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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061733 ID=TCONS_00061733|Name=TCONS_00061733|organism=Clytia hemisphaerica|type=transcript|length=2070bp
GTTCCATGCGTCGTTGACAGTCTTCCACGTGTTGGTTGGTACTCTTCTAG
CTGACTGGAATGGTGAAGCAGATGCAAACGTTTCTCTTTGACAGTGTTTG
TTAAGTGGAGATAGGTCAACAGTCCGCCTTGGGGACCCATCGTGCTTTCG
TGTCACTACCATACGGTGACACCATTTCACTGGCTCGCCATAAGGGACTC
TCTCGATTACACCCAATGCTTCGTCACGAAGGAGATCCTTGTGCACTTGG
TCCTGCCAATGAATTGGTATCGATGCTGGAGTGTGCACAGCTTTTGGAAC
AGCGTTAGGCTTAAGATGGATCTCAACCGGTGGACCATCCATTTGTGGCA
GCCGCTGGTGTGGGCAGGTATTGAAAGTAGACGACGCAAAATAATCAAGC
AGCCACTCCTTCATCTTGTCGTTGTTCTCTGGAATGCATTCAAATGGAAG
CTCCTTTGGAAATTCGGGGATGGTGGTGCGAGTAGGACAGGAACATGACT
CCTCTGGAATGAGGTCTTCAACCACTGCATTGGTAGGGTGAACAGTAGAC
GAGGGTTTGATGGCAGGAAAGTCCTTAGGTACAATTCCAAGGTCCATCAT
GTTCTCCAGCGAAAGGTAAAATCCTTGGGCTTGTCTGCTGATGTAGACCA
TTGTAGCACACAACCGTTTTGAGCCATCATATGCAGTACCCTCCAGACGA
ACACGTGCAGCCCCCTCGACTTTAATAGGAGACTTATTGGCTGCCATGAG
GTTGATGCTGACCGGAATCAGGTCATCCTTGGTAAACCCAAGCGATTCAA
ACTCATCCATTGACCATAAACATGATTGCGCACCCGTGTCAGCAAGTGCC
ATTATCTTAGATGGGGCAATACTAGGGCATCTTTTGCCAAATTGTTTATA
GTCAGAAGACAAAACGGACAATAAGAGTTCTACCCTAGGGTGTTCCTTGA
ATCTTGATTTGCGCCATTGCCCTTTGGAGAAGATGTTGTGAGGCAACGGA
ATGGCATTCTGAGTGGCTCTAGAAGATTTGGTGACATCTGGTTGCGTAGA
TATTCCAGTCACTTGGGAAAACATAGGGACGGTGCTTATCTCGCTATTGG
ATGCTCCAGGTTGAGGCTGTTGGTTGGTGTCAGATCTCTCTTGACGACGT
TTGGCTCGATAGCAGTCGATACACATCTTGTGTGGCTTTCTGTTTCGTCC
TGTCCTGCCCTCCGTGAAACGTAGGTACGGCTTCCTACAACCAGGACATG
GAATCGGTGTTCCAGCGTGAGTAGCCTCAGTCTGCTTTGGCTTATGTCGA
CGATATGTTGACGAGGACACGTTCCCGACTGAGGATGGCAGTGCATCCCG
TGCCATCTCTTTGCTCTCTACAAGGGCAATAATGTCATTTATAGAAGTTT
CGAGAATGTTTGCAATACCAAGAACTTCCCGTCTGATGTCAGAATCTTCG
ATACCCGCAATTAGAACATCTCTTATAATAGAGTCTGTAAAGTCAATTGT
GTTATCGCAAGTACATCTAGTTTTGTAATTACAGGTCTCTGCCTTTCCTC
TAACCCGTGAGGAGAAAATGCGAAATTGTTCGTCGCGTTCCTGATGCATG
TTCATAAGTTCAGTTCTCGTAACACAGGTAGCAACAGCTACGACAGCTAA
TGATTTCATTGATTCTAATAGCTCGTTGGTAGGGCGATTCATGATTCCAG
GATTCGAACGCAGTAAACTATCCCCAAGAGATTGGCTCGCACATTGGAAC
AGCTGAGTGGAACAGTTATTTGCTTCGAGGCCAGATCCAATAACAAATGC
TTCCCAACGACGAAGAAATAGGTTCCATTCTTCCTGGTTCAACCCACTAT
CGACTTTCGGTCTATCCAATTTCGGTCCAGAAGGGATGCGGGCACGGCCA
CCACCCATGTGGATTGTACTGTTGGCCGACAGCAAGGTGCATGCCACAGT
