGGGTGTCTCAGAAACAATC
AGCTTCAGCCATGGGTTTCAACGAAGCTGGCGGAGCTGGTATGCAATATG
AAGTGCTGACGTCAGCTAATCTTGGTAAAGAACTACCTGGTGTAACGCAG
GAGCAATCTGCGGCAGCCATGGGTTTTAATAATGGCGGTGGAGGTGCTAT
GGTGATTTCGAAACCGATGAAATTTGTTGTTTCTTTGAAAGGACTTAAAG
TCAAAGAACAGAAAGCTCAGAAGCTGATCAATTTCACTGTAAAGAGAGAT
GGGGGTAAAAGTGACTAGGGTCAGAGGTGGACTCCGAAGAAGAGGCTGCT
TCATTTCTTCTCCAGAAATCACTGATCAAAGCACGAATGAAAATCAACAG
ACATGTTATCCATAGACGACAAGCGTTATATCATCATTTTGTTGAACTGG
AGGACAACTTTTTCGAGGAAAACGATGCAGACTCTGATAATGATGCGGAT
GGCGACGGTCGTGATGTAGACCAAGAGGAAAACATGTGGGTGAAACAACT
GTCGTCACCAGTCCTCGTCTTCATTTTCATCCTCCTCTTTATCCAAAATA
ATCATGATTAGACTAGAAACAAGGAATCTTACATCTGATGCCATATCGGA
TTCCACGAAAAACGAATTCGAAAATCCTTTCGATGACGAAGATATAGAAG
AATCAGGAGCTCATAGACCATCAGATGATCCCAATGTAGCCTACACAACA
TTGACAAGACAGAACGATGATAAAAGTATTGAAACAGGTTTAAAGGATGG
ACTGCAGGCTAAGGTACAACACCCTGTTCTAAAGAGAAACCATACAACAA
ACAATACGAAACGTCATCACAAAAATAATAACCAATCAACAACTGTTATA
AAAGACTTATCCACAAAACAGTTTATTCAGTCGAAAACGTATGAACCACG
ACTACGTGAAAATAGAAGTATTCAAAATGAACATGATCCTTTTGGAAAAT
TGAAAAGGAACACGACTTTTCCTAGATTCTTACCATCAGATAGAAGAAGA
TCGAACTCTACGCTTGGCACAGGCATCTCTGATAGCGAAAACTCAAAAAC
AACAAAAATACAGGAATCAAAGCCAATGCTCCCTATAAATATCAATGTTA
AAAAAGACTTTAAATCAAATAAAACACATGGAGACATAGACACAGACATA
GATAATGAACAAGACTTACGCTTAACTAATAGACTGAAATCGAACGCGCA
ACTTCGCACACGCATAAATGCTATAAAAGATTCACACTTGACAAACCGAT
CGAAATCGAACGGGCAACAGCGTACAGACATCGGTGTTTTAAAAGACCCA
CACTTAACTAACCGATCGAAATCGAATGCGCAACTGCGTACAGGTATAGA
CGATAAACAAGTCTCACGGTTAACTAATACACTAAAATCGAAAGCGCAAC
TGCGTACAGACATAAATGCTATAAACGGCCCAGTATTCGGCGACGAAATC
ATTCACCAAACATCAATTGCGCATGCTCCATGTCAACCACAACCAGGATG
TAACCTCATGCTCATCCCAAACACCGTCCCTTCACATAAGAACGAAGAAA
AGTATTTACTATCTCAGGCGCATGCGCTTAAACAAAATGCTCAACTCATG
TCCATGCAAGCGGATATCCTAGAACACGAGGTAACTTCCATCAAGGGCGG
AAGCGGACAACACGTAATGACAGTTGAAGGCGGCCACCCTTTACAAGGTT
TACACGCCCATAATATGCGTTTACACAATGATTATTTTAATGTTGATAAA
CCGGTTCATTTGCCTTCCGGGCACCACGGGCACGGTCCGGAACACGGTGG
TACTGAAGACCTGATTCATAATGCTGAACATTATAAGGAAGGAGATTCTC
ATGACGGAGGTGGTAGCCTCAAGGTGGAAGGCGGGAGCAAGATACAGTCT
ATAGGGACTGGGTATCCGCAATATAATTTACCAACCAAACCAATGGGTGG
AGGGGGAGCTTCAGGTGCGGCAGGTGCTAGCAGTAGTGGTGGTTTATTCG
AATTCGTTAGACCTTTGCCACCTGCGGCAGGACCCAACCCGTATGAAGTA
TTGACGTCCGCTACCCTTGGTCAAGACTACCCAGGGGTGTCTCAGAAACA
ATCAGCTTCAGCCATGGGTTTCAACGAAGCTGGCGGAGCTGGTATGCAAT
ATGAAGTGCTGACGTCAGCTAATCTTGGTAAAGAACTACCTGGTGTAACG
CAGGAGCAATCTGCGGCAGCCATGGGTTTTAATAATGGCGGTGGAGGTGC
TATGGTGATTTCGAAACCGATGAAATTTGTTGTTTCTTTGAAAGGACTTA
AAGTCAAAGAACAGAAAGCTCAGAAGCTGATCAATTTCACTGTAAAGAGA
GATGGGGGTAAAAGTGACTAGGGTCAGAGGTGGACTCCGAAGAAGAGGCT
GCTTCATTTCTTCTCCAGAAATCACTGATCAAAGCACGAATGAAAATCAA
CAGACATGTTATCCATAGACGACAAGCGTTATATCATCATTTTGTTGAAC
TGGAGGACAACTTTTTCGAGGAAAACGATGCAGACTCTGATAATGATGCG
GATGGCGACGGTCGTGATGTAGACCAAGAGGAAAACATGTGGGTGAAACA
ACTGTCGTCACCAGTCCTCGTCTTCATTTTCATCCTCCTCTTTATCCAAA
ATAATCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038216XLOC_038216Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060855-proteinTCONS_00060855-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060855-exon-scaffold_349-1575043694:478548..478578TCONS_00060855-exon-scaffold_349-1575043694:478548..478578Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1575043694:477552..477673TCONS_00060855-exon-scaffold_349-1575043694:477552..477673Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1575043694:475135..475349TCONS_00060855-exon-scaffold_349-1575043694:475135..475349Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1575043694:472566..475042TCONS_00060855-exon-scaffold_349-1575043694:472566..475042Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1510915933:478548..478578TCONS_00060855-exon-scaffold_349-1510915933:478548..478578Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1510915933:477552..477673TCONS_00060855-exon-scaffold_349-1510915933:477552..477673Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1510915933:475135..475349TCONS_00060855-exon-scaffold_349-1510915933:475135..475349Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1510915933:472566..475042TCONS_00060855-exon-scaffold_349-1510915933:472566..475042Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1491911889:478548..478578TCONS_00060855-exon-scaffold_349-1491911889:478548..478578Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1491911889:477552..477673TCONS_00060855-exon-scaffold_349-1491911889:477552..477673Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1491911889:475135..475349TCONS_00060855-exon-scaffold_349-1491911889:475135..475349Clytia hemisphaericaexon
TCONS_00060855-exon-scaffold_349-1491911889:472566..475042TCONS_00060855-exon-scaffold_349-1491911889:472566..475042Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:472566..478578 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0235327 0.0223457 0 0 0.0309392 0.0478489 0.591715 0.789119 0.191682 0.177791 0.466478 0.257104 1.18192 0.410032 0.213876 1.00896 0.202934 0 0.0409673 0.0158568 0.0904518 0.0811976 0.0790761 0 0.727432 0.9388 0.0401741 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060855 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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