TTCAGATGAGCCCGCTGGTGTTTGGTACTCACAACCAGGTACGGGACATT
GCAATTCAACCATATCAGTGTAAGATTAGCATGAAGAATATCTTATTCAT
ATGTTTTATTTATAACTATC Run BLAST on NCBI protein sequence of TCONS_00061733-protein >TCONS_00061733-protein ID=TCONS_00061733-protein|Name=TCONS_00061733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=671bp
MVELQCPVPGCEYQTPAGSSETVACTLLSANSTIHMGGGRARIPSGPKLD
RPKVDSGLNQEEWNLFLRRWEAFVIGSGLEANNCSTQLFQCASQSLGDSL
LRSNPGIMNRPTNELLESMKSLAVVAVATCVTRTELMNMHQERDEQFRIF
SSRVRGKAETCNYKTRCTCDNTIDFTDSIIRDVLIAGIEDSDIRREVLGI
ANILETSINDIIALVESKEMARDALPSSVGNVSSSTYRRHKPKQTEATHA
GTPIPCPGCRKPYLRFTEGRTGRNRKPHKMCIDCYRAKRRQERSDTNQQP
QPGASNSEISTVPMFSQVTGISTQPDVTKSSRATQNAIPLPHNIFSKGQW
RKSRFKEHPRVELLLSVLSSDYKQFGKRCPSIAPSKIMALADTGAQSCLW
SMDEFESLGFTKDDLIPVSINLMAANKSPIKVEGAARVRLEGTAYDGSKR
LCATMVYISRQAQGFYLSLENMMDLGIVPKDFPAIKPSSTVHPTNAVVED
LIPEESCSCPTRTTIPEFPKELPFECIPENNDKMKEWLLDYFASSTFNTC
PHQRLPQMDGPPVEIHLKPNAVPKAVHTPASIPIHWQDQVHKDLLRDEAL
GVIERVPYGEPVKWCHRMVVTRKHDGSPRRTVDLSPLNKHCQRETFASAS
PFQSARRVPTNTWKTVNDAWN Run BLAST on NCBI transcript from alignment at scaffold_36:652031..654100 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061733 ID=TCONS_00061733|Name=TCONS_00061733|organism=Clytia hemisphaerica|type=transcript|length=2070bp|location=Sequence derived from alignment at scaffold_36:652031..654100 (Clytia hemisphaerica)
GATAGTTATAAATAAAACATATGAATAAGATATTCTTCATGCTAATCTTA
CACTGATATGGTTGAATTGCAATGTCCCGTACCTGGTTGTGAGTACCAAA
CACCAGCGGGCTCATCTGAAACTGTGGCATGCACCTTGCTGTCGGCCAAC
AGTACAATCCACATGGGTGGTGGCCGTGCCCGCATCCCTTCTGGACCGAA
ATTGGATAGACCGAAAGTCGATAGTGGGTTGAACCAGGAAGAATGGAACC
TATTTCTTCGTCGTTGGGAAGCATTTGTTATTGGATCTGGCCTCGAAGCA
AATAACTGTTCCACTCAGCTGTTCCAATGTGCGAGCCAATCTCTTGGGGA
TAGTTTACTGCGTTCGAATCCTGGAATCATGAATCGCCCTACCAACGAGC
TATTAGAATCAATGAAATCATTAGCTGTCGTAGCTGTTGCTACCTGTGTT
ACGAGAACTGAACTTATGAACATGCATCAGGAACGCGACGAACAATTTCG
CATTTTCTCCTCACGGGTTAGAGGAAAGGCAGAGACCTGTAATTACAAAA
CTAGATGTACTTGCGATAACACAATTGACTTTACAGACTCTATTATAAGA
GATGTTCTAATTGCGGGTATCGAAGATTCTGACATCAGACGGGAAGTTCT
TGGTATTGCAAACATTCTCGAAACTTCTATAAATGACATTATTGCCCTTG
TAGAGAGCAAAGAGATGGCACGGGATGCACTGCCATCCTCAGTCGGGAAC
GTGTCCTCGTCAACATATCGTCGACATAAGCCAAAGCAGACTGAGGCTAC
TCACGCTGGAACACCGATTCCATGTCCTGGTTGTAGGAAGCCGTACCTAC
GTTTCACGGAGGGCAGGACAGGACGAAACAGAAAGCCACACAAGATGTGT
ATCGACTGCTATCGAGCCAAACGTCGTCAAGAGAGATCTGACACCAACCA
ACAGCCTCAACCTGGAGCATCCAATAGCGAGATAAGCACCGTCCCTATGT
TTTCCCAAGTGACTGGAATATCTACGCAACCAGATGTCACCAAATCTTCT
AGAGCCACTCAGAATGCCATTCCGTTGCCTCACAACATCTTCTCCAAAGG
GCAATGGCGCAAATCAAGATTCAAGGAACACCCTAGGGTAGAACTCTTAT
TGTCCGTTTTGTCTTCTGACTATAAACAATTTGGCAAAAGATGCCCTAGT
ATTGCCCCATCTAAGATAATGGCACTTGCTGACACGGGTGCGCAATCATG
TTTATGGTCAATGGATGAGTTTGAATCGCTTGGGTTTACCAAGGATGACC
TGATTCCGGTCAGCATCAACCTCATGGCAGCCAATAAGTCTCCTATTAAA
GTCGAGGGGGCTGCACGTGTTCGTCTGGAGGGTACTGCATATGATGGCTC
AAAACGGTTGTGTGCTACAATGGTCTACATCAGCAGACAAGCCCAAGGAT
TTTACCTTTCGCTGGAGAACATGATGGACCTTGGAATTGTACCTAAGGAC
TTTCCTGCCATCAAACCCTCGTCTACTGTTCACCCTACCAATGCAGTGGT
TGAAGACCTCATTCCAGAGGAGTCATGTTCCTGTCCTACTCGCACCACCA
TCCCCGAATTTCCAAAGGAGCTTCCATTTGAATGCATTCCAGAGAACAAC
GACAAGATGAAGGAGTGGCTGCTTGATTATTTTGCGTCGTCTACTTTCAA
TACCTGCCCACACCAGCGGCTGCCACAAATGGATGGTCCACCGGTTGAGA
TCCATCTTAAGCCTAACGCTGTTCCAAAAGCTGTGCACACTCCAGCATCG
ATACCAATTCATTGGCAGGACCAAGTGCACAAGGATCTCCTTCGTGACGA
AGCATTGGGTGTAATCGAGAGAGTCCCTTATGGCGAGCCAGTGAAATGGT
GTCACCGTATGGTAGTGACACGAAAGCACGATGGGTCCCCAAGGCGGACT
GTTGACCTATCTCCACTTAACAAACACTGTCAAAGAGAAACGTTTGCATC
TGCTTCACCATTCCAGTCAGCTAGAAGAGTACCAACCAACACGTGGAAGA
CTGTCAACGACGCATGGAAC Coding sequence (CDS) from alignment at scaffold_36:652031..654100 >TCONS_00061733 ID=TCONS_00061733|Name=TCONS_00061733|organism=Clytia hemisphaerica|type=CDS|length=2013bp|location=Sequence derived from alignment at scaffold_36:652031..654100 (Clytia hemisphaerica)
ATGGTTGAATTGCAATGTCCCGTACCTGGTTGTGAGTACCAAACACCAGC
GGGCTCATCTGAAACTGTGGCATGCACCTTGCTGTCGGCCAACAGTACAA
TCCACATGGGTGGTGGCCGTGCCCGCATCCCTTCTGGACCGAAATTGGAT
AGACCGAAAGTCGATAGTGGGTTGAACCAGGAAGAATGGAACCTATTTCT
TCGTCGTTGGGAAGCATTTGTTATTGGATCTGGCCTCGAAGCAAATAACT
GTTCCACTCAGCTGTTCCAATGTGCGAGCCAATCTCTTGGGGATAGTTTA
CTGCGTTCGAATCCTGGAATCATGAATCGCCCTACCAACGAGCTATTAGA
ATCAATGAAATCATTAGCTGTCGTAGCTGTTGCTACCTGTGTTACGAGAA
CTGAACTTATGAACATGCATCAGGAACGCGACGAACAATTTCGCATTTTC
TCCTCACGGGTTAGAGGAAAGGCAGAGACCTGTAATTACAAAACTAGATG
TACTTGCGATAACACAATTGACTTTACAGACTCTATTATAAGAGATGTTC
TAATTGCGGGTATCGAAGATTCTGACATCAGACGGGAAGTTCTTGGTATT
GCAAACATTCTCGAAACTTCTATAAATGACATTATTGCCCTTGTAGAGAG
CAAAGAGATGGCACGGGATGCACTGCCATCCTCAGTCGGGAACGTGTCCT
CGTCAACATATCGTCGACATAAGCCAAAGCAGACTGAGGCTACTCACGCT
GGAACACCGATTCCATGTCCTGGTTGTAGGAAGCCGTACCTACGTTTCAC
GGAGGGCAGGACAGGACGAAACAGAAAGCCACACAAGATGTGTATCGACT
GCTATCGAGCCAAACGTCGTCAAGAGAGATCTGACACCAACCAACAGCCT
CAACCTGGAGCATCCAATAGCGAGATAAGCACCGTCCCTATGTTTTCCCA
AGTGACTGGAATATCTACGCAACCAGATGTCACCAAATCTTCTAGAGCCA
CTCAGAATGCCATTCCGTTGCCTCACAACATCTTCTCCAAAGGGCAATGG
CGCAAATCAAGATTCAAGGAACACCCTAGGGTAGAACTCTTATTGTCCGT
TTTGTCTTCTGACTATAAACAATTTGGCAAAAGATGCCCTAGTATTGCCC
CATCTAAGATAATGGCACTTGCTGACACGGGTGCGCAATCATGTTTATGG
TCAATGGATGAGTTTGAATCGCTTGGGTTTACCAAGGATGACCTGATTCC
GGTCAGCATCAACCTCATGGCAGCCAATAAGTCTCCTATTAAAGTCGAGG
GGGCTGCACGTGTTCGTCTGGAGGGTACTGCATATGATGGCTCAAAACGG
TTGTGTGCTACAATGGTCTACATCAGCAGACAAGCCCAAGGATTTTACCT
TTCGCTGGAGAACATGATGGACCTTGGAATTGTACCTAAGGACTTTCCTG
CCATCAAACCCTCGTCTACTGTTCACCCTACCAATGCAGTGGTTGAAGAC
CTCATTCCAGAGGAGTCATGTTCCTGTCCTACTCGCACCACCATCCCCGA
ATTTCCAAAGGAGCTTCCATTTGAATGCATTCCAGAGAACAACGACAAGA
TGAAGGAGTGGCTGCTTGATTATTTTGCGTCGTCTACTTTCAATACCTGC
CCACACCAGCGGCTGCCACAAATGGATGGTCCACCGGTTGAGATCCATCT
TAAGCCTAACGCTGTTCCAAAAGCTGTGCACACTCCAGCATCGATACCAA
TTCATTGGCAGGACCAAGTGCACAAGGATCTCCTTCGTGACGAAGCATTG
GGTGTAATCGAGAGAGTCCCTTATGGCGAGCCAGTGAAATGGTGTCACCG
TATGGTAGTGACACGAAAGCACGATGGGTCCCCAAGGCGGACTGTTGACC
TATCTCCACTTAACAAACACTGTCAAAGAGAAACGTTTGCATCTGCTTCA
CCATTCCAGTCAGCTAGAAGAGTACCAACCAACACGTGGAAGACTGTCAA
CGACGCATGGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00061733-exon-scaffold_36-1491911889:652031..654100 | TCONS_00061733-exon-scaffold_36-1491911889:652031..654100 | Clytia hemisphaerica | exon |
| TCONS_00061733-exon-scaffold_36-1510915933:652031..654100 | TCONS_00061733-exon-scaffold_36-1510915933:652031..654100 | Clytia hemisphaerica | exon |
| TCONS_00061733-exon-scaffold_36-1575043694:652031..654100 | TCONS_00061733-exon-scaffold_36-1575043694:652031..654100 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| scaffold_36 | supercontig | scaffold_36:652031..654100 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR021109 | Peptidase_aspartic_dom |
Blast
The following BLAST results are available for this feature:
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